View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1063_low_35 (Length: 315)
Name: NF1063_low_35
Description: NF1063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1063_low_35 |
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Alignment Details
Target: chr6 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 5024461 - 5024286
Alignment:
| Q |
1 |
cttcaaaattgatgcaatcctcaaaagttcctcgagtcatcaatggagaaaacaacaacaactccggcgttatggcagagactaggagtccaagactaca |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
5024461 |
cttcaaaattgatgcaatcctcaaaagttcctcgagtcatcaatggagaaaacaacaccaactccggcgttatggcagagactaggagtccaagactaca |
5024362 |
T |
|
| Q |
101 |
aaagaagttcggtttggagagacgttccccaccaaccagcccaaaatcagatatcagcagtaacagaagacaacaa |
176 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5024361 |
aaagaagttcggtttggagagacgttccccaccaaccagcccaaaatcagatatcagcagtaacagaagacaacaa |
5024286 |
T |
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