View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1063_low_30 (Length: 343)
Name: NF1063_low_30
Description: NF1063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1063_low_30 |
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Alignment Details
Target: chr6 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 65 - 332
Target Start/End: Original strand, 34038798 - 34039062
Alignment:
| Q |
65 |
taaaacttataaaagtgtaggatgaaattacatactttataggaagattgttcatgagctctgaaaaatcacataatgatccatttgaatgtgatgatga |
164 |
Q |
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| T |
34038798 |
taaaacatataaatatgtaggatgaaattacatacttcataggaagattgttcatgagctctgagaaatcacataatgatcctattgaatgtgatgatga |
34038897 |
T |
|
| Q |
165 |
agaagaagaatcagcatcctcagtcaaatcagatgaacaagaacacatagaattatttgaatcttctgagaatgttccaatggatgttgttgaatcacta |
264 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34038898 |
ag---aagaatcagcatcctcagtcaaatcagatgaacaagaacacatagaattatttgaatcttctgagaatgttccaatggatgttgttgaatcacta |
34038994 |
T |
|
| Q |
265 |
ttagtttccttaaccatccacttcatgtttcttgcactatcatcacccattattcccttcacattcat |
332 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34038995 |
ttagttttcttaaccatccacttcatgtttcttgcactatcatcacccattattcccttcacattcat |
34039062 |
T |
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