View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10640_low_13 (Length: 277)
Name: NF10640_low_13
Description: NF10640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10640_low_13 |
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Alignment Details
Target: chr3 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 50605030 - 50605288
Alignment:
| Q |
1 |
acagttggaaatatttattattcatttactcctctttcaaatgtggcagttgagaaatattgaaatttgaaatcaacctttcatccttcactatataata |
100 |
Q |
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| T |
50605030 |
acagttggaaatatttattattcatttactcctctttcaaatgtggcagttgagaaatattgaaatttgaaatcaacctttcatccttcactatataata |
50605129 |
T |
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| Q |
101 |
taacctcactactccttccttcaatactacacattcattaagttcgctaacaatgagagttttttctaatggcgttgtggttgctttcatcctgtgcaat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50605130 |
taacctcactactccttccttcaatactacacattcattaagttcactaacaatgagagttttttctaatggcgttgtggttgctttcatcctgtgcaat |
50605229 |
T |
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| Q |
201 |
attctacttgtcactggcttgtttgaagtggcggatggtagacaagttaaggatgataa |
259 |
Q |
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| T |
50605230 |
attctacttgtcactggcttgtttgaagtggcggatggtagacaagttaaggatgataa |
50605288 |
T |
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