View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10640_low_15 (Length: 264)
Name: NF10640_low_15
Description: NF10640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10640_low_15 |
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Alignment Details
Target: chr4 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 294862 - 294611
Alignment:
| Q |
1 |
ttatcattattcatacccatatccattaaatgagaaattcgaagtgtaaccatttacctaaatcagcctccccacatctatcatttatcattgaattggt |
100 |
Q |
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| T |
294862 |
ttatcattattcatacccatatccattaaatgagaaattcaaagtgtaaccatttacctaaatcaacctccccacgtttatcatttatcattgaattggt |
294763 |
T |
|
| Q |
101 |
gtgggtttggcttggacatcataacttattagttgaatagttgaactctaagac-------gatagtttctatttgatcatagaaaaagataattgttat |
193 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |
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| T |
294762 |
gtgggtttggcttggacatcataacttattagttgaatagttgaactctaagacggtggtggatagtttctatttgatcata-aaaaagataattgttat |
294664 |
T |
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| Q |
194 |
tttgatttattattcatgtttgtatttgttctgtatc-ttttttaatctaaac |
245 |
Q |
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|||||||||||||||||||||||||||||||||| || ||||||||||||||| |
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| T |
294663 |
tttgatttattattcatgtttgtatttgttctgtgtctttttttaatctaaac |
294611 |
T |
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