View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1063_low_57 (Length: 211)

Name: NF1063_low_57
Description: NF1063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1063_low_57
NF1063_low_57
[»] chr8 (1 HSPs)
chr8 (1-59)||(26925493-26925551)


Alignment Details
Target: chr8 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 26925551 - 26925493
Alignment:
1 accggactgtgttgttgagtttatgatggaactagcggatgcatcactgcacttcttaa 59  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
26925551 accggactgtgttgttgagtttatgatggaactagcggatgcatcaccgcacttcttaa 26925493  T

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