View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1063_low_32 (Length: 327)

Name: NF1063_low_32
Description: NF1063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1063_low_32
NF1063_low_32
[»] chr5 (47 HSPs)
chr5 (30-209)||(39854856-39855037)
chr5 (145-203)||(36402171-36402229)
chr5 (145-205)||(18511057-18511117)
chr5 (150-205)||(21289132-21289187)
chr5 (145-203)||(18467064-18467122)
chr5 (145-203)||(18469389-18469447)
chr5 (145-203)||(27910813-27910871)
chr5 (145-203)||(38959973-38960030)
chr5 (145-209)||(3372978-3373041)
chr5 (145-205)||(6745446-6745506)
chr5 (148-203)||(21948409-21948464)
chr5 (145-203)||(18597020-18597078)
chr5 (145-203)||(24127232-24127290)
chr5 (145-203)||(34530560-34530618)
chr5 (145-203)||(39798410-39798467)
chr5 (151-205)||(40221902-40221956)
chr5 (145-203)||(41585581-41585639)
chr5 (150-203)||(27912916-27912969)
chr5 (145-209)||(15354415-15354478)
chr5 (145-209)||(15356691-15356754)
chr5 (145-205)||(16092046-16092106)
chr5 (145-209)||(23665420-23665483)
chr5 (145-209)||(23741698-23741761)
chr5 (145-209)||(23793104-23793167)
chr5 (145-209)||(31179214-31179277)
chr5 (145-209)||(31465834-31465898)
chr5 (152-199)||(10474176-10474223)
chr5 (145-199)||(658205-658258)
chr5 (145-199)||(10587198-10587251)
chr5 (145-203)||(21684295-21684351)
chr5 (145-203)||(34476895-34476951)
chr5 (158-199)||(16776539-16776580)
chr5 (145-203)||(2724268-2724327)
chr5 (152-203)||(2818186-2818236)
chr5 (145-203)||(6756867-6756926)
chr5 (145-199)||(37705627-37705682)
chr5 (145-203)||(4410401-4410457)
chr5 (145-203)||(6747684-6747742)
chr5 (150-199)||(17818340-17818390)
chr5 (145-203)||(34479260-34479316)
chr5 (145-203)||(36208948-36209006)
chr5 (145-203)||(38882468-38882524)
chr5 (145-198)||(20505688-20505741)
chr5 (145-199)||(26098130-26098186)
chr5 (161-209)||(10750074-10750121)
chr5 (161-209)||(10757550-10757597)
chr5 (142-199)||(12555754-12555813)
[»] scaffold0011 (1 HSPs)
scaffold0011 (146-205)||(35978-36037)
[»] chr3 (60 HSPs)
chr3 (145-203)||(18096741-18096799)
chr3 (145-205)||(43423309-43423369)
chr3 (145-209)||(45883292-45883356)
chr3 (145-205)||(53915339-53915399)
chr3 (145-203)||(18099011-18099069)
chr3 (145-203)||(28101849-28101907)
chr3 (145-203)||(36012184-36012242)
chr3 (145-205)||(1313760-1313821)
chr3 (145-209)||(6065634-6065697)
chr3 (145-205)||(53917507-53917567)
chr3 (145-203)||(1321839-1321896)
chr3 (145-203)||(42990659-42990716)
chr3 (145-198)||(43421261-43421314)
chr3 (145-209)||(10621367-10621430)
chr3 (145-203)||(747119-747176)
chr3 (145-203)||(3315041-3315099)
chr3 (145-199)||(9604448-9604501)
chr3 (145-203)||(24980067-24980125)
chr3 (145-203)||(25533784-25533841)
chr3 (145-202)||(38210732-38210788)
chr3 (145-209)||(6063284-6063347)
chr3 (145-205)||(12267820-12267880)
chr3 (146-186)||(47701522-47701562)
chr3 (145-209)||(50494353-50494416)
chr3 (145-199)||(27635498-27635553)
chr3 (145-203)||(32219443-32219502)
chr3 (145-199)||(4103737-4103790)
chr3 (145-203)||(11168462-11168518)
chr3 (145-203)||(15781234-15781292)
chr3 (145-199)||(28181362-28181416)
chr3 (145-203)||(28412871-28412928)
chr3 (145-203)||(28761288-28761346)
chr3 (145-203)||(41849413-41849469)
chr3 (145-203)||(43226437-43226494)
chr3 (146-203)||(5192011-5192066)
chr3 (150-203)||(18163021-18163074)
chr3 (145-205)||(5522467-5522525)
chr3 (145-205)||(7606444-7606502)
chr3 (145-197)||(17795616-17795668)
chr3 (145-197)||(19104056-19104108)
chr3 (145-208)||(35917877-35917940)
chr3 (145-199)||(4308123-4308177)
chr3 (145-199)||(51674609-51674664)
chr3 (145-203)||(456268-456324)
chr3 (145-203)||(458645-458701)
chr3 (145-203)||(10084230-10084286)
chr3 (145-203)||(10955868-10955924)
chr3 (145-203)||(22114144-22114200)
chr3 (145-203)||(32263882-32263940)
chr3 (145-203)||(42992741-42992798)
chr3 (147-199)||(880087-880140)
chr3 (151-199)||(880302-880351)
chr3 (145-203)||(5886558-5886617)
chr3 (145-203)||(5900031-5900090)
chr3 (145-198)||(31151701-31151753)
chr3 (145-197)||(53468296-53468349)
chr3 (167-199)||(1626549-1626581)
chr3 (145-209)||(6484708-6484772)
chr3 (173-205)||(51943726-51943758)
chr3 (151-203)||(53893900-53893951)
[»] chr8 (33 HSPs)
chr8 (145-205)||(15073141-15073201)
chr8 (145-205)||(15068411-15068471)
chr8 (145-205)||(15956382-15956442)
chr8 (145-205)||(27827419-27827478)
chr8 (145-205)||(27829730-27829789)
chr8 (145-203)||(14477681-14477739)
chr8 (145-203)||(28283063-28283120)
chr8 (145-205)||(183249-183309)
chr8 (145-209)||(24873040-24873103)
chr8 (145-205)||(27106748-27106808)
chr8 (145-203)||(18811144-18811201)
chr8 (145-203)||(18813318-18813375)
chr8 (145-203)||(21482739-21482797)
chr8 (145-203)||(33541256-33541314)
chr8 (145-203)||(41383095-41383153)
chr8 (151-203)||(13858341-13858393)
chr8 (145-205)||(15185565-15185625)
chr8 (145-203)||(14808192-14808251)
chr8 (145-203)||(3883437-3883494)
chr8 (145-203)||(15809654-15809710)
chr8 (145-203)||(43530551-43530608)
chr8 (145-194)||(21480940-21480989)
chr8 (145-203)||(22684492-22684551)
chr8 (145-205)||(2467980-2468039)
chr8 (145-203)||(3874429-3874486)
chr8 (145-203)||(14419036-14419094)
chr8 (145-203)||(25952951-25953009)
chr8 (145-203)||(27911508-27911566)
chr8 (145-203)||(27957927-27957985)
chr8 (145-203)||(32339746-32339802)
chr8 (145-203)||(35872302-35872360)
chr8 (145-203)||(41385178-41385232)
chr8 (160-209)||(43082403-43082451)
[»] chr1 (54 HSPs)
chr1 (145-205)||(6995541-6995601)
chr1 (145-203)||(39462897-39462955)
chr1 (150-205)||(25251127-25251182)
chr1 (145-203)||(2949080-2949138)
chr1 (145-199)||(18839967-18840021)
chr1 (145-203)||(39932455-39932513)
chr1 (145-203)||(16429328-16429386)
chr1 (145-199)||(31422707-31422761)
chr1 (145-199)||(31424863-31424917)
chr1 (139-203)||(9459272-9459335)
chr1 (139-203)||(9463099-9463162)
chr1 (145-205)||(17185980-17186040)
chr1 (145-209)||(23786214-23786277)
chr1 (145-199)||(50078636-50078691)
chr1 (149-203)||(11457327-11457381)
chr1 (145-203)||(16226549-16226606)
chr1 (145-199)||(23816269-23816322)
chr1 (145-203)||(31490287-31490344)
chr1 (145-203)||(31735366-31735423)
chr1 (145-203)||(40134319-40134377)
chr1 (145-203)||(47906646-47906703)
chr1 (145-203)||(50307390-50307448)
chr1 (145-203)||(51757915-51757972)
chr1 (150-205)||(17324484-17324540)
chr1 (145-197)||(18307490-18307542)
chr1 (145-205)||(25248399-25248459)
chr1 (145-209)||(47177737-47177800)
chr1 (145-209)||(47180088-47180151)
chr1 (145-203)||(4131222-4131281)
chr1 (145-203)||(3579432-3579489)
chr1 (145-203)||(14097816-14097874)
chr1 (145-203)||(16231944-16232001)
chr1 (152-198)||(16432767-16432813)
chr1 (145-203)||(24326043-24326100)
chr1 (145-203)||(28206913-28206971)
chr1 (145-203)||(46431549-46431606)
chr1 (145-203)||(50248418-50248476)
chr1 (145-203)||(51750419-51750475)
chr1 (150-203)||(9240940-9240993)
chr1 (145-205)||(13215457-13215517)
chr1 (145-205)||(13358952-13359010)
chr1 (159-203)||(27336799-27336843)
chr1 (145-205)||(47452004-47452064)
chr1 (145-203)||(10399670-10399728)
chr1 (145-203)||(13762216-13762274)
chr1 (145-203)||(13447118-13447174)
chr1 (145-199)||(17319266-17319320)
chr1 (145-203)||(20291837-20291893)
chr1 (167-205)||(25860276-25860314)
chr1 (145-191)||(30780435-30780481)
chr1 (145-203)||(41647296-41647354)
chr1 (145-203)||(12302350-12302410)
chr1 (160-200)||(15823928-15823968)
chr1 (159-203)||(27338990-27339034)
[»] scaffold0005 (3 HSPs)
scaffold0005 (145-203)||(50398-50456)
scaffold0005 (145-203)||(52397-52455)
scaffold0005 (149-203)||(183487-183540)
[»] chr4 (54 HSPs)
chr4 (145-203)||(14787275-14787333)
chr4 (145-203)||(14789274-14789332)
chr4 (145-203)||(36921339-36921397)
chr4 (145-203)||(38928025-38928083)
chr4 (145-205)||(22800706-22800766)
chr4 (147-203)||(36919432-36919488)
chr4 (145-205)||(56030884-56030944)
chr4 (145-203)||(22802578-22802636)
chr4 (145-203)||(37089213-37089271)
chr4 (145-203)||(53405567-53405625)
chr4 (145-209)||(22780213-22780276)
chr4 (145-205)||(37312925-37312985)
chr4 (145-205)||(49088983-49089043)
chr4 (145-203)||(6765276-6765334)
chr4 (145-203)||(16453737-16453795)
chr4 (145-203)||(16455655-16455713)
chr4 (145-203)||(47868836-47868893)
chr4 (145-197)||(40091260-40091313)
chr4 (145-197)||(2891727-2891779)
chr4 (145-209)||(22782578-22782641)
chr4 (145-205)||(33415335-33415395)
chr4 (145-205)||(3824448-3824510)
chr4 (143-199)||(6133270-6133328)
chr4 (150-197)||(27499483-27499530)
chr4 (145-203)||(3937127-3937184)
chr4 (145-199)||(44599681-44599734)
chr4 (145-205)||(5101343-5101403)
chr4 (145-209)||(16931632-16931695)
chr4 (145-205)||(19096309-19096369)
chr4 (145-203)||(5635319-5635375)
chr4 (145-203)||(8631261-8631317)
chr4 (145-203)||(24348635-24348691)
chr4 (145-205)||(18311216-18311277)
chr4 (145-205)||(18409193-18409254)
chr4 (145-198)||(36378724-36378776)
chr4 (145-209)||(7941751-7941813)
chr4 (145-201)||(16933989-16934044)
chr4 (145-205)||(26085819-26085877)
chr4 (145-203)||(22046527-22046585)
chr4 (145-199)||(24889231-24889285)
chr4 (145-203)||(2484716-2484772)
chr4 (145-203)||(9173988-9174044)
chr4 (145-203)||(9176316-9176372)
chr4 (153-203)||(11435389-11435438)
chr4 (145-203)||(11437797-11437854)
chr4 (149-203)||(14633752-14633805)
chr4 (145-203)||(17662093-17662149)
chr4 (145-203)||(24446503-24446561)
chr4 (145-203)||(31849441-31849497)
chr4 (167-205)||(38270017-38270055)
chr4 (146-203)||(12395692-12395749)
chr4 (146-203)||(12400654-12400711)
chr4 (159-203)||(22044247-22044290)
chr4 (167-199)||(47563192-47563224)
[»] chr2 (25 HSPs)
chr2 (147-203)||(27105153-27105209)
chr2 (145-205)||(11739422-11739482)
chr2 (145-205)||(17849466-17849527)
chr2 (145-205)||(22287182-22287242)
chr2 (145-205)||(22874458-22874518)
chr2 (153-205)||(28196984-28197036)
chr2 (145-197)||(43623424-43623476)
chr2 (145-205)||(45238843-45238903)
chr2 (145-203)||(21520535-21520593)
chr2 (145-209)||(45332021-45332084)
chr2 (145-199)||(19007995-19008050)
chr2 (145-203)||(19501844-19501900)
chr2 (145-203)||(36558722-36558779)
chr2 (145-199)||(36560982-36561035)
chr2 (146-203)||(45279844-45279900)
chr2 (145-209)||(37962792-37962856)
chr2 (145-199)||(23871173-23871228)
chr2 (145-203)||(19504179-19504235)
chr2 (145-203)||(22162870-22162928)
chr2 (150-203)||(6258668-6258721)
chr2 (145-198)||(6263994-6264047)
chr2 (150-203)||(23452084-23452135)
chr2 (160-209)||(35215449-35215497)
chr2 (167-199)||(15539398-15539430)
chr2 (167-203)||(42923374-42923410)
[»] scaffold0031 (1 HSPs)
scaffold0031 (145-203)||(79572-79630)
[»] chr6 (30 HSPs)
chr6 (145-203)||(9020339-9020397)
chr6 (145-203)||(13057600-13057658)
chr6 (148-205)||(30728673-30728730)
chr6 (145-205)||(15540991-15541051)
chr6 (145-203)||(13040173-13040231)
chr6 (145-209)||(12195355-12195418)
chr6 (145-205)||(24338296-24338356)
chr6 (145-209)||(26065962-26066025)
chr6 (145-209)||(26068236-26068299)
chr6 (145-196)||(15367446-15367497)
chr6 (145-203)||(8717196-8717253)
chr6 (145-203)||(18322508-18322565)
chr6 (145-203)||(29754550-29754607)
chr6 (151-203)||(15346754-15346806)
chr6 (145-203)||(2628728-2628784)
chr6 (145-203)||(3629712-3629770)
chr6 (145-203)||(3631785-3631843)
chr6 (145-199)||(11982873-11982926)
chr6 (145-203)||(26932404-26932461)
chr6 (145-201)||(10584355-10584412)
chr6 (150-195)||(22491028-22491073)
chr6 (145-197)||(16455281-16455333)
chr6 (145-209)||(33309266-33309328)
chr6 (145-209)||(33311535-33311597)
chr6 (145-203)||(5273056-5273114)
chr6 (150-205)||(14466730-14466785)
chr6 (145-205)||(26065395-26065456)
chr6 (145-205)||(26085364-26085425)
chr6 (145-205)||(1069564-1069624)
chr6 (145-197)||(17012449-17012501)
[»] chr7 (46 HSPs)
chr7 (145-202)||(13099318-13099375)
chr7 (145-199)||(4295782-4295836)
chr7 (145-203)||(9027035-9027092)
chr7 (145-203)||(28485955-28486012)
chr7 (145-203)||(28487943-28488000)
chr7 (145-209)||(1606763-1606826)
chr7 (145-205)||(7092055-7092114)
chr7 (145-205)||(7094302-7094361)
chr7 (145-205)||(27306077-27306137)
chr7 (145-205)||(44724961-44725021)
chr7 (145-199)||(31434893-31434948)
chr7 (145-203)||(7471822-7471879)
chr7 (145-203)||(11759517-11759574)
chr7 (145-199)||(21678451-21678505)
chr7 (145-203)||(25542918-25542975)
chr7 (145-203)||(38394376-38394433)
chr7 (145-203)||(42223541-42223599)
chr7 (145-205)||(26804894-26804954)
chr7 (145-209)||(40550213-40550276)
chr7 (145-203)||(24748975-24749034)
chr7 (145-203)||(40836584-40836642)
chr7 (145-203)||(44954-45011)
chr7 (145-203)||(20297752-20297809)
chr7 (145-203)||(20626423-20626480)
chr7 (145-203)||(20630314-20630371)
chr7 (145-203)||(20642733-20642790)
chr7 (145-203)||(42330847-42330905)
chr7 (145-205)||(22394102-22394160)
chr7 (145-194)||(31153692-31153740)
chr7 (146-203)||(38397029-38397084)
chr7 (145-209)||(22137463-22137526)
chr7 (145-209)||(40552490-40552553)
chr7 (145-205)||(443981-444043)
chr7 (145-203)||(1049130-1049188)
chr7 (145-196)||(7469865-7469915)
chr7 (145-196)||(27832489-27832540)
chr7 (145-203)||(1850371-1850428)
chr7 (153-203)||(9679445-9679495)
chr7 (145-203)||(20299850-20299907)
chr7 (145-203)||(24465916-24465974)
chr7 (145-203)||(48458043-48458099)
chr7 (145-209)||(7349118-7349182)
chr7 (145-209)||(7351492-7351556)
chr7 (155-203)||(36019-36066)
chr7 (145-209)||(2935653-2935715)
chr7 (167-203)||(22251453-22251489)
[»] scaffold0472 (1 HSPs)
scaffold0472 (145-209)||(6582-6645)
[»] scaffold0127 (1 HSPs)
scaffold0127 (145-203)||(12716-12773)
[»] scaffold0025 (1 HSPs)
scaffold0025 (145-203)||(69134-69191)
[»] scaffold0045 (1 HSPs)
scaffold0045 (146-203)||(85614-85671)
[»] scaffold0004 (1 HSPs)
scaffold0004 (145-198)||(80251-80304)
[»] scaffold0140 (2 HSPs)
scaffold0140 (145-209)||(22500-22563)
scaffold0140 (145-209)||(24775-24838)
[»] scaffold0068 (1 HSPs)
scaffold0068 (145-203)||(29559-29615)
[»] scaffold0131 (2 HSPs)
scaffold0131 (150-186)||(15397-15433)
scaffold0131 (145-203)||(14232-14288)
[»] scaffold1899 (1 HSPs)
scaffold1899 (153-203)||(4-53)
[»] scaffold0267 (1 HSPs)
scaffold0267 (145-203)||(415-472)
[»] scaffold0250 (1 HSPs)
scaffold0250 (150-203)||(3268-3319)
[»] scaffold0154 (1 HSPs)
scaffold0154 (145-209)||(11315-11379)
[»] scaffold1674 (1 HSPs)
scaffold1674 (150-194)||(1298-1341)


Alignment Details
Target: chr5 (Bit Score: 128; Significance: 4e-66; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 30 - 209
Target Start/End: Complemental strand, 39855037 - 39854856
Alignment:
Q  30 atatttatgttgacttcttnnnnnnnnntatagtacacttttacatagaatacaagaatattcaaatattgaaattataaaaagaagagaataggtcacc 129  Q
    |||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  39855037 atatttatgttgacttcttaaaaaaaaatatagtacacttttacatagaatacaagaatattcaaatattgaaattataaaaagaagagaatatgtcacc 39854938  T
Q  130 taaataatgtc--ctcagttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||||||||||  ||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  39854937 taaataatgtcctctctgttgcgaattcgatgaaaaatcacaccaataataaacttgatatgtggagcaagggatagttaag 39854856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 36402171 - 36402229
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  36402171 gttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggata 36402229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 18511057 - 18511117
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||||||||||||||| |||| ||| |||||||||||||||| ||||||||||||||||||    
T  18511057 gttgcgaattcgatgataaatcacatcaataacaaacttgatgtgtggagcaagggatagt 18511117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 21289187 - 21289132
Alignment:
Q  150 gaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||    
T  21289187 gaattcgatgaaaaatcacaccaatatcaaacttgatgtgtggagcaagggatagt 21289132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 18467122 - 18467064
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| |||| ||||||||||||||| ||||||||||||||||    
T  18467122 gttgtgaattcgatgaaaaatcacactaataacaaacttgatgtgtggagcaagggata 18467064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 18469447 - 18469389
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| | |||||||||||||||||| ||||||||||||||||    
T  18469447 gttgtgaattcgatgaaaaatcataccaataacaaacttgatgtgtggagcaagggata 18469389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 27910871 - 27910813
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  27910871 gttgtgaattcgatgaaaaatcacaccaataacaaatttgatgtgtggagcaagggata 27910813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 38959973 - 38960030
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||    
T  38959973 gttgcgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggata 38960030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 3372978 - 3373041
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||| |||||||||||||||| ||||||||||| |||||||| |||||||||||||||| |||||    
T  3372978 gttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaag 3373041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 6745506 - 6745446
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||||||||||||||| |||  |||||||||||||||||||| ||||||||||| ||||||    
T  6745506 gttgcgaattcgatgagaaaacacaccaataacaaacttgatgtgtggagcaagagatagt 6745446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 21948464 - 21948409
Alignment:
Q  148 gcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||| |||  |||||||||||||||||||| ||||||||||||||||    
T  21948464 gcgaattcgatgagaaaacacaccaataacaaacttgatgtgtggagcaagggata 21948409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 18597078 - 18597020
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||| ||||||||||||||| |||||||||||||||||||| | ||||||||| ||||    
T  18597078 gttgcaaattcgatgaaaaatcacaccaataacaaacttgatgtatggagcaagtgata 18597020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 24127290 - 24127232
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| |||| |||||||||||| || ||||||||||||||||    
T  24127290 gttgtgaattcgatgaaaaatcacacaaataacaaacttaatgtgtggagcaagggata 24127232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 34530560 - 34530618
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| |||||||||||||||||||| ||| ||||||| ||||    
T  34530560 gttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtcgagcaagtgata 34530618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 39798467 - 39798410
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||||| ||||||||||| || ||||| ||||||||||||||||    
T  39798467 gttgcgaattcgatgaaaaatcacaccaataac-aatttgatgtgtggagcaagggata 39798410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 40221956 - 40221902
Alignment:
Q  151 aattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||| |||||||||| |||||||||||||||||||| |||||||||| |||||||    
T  40221956 aatttgatgaaaaatcacaccaataacaaacttgatgtgtggagcaaaggatagt 40221902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 41585581 - 41585639
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| |||||||||||||||||||| ||||| ||||| ||||    
T  41585581 gttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggggcaagagata 41585639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 27912969 - 27912916
Alignment:
Q  150 gaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||  ||||||||||||||||||| ||||||| ||||||||    
T  27912969 gaattcgatgaaaaatcccaccaataacaaacttgatgtgtggagtaagggata 27912916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 15354415 - 15354478
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||| |||||||| ||||||| ||||||||||| |||||||| |||||||||||||||| |||||    
T  15354415 gttgtgaattcgacgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaag 15354478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 15356691 - 15356754
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||| |||||||| ||||||| ||||||||||| |||||||| |||||||||||||||| |||||    
T  15356691 gttgtgaattcgacgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaag 15356754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 16092046 - 16092106
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||| ||||||||||| |||   |||||||||||||||||||||||||||||| |||||||    
T  16092046 gttgtgaattcgatgagaaaacgcaccaataacaaacttgatatgtggagcaatggatagt 16092106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 23665483 - 23665420
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||| |||||||| ||||||| ||||||||||||| |||||| |||||||||||||||| |||||    
T  23665483 gttgtgaattcgacgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaag 23665420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 23741698 - 23741761
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||| |||||||| ||||||| ||||||||||| |||||||| |||||||||||||||| |||||    
T  23741698 gttgtgaattcgacgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaag 23741761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 23793104 - 23793167
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||| |||||||| ||||||| ||||||||||| |||||||| |||||||||||||||| |||||    
T  23793104 gttgtgaattcgacgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaag 23793167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 31179214 - 31179277
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||| |||||||||||||||| ||||||||||| |||||||| | |||||||||||||| |||||    
T  31179214 gttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtatggagcaagggataattaag 31179277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 31465834 - 31465898
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||||||||| |||||||||| |||||||||||||| ||||| |||||| ||||| ||| |||||    
T  31465834 gttgcgaatttgatgaaaaatcacaccaataacaaatttgatgtgtggaacaaggaataattaag 31465898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 199
Target Start/End: Original strand, 10474176 - 10474223
Alignment:
Q  152 attcgatgaaaaattacaccaataacaaacttgatatgtggagcaagg 199  Q
    |||||||||||||||||| |||||| ||||||||| ||||||||||||    
T  10474176 attcgatgaaaaattacatcaataataaacttgatgtgtggagcaagg 10474223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 658205 - 658258
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagg 199  Q
    ||||||||||||||||||| | |||||||||||||| ||||| ||||||||||||    
T  658205 gttgcgaattcgatgaaaa-tcacaccaataacaaatttgatgtgtggagcaagg 658258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 10587251 - 10587198
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagg 199  Q
    |||| |||||||||||||| | |||||||||||||||||||| ||||||||||||    
T  10587251 gttgtgaattcgatgaaaa-tcacaccaataacaaacttgatgtgtggagcaagg 10587198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 21684295 - 21684351
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||||    
T  21684295 gttgcgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggata 21684351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 34476895 - 34476951
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||||    
T  34476895 gttgcgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggata 34476951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 199
Target Start/End: Complemental strand, 16776580 - 16776539
Alignment:
Q  158 tgaaaaattacaccaataacaaacttgatatgtggagcaagg 199  Q
    |||||||| |||||||||||||||||||| ||||||||||||    
T  16776580 tgaaaaatcacaccaataacaaacttgatgtgtggagcaagg 16776539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 2724327 - 2724268
Alignment:
Q  145 gttgcgaattcgatgaaaaatt-acaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||||||||| ||||||||| | |||||||||||||||||||| |||  |||||||||||    
T  2724327 gttgcgaatttgatgaaaaaatcacaccaataacaaacttgatgtgtatagcaagggata 2724268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 2818186 - 2818236
Alignment:
Q  152 attcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||||||||||||  |||||||||||||||||||| | ||||||||||||||    
T  2818186 attcgatgaaaaac-acaccaataacaaacttgatgtatggagcaagggata 2818236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 6756926 - 6756867
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataac-aaacttgatatgtggagcaagggata 203  Q
    |||||||||||||||| |||  ||||||||||| ||||||||| ||||||||||| ||||    
T  6756926 gttgcgaattcgatgagaaaacacaccaataacaaaacttgatgtgtggagcaagtgata 6756867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 37705627 - 37705682
Alignment:
Q  145 gttgcgaattcgatga-aaaattacaccaataacaaacttgatatgtggagcaagg 199  Q
    |||| ||||||||||| ||||  |||||||||||||||||||| ||||||||||||    
T  37705627 gttgtgaattcgatgagaaaaccacaccaataacaaacttgatgtgtggagcaagg 37705682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 4410457 - 4410401
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||||||||||| |||||| | ||||||||||||| |||||| ||||||||||||||||    
T  4410457 gttgcgaattcgttgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggata 4410401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 6747742 - 6747684
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||||||||| ||||| |||  |||||||||||||||||||| ||| ||||||| ||||    
T  6747742 gttgcgaattggatgagaaaacacaccaataacaaacttgatgtgtagagcaagagata 6747684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 17818340 - 17818390
Alignment:
Q  150 gaattcgatga-aaaattacaccaataacaaacttgatatgtggagcaagg 199  Q
    ||||||||||| ||||  |||||||||||||||||||| ||||||||||||    
T  17818340 gaattcgatgagaaaaccacaccaataacaaacttgatgtgtggagcaagg 17818390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 34479260 - 34479316
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||||||||| |||||||| | ||||||||||||| |||||| ||||||||||||||||    
T  34479260 gttgcgaatttgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggata 34479316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 36209006 - 36208948
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| ||| |||||| ||||||||| ||| ||||||| ||||    
T  36209006 gttgtgaattcgatgaaaaatcacatcaataataaacttgatgtgtagagcaagtgata 36208948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 38882524 - 38882468
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||| ||||| ||||||||||| |||||||| ||||||||||| ||||    
T  38882524 gttgcgaattcgatg-aaaatcacaccaataac-aacttgatgtgtggagcaagagata 38882468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 20505688 - 20505741
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaag 198  Q
    |||| |||||| |||| |||  |||||||||||||||||||| |||||||||||    
T  20505688 gttgtgaattcaatgagaaaacacaccaataacaaacttgatgtgtggagcaag 20505741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 26098130 - 26098186
Alignment:
Q  145 gttgcgaattcgatgaaaaa--ttacaccaataacaaacttgatatgtggagcaagg 199  Q
    |||||||||||||||| |||  | ||||||||| |||||||||| ||||||||||||    
T  26098130 gttgcgaattcgatgagaaaactcacaccaatatcaaacttgatgtgtggagcaagg 26098186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 10750121 - 10750074
Alignment:
Q  161 aaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    ||||| ||||||||||||| |||||| |||||||||||||||| |||||    
T  10750121 aaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaag 10750074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 10757597 - 10757550
Alignment:
Q  161 aaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    ||||| ||||||||||||| |||||| |||||||||||||||| |||||    
T  10757597 aaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaag 10757550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 12555754 - 12555813
Alignment:
Q  142 tcagttgcgaattcgatgaaaaa--ttacaccaataacaaacttgatatgtggagcaagg 199  Q
    ||||||| ||||||||||| |||  | |||||||||||||| ||||| ||||||||||||    
T  12555754 tcagttgtgaattcgatgagaaaactcacaccaataacaaatttgatgtgtggagcaagg 12555813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 146 - 205
Target Start/End: Complemental strand, 36037 - 35978
Alignment:
Q  146 ttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  36037 ttgcgaattcgatgaaaaattacaccaataacaaacttgatgtgtggagcaagggatagt 35978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 18096741 - 18096799
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18096741 gttgcgaattcgatgaaaaattacaccaataacaaacttgatgtgtggagcaagggata 18096799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 43423309 - 43423369
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  43423309 gttgcgaattcgatgaaaaattacaccaataacaaagttgatgtgtggagcaagggatagt 43423369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 45883356 - 45883292
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    ||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  45883356 gttgcaaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggatagttaag 45883292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 53915339 - 53915399
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    ||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||    
T  53915339 gttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtatggagcaagggatagt 53915399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 18099011 - 18099069
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  18099011 gttgggaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggata 18099069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 28101849 - 28101907
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  28101849 gttgtgaattcgatgaaaaattacaccaataataaacttgatgtgtggagcaagggata 28101907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 36012242 - 36012184
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||    
T  36012242 gttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtatggagcaagggata 36012184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 1313821 - 1313760
Alignment:
Q  145 gttgcgaattcgatgaaaaatt-acaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||    
T  1313821 gttgcgaattcgatgaaaaactcacaccaataacaaacttgatgtgtggagcaagggatagt 1313760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 6065634 - 6065697
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    ||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||| |||||    
T  6065634 gttgcgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaag 6065697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 53917507 - 53917567
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||||||| |||||||||||| |||| ||||||||||||||| ||||||||||||||||||    
T  53917507 gttgcgaaatcgatgaaaaatcacactaataacaaacttgatgtgtggagcaagggatagt 53917567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 1321896 - 1321839
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||    
T  1321896 gttgcgaattcgatgaaaa-tcacaccaataacaaacttgatgtgtggagcaagggata 1321839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 42990716 - 42990659
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||    
T  42990716 gttgcgaattcgatgaaaa-tcacaccaataacaaacttgatgtgtggagcaagggata 42990659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 43421261 - 43421314
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaag 198  Q
    ||||||||||||||||||||| |||||||||||||| ||||| |||||||||||    
T  43421261 gttgcgaattcgatgaaaaatcacaccaataacaaagttgatgtgtggagcaag 43421314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 10621367 - 10621430
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||| |||||||||||||||| ||||||||||| |||||||| |||||||||||||||| |||||    
T  10621367 gttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaag 10621430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 747176 - 747119
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||    
T  747176 gttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggata 747119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 3315099 - 3315041
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||||||||||||||| |||  |||||||||| ||||||||| ||||||||||||||||    
T  3315099 gttgcgaattcgatgagaaaacacaccaataataaacttgatgtgtggagcaagggata 3315041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 9604448 - 9604501
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagg 199  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||    
T  9604448 gttgcgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagg 9604501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 24980125 - 24980067
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| ||||||||||| |||  |||||||||||||||||||| ||||||||||||||||    
T  24980125 gttgtgaattcgatgagaaaacacaccaataacaaacttgatgtgtggagcaagggata 24980067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 25533841 - 25533784
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||    
T  25533841 gttgcgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagagata 25533784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 38210788 - 38210732
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggat 202  Q
    |||| |||||||||||||||| ||||||||||| |||||||| |||||||||||||||    
T  38210788 gttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggat 38210732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 6063284 - 6063347
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    ||||||||||||||||||||| ||||| ||||| |||||||| |||||| ||||||||| |||||    
T  6063284 gttgcgaattcgatgaaaaatcacaccgataac-aacttgatgtgtggaacaagggataattaag 6063347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 12267820 - 12267880
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||| ||| ||||||||||||||||||||||||||| ||||| ||||||||| || |||||    
T  12267820 gttgtgaactcgatgaaaaattacaccaataacaaatttgatgtgtggagcagggaatagt 12267880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 146 - 186
Target Start/End: Original strand, 47701522 - 47701562
Alignment:
Q  146 ttgcgaattcgatgaaaaattacaccaataacaaacttgat 186  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  47701522 ttgcgaattcgatgaaaaatcacaccaataacaaacttgat 47701562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 50494416 - 50494353
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||| |||||||||||||||| ||||||||||| |||||||| ||||||||||| |||| |||||    
T  50494416 gttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagagataattaag 50494353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 27635498 - 27635553
Alignment:
Q  145 gttgcgaattcgatga-aaaattacaccaataacaaacttgatatgtggagcaagg 199  Q
    ||||| |||||||||| ||||| |||||||||||||||||||| ||||||||||||    
T  27635498 gttgcaaattcgatgagaaaatcacaccaataacaaacttgatgtgtggagcaagg 27635553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 32219502 - 32219443
Alignment:
Q  145 gttgcgaattcgatgaaaaatt-acaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| ||||||||||||||| | |||| ||||||||||||||| ||||||||||||||||    
T  32219502 gttgtgaattcgatgaaaaaatcacacaaataacaaacttgatgtgtggagcaagggata 32219443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 4103737 - 4103790
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagg 199  Q
    ||||||||||||||||||| | ||||||||||||||||||||  |||||||||||    
T  4103737 gttgcgaattcgatgaaaa-tcacaccaataacaaacttgatgcgtggagcaagg 4103790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 11168518 - 11168462
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||||    
T  11168518 gttgcgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggata 11168462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 15781292 - 15781234
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||| ||||  |||||||||||||||||||| ||||||| ||||||||    
T  15781292 gttgtgaattcgatggaaaaacacaccaataacaaacttgatgtgtggagtaagggata 15781234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 28181416 - 28181362
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagg 199  Q
    |||| ||||||||  |||||| |||||||||||||||||||| ||||||||||||    
T  28181416 gttgtgaattcgaacaaaaatcacaccaataacaaacttgatgtgtggagcaagg 28181362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 28412871 - 28412928
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||  ||||||||||| |||||||| ||||||||||||||||    
T  28412871 gttgtgaattcgatgaaaaaacacaccaataac-aacttgatgtgtggagcaagggata 28412928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 28761288 - 28761346
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| |||||||||| || |||||| ||||||||||| ||||    
T  28761288 gttgtgaattcgatgaaaaatcacaccaataataatcttgatgtgtggagcaagtgata 28761346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 41849469 - 41849413
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||||    
T  41849469 gttgcgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggata 41849413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 43226494 - 43226437
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||||||||||||||| |||| ||||||||||| |||||||| ||||||||||| ||||    
T  43226494 gttgcgaattcgatgagaaatcacaccaataac-aacttgatgtgtggagcaagagata 43226437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 5192066 - 5192011
Alignment:
Q  146 ttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||||    
T  5192066 ttgcgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggata 5192011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 18163074 - 18163021
Alignment:
Q  150 gaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||||||||||||||| |||||||||| ||| ||||| ||||||| ||||||||    
T  18163074 gaattcgatgaaaaatcacaccaataataaatttgatgtgtggagtaagggata 18163021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 5522467 - 5522525
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||||||||||| |||||| | ||||||||||||| |||||| ||||||||||||||||||    
T  5522467 gttgcgaattcgttgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggatagt 5522525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 7606444 - 7606502
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    ||||| ||||||||||||||| ||||||||||||| |||||| ||||||||||| ||||||    
T  7606444 gttgcaaattcgatgaaaaat-acaccaataacaa-cttgatgtgtggagcaagagatagt 7606502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 17795668 - 17795616
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaa 197  Q
    |||| |||||||||||||||| |||||||||| ||| ||||| ||||||||||    
T  17795668 gttgtgaattcgatgaaaaatcacaccaataataaatttgatgtgtggagcaa 17795616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 19104108 - 19104056
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaa 197  Q
    |||| |||||||||||||||| |||||||||| ||| ||||| ||||||||||    
T  19104108 gttgtgaattcgatgaaaaatcacaccaataataaatttgatgtgtggagcaa 19104056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 35917877 - 35917940
Alignment:
Q  145 gttgcgaattcgatg-aaaaattacaccaataacaaacttgatatgtggagcaagggatagttaa 208  Q
    ||||||||||||||| |||||||||||||||||| |||||||| | |||| ||||||||| ||||    
T  35917877 gttgcgaattcgatgaaaaaattacaccaataac-aacttgatgtatggaacaagggataattaa 35917940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 4308123 - 4308177
Alignment:
Q  145 gttgcgaattcgatgaaaa-attacaccaataacaaacttgatatgtggagcaagg 199  Q
    ||||||||||||||||||| || ||||||||||| |||||||| ||||||||||||    
T  4308123 gttgcgaattcgatgaaaatatcacaccaataac-aacttgatgtgtggagcaagg 4308177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 51674609 - 51674664
Alignment:
Q  145 gttgcgaattcgatga-aaaattacaccaataacaaacttgatatgtggagcaagg 199  Q
    |||| ||||||||||| ||||| |||||||||||||||||||| | ||||||||||    
T  51674609 gttgtgaattcgatgagaaaatcacaccaataacaaacttgatgtatggagcaagg 51674664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 456324 - 456268
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||| | ||||||||||||| |||||| ||||||||||||||||    
T  456324 gttgtgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggata 456268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 458701 - 458645
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||| | ||||||||||||| |||||| ||||||||||||||||    
T  458701 gttgtgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggata 458645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 10084230 - 10084286
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||| ||||||||| | ||||||||||||| |||||| ||||||||||||||||    
T  10084230 gttgcgaatccgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggata 10084286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 10955868 - 10955924
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||| | ||||||||||||| |||||| ||||||||||||||||    
T  10955868 gttgtgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggata 10955924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 22114144 - 22114200
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||| | ||||||||| ||| |||||| ||||||||||||||||    
T  22114144 gttgcgaattcgatgaaaa-tcacaccaatagcaa-cttgatgtgtggagcaagggata 22114200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 32263882 - 32263940
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||| ||||||| |||| ||||||||| ||||| ||||||||||| ||||    
T  32263882 gttgtgaattcgaagaaaaatcacactaataacaaatttgatgtgtggagcaagtgata 32263940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 42992798 - 42992741
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||| | |||| ||||||||||||||| ||| ||||||||||||    
T  42992798 gttgtgaattcgatgaaaa-tcacactaataacaaacttgatgtgtagagcaagggata 42992741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 199
Target Start/End: Original strand, 880087 - 880140
Alignment:
Q  147 tgcgaattcgatgaaaaa-ttacaccaataacaaacttgatatgtggagcaagg 199  Q
    |||||||||||||||||| | |||||||||| ||||||||| ||||||| ||||    
T  880087 tgcgaattcgatgaaaaagtcacaccaataataaacttgatgtgtggagtaagg 880140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 880302 - 880351
Alignment:
Q  151 aattcgatgaaaaatt-acaccaataacaaacttgatatgtggagcaagg 199  Q
    |||||||||||||| | ||||| |||||||||||||| ||||||||||||    
T  880302 aattcgatgaaaaaatcacacccataacaaacttgatgtgtggagcaagg 880351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 5886617 - 5886558
Alignment:
Q  145 gttgcgaattcgatga--aaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||| ||  ||||| ||||||||||||| |||||| ||||||||||||||||    
T  5886617 gttgcgaattcgacgagaaaaatcacaccaataacaa-cttgatgtgtggagcaagggata 5886558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 5900090 - 5900031
Alignment:
Q  145 gttgcgaattcgatga--aaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||| ||  ||||| ||||||||||||| |||||| ||||||||||||||||    
T  5900090 gttgcgaattcgacgagaaaaatcacaccaataacaa-cttgatgtgtggagcaagggata 5900031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 198
Target Start/End: Complemental strand, 31151753 - 31151701
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaag 198  Q
    |||| |||||||||||||||| |||||||||| | ||||||| |||||||||||    
T  31151753 gttgtgaattcgatgaaaaatcacaccaataa-atacttgatgtgtggagcaag 31151701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 53468296 - 53468349
Alignment:
Q  145 gttgcgaattcgatga-aaaattacaccaataacaaacttgatatgtggagcaa 197  Q
    ||||| |||||||||| ||||  |||||||||||||||||||| ||||||||||    
T  53468296 gttgcaaattcgatgagaaaaccacaccaataacaaacttgatgtgtggagcaa 53468349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 199
Target Start/End: Original strand, 1626549 - 1626581
Alignment:
Q  167 acaccaataacaaacttgatatgtggagcaagg 199  Q
    |||||||||||||||||||| ||||||||||||    
T  1626549 acaccaataacaaacttgatgtgtggagcaagg 1626581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 6484772 - 6484708
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||| |||||| || |||||| |||| ||||||||| ||||| |||||||||||| ||| |||||    
T  6484772 gttgtgaattcaataaaaaatcacactaataacaaatttgatgtgtggagcaaggaataattaag 6484708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 205
Target Start/End: Complemental strand, 51943758 - 51943726
Alignment:
Q  173 ataacaaacttgatatgtggagcaagggatagt 205  Q
    |||||||||||||| ||||||||||||||||||    
T  51943758 ataacaaacttgatgtgtggagcaagggatagt 51943726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 53893900 - 53893951
Alignment:
Q  151 aattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||  ||||| ||||||||||||| |||||| ||||||||||||||||    
T  53893900 aattcgatcgaaaatcacaccaataacaa-cttgatgtgtggagcaagggata 53893951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 15073201 - 15073141
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  15073201 gttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggatagt 15073141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 15068471 - 15068411
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    ||||||||||||||||||||| ||||||| |||||||||||| |||||| |||||||||||    
T  15068471 gttgcgaattcgatgaaaaatcacaccaacaacaaacttgatgtgtggaacaagggatagt 15068411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 15956442 - 15956382
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||| |||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||    
T  15956442 gttgtgaattcgatgaaaaatcacatcaataacaaacttgatgtgtggagcaagggatagt 15956382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 27827478 - 27827419
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    ||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||    
T  27827478 gttgcgaattcgatgaaaa-tcacaccaataacaaacttgatgtgtggagcaagggatagt 27827419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 27829789 - 27829730
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    ||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||    
T  27829789 gttgcgaattcgatgaaaa-tcacaccaataacaaacttgatgtgtggagcaagggatagt 27829730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 14477739 - 14477681
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| |||||||||||||||||||| ||||||||||| ||||    
T  14477739 gttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagtgata 14477681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 28283063 - 28283120
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||    
T  28283063 gttgcgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggata 28283120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 183309 - 183249
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||| ||||||||||| |||  |||||||||||||||||||| ||||||||||||||||||    
T  183309 gttgtgaattcgatgagaaaacacaccaataacaaacttgatgtgtggagcaagggatagt 183249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 24873040 - 24873103
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||| |||||||||||||||| ||||||||||| |||||||| |||||||||||||||| |||||    
T  24873040 gttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaag 24873103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 27106748 - 27106808
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    ||||| |||||||||| |||  |||||||||||||||||||| ||||||||||||||||||    
T  27106748 gttgcaaattcgatgagaaaacacaccaataacaaacttgatgtgtggagcaagggatagt 27106808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 18811201 - 18811144
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||    
T  18811201 gttgcgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagagata 18811144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 18813375 - 18813318
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| ||||    
T  18813375 gttgcgaattcgatgaaaaatcacaccaataac-aacttgatatgtagagcaagagata 18813318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 21482797 - 21482739
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| |||||||||| ||||||||| ||||||||||| ||||    
T  21482797 gttgtgaattcgatgaaaaatcacaccaataataaacttgatgtgtggagcaagtgata 21482739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 33541256 - 33541314
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| ||||||||| |||||| |||||||||||||||||||| ||||||| ||||||||    
T  33541256 gttgtgaattcgatcaaaaatcacaccaataacaaacttgatgtgtggagtaagggata 33541314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 41383153 - 41383095
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||| ||||||||||||  |||||||||||||||||||| ||||||||||| ||||    
T  41383153 gttgcgagttcgatgaaaaaccacaccaataacaaacttgatgtgtggagcaagagata 41383095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 13858341 - 13858393
Alignment:
Q  151 aattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||| |||||||||| ||||||||| ||||||||||| ||||    
T  13858341 aattcgatgaaaaatcacaccaataagaaacttgatgtgtggagcaagtgata 13858393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 15185565 - 15185625
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||| ||||||| |||||||| ||| |||||||||||||||| ||||||| ||||||||||    
T  15185565 gttgtgaattcggtgaaaaatcacatcaataacaaacttgatgtgtggagtaagggatagt 15185625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 14808251 - 14808192
Alignment:
Q  145 gttgcgaattcgatgaaaaatt-acaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||||| ||||||||||||| | |||||||||||||||||||| |||||||||| |||||    
T  14808251 gttgcgcattcgatgaaaaaatcacaccaataacaaacttgatgtgtggagcaacggata 14808192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 3883437 - 3883494
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||||| ||| ||||||| |||||||| |||||||||| |||||    
T  3883437 gttgcgaattcgatgaaaaatcacatcaataac-aacttgatgtgtggagcaaaggata 3883494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 15809710 - 15809654
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||||    
T  15809710 gttgcgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggata 15809654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 43530608 - 43530551
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||| ||||||||| ||||||||||| |||||||| ||||||||||| ||||    
T  43530608 gttgcgaattcaatgaaaaatcacaccaataac-aacttgatgtgtggagcaagagata 43530551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 194
Target Start/End: Complemental strand, 21480989 - 21480940
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggag 194  Q
    |||| |||||||||||||||| |||||||||| ||||||||| |||||||    
T  21480989 gttgtgaattcgatgaaaaataacaccaataataaacttgatgtgtggag 21480940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 22684492 - 22684551
Alignment:
Q  145 gttgcgaattcgatg--aaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||||||||||||||  |||||| ||||||||||||| |||||| ||||||||||||||||    
T  22684492 gttgcgaattcgatggaaaaaatcacaccaataacaa-cttgatgtgtggagcaagggata 22684551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 2467980 - 2468039
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||| |||||||||||||| | |||||||||| ||||||||| ||||||||||| ||||||    
T  2467980 gttgtgaattcgatgaaaa-tcacaccaataataaacttgatgtgtggagcaagtgatagt 2468039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 3874486 - 3874429
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| ||||||| |||||||| ||||||||||| |||||||| ||||||||||| ||||    
T  3874486 gttgtgaattcgttgaaaaatcacaccaataac-aacttgatgtgtggagcaagagata 3874429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 14419036 - 14419094
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| ||||||||||| |||  |||||||||||||||||||| | ||||||||| ||||    
T  14419036 gttgtgaattcgatgagaaaacacaccaataacaaacttgatgtatggagcaagtgata 14419094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 25953009 - 25952951
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| ||||||||||| |||  |||||||||||||||||||| ||||||| ||| ||||    
T  25953009 gttgtgaattcgatgagaaaacacaccaataacaaacttgatgtgtggagaaagtgata 25952951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 27911566 - 27911508
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| ||||| | |||||||| |||||||||| ||||||||| ||||||||||| ||||    
T  27911566 gttgtgaatttgttgaaaaatcacaccaataaaaaacttgatgtgtggagcaagtgata 27911508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 27957985 - 27957927
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| ||||| | |||||||| |||||||||| ||||||||| ||||||||||| ||||    
T  27957985 gttgtgaatttgttgaaaaatcacaccaataaaaaacttgatgtgtggagcaagtgata 27957927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 32339802 - 32339746
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||| ||||| ||||||||||| |||||||| ||||| ||||||||||    
T  32339802 gttgcgaattcgatg-aaaatcacaccaataac-aacttgatgtgtggggcaagggata 32339746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 35872302 - 35872360
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| ||||||||||| |||  |||||||||||||||||||| |||| || ||||||||    
T  35872302 gttgtgaattcgatgagaaaacacaccaataacaaacttgatgtgtgaagtaagggata 35872360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 41385232 - 41385178
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||| ||||||||| |||| |||||||||||||    |||||||||||||||    
T  41385232 gttgcgaattccatgaaaaatcacacaaataacaaacttg----gtggagcaagggata 41385178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 43082451 - 43082403
Alignment:
Q  160 aaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||||| ||||||||||||| |||||| |||||||||||||||| |||||    
T  43082451 aaaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaag 43082403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 6995541 - 6995601
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  6995541 gttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggatagt 6995601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 39462955 - 39462897
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  39462955 gttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggata 39462897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 25251127 - 25251182
Alignment:
Q  150 gaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  25251127 gaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggatagt 25251182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 2949080 - 2949138
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  2949080 gttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggata 2949138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 18840021 - 18839967
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagg 199  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  18840021 gttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagg 18839967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 39932513 - 39932455
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  39932513 gttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggata 39932455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 16429386 - 16429328
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| |||||||||||||||||||| ||||||||||| ||||    
T  16429386 gttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagtgata 16429328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 31422707 - 31422761
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagg 199  Q
    ||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||    
T  31422707 gttgcgaattcgatgaaaaatcacatcaataacaaacttgatgtgtggagcaagg 31422761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 31424863 - 31424917
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagg 199  Q
    ||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||    
T  31424863 gttgcgaattcaatgaaaaatcacaccaataacaaacttgatgtgtggagcaagg 31424917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 9459272 - 9459335
Alignment:
Q  139 tcctcagttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||| |||| |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||    
T  9459272 tcctctgttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggata 9459335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 9463099 - 9463162
Alignment:
Q  139 tcctcagttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||| |||| |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||    
T  9463099 tcctctgttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggata 9463162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 17185980 - 17186040
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||| ||||| |||||||||| |||||||||| ||||||||||||||||||||| ||||||    
T  17185980 gttgtgaatttgatgaaaaatcacaccaataataaacttgatatgtggagcaagtgatagt 17186040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 23786277 - 23786214
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||| |||||||||||||||| ||||||||||| |||||||| |||||||||||||||| |||||    
T  23786277 gttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaag 23786214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 50078636 - 50078691
Alignment:
Q  145 gttgcgaattcgatga-aaaattacaccaataacaaacttgatatgtggagcaagg 199  Q
    |||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||    
T  50078636 gttgcgaattcgatgagaaaatcacaccaataacaaacttgatgtgtggagcaagg 50078691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 11457327 - 11457381
Alignment:
Q  149 cgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||| |||||||||||||||||||| |||| |||||| ||||    
T  11457327 cgaattcgatgaaaaatcacaccaataacaaacttgatgtgtgaagcaagtgata 11457381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 16226606 - 16226549
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||    
T  16226606 gttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggata 16226549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 23816322 - 23816269
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagg 199  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||    
T  23816322 gttgcgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagg 23816269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 31490344 - 31490287
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||||| |||||||| ||||||||||| ||||||||||| ||||    
T  31490344 gttgcgaattcgatgaaaaatcacaccaat-acaaacttgatgtgtggagcaagagata 31490287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 31735366 - 31735423
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||||||||||||||| |||||||||||||||| |||||||| ||||||||||| ||||    
T  31735366 gttgcgaattcgatgagaaattacaccaataac-aacttgatgtgtggagcaagagata 31735423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 40134377 - 40134319
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| ||| |||||||||||||||| ||||||||||| ||||    
T  40134377 gttgtgaattcgatgaaaaatcacatcaataacaaacttgatgtgtggagcaagtgata 40134319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 47906703 - 47906646
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||    
T  47906703 gttgcgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagagata 47906646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 50307390 - 50307448
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| |||||||||| ||||||||| | ||||||||||||||    
T  50307390 gttgggaattcgatgaaaaatcacaccaataataaacttgatgtctggagcaagggata 50307448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 51757972 - 51757915
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||    
T  51757972 gttgtgaattcgatgaaaaatgacaccaataac-aacttgatgtgtggagcaagggata 51757915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 17324484 - 17324540
Alignment:
Q  150 gaattcgatgaaaaatt-acaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    ||||||||||||||| | |||||||||||||||||||| ||||||| ||||||||||    
T  17324484 gaattcgatgaaaaactcacaccaataacaaacttgatgtgtggagtaagggatagt 17324540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 18307542 - 18307490
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaa 197  Q
    |||||||||||||||| ||| |||| |||||||||||||||| ||||||||||    
T  18307542 gttgcgaattcgatgagaaaatacatcaataacaaacttgatgtgtggagcaa 18307490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 25248399 - 25248459
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||| |||||||||||||||| ||| |||||||||||||||| ||||||| |||| |||||    
T  25248399 gttgtgaattcgatgaaaaatcacaacaataacaaacttgatgtgtggagtaaggaatagt 25248459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 47177800 - 47177737
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||| ||||||||| |||||| ||||||||||||| |||||| |||||||||||||||| |||||    
T  47177800 gttgtgaattcgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaag 47177737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 47180151 - 47180088
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||| ||||||||| |||||| ||||||||||||| |||||| |||||||||||||||| |||||    
T  47180151 gttgtgaattcgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaag 47180088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 4131222 - 4131281
Alignment:
Q  145 gttgcgaattcgatgaaaaatt-acaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||||||||||||||||||| | |||||||||||||||||||| || |||||||| ||||    
T  4131222 gttgcgaattcgatgaaaaactcacaccaataacaaacttgatgtgcggagcaagagata 4131281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 3579432 - 3579489
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||  |||||||||||||||||||| ||||||||||| ||||    
T  3579432 gttgtgaattcgatgaaaaac-acaccaataacaaacttgatgtgtggagcaagtgata 3579489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 14097816 - 14097874
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||| ||||||  |||||||||||||||||||| |||| |||||| ||||    
T  14097816 gttgcgaattcgaagaaaaaacacaccaataacaaacttgatgtgtgaagcaagagata 14097874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 16232001 - 16231944
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| ||||||||||| |||||||| |||||||||| |||||    
T  16232001 gttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaacggata 16231944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 16432813 - 16432767
Alignment:
Q  152 attcgatgaaaaattacaccaataacaaacttgatatgtggagcaag 198  Q
    |||||||||||||| |||||||||||||| ||||| |||||||||||    
T  16432813 attcgatgaaaaatcacaccaataacaaatttgatgtgtggagcaag 16432767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 24326100 - 24326043
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||    
T  24326100 gttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagtaagggata 24326043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 28206913 - 28206971
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| ||||||||||| |||  |||||||||||||||||||| ||||||||||| ||||    
T  28206913 gttgtgaattcgatgagaaaacacaccaataacaaacttgatgtgtggagcaagtgata 28206971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 46431549 - 46431606
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||||| ||||||||||| |||||||| | ||||||||| ||||    
T  46431549 gttgcgaattcgatgaaaaatcacaccaataac-aacttgatgtttggagcaagagata 46431606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 50248418 - 50248476
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| ||||||||||| |||| |||||||||||||| ||||| ||||||| ||||||||    
T  50248418 gttgtgaattcgatgataaatcacaccaataacaaatttgatgtgtggagtaagggata 50248476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 51750475 - 51750419
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||||||||||||| |||||| ||||||||||||| |||||| ||||||||||||||||    
T  51750475 gttgcgaattcgat-aaaaatcacaccaataacaa-cttgatgtgtggagcaagggata 51750419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 9240940 - 9240993
Alignment:
Q  150 gaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||| |||||| |||||||||||||||||||  ||||||||||| ||||    
T  9240940 gaattcgataaaaaatcacaccaataacaaacttgaagtgtggagcaagtgata 9240993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 13215517 - 13215457
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||| ||||||| ||| |||  |||||||||| ||||||||| ||||||||||||||||||    
T  13215517 gttgtgaattcgttgagaaaacacaccaataataaacttgatgtgtggagcaagggatagt 13215457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 13359010 - 13358952
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    ||||||||||||||| ||||| ||||||||||| |||||||| ||||||| ||||||||||    
T  13359010 gttgcgaattcgatg-aaaatcacaccaataac-aacttgatgtgtggagtaagggatagt 13358952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 27336799 - 27336843
Alignment:
Q  159 gaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||| ||| |||||||||||||||| ||||||||||||||||    
T  27336799 gaaaaatcacatcaataacaaacttgatgtgtggagcaagggata 27336843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 47452064 - 47452004
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||| |||||| ||||||||| ||| |||||||||| ||||| ||| ||||||||||||||    
T  47452064 gttgtgaattcaatgaaaaatcacatcaataacaaatttgatgtgtcgagcaagggatagt 47452004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 10399670 - 10399728
Alignment:
Q  145 gttgcgaattcgatgaaaa-attacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||| || ||||||||||| |||||||| ||||||||||| ||||    
T  10399670 gttgcgaattcgatgaaaatatcacaccaataac-aacttgatgtgtggagcaagagata 10399728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 13762274 - 13762216
Alignment:
Q  145 gttgcgaattcgatga-aaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||||||||||||||| ||||| ||||||||||| |||||||| ||||||| ||||||||    
T  13762274 gttgcgaattcgatgagaaaatcacaccaataac-aacttgatgtgtggagaaagggata 13762216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 13447118 - 13447174
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||| ||||| ||||||||||| |||||||| ||||||||||| ||||    
T  13447118 gttgcgaattcgatg-aaaatcacaccaataac-aacttgatgtgtggagcaagagata 13447174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 17319320 - 17319266
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagg 199  Q
    |||| ||||||||||||||||  ||||||||||||| ||||| ||||||| ||||    
T  17319320 gttgtgaattcgatgaaaaatcgcaccaataacaaatttgatgtgtggagtaagg 17319266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 20291893 - 20291837
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||| ||||| ||||||||||| |||||||| ||||||||||| ||||    
T  20291893 gttgcgaattcgatg-aaaatcacaccaataac-aacttgatgtgtggagcaagagata 20291837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 25860276 - 25860314
Alignment:
Q  167 acaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  25860276 acaccaatatcaaacttgatgtgtggagcaagggatagt 25860314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 30780481 - 30780435
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtg 191  Q
    |||| |||||||||||||| | |||||||||||||||||||| ||||    
T  30780481 gttgtgaattcgatgaaaactcacaccaataacaaacttgatgtgtg 30780435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 41647354 - 41647296
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| ||||||||||| |||  |||||||||||||||||||| || |||||||| ||||    
T  41647354 gttgtgaattcgatgagaaaacacaccaataacaaacttgatgtgcggagcaagtgata 41647296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 12302350 - 12302410
Alignment:
Q  145 gttgcgaattcgatgaaaaattacac--caataacaaacttgatatgtggagcaagggata 203  Q
    |||||||||||||| |||||  ||||  |||||||||||||||| ||||||||||| ||||    
T  12302350 gttgcgaattcgataaaaaaaaacacaccaataacaaacttgatgtgtggagcaagtgata 12302410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 15823968 - 15823928
Alignment:
Q  160 aaaaattacaccaataacaaacttgatatgtggagcaaggg 200  Q
    |||||| |||||||||||||||||||| ||||||| |||||    
T  15823968 aaaaatcacaccaataacaaacttgatgtgtggagtaaggg 15823928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 27338990 - 27339034
Alignment:
Q  159 gaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||| ||| |||||||||||||||| |||||| |||||||||    
T  27338990 gaaaaatcacatcaataacaaacttgatgtgtggaacaagggata 27339034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 51; Significance: 3e-20; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 50456 - 50398
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  50456 gttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggata 50398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 52455 - 52397
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  52455 gttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggata 52397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 183487 - 183540
Alignment:
Q  149 cgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||||||||||| |||| ||||||||||| |||||||| ||||||||||| ||||    
T  183487 cgaattcgatgagaaatcacaccaataac-aacttgatgtgtggagcaagagata 183540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 14787275 - 14787333
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  14787275 gttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggata 14787333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 14789274 - 14789332
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  14789274 gttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggata 14789332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 36921339 - 36921397
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  36921339 gttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggata 36921397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 38928025 - 38928083
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  38928025 gttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggata 38928083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 22800706 - 22800766
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    ||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||    
T  22800706 gttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtggggagcaagggatagt 22800766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 36919432 - 36919488
Alignment:
Q  147 tgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  36919432 tgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggata 36919488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 56030944 - 56030884
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||    
T  56030944 gttgcgaattcgatgaaaaatcacaccaataataaacttgatatgtggagcaagagatagt 56030884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 22802578 - 22802636
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  22802578 gttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggata 22802636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 37089213 - 37089271
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||    
T  37089213 gttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaatggata 37089271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 53405625 - 53405567
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||    
T  53405625 gttgcgaattcgatgaaaaatcacaccaataataaacttgatgtgtggagcaagggata 53405567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 22780213 - 22780276
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    ||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||| |||||    
T  22780213 gttgcgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaag 22780276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 37312925 - 37312985
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||||||||| |||||||||| |||||||||| ||||||||| ||||||||||||||||||    
T  37312925 gttgcgaatttgatgaaaaatcacaccaataataaacttgatgtgtggagcaagggatagt 37312985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 49089043 - 49088983
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||| ||| ||||||||||    
T  49089043 gttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgttgagtaagggatagt 49088983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 6765334 - 6765276
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| |||||||||||||||||||| ||||||| ||||||||    
T  6765334 gttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagtaagggata 6765276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 16453795 - 16453737
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| |||||||||||||||||||| ||||||||||| ||||    
T  16453795 gttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagtgata 16453737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 16455713 - 16455655
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| |||||||||||||||||||| ||||||||||| ||||    
T  16455713 gttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagtgata 16455655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 47868893 - 47868836
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||    
T  47868893 gttgcgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggata 47868836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 40091260 - 40091313
Alignment:
Q  145 gttgcgaattcgatgaaaaatt-acaccaataacaaacttgatatgtggagcaa 197  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  40091260 gttgcgaattcgatgaaaaattcacaccaataacaaacttgatgtgtggagcaa 40091313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 2891779 - 2891727
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaa 197  Q
    |||| |||||||||||||||| |||||||||||||||||||| ||||||||||    
T  2891779 gttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaa 2891727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 22782578 - 22782641
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    ||||||||||||| ||||||| ||||||||||| |||||||| |||||||||||||||| |||||    
T  22782578 gttgcgaattcgacgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaag 22782641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 33415335 - 33415395
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    ||||||||| |||||| |||| |||| ||||||||||||||| ||||||||||||||||||    
T  33415335 gttgcgaatccgatgagaaatcacacaaataacaaacttgatgtgtggagcaagggatagt 33415395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 3824448 - 3824510
Alignment:
Q  145 gttgcgaattcgatga--aaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||| |||||||||||  ||||| |||||||||||||||||||| ||||||||||||||||||    
T  3824448 gttgtgaattcgatgagaaaaatcacaccaataacaaacttgatgtgtggagcaagggatagt 3824510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 6133328 - 6133270
Alignment:
Q  143 cagttgcgaattcgatg--aaaaattacaccaataacaaacttgatatgtggagcaagg 199  Q
    |||||| ||||||||||  ||||||||||||||||||||||||||| ||||||||||||    
T  6133328 cagttgtgaattcgatggaaaaaattacaccaataacaaacttgatgtgtggagcaagg 6133270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 197
Target Start/End: Complemental strand, 27499530 - 27499483
Alignment:
Q  150 gaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaa 197  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||    
T  27499530 gaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaa 27499483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 3937127 - 3937184
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||||| ||||||||||| |||||||| || |||||||||||||    
T  3937127 gttgcgaattcgatgaaaaatcacaccaataac-aacttgatgtgaggagcaagggata 3937184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 44599681 - 44599734
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagg 199  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||    
T  44599681 gttgcgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagg 44599734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 5101403 - 5101343
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||| ||||||||||| |||  |||||||||||||||||||| |||||| |||||||||||    
T  5101403 gttgtgaattcgatgagaaaacacaccaataacaaacttgatgtgtggatcaagggatagt 5101343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 16931632 - 16931695
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||| |||||||||||||||| ||||||||||| ||||| || |||||||||||||||| |||||    
T  16931632 gttgtgaattcgatgaaaaatcacaccaataac-aacttaatgtgtggagcaagggataattaag 16931695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 19096369 - 19096309
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    ||||||||||||||||||||| |||| ||||| ||| ||||| ||||||| ||||||||||    
T  19096369 gttgcgaattcgatgaaaaatcacactaataataaatttgatgtgtggagtaagggatagt 19096309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 5635319 - 5635375
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||||    
T  5635319 gttgcgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggata 5635375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 8631261 - 8631317
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||||    
T  8631261 gttgcgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggata 8631317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 24348691 - 24348635
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||||    
T  24348691 gttgcgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggata 24348635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 18311216 - 18311277
Alignment:
Q  145 gttgcgaattcgatgaaaaatt-acaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||| ||||||||||||||| | |||||||||| ||||||||| ||||||||||| ||||||    
T  18311216 gttgtgaattcgatgaaaaaatcacaccaataataaacttgatgtgtggagcaagtgatagt 18311277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 18409193 - 18409254
Alignment:
Q  145 gttgcgaattcgatgaaaaatt-acaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||| ||||||||||||||| | |||||||||| ||||||||| ||||||||||| ||||||    
T  18409193 gttgtgaattcgatgaaaaaatcacaccaataataaacttgatgtgtggagcaagtgatagt 18409254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 198
Target Start/End: Complemental strand, 36378776 - 36378724
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaag 198  Q
    ||||||||||||||||||| | |||||||||| | |||||||||||||||||||    
T  36378776 gttgcgaattcgatgaaaa-tcacaccaataaaatacttgatatgtggagcaag 36378724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 7941813 - 7941751
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    ||||||||||||||||||| | ||||||| ||||| |||||| |||||||||||||||| |||||    
T  7941813 gttgcgaattcgatgaaaa-tcacaccaacaacaa-cttgatgtgtggagcaagggataattaag 7941751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 201
Target Start/End: Original strand, 16933989 - 16934044
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaaggga 201  Q
    |||| |||||||||||||||| ||||||||||| ||||| || ||||||||||||||    
T  16933989 gttgtgaattcgatgaaaaatcacaccaataac-aacttaatgtgtggagcaaggga 16934044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 26085819 - 26085877
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||||||||||||||| || | ||||||||||||| |||||| ||||||||||||||||||    
T  26085819 gttgcgaattcgatgagaa-tcacaccaataacaa-cttgatgtgtggagcaagggatagt 26085877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 22046527 - 22046585
Alignment:
Q  145 gttgcgaattcgat-gaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| ||||||||| ||||||| ||||||||||||| |||||| ||||||||||||||||    
T  22046527 gttgtgaattcgatcgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggata 22046585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 24889285 - 24889231
Alignment:
Q  145 gttgcgaattcgatgaaaa-attacaccaataacaaacttgatatgtggagcaagg 199  Q
    ||||||||||||||||||| || ||||||||||| |||||||| ||||||||||||    
T  24889285 gttgcgaattcgatgaaaatatcacaccaataac-aacttgatgtgtggagcaagg 24889231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 2484716 - 2484772
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||| | ||||||||||||| |||||| ||||||||||||||||    
T  2484716 gttgtgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggata 2484772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 9173988 - 9174044
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||| | |||| |||||||| |||||| ||||||||||||||||    
T  9173988 gttgcgaattcgatgaaaa-tcacactaataacaa-cttgatgtgtggagcaagggata 9174044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 9176316 - 9176372
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||| ||||| | ||||||||||||| |||||| ||||||||||||||||    
T  9176316 gttgcgaattcgacgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggata 9176372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 203
Target Start/End: Complemental strand, 11435438 - 11435389
Alignment:
Q  153 ttcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||| ||||||||||| |||||||| ||||||||||| ||||    
T  11435438 ttcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagagata 11435389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 11437854 - 11437797
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| ||||||||||| |||||||| | ||||||||| ||||    
T  11437854 gttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtatggagcaagagata 11437797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 14633805 - 14633752
Alignment:
Q  149 cgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||||||||||| |||| ||||||||||| |||||||| ||||||||||| ||||    
T  14633805 cgaattcgatgagaaatcacaccaataac-aacttgatgtgtggagcaagagata 14633752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 17662093 - 17662149
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||||||||||| |||||| | ||||||||||||| |||||| ||||||||||||||||    
T  17662093 gttgcgaattcgttgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggata 17662149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 24446503 - 24446561
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| ||||||||||| |||  |||||||||||||||||||| |||| || ||||||||    
T  24446503 gttgtgaattcgatgagaaaacacaccaataacaaacttgatgtgtgaagtaagggata 24446561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 31849441 - 31849497
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||| ||||| ||||||||||| |||||||| ||||||||||| ||||    
T  31849441 gttgcgaattcgatg-aaaatcacaccaataac-aacttgatgtgtggagcaagagata 31849497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 38270017 - 38270055
Alignment:
Q  167 acaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  38270017 acaccaataacaaacttgatgtgtggagtaagggatagt 38270055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 12395692 - 12395749
Alignment:
Q  146 ttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| ||||| |||| |||  |||||||||||||||||||| ||||||||||| ||||    
T  12395692 ttgcaaattcaatgagaaaacacaccaataacaaacttgatgtgtggagcaagtgata 12395749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 12400654 - 12400711
Alignment:
Q  146 ttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| ||||| |||| |||  |||||||||||||||||||| ||||||||||| ||||    
T  12400654 ttgcaaattcaatgagaaaacacaccaataacaaacttgatgtgtggagcaagtgata 12400711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 22044247 - 22044290
Alignment:
Q  159 gaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||| ||||||||||||| |||||| ||||||||||||||||    
T  22044247 gaaaaataacaccaataacaa-cttgatgtgtggagcaagggata 22044290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 199
Target Start/End: Complemental strand, 47563224 - 47563192
Alignment:
Q  167 acaccaataacaaacttgatatgtggagcaagg 199  Q
    |||||||||||||||||||| ||||||||||||    
T  47563224 acaccaataacaaacttgatgtgtggagcaagg 47563192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 5e-19; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 27105209 - 27105153
Alignment:
Q  147 tgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  27105209 tgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggata 27105153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 11739422 - 11739482
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||| |||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||    
T  11739422 gttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtagagcaagggatagt 11739482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 17849527 - 17849466
Alignment:
Q  145 gttgcgaattcgatgaaaaatt-acaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||| ||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||    
T  17849527 gttgtgaattcgatgaaaaaatcacaccaataacaaacttgatgtgtggagcaagggatagt 17849466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 22287182 - 22287242
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||| ||||||||||| |||  |||||||||||||||||||| ||||||||||||||||||    
T  22287182 gttgtgaattcgatgagaaaacacaccaataacaaacttgatgtgtggagcaagggatagt 22287242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 22874518 - 22874458
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||| |||||||||||||||| |||||||||| ||||||||| ||||||||||| ||||||    
T  22874518 gttgtgaattcgatgaaaaatcacaccaataataaacttgatgtgtggagcaagtgatagt 22874458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 28197036 - 28196984
Alignment:
Q  153 ttcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||||||||||||    
T  28197036 ttcgatgaaaaatcacaccaataacaaatttgatgtgtggagcaagggatagt 28196984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 43623424 - 43623476
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaa 197  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||||||||    
T  43623424 gttgcgaattcgatgaaaaatcacaccaataactaacttgatgtgtggagcaa 43623476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 45238843 - 45238903
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |||||| |||| ||||||    
T  45238843 gttgcgaattcgatgaaaaatcacaccaataataaacttgatgtgtggaccaagcgatagt 45238903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 21520535 - 21520593
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||||||||||||||| |||  |||||||||||||||||||| ||||||||||| ||||    
T  21520535 gttgcgaattcgatgagaaaacacaccaataacaaacttgatgtgtggagcaagtgata 21520593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 45332021 - 45332084
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||| |||||||||||||||| ||||||||||| |||||||| |||||| ||||||||| |||||    
T  45332021 gttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggaacaagggataattaag 45332084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 19008050 - 19007995
Alignment:
Q  145 gttgcgaattcgatgaaaaatt-acaccaataacaaacttgatatgtggagcaagg 199  Q
    |||| ||||||||||||||| | |||||||||||||||||||| ||||||||||||    
T  19008050 gttgtgaattcgatgaaaaaatcacaccaataacaaacttgatgtgtggagcaagg 19007995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 19501844 - 19501900
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||||    
T  19501844 gttgcgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggata 19501900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 36558722 - 36558779
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| ||||||||||  |||||||| ||||||||||||||||    
T  36558722 gttgtgaattcgatgaaaaatcacaccaataa-taacttgatgtgtggagcaagggata 36558779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 36560982 - 36561035
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagg 199  Q
    |||| |||||||||||||||| ||||||||||| |||||||| ||||||||||||    
T  36560982 gttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagg 36561035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 45279844 - 45279900
Alignment:
Q  146 ttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||| |||| ||||||||||| |||||||| ||||||||||| ||||    
T  45279844 ttgcgaattcgatgagaaatcacaccaataac-aacttgatgtgtggagcaagagata 45279900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 37962792 - 37962856
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||| |||||||||||||||| ||| |||||| ||||||||| ||||||| ||| |||| |||||    
T  37962792 gttgtgaattcgatgaaaaatcacatcaataataaacttgatgtgtggagtaagtgataattaag 37962856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 23871228 - 23871173
Alignment:
Q  145 gttgcgaattcgatga-aaaattacaccaataacaaacttgatatgtggagcaagg 199  Q
    ||||| |||||||||| |||| ||||||||||||||| ||||| ||||||||||||    
T  23871228 gttgcaaattcgatgagaaaactacaccaataacaaatttgatgtgtggagcaagg 23871173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 19504179 - 19504235
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||| | ||||||||||||| |||||| ||||||||||||||||    
T  19504179 gttgtgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggata 19504235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 22162870 - 22162928
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||||||||||||||| |||  |||||||||||||  ||||| |||| |||||||||||    
T  22162870 gttgcgaattcgatgagaaaacacaccaataacaattttgatgtgtgaagcaagggata 22162928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 6258668 - 6258721
Alignment:
Q  150 gaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||| |||  | |||||||||||||||||| ||||||||||| ||||    
T  6258668 gaattcgatgagaaaacataccaataacaaacttgatgtgtggagcaagtgata 6258721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 6263994 - 6264047
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaag 198  Q
    |||| ||||||||||| |||  |||| ||||||||||||||| |||||||||||    
T  6263994 gttgtgaattcgatgagaaaacacactaataacaaacttgatgtgtggagcaag 6264047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 23452084 - 23452135
Alignment:
Q  150 gaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||||||||||||| | ||||||||||||| |||||| ||||||||||||||||    
T  23452084 gaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggata 23452135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 35215449 - 35215497
Alignment:
Q  160 aaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||||| ||||||||||||| |||||| |||||||||||||||| |||||    
T  35215449 aaaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaag 35215497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 199
Target Start/End: Original strand, 15539398 - 15539430
Alignment:
Q  167 acaccaataacaaacttgatatgtggagcaagg 199  Q
    |||||||||||||||||||| ||||||||||||    
T  15539398 acaccaataacaaacttgatgtgtggagcaagg 15539430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 203
Target Start/End: Original strand, 42923374 - 42923410
Alignment:
Q  167 acaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  42923374 acaccaataacaaacttgatgtgtggagcaagagata 42923410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 79630 - 79572
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||    
T  79630 gttgcgaattcaatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggata 79572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 8e-18; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 9020397 - 9020339
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||    
T  9020397 gttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagagata 9020339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 13057658 - 13057600
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||    
T  13057658 gttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaaaggata 13057600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 30728673 - 30728730
Alignment:
Q  148 gcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    ||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||    
T  30728673 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtggagcaagggatagt 30728730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 15540991 - 15541051
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    ||||||| ||||||||||||| | |||||||||||||||||| ||||||||||||||||||    
T  15540991 gttgcgacttcgatgaaaaatcaaaccaataacaaacttgatgtgtggagcaagggatagt 15541051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 13040231 - 13040173
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||||| |||| ||||||||||||||| |||||||||| |||||    
T  13040231 gttgcgaattcgatgaaaaatcacactaataacaaacttgatgtgtggagcaatggata 13040173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 12195355 - 12195418
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||| |||||||||||||||| ||||||||||| |||||||| |||||||||||||||| |||||    
T  12195355 gttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaag 12195418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 24338296 - 24338356
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||| |||||||||||||||| ||| |||||||||||||||| ||||||||||| ||||||    
T  24338296 gttgtgaattcgatgaaaaatcacatcaataacaaacttgatgtgtggagcaagagatagt 24338356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 26065962 - 26066025
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||| |||||||||||||||| ||||||||||| |||||||| |||||||||||||||| |||||    
T  26065962 gttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaag 26066025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 26068236 - 26068299
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||| |||||||||||||||| ||||||||||| |||||||| |||||||||||||||| |||||    
T  26068236 gttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaag 26068299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 15367497 - 15367446
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagca 196  Q
    |||| |||||||||||||||| |||||||||||||||||||| |||||||||    
T  15367497 gttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagca 15367446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 8717196 - 8717253
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||    
T  8717196 gttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggata 8717253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 18322565 - 18322508
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||| ||||||||| ||||||||||| |||||||| ||||||||||||||||    
T  18322565 gttgcgaattctatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggata 18322508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 29754550 - 29754607
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||    
T  29754550 gttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggata 29754607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 15346806 - 15346754
Alignment:
Q  151 aattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||| |||||||||||||||||||| |||||| |||| ||||    
T  15346806 aattcgatgaaaaatcacaccaataacaaacttgatgtgtggaacaagtgata 15346754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 2628728 - 2628784
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||||    
T  2628728 gttgcgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggata 2628784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 3629712 - 3629770
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| ||||||||||| |||  |||||||||||||||||||| |||||||||| |||||    
T  3629712 gttgtgaattcgatgagaaaacacaccaataacaaacttgatgtgtggagcaaaggata 3629770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 3631785 - 3631843
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||  |||||||||||||||||||  ||||||||||| ||||    
T  3631785 gttgtgaattcgatgaaaaaacacaccaataacaaacttgacgtgtggagcaagtgata 3631843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 11982873 - 11982926
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagg 199  Q
    |||| |||||||||||||||| ||||||||||| |||||||| ||||||||||||    
T  11982873 gttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagg 11982926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 26932404 - 26932461
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| ||||| |||||||||| ||||||||||| |||||||| ||||||||||||||||    
T  26932404 gttgtgaatttgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggata 26932461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 10584412 - 10584355
Alignment:
Q  145 gttgcgaattcgatga-aaaattacaccaataacaaacttgatatgtggagcaaggga 201  Q
    |||| ||||||||||| ||||  |||||||||||||||||||| ||||||||||||||    
T  10584412 gttgtgaattcgatgagaaaaccacaccaataacaaacttgatgtgtggagcaaggga 10584355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 22491073 - 22491028
Alignment:
Q  150 gaattcgatgaaaaattacaccaataacaaacttgatatgtggagc 195  Q
    |||||||||||||||| ||||||||||||||||| || ||||||||    
T  22491073 gaattcgatgaaaaatcacaccaataacaaacttaatgtgtggagc 22491028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 16455281 - 16455333
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaa 197  Q
    |||| |||||||||||||||| | |||||||| | ||||||||||||||||||    
T  16455281 gttgtgaattcgatgaaaaatcaaaccaataaaatacttgatatgtggagcaa 16455333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 33309328 - 33309266
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||| |||||||||||||| | ||||||||||||| |||||| |||||||||||||||| |||||    
T  33309328 gttgtgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggataattaag 33309266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 33311597 - 33311535
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||| |||||||||||||| | ||||||||||||| |||||| |||||||||||||||| |||||    
T  33311597 gttgtgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggataattaag 33311535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 5273056 - 5273114
Alignment:
Q  145 gttgcgaattcgatgaaaaatt-acaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| ||||||||||||||| | ||||||||||||| |||||| ||||||||||||||||    
T  5273056 gttgtgaattcgatgaaaaaatcacaccaataacaa-cttgatgtgtggagcaagggata 5273114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 14466785 - 14466730
Alignment:
Q  150 gaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||||||||||||||| |||||||||| ||| ||||| |||| |||||| ||||||    
T  14466785 gaattcgatgaaaaatcacaccaataataaatttgatgtgtgcagcaagtgatagt 14466730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 26065456 - 26065395
Alignment:
Q  145 gttgcgaattcgatga--aaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||| |||||||||||  ||||| ||||||||||||| |||||| ||||||||||||||||||    
T  26065456 gttgtgaattcgatgagaaaaatcacaccaataacaa-cttgatgtgtggagcaagggatagt 26065395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 26085425 - 26085364
Alignment:
Q  145 gttgcgaattcgatga--aaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||| |||||||||||  ||||| ||||||||||||| |||||| ||||||||||||||||||    
T  26085425 gttgtgaattcgatgagaaaaatcacaccaataacaa-cttgatgtgtggagcaagggatagt 26085364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 1069564 - 1069624
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||| ||||||||||| ||| || |||||||||||| | ||| | ||||||||||||||||    
T  1069564 gttgtgaattcgatgagaaaatataccaataacaaattcgatgtatggagcaagggatagt 1069624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 17012501 - 17012449
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaa 197  Q
    |||| |||||||||||||||| ||| |||||| | ||||||| ||||||||||    
T  17012501 gttgtgaattcgatgaaaaatcacaacaataaaatacttgatgtgtggagcaa 17012449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 13099318 - 13099375
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggat 202  Q
    |||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  13099318 gttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggat 13099375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 4295782 - 4295836
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagg 199  Q
    ||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  4295782 gttgcaaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagg 4295836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 9027035 - 9027092
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||    
T  9027035 gttgcgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggata 9027092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 28486012 - 28485955
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  28486012 gttgtgaattcgatgaaaaatcacaccaataac-aacttgatatgtggagcaagggata 28485955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 28488000 - 28487943
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||    
T  28488000 gttgcgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggata 28487943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 1606826 - 1606763
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||| |||||||||||||||| ||||||||||| |||||||| |||||||||||||||| |||||    
T  1606826 gttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaag 1606763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 7092055 - 7092114
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    ||||| ||||||||||||| | |||||||||||||||||||| ||||||||||||||||||    
T  7092055 gttgcaaattcgatgaaaa-tcacaccaataacaaacttgatgtgtggagcaagggatagt 7092114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 7094302 - 7094361
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    ||||||||||||||||||| | |||||||||||||||||||| |||||||||||| |||||    
T  7094302 gttgcgaattcgatgaaaa-tcacaccaataacaaacttgatgtgtggagcaaggcatagt 7094361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 27306077 - 27306137
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||||||||||||||| | || |||||||||||||||||||| |||||| |||||||||||    
T  27306077 gttgcgaattcgatgagagatcacaccaataacaaacttgatgtgtggaacaagggatagt 27306137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 44725021 - 44724961
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||||||||||||||  |||  |||||||||||||||||||| ||||||||||||||||||    
T  44725021 gttgcgaattcgatgggaaaacacaccaataacaaacttgatgtgtggagcaagggatagt 44724961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 31434893 - 31434948
Alignment:
Q  145 gttgcgaattcgatga-aaaattacaccaataacaaacttgatatgtggagcaagg 199  Q
    |||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||    
T  31434893 gttgcgaattcgatgagaaaatcacaccaataacaaacttgatgtgtggagcaagg 31434948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 7471822 - 7471879
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||| ||||||||| ||||||||||| |||||||| ||||||||||||||||    
T  7471822 gttgcgaattcaatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggata 7471879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 11759574 - 11759517
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||    
T  11759574 gttgcgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagagata 11759517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 21678505 - 21678451
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagg 199  Q
    |||| |||||||||||||||| ||||| |||||||||||||| ||||||||||||    
T  21678505 gttgtgaattcgatgaaaaatcacaccgataacaaacttgatttgtggagcaagg 21678451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 25542975 - 25542918
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||    
T  25542975 gttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggata 25542918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 38394433 - 38394376
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||    
T  38394433 gttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggata 38394376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 42223599 - 42223541
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||||||||||||| |||||  |||||||||||||||||||| ||||||| ||||||||    
T  42223599 gttgcgaattcgataaaaaaacacaccaataacaaacttgatgtgtggagtaagggata 42223541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 26804954 - 26804894
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||||||||| ||||| |||| |||||||||||||| ||||| |||||||||| |||||||    
T  26804954 gttgcgaatttgatgagaaatcacaccaataacaaatttgatgtgtggagcaaaggatagt 26804894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 40550276 - 40550213
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||| |||||||| ||||||| ||||||||||||| |||||| |||||||||||||||| |||||    
T  40550276 gttgtgaattcgacgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaag 40550213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 24749034 - 24748975
Alignment:
Q  145 gttgcgaattcgatga-aaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| ||||||||||| ||||  |||||||||||||||||||| ||||||||||||||||    
T  24749034 gttgtgaattcgatgagaaaaccacaccaataacaaacttgatgtgtggagcaagggata 24748975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 40836584 - 40836642
Alignment:
Q  145 gttgcgaattcgat-gaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||||||||||||| ||||||| ||||||||||||| |||||| ||||||||||||||||    
T  40836584 gttgcgaattcgatcgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggata 40836642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 45011 - 44954
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||||||||||||||| |||| ||||||||||| |||||||| |||||||||| |||||    
T  45011 gttgcgaattcgatgagaaatcacaccaataac-aacttgatgtgtggagcaatggata 44954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 20297809 - 20297752
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||    
T  20297809 gttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagagata 20297752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 20626480 - 20626423
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||||| ||||||||||| ||| |||| ||||||||||| ||||    
T  20626480 gttgcgaattcgatgaaaaatcacaccaataac-aacctgatgtgtggagcaagagata 20626423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 20630371 - 20630314
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||||| ||||||||||| ||| |||| ||||||||||| ||||    
T  20630371 gttgcgaattcgatgaaaaatcacaccaataac-aacctgatgtgtggagcaagagata 20630314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 20642790 - 20642733
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||||| ||||||||||| ||| |||| ||||||||||| ||||    
T  20642790 gttgcgaattcgatgaaaaatcacaccaataac-aacctgatgtgtggagcaagagata 20642733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 42330847 - 42330905
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||||||||||||||| |||| || ||||||| ||||||||| |||||||||| |||||    
T  42330847 gttgcgaattcgatgagaaatcacgccaataataaacttgatgtgtggagcaatggata 42330905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 22394160 - 22394102
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||| ||||||||||||||||| ||||||||| |||||||  |||||||||||| ||||||    
T  22394160 gttgtgaattcgatgaaaaattccaccaataataaacttg--atgtggagcaagtgatagt 22394102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 31153692 - 31153740
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggag 194  Q
    ||||||||||||||||||||| ||||||||||| |||||||| |||||||    
T  31153692 gttgcgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggag 31153740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 38397084 - 38397029
Alignment:
Q  146 ttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||||    
T  38397084 ttgcgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggata 38397029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 22137526 - 22137463
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||| |||||||| ||||||| ||||||||||| |||||||| ||||||||||| |||| |||||    
T  22137526 gttgtgaattcgacgaaaaatcacaccaataac-aacttgatgtgtggagcaagagataattaag 22137463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 40552553 - 40552490
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||| |||||||| ||||||| ||||||||||| |||||||| ||||||||||| |||| |||||    
T  40552553 gttgtgaattcgacgaaaaatcacaccaataac-aacttgatgtgtggagcaagagataattaag 40552490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 444043 - 443981
Alignment:
Q  145 gttgcgaattcgatgaaaaa--ttacaccaataacaaacttgatatgtggagcaagggatagt 205  Q
    |||| ||||||||||| |||  | |||||||||||||||||||| |||||||||||| |||||    
T  444043 gttgtgaattcgatgagaaaactcacaccaataacaaacttgatgtgtggagcaaggaatagt 443981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 1049130 - 1049188
Alignment:
Q  145 gttgcgaattcgatgaaaaatt-acaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||| |||||||| ||||||||||| |||||||| ||||||||||| ||||    
T  1049130 gttgcgaattcgaagaaaaattcacaccaataac-aacttgatgtgtggagcaagagata 1049188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 7469865 - 7469915
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagca 196  Q
    ||||||||||||||||||||| ||||||||||| || ||||| |||||||||    
T  7469865 gttgcgaattcgatgaaaaatcacaccaataac-aatttgatgtgtggagca 7469915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 27832489 - 27832540
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagca 196  Q
    |||| |||||||||||||||| | ||||||||||||||| || |||||||||    
T  27832489 gttgtgaattcgatgaaaaatcataccaataacaaacttaatgtgtggagca 27832540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 1850428 - 1850371
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||   |||| ||||||||||||| |||||| ||||||||||||||||    
T  1850428 gttgcgaattcgatttgaaatcacaccaataacaa-cttgatgtgtggagcaagggata 1850371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 203
Target Start/End: Complemental strand, 9679495 - 9679445
Alignment:
Q  153 ttcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||||||| |||  |||||||||||||||||||| ||||||||||| ||||    
T  9679495 ttcgatgagaaaacacaccaataacaaacttgatgtgtggagcaagtgata 9679445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 20299907 - 20299850
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| ||||| |||||||||| ||||||||||| |||||||| ||||||||||| ||||    
T  20299907 gttgtgaatttgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagagata 20299850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 24465974 - 24465916
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| |||||||||| ||| ||||| |||||| |||| ||||    
T  24465974 gttgtgaattcgatgaaaaatcacaccaataataaatttgatgtgtggaacaagtgata 24465916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 48458099 - 48458043
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||| ||||| ||||||||||| |||||||| ||||||||||| ||||    
T  48458099 gttgcgaattcgatg-aaaatcacaccaataac-aacttgatgtgtggagcaagagata 48458043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 7349118 - 7349182
Alignment:
Q  145 gttgcgaattcgatg-aaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||| |||||||||| |||||| ||||||||||| |||||||| ||||||| |||||||| |||||    
T  7349118 gttgtgaattcgatgaaaaaatcacaccaataac-aacttgatgtgtggagtaagggataattaag 7349182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 7351492 - 7351556
Alignment:
Q  145 gttgcgaattcgatg-aaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||| |||||||||| |||||| ||||||||||| |||||||| ||||||| |||||||| |||||    
T  7351492 gttgtgaattcgatgaaaaaatcacaccaataac-aacttgatgtgtggagtaagggataattaag 7351556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 36066 - 36019
Alignment:
Q  155 cgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||||| |||| ||||||||||||| |||||| ||||||||||||||||    
T  36066 cgatgagaaatcacaccaataacaa-cttgatgtgtggagcaagggata 36019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 2935715 - 2935653
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||| |||||||||||||| | ||||||||||||| |||||| |||| ||||||||||| |||||    
T  2935715 gttgtgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtgaagcaagggataattaag 2935653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 203
Target Start/End: Original strand, 22251453 - 22251489
Alignment:
Q  167 acaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  22251453 acaccaataacaaacttgatgtgttgagcaagggata 22251489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 6645 - 6582
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||| |||||||||||||||| ||||||||||| |||||||| |||||||||||||||| |||||    
T  6645 gttgtgaattcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagggataattaag 6582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 12716 - 12773
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||    
T  12716 gttgtgaattcgatgaaaaatgacaccaataac-aacttgatgtgtggagcaagggata 12773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 69134 - 69191
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||| | |||||||||||||||||||| ||||||||||||||||    
T  69134 gttgtgaattcgatgaaaa-tcacaccaataacaaacttgatgtgtggagcaagggata 69191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 85671 - 85614
Alignment:
Q  146 ttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||||||||||||||||||| ||||||||||||| ||| || ||||||||||| ||||    
T  85671 ttgcgaattcgatgaaaaatcacaccaataacaatcttaatgtgtggagcaagagata 85614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 198
Target Start/End: Complemental strand, 80304 - 80251
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaag 198  Q
    |||||||||||||||| |||  |||||||||||||||||||| |||||||||||    
T  80304 gttgcgaattcgatgagaaaacacaccaataacaaacttgatgtgtggagcaag 80251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 22563 - 22500
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||| |||||||| ||||||| ||||||||||||| |||||| |||||||||||||||| |||||    
T  22563 gttgtgaattcgacgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaag 22500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 24838 - 24775
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    |||| |||||||| ||||||| ||||||||||||| |||||| |||||||||||||||| |||||    
T  24838 gttgtgaattcgacgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaag 24775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 29615 - 29559
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||||    
T  29615 gttgcgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggata 29559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 15433 - 15397
Alignment:
Q  150 gaattcgatgaaaaattacaccaataacaaacttgat 186  Q
    |||||||||||||||| ||||||||||||||||||||    
T  15433 gaattcgatgaaaaatcacaccaataacaaacttgat 15397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 14232 - 14288
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| |||||||||||||| | ||||||||||||| |||||| ||||||||||||||||    
T  14232 gttgtgaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggata 14288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1899 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1899
Description:

Target: scaffold1899; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 203
Target Start/End: Complemental strand, 53 - 4
Alignment:
Q  153 ttcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    ||||||||||||| ||||||||||| |||||||| ||||||||||| ||||    
T  53 ttcgatgaaaaatcacaccaataac-aacttgatgtgtggagcaagagata 4  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 472 - 415
Alignment:
Q  145 gttgcgaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||| ||||||| ||| |||| ||||||||||||| |||||| ||||||||||||||||    
T  472 gttgtgaattcgttgagaaatcacaccaataacaa-cttgatgtgtggagcaagggata 415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 3319 - 3268
Alignment:
Q  150 gaattcgatgaaaaattacaccaataacaaacttgatatgtggagcaagggata 203  Q
    |||||||||||||| | ||||||||||||| |||||| ||||||||||||||||    
T  3319 gaattcgatgaaaa-tcacaccaataacaa-cttgatgtgtggagcaagggata 3268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 11315 - 11379
Alignment:
Q  145 gttgcgaattcgatgaaaa-attacaccaataacaaacttgatatgtggagcaagggatagttaag 209  Q
    ||||||||||||||||||| || ||||||||||| |||||||| ||||||| |||| ||| |||||    
T  11315 gttgcgaattcgatgaaaatatcacaccaataac-aacttgatgtgtggagtaaggaataattaag 11379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 1298 - 1341
Alignment:
Q  150 gaattcgatgaaaaattacaccaataacaaacttgatatgtggag 194  Q
    |||||||||||||||| ||||||||||| |||||||| |||||||    
T  1298 gaattcgatgaaaaatcacaccaataac-aacttgatgtgtggag 1341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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