View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10641_low_14 (Length: 331)

Name: NF10641_low_14
Description: NF10641
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10641_low_14
NF10641_low_14
[»] chr5 (60 HSPs)
chr5 (11-327)||(21518837-21519153)
chr5 (13-326)||(19475684-19475988)
chr5 (16-326)||(23404129-23404439)
chr5 (14-326)||(20560080-20560383)
chr5 (14-231)||(24928332-24928540)
chr5 (14-183)||(22155062-22155222)
chr5 (14-183)||(40398914-40399074)
chr5 (14-183)||(27605571-27605731)
chr5 (14-183)||(31841960-31842120)
chr5 (102-183)||(37732180-37732261)
chr5 (14-207)||(20788520-20788701)
chr5 (102-183)||(14449251-14449332)
chr5 (102-183)||(15767320-15767401)
chr5 (102-183)||(17727486-17727567)
chr5 (102-183)||(27044452-27044533)
chr5 (149-327)||(34060285-34060463)
chr5 (102-183)||(35224039-35224120)
chr5 (102-183)||(36696262-36696343)
chr5 (11-327)||(17448935-17449242)
chr5 (102-177)||(17615635-17615710)
chr5 (102-177)||(31357109-31357184)
chr5 (102-206)||(5292780-5292884)
chr5 (14-183)||(31446410-31446579)
chr5 (149-326)||(1113610-1113787)
chr5 (102-183)||(9344517-9344598)
chr5 (102-183)||(23370498-23370579)
chr5 (102-183)||(36584733-36584814)
chr5 (102-183)||(14038604-14038685)
chr5 (102-183)||(14560265-14560346)
chr5 (102-183)||(22684010-22684091)
chr5 (102-183)||(23304841-23304922)
chr5 (102-183)||(23705348-23705429)
chr5 (102-183)||(24575635-24575716)
chr5 (102-183)||(24590279-24590360)
chr5 (102-183)||(24819093-24819174)
chr5 (102-183)||(27468724-27468805)
chr5 (102-183)||(39493103-39493184)
chr5 (102-183)||(42051348-42051429)
chr5 (14-61)||(9344630-9344677)
chr5 (14-48)||(1113505-1113539)
chr5 (14-52)||(5292701-5292739)
chr5 (14-58)||(6984436-6984480)
chr5 (14-58)||(14038720-14038764)
chr5 (14-58)||(14560186-14560230)
chr5 (14-62)||(15767432-15767480)
chr5 (14-62)||(17615741-17615789)
chr5 (14-62)||(17727598-17727646)
chr5 (14-58)||(22684126-22684170)
chr5 (14-58)||(23370614-23370658)
chr5 (14-58)||(23705464-23705508)
chr5 (14-58)||(24575751-24575795)
chr5 (14-58)||(24590200-24590244)
chr5 (14-58)||(27468840-27468884)
chr5 (14-58)||(30229574-30229618)
chr5 (14-62)||(31357215-31357263)
chr5 (14-62)||(35224151-35224199)
chr5 (14-58)||(36584654-36584698)
chr5 (14-62)||(36696374-36696422)
chr5 (14-58)||(39493024-39493068)
chr5 (14-58)||(42051464-42051508)
[»] chr2 (27 HSPs)
chr2 (11-327)||(24423087-24423394)
chr2 (14-326)||(21129248-21129551)
chr2 (14-231)||(28729612-28729820)
chr2 (14-326)||(21170056-21170368)
chr2 (47-324)||(20415238-20415503)
chr2 (14-183)||(24336198-24336358)
chr2 (14-206)||(29246440-29246623)
chr2 (14-206)||(43084903-43085086)
chr2 (14-183)||(22958158-22958318)
chr2 (47-199)||(26869449-26869595)
chr2 (14-177)||(4212106-4212260)
chr2 (102-183)||(9906015-9906096)
chr2 (102-183)||(27223702-27223783)
chr2 (102-183)||(35255279-35255360)
chr2 (102-183)||(35265888-35265969)
chr2 (102-183)||(40224585-40224666)
chr2 (113-183)||(43347680-43347750)
chr2 (102-183)||(10269258-10269339)
chr2 (102-183)||(11403474-11403555)
chr2 (47-93)||(28377607-28377653)
chr2 (102-175)||(39178563-39178636)
chr2 (14-62)||(27223623-27223671)
chr2 (14-62)||(9771316-9771364)
chr2 (14-58)||(10269179-10269223)
chr2 (14-58)||(11403590-11403634)
chr2 (14-58)||(39178671-39178715)
chr2 (14-58)||(43347590-43347634)
[»] chr3 (48 HSPs)
chr3 (13-326)||(9388808-9389127)
chr3 (38-321)||(11214262-11214545)
chr3 (14-326)||(15191706-15192009)
chr3 (14-231)||(17907771-17907978)
chr3 (14-231)||(7802258-7802466)
chr3 (14-326)||(29469438-29469741)
chr3 (14-183)||(19780670-19780830)
chr3 (14-183)||(20681620-20681780)
chr3 (47-327)||(14255498-14255775)
chr3 (14-183)||(6218481-6218641)
chr3 (14-183)||(13123953-13124113)
chr3 (14-183)||(14467879-14468039)
chr3 (14-177)||(37868711-37868865)
chr3 (14-177)||(37877229-37877383)
chr3 (102-183)||(8777004-8777085)
chr3 (102-183)||(18486337-18486418)
chr3 (102-183)||(28322677-28322758)
chr3 (102-183)||(38197086-38197167)
chr3 (102-183)||(39374401-39374482)
chr3 (102-183)||(11280839-11280920)
chr3 (11-327)||(4406623-4406930)
chr3 (102-183)||(5512982-5513063)
chr3 (102-183)||(5545460-5545541)
chr3 (102-183)||(16427597-16427678)
chr3 (14-183)||(16389318-16389487)
chr3 (102-183)||(5874140-5874221)
chr3 (102-183)||(12294629-12294710)
chr3 (102-183)||(24391949-24392030)
chr3 (102-183)||(41685980-41686061)
chr3 (104-183)||(24662188-24662267)
chr3 (113-183)||(5625822-5625892)
chr3 (149-198)||(1792233-1792282)
chr3 (102-183)||(4746035-4746116)
chr3 (14-62)||(28322789-28322837)
chr3 (14-62)||(38197007-38197055)
chr3 (14-61)||(5512903-5512950)
chr3 (14-61)||(5545573-5545620)
chr3 (213-315)||(9004053-9004155)
chr3 (14-58)||(4745956-4746000)
chr3 (14-58)||(5625938-5625982)
chr3 (14-58)||(5874256-5874300)
chr3 (14-62)||(11280951-11280999)
chr3 (14-58)||(12294745-12294789)
chr3 (213-297)||(14583744-14583828)
chr3 (14-58)||(16427713-16427757)
chr3 (14-58)||(24392065-24392109)
chr3 (14-58)||(24662107-24662151)
chr3 (14-58)||(41685901-41685945)
[»] scaffold0133 (3 HSPs)
scaffold0133 (14-326)||(40580-40883)
scaffold0133 (102-183)||(33426-33507)
scaffold0133 (14-58)||(33347-33391)
[»] chr8 (25 HSPs)
chr8 (14-326)||(19420648-19420951)
chr8 (14-312)||(30322969-30323259)
chr8 (134-327)||(23467572-23467765)
chr8 (14-252)||(19227231-19227460)
chr8 (14-183)||(26113539-26113699)
chr8 (14-183)||(32086161-32086321)
chr8 (14-206)||(19130976-19131159)
chr8 (14-183)||(6153314-6153474)
chr8 (102-183)||(36295234-36295315)
chr8 (102-183)||(13686453-13686534)
chr8 (102-183)||(36080254-36080335)
chr8 (102-183)||(244120-244201)
chr8 (102-183)||(797490-797571)
chr8 (102-183)||(3357109-3357190)
chr8 (102-183)||(9343409-9343490)
chr8 (102-183)||(44483431-44483512)
chr8 (275-326)||(25682244-25682295)
chr8 (102-183)||(29079021-29079102)
chr8 (14-58)||(244041-244085)
chr8 (14-58)||(797411-797455)
chr8 (14-58)||(3357225-3357269)
chr8 (14-58)||(9343330-9343374)
chr8 (14-62)||(13686565-13686613)
chr8 (14-58)||(29078942-29078986)
chr8 (14-58)||(44483352-44483396)
[»] chr7 (31 HSPs)
chr7 (13-231)||(9161995-9162204)
chr7 (14-252)||(15886080-15886309)
chr7 (14-312)||(10560442-10560731)
chr7 (47-233)||(21000849-21001035)
chr7 (14-183)||(6875743-6875903)
chr7 (14-206)||(5687758-5687941)
chr7 (14-183)||(169124-169284)
chr7 (102-183)||(2714143-2714224)
chr7 (14-183)||(4214244-4214404)
chr7 (47-327)||(25209384-25209649)
chr7 (102-183)||(1989864-1989945)
chr7 (102-183)||(8010593-8010674)
chr7 (102-183)||(11007483-11007564)
chr7 (14-183)||(17958626-17958786)
chr7 (14-206)||(9435489-9435672)
chr7 (68-183)||(8619637-8619752)
chr7 (102-183)||(9087526-9087607)
chr7 (102-183)||(42868157-42868238)
chr7 (102-183)||(26694271-26694352)
chr7 (102-183)||(24737022-24737103)
chr7 (102-183)||(26398626-26398707)
chr7 (102-183)||(40050634-40050715)
chr7 (14-62)||(11007404-11007452)
chr7 (131-183)||(22091480-22091532)
chr7 (14-61)||(40050747-40050794)
chr7 (14-58)||(2714259-2714303)
chr7 (14-58)||(9087447-9087491)
chr7 (14-62)||(22091387-22091435)
chr7 (14-58)||(24736943-24736987)
chr7 (14-58)||(26398742-26398786)
chr7 (14-58)||(26694387-26694431)
[»] chr6 (29 HSPs)
chr6 (14-329)||(12360357-12360672)
chr6 (13-326)||(25796099-25796418)
chr6 (14-231)||(20038198-20038406)
chr6 (14-326)||(9120765-9121068)
chr6 (14-183)||(34815595-34815755)
chr6 (102-183)||(26867068-26867149)
chr6 (102-183)||(12725293-12725374)
chr6 (102-183)||(27344012-27344093)
chr6 (102-183)||(27404752-27404833)
chr6 (102-183)||(4633195-4633276)
chr6 (102-183)||(16932667-16932748)
chr6 (102-183)||(32309501-32309582)
chr6 (14-206)||(12857125-12857308)
chr6 (149-324)||(18923647-18923822)
chr6 (14-144)||(27374991-27375121)
chr6 (14-144)||(27465348-27465478)
chr6 (102-183)||(3663677-3663758)
chr6 (102-183)||(25789986-25790067)
chr6 (102-183)||(26027677-26027758)
chr6 (214-326)||(25733091-25733203)
chr6 (131-183)||(32970378-32970430)
chr6 (14-62)||(32970475-32970523)
chr6 (14-61)||(3663598-3663645)
chr6 (213-326)||(13915637-13915750)
chr6 (14-62)||(12725405-12725453)
chr6 (14-58)||(16932588-16932632)
chr6 (14-58)||(25789907-25789951)
chr6 (14-58)||(26027598-26027642)
chr6 (14-62)||(32309613-32309661)
[»] scaffold0474 (1 HSPs)
scaffold0474 (14-326)||(3119-3422)
[»] chr1 (26 HSPs)
chr1 (47-230)||(26562761-26562944)
chr1 (43-231)||(23157658-23157846)
chr1 (14-326)||(151936-152239)
chr1 (37-231)||(7681550-7681729)
chr1 (14-183)||(5648179-5648339)
chr1 (14-183)||(4169493-4169653)
chr1 (14-206)||(19181103-19181286)
chr1 (14-183)||(21865854-21866014)
chr1 (102-183)||(35398998-35399079)
chr1 (102-183)||(38097344-38097425)
chr1 (102-183)||(3173863-3173944)
chr1 (102-183)||(5835488-5835569)
chr1 (102-183)||(35646523-35646604)
chr1 (102-183)||(47616392-47616473)
chr1 (102-183)||(7509531-7509612)
chr1 (102-183)||(36244916-36244997)
chr1 (102-183)||(51654360-51654441)
chr1 (149-191)||(21163508-21163550)
chr1 (131-183)||(12621623-12621675)
chr1 (14-61)||(51654473-51654520)
chr1 (14-58)||(7509452-7509496)
chr1 (14-62)||(12621720-12621768)
chr1 (14-62)||(35399110-35399158)
chr1 (14-62)||(35646635-35646683)
chr1 (14-58)||(36245032-36245076)
chr1 (14-62)||(47616504-47616552)
[»] scaffold0398 (4 HSPs)
scaffold0398 (14-252)||(2043-2281)
scaffold0398 (14-252)||(10298-10536)
scaffold0398 (288-327)||(1980-2019)
scaffold0398 (288-327)||(10235-10274)
[»] scaffold1638 (1 HSPs)
scaffold1638 (59-207)||(273-421)
[»] scaffold0194 (1 HSPs)
scaffold0194 (14-252)||(1969-2198)
[»] scaffold1002 (1 HSPs)
scaffold1002 (35-327)||(1910-2202)
[»] scaffold1465 (1 HSPs)
scaffold1465 (178-327)||(1-150)
[»] scaffold2119 (1 HSPs)
scaffold2119 (14-206)||(103-295)
[»] scaffold0251 (1 HSPs)
scaffold0251 (14-312)||(24804-25093)
[»] scaffold0099 (1 HSPs)
scaffold0099 (14-177)||(14593-14752)
[»] scaffold0022 (1 HSPs)
scaffold0022 (14-206)||(51379-51562)
[»] chr4 (22 HSPs)
chr4 (14-183)||(17920360-17920520)
chr4 (14-183)||(24025902-24026062)
chr4 (14-206)||(40468388-40468571)
chr4 (14-183)||(27190150-27190310)
chr4 (43-183)||(19952813-19952953)
chr4 (47-327)||(15204944-15205218)
chr4 (14-183)||(16258134-16258294)
chr4 (102-183)||(24642652-24642733)
chr4 (102-183)||(49509864-49509945)
chr4 (102-183)||(55753683-55753764)
chr4 (102-183)||(27658943-27659024)
chr4 (149-199)||(3375336-3375386)
chr4 (149-327)||(16307658-16307836)
chr4 (149-324)||(19573466-19573641)
chr4 (102-183)||(10749041-10749122)
chr4 (102-183)||(10962810-10962891)
chr4 (102-183)||(36020621-36020702)
chr4 (14-62)||(27658864-27658912)
chr4 (47-93)||(16307559-16307605)
chr4 (14-58)||(10749157-10749201)
chr4 (14-58)||(10962926-10962970)
chr4 (14-58)||(36020542-36020586)
[»] scaffold0016 (1 HSPs)
scaffold0016 (38-324)||(194344-194633)
[»] scaffold0199 (1 HSPs)
scaffold0199 (14-183)||(20613-20773)
[»] scaffold0272 (2 HSPs)
scaffold0272 (47-327)||(21616-21878)
scaffold0272 (47-327)||(16529-16791)
[»] scaffold0105 (1 HSPs)
scaffold0105 (102-183)||(45434-45515)
[»] scaffold0454 (1 HSPs)
scaffold0454 (102-184)||(3605-3687)
[»] scaffold0085 (2 HSPs)
scaffold0085 (149-252)||(56247-56350)
scaffold0085 (47-137)||(56166-56256)
[»] scaffold1362 (1 HSPs)
scaffold1362 (149-327)||(1762-1940)
[»] scaffold0201 (1 HSPs)
scaffold0201 (213-326)||(913-1026)
[»] scaffold0747 (1 HSPs)
scaffold0747 (14-144)||(4582-4712)
[»] scaffold0485 (1 HSPs)
scaffold0485 (14-48)||(36-70)
[»] scaffold1216 (1 HSPs)
scaffold1216 (102-183)||(1453-1534)


Alignment Details
Target: chr5 (Bit Score: 237; Significance: 1e-131; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 11 - 327
Target Start/End: Complemental strand, 21519153 - 21518837
Alignment:
Q  11 acatcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaag 110  Q
    |||| |||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  21519153 acattatctgattcagtggaggatgatgaggttgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagttcctgaag 21519054  T
Q  111 aatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaactt 210  Q
    ||||  ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  21519053 aatgtacttctggatgagctgcttctgaagctttagaagctggttctgatgaagtagctcctaaagcatgctttcctttcaaagcttgtgaaagcaactt 21518954  T
Q  211 gactccttccttgacagtttcctcttctaactcagaagccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgt 310  Q
    ||||||||||||||||||||||||| ||| ||||||||||   |||||||| | || ||||||||||||||| |||||||||||||||||||||||||||    
T  21518953 gactccttccttgacagtttcctctactatctcagaagccggagtagcaattacagctgctttctcaggatcaagctcatatcctgcagccttgagttgt 21518854  T
Q  311 tcatccctttgcttctc 327  Q
    |||||||||||||||||    
T  21518853 tcatccctttgcttctc 21518837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 13 - 326
Target Start/End: Complemental strand, 19475988 - 19475684
Alignment:
Q  13 atcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaa 112  Q
    ||||||||||| ||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19475988 atcatctgattcagtggatgatgatgagggtgaaga---------tggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaa 19475898  T
Q  113 tgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttga 212  Q
    |||||||||| |||| ||||||||| |||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    |    
T  19475897 tgagcttctgaatgaactgcttctgaagctttggaagctggttctgaagaagtagctcctgaagcatgctttcctttcaaagcttgtgataacaatgcta 19475798  T
Q  213 ctccttccttgacagtttcctcttctaactcagaagccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttc 312  Q
    ||||||||||||||||||| |||||||| |||| ||| || |||||||| | |  ||||||||||||||| |||||||| ||||||||||||||||||||    
T  19475797 ctccttccttgacagtttcttcttctaattcagcagctaaagtagcaattacaactgctttctcaggatcaagctcataacctgcagccttgagttgttc 19475698  T
Q  313 atccctttgcttct 326  Q
    ||||||||||||||    
T  19475697 atccctttgcttct 19475684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 16 - 326
Target Start/End: Complemental strand, 23404439 - 23404129
Alignment:
Q  16 atctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaatga 115  Q
    |||||||| ||| || |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  23404439 atctgattcagttgaggatgatgagggtgaagagggtggaaatggaaggtcaggaatctgaatattgatcttagcttttgaggaagtacctgatgaatga 23404340  T
Q  116 gcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgactc 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    ||||    
T  23404339 gcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgataacaatgctactc 23404240  T
Q  216 cttccttgacagtttcctcttctaactcagaagccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttcatc 315  Q
    ||||||||||||| || | ||||||||||| ||| || ||||| ||   |   || || |||||| | |||||||| |||||||||||||||||||| ||    
T  23404239 cttccttgacagtctcttgttctaactcagcagctaaagtagccatctcaacagccttttcaggagcaagctcataccctgcagccttgagttgttcctc 23404140  T
Q  316 cctttgcttct 326  Q
    |||||| ||||    
T  23404139 cctttgattct 23404129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 14 - 326
Target Start/End: Complemental strand, 20560383 - 20560080
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||||||||||||||||||||||||||||         ||||||||||||||||||| ||||||  ||||||||| | |||||||||||||| |    
T  20560383 tcatctgatttagtggatgatgatgagggtgaaga---------tggaaggtcaggaatctgagtattgacattagcttttaaagaagtacctgaagagt 20560293  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgac 213  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||| |||| ||  || ||    
T  20560292 gagcttctggataagctgcttctggatctttagatgctggttctgatgaagtagctcctgaagcctgcttgtctttcaaagcttgagataacagttttac 20560193  T
Q  214 tccttccttgacagtttcctcttctaactcagaagccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttca 313  Q
    ||| |||| ||||||||| | ||| | ||||| |||||| | |||||    ||  || ||||||||| | |||| ||| |||||| |||||||||||||     
T  20560192 tccctcctggacagtttctttttcaacctcagcagccaaagcagcaaactcagcagccttctcaggagcaagcttataccctgcaaccttgagttgttcc 20560093  T
Q  314 tccctttgcttct 326  Q
    || |||| |||||    
T  20560092 tctcttttcttct 20560080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 14 - 231
Target Start/End: Original strand, 24928332 - 24928540
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| ||||||||||||||||||||||||         ||||||||||||||||||| ||||||| ||||||| | | |||||||||||||| |    
T  24928332 tcatctgattcagtggatgatgatgagggtgaaga---------tggaaggtcaggaatctgagtattgatattagcttgtaaagaagtacctgaagagt 24928422  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgac 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||| |||||||  || ||    
T  24928423 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcctgcttgtctttcaaagcttgagatagcagttttac 24928522  T
Q  214 tccttccttgacagtttc 231  Q
    ||| | || |||||||||    
T  24928523 tcccttctggacagtttc 24928540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 22155222 - 22155062
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||||||         ||||| ||| ||| | || ||| || ||| |||||||||| |    
T  22155222 tcatctgattctgtggatgatgaagagggtgaagagggtagagatggaa---------tctgagtatagatgtcaggtttggatgaattacctgaagatt 22155132  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||||||| |||||||||||||||| ||  |||||||||||||||| ||||||||||| |||||    
T  22155131 gagcttctggatgaactgcttctggagcttttgaaactggttctgatgaagttgctcctgaagcttgctt 22155062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 40399074 - 40398914
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| ||| |||||||||||||||||||||||| ||||         |||||||||| ||| ||| | || ||| || ||| |||||||||| |    
T  40399074 tcatctgattcagttgatgatgatgagggtgaagagggtagaga---------aggaatctgagtatagatgtcaggtttggatgaattacctgaagatt 40398984  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||||||| ||||||||||||| || ||  || ||||||||||||||||||||||||| |||||    
T  40398983 gagcttctggatgaactgcttctggagcatttgaaacttgttctgatgaagtagctcctgaagcttgctt 40398914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 183
Target Start/End: Original strand, 27605571 - 27605731
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| ||| |||||||||||||||||||||||| ||||         |||||||||| ||| ||| | || ||| || ||| |||||||||| |    
T  27605571 tcatctgattcagttgatgatgatgagggtgaagagggtagaga---------aggaatctgagtatagatatcagttttggatgaattacctgaagatt 27605661  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||||||| |||||||||||||||| ||  | |||||||| ||||| ||||||||||| |||||    
T  27605662 gagcttctggatgaactgcttctggagcttttgaaacaggttctgaagaagtggctcctgaagcttgctt 27605731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 31842120 - 31841960
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||||||         ||||| ||| ||| | || ||| || ||| |||||||||| |    
T  31842120 tcatctgattctgtggatgatgaagagggtgaagagggtagagatggaa---------tctgagtatagatgtcaggtttggatgaattacctgaagatt 31842030  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||||||| |||||||||||||||| ||  | |||||||||||||| ||||||||||| |||||    
T  31842029 gagcttctggatgaactgcttctggagcttttgaaacaggttctgatgaagttgctcctgaagcttgctt 31841960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 37732180 - 37732261
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  |||||||||||||||||||| ||||||||||| |||||    
T  37732180 tacctgaagactgagcttctggatgaactgcttctggagcttctgatgctggttctgatgaagttgctcctgaagcttgctt 37732261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 207
Target Start/End: Complemental strand, 20788701 - 20788520
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    ||||||||||  |||||||||||||||||||||||||||||| ||        ||| |||||| ||| ||| | |||||| || ||| ||||| |||| |    
T  20788701 tcatctgattcggtggatgatgatgagggtgaagagggtgga-at--------aggtatctgagtatagatatcagctttggatgaaatacctaaagagt 20788611  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaa 207  Q
    |||||||||||||||||||||||||||| |||||||| |||||   ||| ||||||| ||| ||||||||    ||||| ||||||||||||||    
T  20788610 gagcttctggatgagctgcttctggagccttagatgcaggttc---tgaggtagctcttgatgcatgcttgttcttcaaggcttgtgatagcaa 20788520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 14449251 - 14449332
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || ||||||||||||||||| ||||||||||| |||||    
T  14449251 tacctgaagactgagcttctggatgaactgcttctggagcttctgaagctggttctgatgaagttgctcctgaagcttgctt 14449332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 15767401 - 15767320
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || ||||||||||||||||| ||||||||||| |||||    
T  15767401 tacctgaagactgagcttctggatgaactgcttctggagcttctgaagctggttctgatgaagttgctcctgaagcttgctt 15767320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 17727567 - 17727486
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||| ||  |||||||||||||||| ||||||||||| |||||    
T  17727567 tacctgaagactgagcttctggatgaactgcttctggagcttttgaaactggttctgatgaagttgctcctgaagcttgctt 17727486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 27044452 - 27044533
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || ||||||||||||||||| ||||||||||| |||||    
T  27044452 tacctgaagactgagcttctggatgaactgcttctggagcttctgaagctggttctgatgaagttgctcctgaagcttgctt 27044533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 327
Target Start/End: Complemental strand, 34060463 - 34060285
Alignment:
Q  149 gctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgactccttccttgacagtttcctcttctaactcagaag 248  Q
    ||||||||||| ||||||| ||||||||||| ||||||||||||||||||   || |||     ||||||||||||||||||| ||| ||| ||||| ||    
T  34060463 gctggttctgaagaagtagttcctgaagcattctttcctttcaaagcttgacttaacaaggctgctccttccttgacagtttcttctgctatctcagcag 34060364  T
Q  249 ccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttcatccctttgcttctc 327  Q
    |||| | ||||||    |  |||||||||||| | | |||||| ||||| |||||||| |||||||| | |||||||||    
T  34060363 ccaatgaagcaatttctgcagctttctcaggagcaaactcataccctgctgccttgagctgttcatctcgttgcttctc 34060285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 35224120 - 35224039
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || | ||||||||||||||| ||||||||||| |||||    
T  35224120 tacctgaagactgagcttctggatgaactgcttctggagcttctgaagttggttctgatgaagttgctcctgaagcttgctt 35224039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 36696343 - 36696262
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| ||||||||||||| |  || ||||||||||||||||| ||||||||||| |||||    
T  36696343 tacctgaagactgagcttctggatgaactgcttctggagcctctgaagctggttctgatgaagttgctcctgaagcttgctt 36696262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 327
Target Start/End: Original strand, 17448935 - 17449242
Alignment:
Q  11 acatcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttt----tgaggaag--tac 104  Q
    ||||||||||| | |||||| ||||||||||      ||||||  |||||||||||| |||||||| ||||||| ||||||||    |||| | |  |||    
T  17448935 acatcatctgagtcagtggaagatgatgagg------agggtgaggatggaaggtcaagaatctgagtattgattttagctttaggttgagaaggaatac 17449028  T
Q  105 ctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatag 204  Q
    ||||||||||||||||||| ||||| ||||||| ||||         |||||||| ||||||||| ||||||  ||||||||||||   |||||   ||     
T  17449029 ctgaagaatgagcttctggttgagcagcttctgaagct---------ggttctgaagaagtagcttctgaagtgtgctttcctttccgggcttgccttaa 17449119  T
Q  205 caacttgactccttccttgacagtttcctcttctaactcagaagccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttg 304  Q
    ||  ||  |||||||| | |||||||||||||| |  |||| |||||||| ||||||    |   ||||||||||| | |||||||| ||||| ||||||    
T  17449120 catatttgctccttccctaacagtttcctcttcaagttcagcagccaaggaagcaatttctgcaactttctcaggagcaagctcataccctgctgccttg 17449219  T
Q  305 agttgttcatccctttgcttctc 327  Q
    || |||||||| |||||||||||    
T  17449220 agctgttcatctctttgcttctc 17449242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 177
Target Start/End: Complemental strand, 17615710 - 17615635
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagc 177  Q
    |||||||||| ||||||||||||||| |||||||||||||||| ||  |||| ||||||||||| |||||||||||    
T  17615710 tacctgaagactgagcttctggatgaactgcttctggagcttttgaaactggatctgatgaagttgctcctgaagc 17615635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 177
Target Start/End: Complemental strand, 31357184 - 31357109
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagc 177  Q
    |||||||||| ||||||||||||||| |||||||||||||||| ||  |||| ||||||||||| |||||||||||    
T  31357184 tacctgaagactgagcttctggatgaactgcttctggagcttttgaaactggatctgatgaagttgctcctgaagc 31357109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 206
Target Start/End: Original strand, 5292780 - 5292884
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtga 201  Q
    |||||||||| |||||||||||||||||||||||| ||||||| ||  | |||||||| ||||| || |||||||| |||||    ||||| ||||||||    
T  5292780 tacctgaagagtgagcttctggatgagctgcttcttgagcttttgaaacaggttctgaagaagtggcccctgaagcttgcttattcttcaaggcttgtga 5292879  T
Q  202 tagca 206  Q
    |||||    
T  5292880 tagca 5292884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 31446579 - 31446410
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattatt-gatcttagcttttgaggaagtacctgaagaa 112  Q
    ||||||||||  || |||||||||||| ||||||| |||||||  ||||||  |||||||||| |||| |||   |||||| || ||| |||||||||||    
T  31446579 tcatctgattctgttgatgatgatgagagtgaagaaggtggagtaggaagggtaggaatctgagtattagatgg-agctttagatgaattacctgaagaa 31446481  T
Q  113 tgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||| ||||| ||||| ||||||| ||||||| |  |  || |||||||| || ||||||||||| |||||    
T  31446480 tgaggttctgaatgaggtgcttcttgagcttttgtagaaggatctgatgatgtggctcctgaagcttgctt 31446410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 149 - 326
Target Start/End: Original strand, 1113610 - 1113787
Alignment:
Q  149 gctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgactccttccttgacagtttcctcttctaactcagaag 248  Q
    ||||||||||| ||||||||| ||||||| |||||  ||||||||||||| || |||| ||| ||||| ||||  ||| |||||| ||| | ||||| ||    
T  1113610 gctggttctgaagaagtagcttctgaagcttgcttgtctttcaaagcttgagaaagcagcttcactccctcctgaacattttccttttcaacctcagcag 1113709  T
Q  249 ccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttcatccctttgcttct 326  Q
    |||| | |||||    ||  || ||||||||| | |||| ||| ||||||||||| |||||||| || |||| |||||    
T  1113710 ccaacgcagcaaactcagcagccttctcaggagctagcttataccctgcagccttaagttgttcctctcttttcttct 1113787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 9344598 - 9344517
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||||| ||  |||||||||||||||| | ||||||||| |||||    
T  9344598 tacctgaggactgagcttctggatgaattgcttctggagcttttgaaactggttctgatgaagttgttcctgaagcttgctt 9344517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 23370579 - 23370498
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||||| ||  |||||||||||||||| | ||||||||| |||||    
T  23370579 tacctgaggactgagcttctggatgaattgcttctggagcttttgaaactggttctgatgaagttgttcctgaagcttgctt 23370498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 36584733 - 36584814
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||||| ||  |||||||||||||||| | ||||||||| |||||    
T  36584733 tacctgaggactgagcttctggatgaattgcttctggagcttttgaaactggttctgatgaagttgttcctgaagcttgctt 36584814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 14038685 - 14038604
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||| | ||  |||| ||||||||||| ||||||||||| |||||    
T  14038685 tacctgaggactgagcttctggatgaattgcttctggagctgttgaaactggatctgatgaagttgctcctgaagcttgctt 14038604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 14560265 - 14560346
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||| | ||  |||| ||||||||||| ||||||||||| |||||    
T  14560265 tacctgaggactgagcttctggatgaattgcttctggagctgttgaaactggatctgatgaagttgctcctgaagcttgctt 14560346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 22684091 - 22684010
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||| | ||  |||| ||||||||||| ||||||||||| |||||    
T  22684091 tacctgaggactgagcttctggatgaattgcttctggagctgttgaaactggatctgatgaagttgctcctgaagcttgctt 22684010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 23304922 - 23304841
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||| | ||  |||| ||||||||||| ||||||||||| |||||    
T  23304922 tacctgaggactgagcttctggatgaattgcttctggagctgttgaaactggatctgatgaagttgctcctgaagcttgctt 23304841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 23705429 - 23705348
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  |||||||||||| || ||  |||||||||||||||| | ||||||||| |||||    
T  23705429 tacctgaggactgagcttctggatgaattgcttctggagcctttgaaactggttctgatgaagttgttcctgaagcttgctt 23705348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 24575716 - 24575635
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||| | ||  |||| ||||||||||| ||||||||||| |||||    
T  24575716 tacctgaggactgagcttctggatgaattgcttctggagctgttgaaactggatctgatgaagttgctcctgaagcttgctt 24575635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 24590279 - 24590360
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||| | ||  |||| ||||||||||| ||||||||||| |||||    
T  24590279 tacctgaggactgagcttctggatgaattgcttctggagctgttgaaactggatctgatgaagttgctcctgaagcttgctt 24590360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 24819093 - 24819174
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||| | ||  |||| ||||||||||| ||||||||||| |||||    
T  24819093 tacctgaggactgagcttctggatgaattgcttctggagctgttgaaactggatctgatgaagttgctcctgaagcttgctt 24819174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 27468805 - 27468724
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||| | ||  |||| ||||||||||| ||||||||||| |||||    
T  27468805 tacctgaggactgagcttctggatgaattgcttctggagctgttgaaactggatctgatgaagttgctcctgaagcttgctt 27468724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 39493103 - 39493184
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||| | ||  |||| ||||||||||| ||||||||||| |||||    
T  39493103 tacctgaggactgagcttctggatgaattgcttctggagctgttgaaactggatctgatgaagttgctcctgaagcttgctt 39493184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 42051429 - 42051348
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  |||||||||||| || ||  |||||||||||||||| | ||||||||| |||||    
T  42051429 tacctgaggactgagcttctggatgaattgcttctggagcctttgaaactggttctgatgaagttgttcctgaagcttgctt 42051348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 9344677 - 9344630
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatgga 61  Q
    ||||||||||  ||||||||||| ||||||||||||||| ||||||||    
T  9344677 tcatctgattctgtggatgatgaagagggtgaagagggtagagatgga 9344630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 1113505 - 1113539
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaaga 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  1113505 tcatctgattcagtggatgatgatgagggtgaaga 1113539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 5292701 - 5292739
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggt 52  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  5292701 tcatctgattcagttgatgatgatgagggtgaagagggt 5292739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 6984480 - 6984436
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  6984480 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 6984436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 14038764 - 14038720
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  14038764 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 14038720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 14560186 - 14560230
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  14560186 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 14560230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 15767480 - 15767432
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaa 62  Q
    ||||||||||  || |||||||| ||||||||||||||| |||||||||    
T  15767480 tcatctgattctgttgatgatgaagagggtgaagagggtagagatggaa 15767432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 17615789 - 17615741
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaa 62  Q
    ||||||||||  || |||||||| ||||||||||||||| |||||||||    
T  17615789 tcatctgattctgttgatgatgaagagggtgaagagggtagagatggaa 17615741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 17727646 - 17727598
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaa 62  Q
    ||||||||||  || |||||||| ||||||||||||||| |||||||||    
T  17727646 tcatctgattctgttgatgatgaagagggtgaagagggtagagatggaa 17727598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 22684170 - 22684126
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  22684170 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 22684126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 23370658 - 23370614
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  23370658 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 23370614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 23705508 - 23705464
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  23705508 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 23705464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 24575795 - 24575751
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  24575795 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 24575751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 24590200 - 24590244
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  24590200 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 24590244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 27468884 - 27468840
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  27468884 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 27468840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 30229574 - 30229618
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  30229574 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 30229618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 31357263 - 31357215
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaa 62  Q
    ||||||||||  || |||||||| ||||||||||||||| |||||||||    
T  31357263 tcatctgattctgttgatgatgaagagggtgaagagggtagagatggaa 31357215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 35224199 - 35224151
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaa 62  Q
    ||||||||||  || |||||||| ||||||||||||||| |||||||||    
T  35224199 tcatctgattctgttgatgatgaagagggtgaagagggtagagatggaa 35224151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 36584654 - 36584698
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  36584654 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 36584698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 36696422 - 36696374
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaa 62  Q
    ||||||||||  || |||||||| ||||||||||||||| |||||||||    
T  36696422 tcatctgattctgttgatgatgaagagggtgaagagggtagagatggaa 36696374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 39493024 - 39493068
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  39493024 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 39493068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 42051508 - 42051464
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  42051508 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 42051464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 225; Significance: 1e-124; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 11 - 327
Target Start/End: Complemental strand, 24423394 - 24423087
Alignment:
Q  11 acatcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaag 110  Q
    |||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24423394 acattatctgattcagtggaggatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagttcctgaag 24423295  T
Q  111 aatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaactt 210  Q
    |||| ||||||||||||||||||||         ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24423294 aatgtgcttctggatgagctgcttc---------agaagctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagaaactt 24423204  T
Q  211 gactccttccttgacagtttcctcttctaactcagaagccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgt 310  Q
    ||||||||| ||||||||||||||||||| |||||||||||  |||||||| | || ||||||||||||||| |||||||||||||||||||||||||||    
T  24423203 gactccttctttgacagtttcctcttctatctcagaagccagagtagcaattacagctgctttctcaggatcaagctcatatcctgcagccttgagttgt 24423104  T
Q  311 tcatccctttgcttctc 327  Q
    |||||||||||||||||    
T  24423103 tcatccctttgcttctc 24423087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 14 - 326
Target Start/End: Complemental strand, 21129551 - 21129248
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| ||||||||||||||||||||||||         ||||||||||| ||| ||| ||||||  ||||||||| |||||||||||||||| |    
T  21129551 tcatctgattcagtggatgatgatgagggtgaaga---------tggaaggtcagtaatttgagtattgactttagcttttaaggaagtacctgaagagt 21129461  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgac 213  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| || ||    
T  21129460 gagcttctggatgatttgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgagataacaattttac 21129361  T
Q  214 tccttccttgacagtttcctcttctaactcagaagccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttca 313  Q
    |||||||| ||||||||| | ||| || |||| ||| || | |||||    ||  || |||| |||| | |||||||| ||||||||||||||||||||     
T  21129360 tccttcctggacagtttcttgttcaaattcagcagctaaagcagcaaactcagcagccttcttaggagcaagctcataccctgcagccttgagttgttcc 21129261  T
Q  314 tccctttgcttct 326  Q
    ||||||| |||||    
T  21129260 tcccttttcttct 21129248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 14 - 231
Target Start/End: Complemental strand, 28729820 - 28729612
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| ||||||||||||||||||||||||         ||||||||||||||||||| ||||||  ||||||||| |||||||||||||||| |    
T  28729820 tcatctgattcagtggatgatgatgagggtgaaga---------tggaaggtcaggaatctgagtattgactttagcttttaaggaagtacctgaagagt 28729730  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgac 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||| ||| || ||    
T  28729729 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgcttatctttcaaagcttgagataacaattttac 28729630  T
Q  214 tccttccttgacagtttc 231  Q
    |||||||| |||||||||    
T  28729629 tccttcctggacagtttc 28729612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 14 - 326
Target Start/End: Complemental strand, 21170368 - 21170056
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| ||| || |||||||||||||||||||||| |  ||||||||| ||||||||| ||||||  ||||||||| ||||||||||| ||||||    
T  21170368 tcatctgattcagttgaggatgatgagggtgaagagggtgaaattggaaggtctggaatctgagtattgactttagcttttaaggaagtacctcaagaat 21170269  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgac 213  Q
     | ||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||  |||||||||||||||||| |||     |    
T  21170268 taccttctggatgagctgcttctgaagctttagaagttggttctgatgaagtagctcctgaagcatgcttatctttcaaagcttgtgataacaatgctgc 21170169  T
Q  214 tccttccttgacagtttcctcttctaactcagaagccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttca 313  Q
    |||||||||||||||||| | ||| || |||| ||| || | ||| ||   ||  || || |||||| | |||||||| ||||||||||||||||||||     
T  21170168 tccttccttgacagtttcttgttccaattcagcagctaaagcagccatctcagcagccttttcaggagcaagctcataccctgcagccttgagttgttcc 21170069  T
Q  314 tccctttgcttct 326  Q
    ||||||| |||||    
T  21170068 tcccttttcttct 21170056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 324
Target Start/End: Complemental strand, 20415503 - 20415238
Alignment:
Q  47 gagggtggagatggaaggtcaggaatctgattattgatcttagcttttg-aggaagtacctgaagaatgagcttctggatgagctgcttctggagcttta 145  Q
    ||||||| |||||||| ||| |||||||||  |||||   ||||||||| ||||| ||||||||||||||||||||||||||||         ||||||     
T  20415503 gagggtgaagatggaaagtctggaatctgaacattgactctagcttttgtaggaa-tacctgaagaatgagcttctggatgagc---------agctttt 20415414  T
Q  146 gatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgactccttccttgacagtttcctcttctaactcag 245  Q
    |||||||||||||  ||||   ||||||||| ||||||||||||||  ||||||  || ||      ||||||||||||||||||||||||| || ||||    
T  20415413 gatgctggttctggagaag---ctcctgaagtatgctttcctttcagggcttgtcttaacagggctgctccttccttgacagtttcctcttccaattcag 20415317  T
Q  246 aagccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttcatccctttgctt 324  Q
     |||||  |  ||||||| || |||||||||| || | |||||||| ||||| ||||||||||||||||| ||||||||    
T  20415316 cagccagagaggcaataaaagctgctttctcaagagcaagctcataccctgctgccttgagttgttcatctctttgctt 20415238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 24336358 - 24336198
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    ||||||||||  || |||||||||||||||||||||||| ||||         |||||||||| ||| ||| | || ||| || ||| |||||||||| |    
T  24336358 tcatctgattctgttgatgatgatgagggtgaagagggtagaga---------aggaatctgagtatagatgtcaggtttggatgaattacctgaagatt 24336268  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||||||| ||||||||||||| || ||  |||||||||||||||||||||||||||| |||||    
T  24336267 gagcttctggatgaactgcttctggagcatttgaaactggttctgatgaagtagctcctgaagcttgctt 24336198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 14 - 206
Target Start/End: Original strand, 29246440 - 29246623
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||||||| |||||||||||||||||||||||| |||          |||||||||| ||| ||| | || ||| || ||| |||||||||| |    
T  29246440 tcatctgatttagttgatgatgatgagggtgaagagggtagagt---------aggaatctgagtatagatatcagttttggatgaaatacctgaagatt 29246530  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagca 206  Q
    |||||||||||||| |||||||||||||||| ||  | |||||||| ||||| ||||||||||| |||||    ||||| |||||||||||||    
T  29246531 gagcttctggatgaactgcttctggagcttttgaaacaggttctgaagaagtggctcctgaagcttgcttattcttcaaggcttgtgatagca 29246623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 14 - 206
Target Start/End: Original strand, 43084903 - 43085086
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| ||| |||||||||||||||||||||||| |||          |||||||||| ||| ||| | || ||| || ||| |||||||||| |    
T  43084903 tcatctgattcagttgatgatgatgagggtgaagagggtagagt---------aggaatctgagtatagatatcagttttggatgaaatacctgaagatt 43084993  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagca 206  Q
    |||||||||||||| |||||||||||||||| ||  | |||||||| ||||||||||||||||| |||||    ||||| |||||||||||||    
T  43084994 gagcttctggatgaactgcttctggagcttttgaaacaggttctgaagaagtagctcctgaagcttgcttattcttcaaggcttgtgatagca 43085086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 22958318 - 22958158
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    ||||||||||  ||||||||||| ||||||||||||||| || ||||||         ||||| ||| ||| | || ||| || ||| |||||||||| |    
T  22958318 tcatctgattctgtggatgatgaagagggtgaagagggtagatatggaa---------tctgagtatagatgtcaggtttggatgaattacctgaagatt 22958228  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||||||| |||||||||||||||| ||  |||||||||||||||| ||||||||||| |||||    
T  22958227 gagcttctggatgaactgcttctggagcttttgaaactggttctgatgaagttgctcctgaagcttgctt 22958158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 199
Target Start/End: Original strand, 26869449 - 26869595
Alignment:
Q  47 gagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaatgagcttctggatgagctgcttctggagctttag 146  Q
    ||||||| ||||| || |||||||||||||  |||||| ||||||||      |||||||||||| |||||||||||  |||| |||||||||||||| |    
T  26869449 gagggtgaagatgaaaagtcaggaatctgaacattgattttagcttt------agtacctgaagagtgagcttctggtcgagcagcttctggagcttttg 26869542  T
Q  147 atgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgt 199  Q
    ||||||||||||| |  || ||| ||||||||||||| ||||||| |||||||    
T  26869543 atgctggttctgaaggtgttgcttctgaagcatgcttacctttcagagcttgt 26869595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 4212106 - 4212260
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    ||||||||||  || |||||||| ||||||||||||||| |||||||||         ||||| ||| ||| | || ||| || ||| |||||||||| |    
T  4212106 tcatctgattctgttgatgatgaagagggtgaagagggtagagatggaa---------tctgagtatagatgtcaggtttggatgaattacctgaagatt 4212196  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagc 177  Q
    |||||||||||||| |||||||||||||||| ||  |||||||||||||||| |||||||||||    
T  4212197 gagcttctggatgaactgcttctggagcttttgaaactggttctgatgaagttgctcctgaagc 4212260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 9906096 - 9906015
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||| ||  |||||||||||||||| ||||||||||| |||||    
T  9906096 tacctgaagattgagcttctggatgaactgcttctggagcttttgaaactggttctgatgaagttgctcctgaagcttgctt 9906015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 27223702 - 27223783
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || ||||||||||||||||| ||||||||||| |||||    
T  27223702 tacctgaagactgagcttctggatgaactgcttctggagcttctgaagctggttctgatgaagttgctcctgaagcttgctt 27223783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 35255279 - 35255360
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || ||||||||||||||||| ||||||||||| |||||    
T  35255279 tacctgaagactgagcttctggatgaactgcttctggagcttctgaagctggttctgatgaagttgctcctgaagcttgctt 35255360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 35265888 - 35265969
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || ||||||||||||||||| ||||||||||| |||||    
T  35265888 tacctgaagactgagcttctggatgaactgcttctggagcttctgaagctggttctgatgaagttgctcctgaagcttgctt 35265969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 40224585 - 40224666
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||  | |||||||||||||| ||||||||||| |||||    
T  40224585 tacctgaagattgagcttctggatgagctgcttctggagcttttgaaacaggttctgatgaagttgctcctgaagcttgctt 40224666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 43347680 - 43347750
Alignment:
Q  113 tgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||||||||  ||||||||||||||| ||  |||||||||||||||| ||||||||||| |||||    
T  43347680 tgagcttctggatgaattgcttctggagcttttgaaactggttctgatgaagttgctcctgaagcttgctt 43347750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 10269258 - 10269339
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||| | ||  |||| ||||||||||| ||||||||||| |||||    
T  10269258 tacctgaggactgagcttctggatgaattgcttctggagctgttgaaactggatctgatgaagttgctcctgaagcttgctt 10269339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 11403555 - 11403474
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||| | ||  |||| ||||||||||| ||||||||||| |||||    
T  11403555 tacctgaggactgagcttctggatgaattgcttctggagctgttgaaactggatctgatgaagttgctcctgaagcttgctt 11403474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 28377653 - 28377607
Alignment:
Q  47 gagggtggagatggaaggtcaggaatctgattattgatcttagcttt 93  Q
    ||||||| |||||||||||||||||||||| ||||||| ||||||||    
T  28377653 gagggtgaagatggaaggtcaggaatctgaatattgattttagcttt 28377607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 39178636 - 39178563
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaa 175  Q
    ||||||| || |||||||||||||||  ||||||||||||| | ||  |||| ||||||||||| |||||||||    
T  39178636 tacctgaggactgagcttctggatgaattgcttctggagctgttgaaactggatctgatgaagttgctcctgaa 39178563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 27223623 - 27223671
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaa 62  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||||||    
T  27223623 tcatctgattctgtggatgatgaagagggtgaagagggtagagatggaa 27223671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 9771364 - 9771316
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaa 62  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||| ||||    
T  9771364 tcatctgattctgtggatgatgaagagggtgaagagggtagagaaggaa 9771316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 10269179 - 10269223
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  10269179 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 10269223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 11403634 - 11403590
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  11403634 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 11403590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 39178715 - 39178671
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  39178715 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 39178671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 43347590 - 43347634
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  43347590 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 43347634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 161; Significance: 8e-86; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 13 - 326
Target Start/End: Complemental strand, 9389127 - 9388808
Alignment:
Q  13 atcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagta------cct 106  Q
    ||||||||||| |||||||||||||||| |||||||||||| ||||| |||||||||||||||| ||||||  |||||||||||| |||||      |||    
T  9389127 atcatctgattcagtggatgatgatgagagtgaagagggtgaagatgaaaggtcaggaatctgagtattgactttagcttttgagaaagtatgaatacct 9389028  T
Q  107 gaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagca 206  Q
    ||||| ||| ||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  9389027 gaagattgaccttctagatgagctgcttctgaagctttagaagctggttctgatgaagtagctcctgaagcatgcttatctttcaaagcttgtgatagca 9388928  T
Q  207 acttgactccttccttgacagtttcctcttctaactcagaagccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgag 306  Q
    |    |||||||||||||||||||| | |||||| |||| ||| || | |||||| | || ||||||||||||  | |||||||| ||||||||||||||    
T  9388927 atgctactccttccttgacagtttcttgttctaattcagcagctaaagaagcaattacagctgctttctcaggggcaagctcataccctgcagccttgag 9388828  T
Q  307 ttgttcatccctttgcttct 326  Q
    |||||| |||||||||||||    
T  9388827 ttgttcctccctttgcttct 9388808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 38 - 321
Target Start/End: Complemental strand, 11214545 - 11214262
Alignment:
Q  38 gagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaatgagcttctggatgagctgcttctg 137  Q
    |||| ||| |||||||||||||||||||||||||||||| ||||||  |||||||| || |   ||||||||||||||||||||||||||||||||||||    
T  11214545 gaggatgatgagggtggagatggaaggtcaggaatctgagtattgactttagctttagaagggatacctgaagaatgagcttctggatgagctgcttctg 11214446  T
Q  138 gagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgactccttccttgacagtttcctcttc 237  Q
     |||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||| || |||||||||||||||| |||||||||    
T  11214445 aagcttttgatgctggttctgatgaagtagctcctgaagcatgctttcctttcagggcttgtgataacaattttactccttccttgacagcttcctcttc 11214346  T
Q  238 taactcagaagccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttcatccctttg 321  Q
     || |||| ||  || ||||| || | ||  || ||||||||| | |||||||| || || |||||||| |||||||| |||||    
T  11214345 caattcagcagttaaagtagctatcacagcagccttctcaggagcaagctcatacccagctgccttgagctgttcatctctttg 11214262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 14 - 326
Target Start/End: Complemental strand, 15192009 - 15191706
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| ||||||||||||||||||||||||         ||||||||||||||||||| ||||||  ||||||||| |||||||||||||||| |    
T  15192009 tcatctgattcagtggatgatgatgagggtgaaga---------tggaaggtcaggaatctgagtattgacattagcttttaaggaagtacctgaagagt 15191919  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgac 213  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||| ||  || ||    
T  15191918 gagcttctggatgagctgcttctgaagctttagatgctggttctgatgaagtagctcctgaagcatgcttgtctttcaaagcttgagataacagttttac 15191819  T
Q  214 tccttccttgacagtttcctcttctaactcagaagccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttca 313  Q
    ||| |||| ||||||||| | ||| |  |||| ||| || | |||||    ||  || ||||||||| | |||| ||| ||||||||||||||||||||     
T  15191818 tccatcctggacagtttctttttcaacttcagcagctaaagcagcaaactcagcagccttctcaggagcaagcttataccctgcagccttgagttgttcc 15191719  T
Q  314 tccctttgcttct 326  Q
    ||||||| |||||    
T  15191718 tcccttttcttct 15191706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 14 - 231
Target Start/End: Complemental strand, 17907978 - 17907771
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| ||||||||||||||||||||||||         |||||||||| |||||||| ||||||| ||||||| | | |||||||||||||| |    
T  17907978 tcatctgattcagtggatgatgatgagggtgaaga---------tggaaggtcaagaatctgagtattgatattagcttgtaaagaagtacctgaagagt 17907888  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgac 213  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||  ||||||||||||| |||||||  || ||    
T  17907887 gagcttctggatgagctgcttctagagctttagatgctggttctgatgaagtagctcct-aagcctgcttgtctttcaaagcttgagatagcagttttac 17907789  T
Q  214 tccttccttgacagtttc 231  Q
    ||| |||| |||||||||    
T  17907788 tccctcctggacagtttc 17907771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 14 - 231
Target Start/End: Complemental strand, 7802466 - 7802258
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| |||||||||||||||||||||||| ||         ||| |||||||||||| ||||||| | ||||| | | |||||||||||||  |    
T  7802466 tcatctgattcagtggatgatgatgagggtgaagaagg---------aagttcaggaatctgagtattgatatcagcttgtaaagaagtacctgaagtgt 7802376  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgac 213  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||  ||||||||||||| |||||||  || ||    
T  7802375 gagcttctggatgagctgcttctggagctttaggtgctggttctgatggagtagctcctgaagcctgcttgtctttcaaagcttgagatagcagttttac 7802276  T
Q  214 tccttccttgacagtttc 231  Q
    ||  |||| |||||||||    
T  7802275 tctctcctggacagtttc 7802258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 14 - 326
Target Start/End: Complemental strand, 29469741 - 29469438
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| |||||||||||||||||||||||| ||         ||| |||||||||||| || |||| | || ||||   || ||||||||||| |    
T  29469741 tcatctgattcagtggatgatgatgagggtgaagaagg---------aagatcaggaatctgagtactgatgtcagtttttagtgatgtacctgaagagt 29469651  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgac 213  Q
    ||||||||||| |||||||||||| ||||||||| ||||||||||| ||||||||| ||||||| |||||  ||||||||||||| || ||||  || ||    
T  29469650 gagcttctggaagagctgcttctgaagctttagaagctggttctgaagaagtagcttctgaagcttgcttgtctttcaaagcttgagaaagcagtttcac 29469551  T
Q  214 tccttccttgacagtttcctcttctaactcagaagccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttca 313  Q
    ||| ||||  |||||||||| ||| | ||||| |||||| | |||||    ||  || ||||||||| | |||| ||| ||||||||||| ||||||||     
T  29469550 tccctcctgaacagtttccttttcaacctcagcagccaacgcagcaaactcagcagccttctcaggagctagcttataccctgcagccttaagttgttcc 29469451  T
Q  314 tccctttgcttct 326  Q
    || |||| |||||    
T  29469450 tctcttttcttct 29469438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 14 - 183
Target Start/End: Original strand, 19780670 - 19780830
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| ||| |||||||||||||||||||||||| ||||         |||||||||| ||| ||| | || ||| || ||| |||||||||| |    
T  19780670 tcatctgattcagttgatgatgatgagggtgaagagggtagaga---------aggaatctgagtatagatgtcaggtttggatgaattacctgaagatt 19780760  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||||||| |||||||||||||||| ||  |||||||||||||||||||||||||||| |||||    
T  19780761 gagcttctggatgaactgcttctggagcttttgaaactggttctgatgaagtagctcctgaagcttgctt 19780830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 20681780 - 20681620
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||||||         ||||| ||| ||| | || ||| || ||| |||||||||| |    
T  20681780 tcatctgattctgtggatgatgaagagggtgaagagggtagagatggaa---------tctgagtatagatgtcaggtttggatgaattacctgaagatt 20681690  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||||||| |||||||||||||||| ||  |||||||||||||||| ||||||||||| |||||    
T  20681689 gagcttctggatgaactgcttctggagcttttgagactggttctgatgaagttgctcctgaagcttgctt 20681620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 47 - 327
Target Start/End: Complemental strand, 14255775 - 14255498
Alignment:
Q  47 gagggtggagatggaaggtcaggaatctgattattgatcttagcttt----tgaggaag--tacctgaagaatgagcttctggatgagctgcttctggag 140  Q
    ||||||| |||||||||||||||||||||| ||||||  ||||||||    |||| | |  |||||||||||||||||||||| ||||  ||||||| ||    
T  14255775 gagggtgaagatggaaggtcaggaatctgaatattgactttagctttaggttgagaaggaatacctgaagaatgagcttctggttgagtagcttctgaag 14255676  T
Q  141 ctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgactccttccttgacagtttcctcttctaa 240  Q
    ||         |||||||| |||||||||||||||||||||||||||||||||| ||||  || |||     ||||||||||||||||||| ||| | |     
T  14255675 ct---------ggttctgaagaagtagctcctgaagcatgctttcctttcaaagtttgtcttaacaaagctgctccttccttgacagtttcttctgcaat 14255585  T
Q  241 ctcagaagccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttcatccctttgcttctc 327  Q
     |||| ||| || | || |||    |  |||||||||||| | |||||||| ||||| |||||||| |||||||| |||||||||||    
T  14255584 ttcagcagctaatgaagaaatttctgcagctttctcaggagcaagctcataccctgctgccttgagctgttcatctctttgcttctc 14255498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 6218641 - 6218481
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| ||| |||||||||||||||||| ||||| |||||||||         ||||| ||| ||| | || ||| || ||| |||||||||| |    
T  6218641 tcatctgattcagttgatgatgatgagggtgaaaagggtagagatggaa---------tctgagtatagatgtcaggtttggatgaattacctgaagatt 6218551  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||||||| |||||||||||||||| ||  |||||||||||||||| |||| |||||| |||||    
T  6218550 gagcttctggatgaactgcttctggagcttttgaaactggttctgatgaagtggctcatgaagcttgctt 6218481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 183
Target Start/End: Original strand, 13123953 - 13124113
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||||||         ||||| ||| ||| | || ||| || ||| |||||||||| |    
T  13123953 tcatctgattctgtggatgatgaagagggtgaagagggtagagatggaa---------tctgagtatagatgtcaggtttcgatgaattacctgaagatt 13124043  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||||||| |||||||||||||||| ||  | |||||||||||||| ||||||||||| |||||    
T  13124044 gagcttctggatgaactgcttctggagcttttgaaacaggttctgatgaagttgctcctgaagcttgctt 13124113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 183
Target Start/End: Original strand, 14467879 - 14468039
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||||||         ||||| ||| ||| | || ||| || ||| |||||||||| |    
T  14467879 tcatctgattctgtggatgatgaagagggtgaagagggtagagatggaa---------tctgagtatagatgtcaggtttggatgaaatacctgaagatt 14467969  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||||||| |||||||||||||||| ||  | |||||||||||||| ||||||||||| |||||    
T  14467970 gagcttctggatgaactgcttctggagcttttgaaacaggttctgatgaagttgctcctgaagcttgctt 14468039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 37868711 - 37868865
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| ||| |||||||||||||||||||||||| ||||         |||||||||| ||| ||| | || ||| || ||| |||||||||| |    
T  37868711 tcatctgattcagttgatgatgatgagggtgaagagggtagaga---------aggaatctgagtatagatatcagttttggatgaattacctgaagatt 37868801  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagc 177  Q
    |||||||||| ||| |||||||||||||||| ||  | |||||||| |||||||||||||||||    
T  37868802 gagcttctgggtgaactgcttctggagcttttgaaacaggttctgaagaagtagctcctgaagc 37868865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 37877229 - 37877383
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| ||| |||||||||||||||||||||||| ||||         |||||||||| ||| ||| | || ||| || ||| |||||||||| |    
T  37877229 tcatctgattcagttgatgatgatgagggtgaagagggtagaga---------aggaatctgagtatagatatcagttttggatgaattacctgaagatt 37877319  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagc 177  Q
    |||||||||| ||| |||||||||||||||| ||  | |||||||| |||||||||||||||||    
T  37877320 gagcttctgggtgaactgcttctggagcttttgaaacaggttctgaagaagtagctcctgaagc 37877383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 8777004 - 8777085
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || ||||||||||||||||| ||||||||||| |||||    
T  8777004 tacctgaagactgagcttctggatgaactgcttctggagcttctgaagctggttctgatgaagttgctcctgaagcttgctt 8777085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 18486337 - 18486418
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  |||||||||||||| ||||| ||||||||||| |||||    
T  18486337 tacctgaagactgagcttctggatgaactgcttctggagcttctgatgctggttctgaagaagttgctcctgaagcttgctt 18486418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 28322758 - 28322677
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || ||||||||||||||||| ||||||||||| |||||    
T  28322758 tacctgaagactgagcttctggatgaactgcttctggagcttctgaagctggttctgatgaagttgctcctgaagcttgctt 28322677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 38197086 - 38197167
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || ||||||||||||||||| ||||||||||| |||||    
T  38197086 tacctgaagactgagcttctggatgaactgcttctggagcttctgaagctggttctgatgaagttgctcctgaagcttgctt 38197167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 39374401 - 39374482
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || ||||||||||||||||| ||||||||||| |||||    
T  39374401 tacctgaagactgagcttctggatgaactgcttctggagcttctgaagctggttctgatgaagttgctcctgaagcttgctt 39374482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 11280920 - 11280839
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || ||| ||||||||||||| ||||||||||| |||||    
T  11280920 tacctgaagactgagcttctggatgaactgcttctggagcttctgaagcttgttctgatgaagttgctcctgaagcttgctt 11280839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 327
Target Start/End: Original strand, 4406623 - 4406930
Alignment:
Q  11 acatcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttt----tgaggaag--tac 104  Q
    ||||||||||| | |||||| ||||||||||      |||||| |||||||||||||||||||||| ||||| | ||||||||    |||| | |  |||    
T  4406623 acatcatctgagtcagtggaagatgatgagg------agggtgaagatggaaggtcaggaatctgagtattgcttttagctttaggttgagaaggaatac 4406716  T
Q  105 ctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatag 204  Q
    || |||||||||||||||| ||||| ||||||| ||||         ||||| || ||||||||| ||||||  ||||||||||| |  |||||   ||     
T  4406717 ctaaagaatgagcttctggttgagcagcttctgaagct---------ggttcggaagaagtagcttctgaagtgtgctttccttttagggcttgccttaa 4406807  T
Q  205 caacttgactccttccttgacagtttcctcttctaactcagaagccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttg 304  Q
    ||  ||  |||||||| | |||||||||||||| |  |||| |||||||| ||||||    |  |||||||||||| | |||||||| ||||| ||||||    
T  4406808 cagatttgctccttccctaacagtttcctcttcaagttcagcagccaaggaagcaatttctgcagctttctcaggagcaagctcataccctgctgccttg 4406907  T
Q  305 agttgttcatccctttgcttctc 327  Q
    || |||||||| |||||||||||    
T  4406908 agctgttcatctctttgcttctc 4406930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 5512982 - 5513063
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||||| ||  |||||||||||||||| | ||||||||| |||||    
T  5512982 tacctgaggactgagcttctggatgaattgcttctggagcttttgaaactggttctgatgaagttgttcctgaagcttgctt 5513063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 5545541 - 5545460
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||||| ||  |||||||||||||||| | ||||||||| |||||    
T  5545541 tacctgaggactgagcttctggatgaattgcttctggagcttttgaaactggttctgatgaagttgttcctgaagcttgctt 5545460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 16427678 - 16427597
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||| | ||  |||||||||||||||| ||||||||||| |||||    
T  16427678 tacctgaggactgagcttctggatgaattgcttctggagctgttgaaactggttctgatgaagttgctcctgaagcttgctt 16427597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 16389487 - 16389318
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattatt-gatcttagcttttgaggaagtacctgaagaa 112  Q
    ||||||||||  || |||||||||||| ||||||| ||||||   ||||||  |||||||||| |||| |||   |||||| || ||| ||||| |||||    
T  16389487 tcatctgattctgttgatgatgatgagagtgaagaaggtggaataggaagggtaggaatctgagtattagatgg-agctttagatgaattacctaaagaa 16389389  T
Q  113 tgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||| ||||| ||||| ||||||||||||||| |  |  || |||||||| || ||||||||||| |||||    
T  16389388 tgaggttctgaatgaggtgcttctggagcttttgtagaaggatctgatgatgtggctcctgaagcttgctt 16389318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 5874221 - 5874140
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||| | ||  |||| ||||||||||| ||||||||||| |||||    
T  5874221 tacctgaggactgagcttctggatgaattgcttctggagctgttgaaactggatctgatgaagttgctcctgaagcttgctt 5874140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 12294710 - 12294629
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||| | ||  |||| ||||||||||| ||||||||||| |||||    
T  12294710 tacctgaggactgagcttctggatgaattgcttctggagctgttgaaactggatctgatgaagttgctcctgaagcttgctt 12294629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 24392030 - 24391949
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||| | ||  |||| ||||||||||| ||||||||||| |||||    
T  24392030 tacctgaggactgagcttctggatgaattgcttctggagctgttgaaactggatctgatgaagttgctcctgaagcttgctt 24391949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 41685980 - 41686061
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||| | ||  |||| ||||||||||| ||||||||||| |||||    
T  41685980 tacctgaggactgagcttctggatgaattgcttctggagctgttgaaactggatctgatgaagttgctcctgaagcttgctt 41686061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 24662188 - 24662267
Alignment:
Q  104 cctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||| || |||||||||||||||  ||||||||||||| | ||  |||| ||||||||||| ||||||||||| |||||    
T  24662188 cctgaggactgagcttctggatgaattgcttctggagctgttgaaactggatctgatgaagttgctcctgaagcttgctt 24662267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 183
Target Start/End: Complemental strand, 5625892 - 5625822
Alignment:
Q  113 tgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||||||||  ||||||||||||| | ||  |||| ||||||||||| ||||||||||| |||||    
T  5625892 tgagcttctggatgaattgcttctggagctgttgaaactggatctgatgaagttgctcctgaagcttgctt 5625822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 1792282 - 1792233
Alignment:
Q  149 gctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttg 198  Q
    ||||||||||| ||||||| || |||||||| ||||||||||||||||||    
T  1792282 gctggttctgaagaagtagttcttgaagcattctttcctttcaaagcttg 1792233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 4746035 - 4746116
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||| | ||   ||| ||||||||||| ||||||||||| |||||    
T  4746035 tacctgaggactgagcttctggatgaattgcttctggagctgttgaaattggatctgatgaagttgctcctgaagcttgctt 4746116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 28322837 - 28322789
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaa 62  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||||||    
T  28322837 tcatctgattctgtggatgatgaagagggtgaagagggtagagatggaa 28322789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 38197007 - 38197055
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaa 62  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||||||    
T  38197007 tcatctgattctgtggatgatgaagagggtgaagagggtagagatggaa 38197055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 5512903 - 5512950
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatgga 61  Q
    ||||||||||  ||||||||||| ||||||||||||||| ||||||||    
T  5512903 tcatctgattctgtggatgatgaagagggtgaagagggtagagatgga 5512950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 5545620 - 5545573
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatgga 61  Q
    ||||||||||  ||||||||||| ||||||||||||||| ||||||||    
T  5545620 tcatctgattctgtggatgatgaagagggtgaagagggtagagatgga 5545573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 315
Target Start/End: Complemental strand, 9004155 - 9004053
Alignment:
Q  213 ctccttccttgacagtttcctcttctaactcagaagccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttc 312  Q
    |||||||| | |||||||| ||||| | ||||| |||||| | |||||| |  |  |||||||||| |||||||||||| ||||| || ||||| |||||    
T  9004155 ctccttccctaacagtttcttcttcaatctcagcagccaaagaagcaattaccgcagctttctcagcatccagctcataccctgctgctttgagctgttc 9004056  T
Q  313 atc 315  Q
    |||    
T  9004055 atc 9004053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 4745956 - 4746000
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  4745956 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 4746000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 5625982 - 5625938
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  5625982 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 5625938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 5874300 - 5874256
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  5874300 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 5874256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 11280999 - 11280951
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaa 62  Q
    ||||||||||  || |||||||| ||||||||||||||| |||||||||    
T  11280999 tcatctgattctgttgatgatgaagagggtgaagagggtagagatggaa 11280951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 12294789 - 12294745
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  12294789 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 12294745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 297
Target Start/End: Original strand, 14583744 - 14583828
Alignment:
Q  213 ctccttccttgacagtttcctcttctaactcagaagccaaggtagcaataatagatgctttctcaggatccagctcatatcctgc 297  Q
    ||||||||||||||||||||||||| || |||| ||| || |    ||||||||  |||||||||| ||||| |||||| |||||    
T  14583744 ctccttccttgacagtttcctcttccaattcagcagctaatgagttaataatagcagctttctcagcatccacctcataccctgc 14583828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 16427757 - 16427713
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  16427757 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 16427713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 24392109 - 24392065
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  24392109 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 24392065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 24662107 - 24662151
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  24662107 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 24662151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 41685901 - 41685945
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  41685901 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 41685945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 137; Significance: 2e-71; HSPs: 3)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 14 - 326
Target Start/End: Complemental strand, 40883 - 40580
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| ||||||||||||||||||||||||         ||||||||||||||||||| ||||||  ||||||||| |||||||||||||||| |    
T  40883 tcatctgattcagtggatgatgatgagggtgaaga---------tggaaggtcaggaatctgagtattgacattagcttttaaggaagtacctgaagagt 40793  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgac 213  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||| |||| ||  || ||    
T  40792 gaacttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctaaagcatgcttgtctttcaaagcttgagataacagttttac 40693  T
Q  214 tccttccttgacagtttcctcttctaactcagaagccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttca 313  Q
    |||||||| ||||||||| | ||| |  |||| |||||| | |||||    ||  || ||||||||| | |||| ||||||||||||||||||||||||     
T  40692 tccttcctagacagtttctttttcaacttcagcagccaaagcagcaaactcagcagccttctcaggagcaagcttatatcctgcagccttgagttgttcc 40593  T
Q  314 tccctttgcttct 326  Q
    ||||||| |||||    
T  40592 tcccttttcttct 40580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 33426 - 33507
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||| | ||  |||| ||||||||||| ||||||||||| |||||    
T  33426 tacctgaggactgagcttctggatgaattgcttctggagctgttgaaactggatctgatgaagttgctcctgaagcttgctt 33507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 33347 - 33391
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  33347 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 33391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 133; Significance: 4e-69; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 14 - 326
Target Start/End: Original strand, 19420648 - 19420951
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||||||||||||||||||||||||||||         ||||||||||||||||||| ||||||| ||||||||| | |||||||||||||| |    
T  19420648 tcatctgatttagtggatgatgatgagggtgaaga---------tggaaggtcaggaatctgagtattgatattagcttttaaagaagtacctgaagagt 19420738  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgac 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||| |||| ||  || ||    
T  19420739 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcctgcttgtctttcaaagcttgagataacagttttac 19420838  T
Q  214 tccttccttgacagtttcctcttctaactcagaagccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttca 313  Q
    ||| |||| ||||| ||| | ||| | ||||| |||||| | |||||    ||  || ||||||||| | |||| ||| ||||||||||||||||||||     
T  19420839 tccctcctggacagcttctttttcaacctcagcagccaaagcagcaaactcagcagccttctcaggagcaagcttataccctgcagccttgagttgttcc 19420938  T
Q  314 tccctttgcttct 326  Q
    || |||| |||||    
T  19420939 tctcttttcttct 19420951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 14 - 312
Target Start/End: Complemental strand, 30323259 - 30322969
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgag-gaagtacctgaagaa 112  Q
    |||||||||| |||||||||||||||||||||||| ||         |||||||||||||||| ||||||| | || |||| || ||||||||||||||     
T  30323259 tcatctgattcagtggatgatgatgagggtgaagaagg---------aaggtcaggaatctgagtattgatgtcagttttttagtgaagtacctgaagag 30323169  T
Q  113 tgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttga 212  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||| ||||||| |||||  ||||||||||||| |||||||  || |    
T  30323168 tgagcttctggatgagctgcttctgaagctttagaagctggttctgaagaagtagcttctgaagcctgcttgtctttcaaagcttgagatagcagtttca 30323069  T
Q  213 ctccttccttgacagtttcctcttctaactcagaagccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttc 312  Q
    |||| ||||  |||||||||| ||| | ||||| |||||| | |||||    ||  || ||||||||| | |||| ||| ||||||||||||||||||||    
T  30323068 ctccctcctgaacagtttccttttcaacctcagcagccaacgcagcaaactcagcagccttctcaggagctagcttataccctgcagccttgagttgttc 30322969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 134 - 327
Target Start/End: Complemental strand, 23467765 - 23467572
Alignment:
Q  134 tctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgactccttccttgacagtttcct 233  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||||   ||||| ||||||||||| ||||||||||||||||| |||||||||||    
T  23467765 tctggagctttagaagctggttcagatgaagtagctcctgaagcatgcttatttttcagagcttgtgataacaacttgactccttcctggacagtttcct 23467666  T
Q  234 cttctaactcagaagccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttcatccctttgcttctc 327  Q
    |||||||||||| ||| || | ||| ||   ||  || || |||| | | |||||||||||||||||||||||||| |||||||||||||||||    
T  23467665 cttctaactcagcagctaaagcagccatctcagcagccttttcagtagcaagctcatatcctgcagccttgagttgctcatccctttgcttctc 23467572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 14 - 252
Target Start/End: Original strand, 19227231 - 19227460
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| |||||||||||||||||||||||||||         |||||||||||||||| ||||||| | || ||||   |||||||||||||| |    
T  19227231 tcatctgattcagtggatgatgatgagggtgaagaggg---------aaggtcaggaatctgagtattgatgtcagtttttagagaagtacctgaagagt 19227321  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgac 213  Q
    ||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||| || |||| |||||   |||||||||||| |||||||  || ||    
T  19227322 gaggttctggatgagctgcttctgaagctttagaagctggttctgatgaagtagcttctaaagcctgcttgtttttcaaagcttgagatagcagtttcac 19227421  T
Q  214 tccttccttgacagtttcctcttctaactcagaagccaa 252  Q
    ||| ||||  |||||||||| ||| | ||||| ||||||    
T  19227422 tccctcctgaacagtttccttttcaacctcagcagccaa 19227460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 14 - 183
Target Start/End: Original strand, 26113539 - 26113699
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| ||| |||||||||||||||||||||||| |||||||||         ||||| ||| ||| | || ||| || ||| |||||||||| |    
T  26113539 tcatctgattcagttgatgatgatgagggtgaagagggtagagatggaa---------tctgagtatagatgtcaggtttggatgaattacctgaagatt 26113629  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||||| |||| |||||||||||||||| ||  |||||||||||||||||||||||||||| |||||    
T  26113630 gagcttctgaatgaactgcttctggagcttttgaaactggttctgatgaagtagctcctgaagcttgctt 26113699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 32086321 - 32086161
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||||||         ||||| ||| ||| | || ||| || ||| |||||||||| |    
T  32086321 tcatctgattctgtggatgatgaagagggtgaagagggtagagatggaa---------tctgagtatagatgtcaggtttggatgaattacctgaagatt 32086231  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||||||| |||||||||||||||| ||  | |||||||||||||| ||||||||||| |||||    
T  32086230 gagcttctggatgaactgcttctggagcttttgaaacaggttctgatgaagttgctcctgaagcttgctt 32086161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 14 - 206
Target Start/End: Original strand, 19130976 - 19131159
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| ||| |||||||||||||||||||||||| |||          |||||||||| ||| ||| | || ||| || ||| |||||||||| |    
T  19130976 tcatctgattcagttgatgatgatgagggtgaagagggtagagt---------aggaatctgagtatagatatcagttttggatgaaatacctgaagatt 19131066  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagca 206  Q
    |||||||||||||| |||||||||||||||| ||  | |||||||| ||||| ||||||||||| |||||    ||||| |||||||||||||    
T  19131067 gagcttctggatgaactgcttctggagcttttgaaacaggttctgaagaagtggctcctgaagcttgcttattcttcaaggcttgtgatagca 19131159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 14 - 183
Target Start/End: Original strand, 6153314 - 6153474
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    ||||||||||  ||||||| ||| ||||||||||||||| |||||||||         ||||| ||| ||| | || ||| || ||| |||||||||| |    
T  6153314 tcatctgattctgtggatggtgaagagggtgaagagggtagagatggaa---------tctgagtatagatgtcaggtttggatgaattacctgaagatt 6153404  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||||||| |||||||||||||||| ||  | |||||||||||||| ||||||||||| |||||    
T  6153405 gagcttctggatgaactgcttctggagcttttgaaacaggttctgatgaagttgctcctgaagcttgctt 6153474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 36295234 - 36295315
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || ||||||||||||||||| ||||||||||| |||||    
T  36295234 tacctgaagactgagcttctggatgaactgcttctggagcttctgaagctggttctgatgaagttgctcctgaagcttgctt 36295315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 13686534 - 13686453
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| ||||||||||||| |  || ||||||||||||||||| ||||||||||| |||||    
T  13686534 tacctgaagactgagcttctggatgaactgcttctggagcatctgaagctggttctgatgaagttgctcctgaagcttgctt 13686453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 36080254 - 36080335
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || ||| ||||||||||||| || |||||||| |||||    
T  36080254 tacctgaagactgagcttctggatgaactgcttctggagcttctgaagcttgttctgatgaagttgcacctgaagcttgctt 36080335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 244120 - 244201
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||||| ||  |||||||||||||||| | ||||||||| |||||    
T  244120 tacctgaggactgagcttctggatgaattgcttctggagcttttgaaactggttctgatgaagttgttcctgaagcttgctt 244201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 797490 - 797571
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||||| ||  |||||||||||||||| | ||||||||| |||||    
T  797490 tacctgaggactgagcttctggatgaattgcttctggagcttttgaaactggttctgatgaagttgttcctgaagcttgctt 797571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 3357190 - 3357109
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||| | ||  |||| ||||||||||| ||||||||||| |||||    
T  3357190 tacctgaggactgagcttctggatgaattgcttctggagctgttgaaactggatctgatgaagttgctcctgaagcttgctt 3357109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 9343409 - 9343490
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||| | ||  |||| ||||||||||| ||||||||||| |||||    
T  9343409 tacctgaggactgagcttctggatgaattgcttctggagctgttgaaactggatctgatgaagttgctcctgaagcttgctt 9343490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 44483431 - 44483512
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||| | ||  |||| ||||||||||| ||||||||||| |||||    
T  44483431 tacctgaggactgagcttctggatgaattgcttctggagctgttgaaactggatctgatgaagttgctcctgaagcttgctt 44483512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 326
Target Start/End: Complemental strand, 25682295 - 25682244
Alignment:
Q  275 tcaggatccagctcatatcctgcagccttgagttgttcatccctttgcttct 326  Q
    |||||| | |||||||| |||||||||||||||||||| |||||||||||||    
T  25682295 tcaggagcaagctcataccctgcagccttgagttgttcctccctttgcttct 25682244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 29079021 - 29079102
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||| ||  |||||||||||| || ||  |||||||||||||||| | ||||||||| |||||    
T  29079021 tacctgaggactgagcttctggaggaattgcttctggagcctttgaaactggttctgatgaagttgttcctgaagcttgctt 29079102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 244041 - 244085
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  244041 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 244085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 797411 - 797455
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  797411 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 797455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 3357269 - 3357225
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  3357269 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 3357225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 9343330 - 9343374
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  9343330 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 9343374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 13686613 - 13686565
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaa 62  Q
    ||||||||||  || |||||||| ||||||||||||||| |||||||||    
T  13686613 tcatctgattctgttgatgatgaagagggtgaagagggtagagatggaa 13686565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 29078942 - 29078986
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  29078942 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 29078986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 44483352 - 44483396
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  44483352 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 44483396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 131; Significance: 6e-68; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 9161995 - 9162204
Alignment:
Q  13 atcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaa 112  Q
    ||||||||||| ||||||||||||||||||||||||         ||||||||||||||||||| ||||||  ||||||||| ||||||||||||||||     
T  9161995 atcatctgattcagtggatgatgatgagggtgaaga---------tggaaggtcaggaatctgagtattgacattagcttttaaggaagtacctgaagag 9162085  T
Q  113 tgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttga 212  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||| ||| || |    
T  9162086 tgagcttctagatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgcttatctttcaaagcttgagataacaatttta 9162185  T
Q  213 ctccttccttgacagtttc 231  Q
    ||||||||| |||||||||    
T  9162186 ctccttcctggacagtttc 9162204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 14 - 252
Target Start/End: Complemental strand, 15886309 - 15886080
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| |||||||||||||||||||||||| ||         ||| |||||||||||| ||||||| | ||||||| | |||||||||||||| |    
T  15886309 tcatctgattcagtggatgatgatgagggtgaagaagg---------aagttcaggaatctgagtattgatatcagcttttaaagaagtacctgaagagt 15886219  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgac 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||| |||||||  || ||    
T  15886218 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcctgcttgtctttcaaagcttgagatagcagttttac 15886119  T
Q  214 tccttccttgacagtttcctcttctaactcagaagccaa 252  Q
    ||| |||| ||||||||||| ||| | ||||| ||||||    
T  15886118 tccctcctggacagtttccttttcaacctcagcagccaa 15886080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 14 - 312
Target Start/End: Original strand, 10560442 - 10560731
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| |||||||||||||||||||||||| ||         |||||||| ||||||| ||||||| | || ||||   |||||||||||||| |    
T  10560442 tcatctgattcagtggatgatgatgagggtgaagaagg---------aaggtcagtaatctgagtattgatgtcagtttttagtgaagtacctgaagagt 10560532  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgac 213  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||| |||||  ||||||||||||| |||||||  || ||    
T  10560533 gagcttcttgatgagctgcttctgaagctttagaagctggttctgatgaagtagcttctgaagcctgcttgtctttcaaagcttgagatagcagtttcac 10560632  T
Q  214 tccttccttgacagtttcctcttctaactcagaagccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttc 312  Q
    ||| ||||  |||||||||| ||| | ||||| |||||| |||||||    ||  || ||||||||| | |||| ||| ||||||||||||||||||||    
T  10560633 tccctcctgaacagtttccttttcaacctcagcagccaacgtagcaaactcagcagccttctcaggagctagcttataccctgcagccttgagttgttc 10560731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 47 - 233
Target Start/End: Complemental strand, 21001035 - 21000849
Alignment:
Q  47 gagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaatgagcttctggatgagctgcttctggagctttag 146  Q
    ||||||| ||| |||||||||||||||||| || |||| | || ||||   || ||||||||||| |||||||||||| || ||||||||| ||||| ||    
T  21001035 gagggtgaagaaggaaggtcaggaatctgagtactgatgtcagtttttagtgatgtacctgaagagtgagcttctggaagatctgcttctgaagcttgag 21000936  T
Q  147 atgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgactccttccttgacagtttcct 233  Q
    | ||||||||||| ||||||||||||||||| |||||   |||||||||||| || |||| ||| ||||| ||||  ||||||||||    
T  21000935 aagctggttctgaagaagtagctcctgaagcttgcttgtttttcaaagcttgagaaagcagcttcactccctcctgaacagtttcct 21000849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 6875903 - 6875743
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| ||| |||||||||||||||||||||||| ||||         |||||||||| ||| ||| | || ||| || ||| |||||||||| |    
T  6875903 tcatctgattcagttgatgatgatgagggtgaagagggtagaga---------aggaatctgagtatagatatcaggtttggatgaattacctgaagatt 6875813  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||||||| |||||||||||||||| |   | |||||||||||||||||||||||||| |||||    
T  6875812 gagcttctggatgaactgcttctggagcttttgcaacaggttctgatgaagtagctcctgaagcttgctt 6875743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 14 - 206
Target Start/End: Original strand, 5687758 - 5687941
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| ||| |||||||||||||||||||||||| |||          |||||||||| ||| ||| | || ||| || ||| |||||||||| |    
T  5687758 tcatctgattcagttgatgatgatgagggtgaagagggtagagt---------aggaatctgagtatagatatcagttttggatgaaatacctgaagagt 5687848  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagca 206  Q
    ||||||||||||||||||||||||||||||| ||  | |||||||| ||||| ||||||||||| |||||    ||||| |||||||||||||    
T  5687849 gagcttctggatgagctgcttctggagcttttgaaacaggttctgaagaagtggctcctgaagcttgcttattcttcaaggcttgtgatagca 5687941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 183
Target Start/End: Original strand, 169124 - 169284
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||||||         ||||| ||| ||| | || ||| || ||| |||||||||| |    
T  169124 tcatctgattctgtggatgatgaagagggtgaagagggtagagatggaa---------tctgagtatagatgtcaggtttggatgaattacctgaagatt 169214  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||||||| |||||||||||||||| ||  | |||||||||||||| ||||||||||| |||||    
T  169215 gagcttctggatgaactgcttctggagcttttgaaacaggttctgatgaagttgctcctgaagcttgctt 169284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 2714224 - 2714143
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||| || ||||||||||||||||| ||||||||||| |||||    
T  2714224 tacctgaagactgagcttctggatgaactgcttctggagcttttgaagctggttctgatgaagttgctcctgaagcttgctt 2714143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 183
Target Start/End: Original strand, 4214244 - 4214404
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    ||||||||||  ||||||||||| ||||||||||||||| ||||| |||         ||||| ||| ||| | || ||| || ||| |||||||||| |    
T  4214244 tcatctgattctgtggatgatgaagagggtgaagagggtagagattgaa---------tctgagtatagatgtcaggtttggatgaattacctgaagatt 4214334  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||||||| |||||||||||||||| ||  |||||||||||||||| ||||||||||| |||||    
T  4214335 gagcttctggatgaactgcttctggagcttttgaaactggttctgatgaagttgctcctgaagcttgctt 4214404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 327
Target Start/End: Complemental strand, 25209649 - 25209384
Alignment:
Q  47 gagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaatgagcttctggatgagctgcttctggagctttag 146  Q
    ||||||| |||||||||||||||||||||| ||||||  ||||||||      |||||||||||||||||||||||| ||||| ||||||| ||||        
T  25209649 gagggtgaagatggaaggtcaggaatctgaatattgactttagcttt------agtacctgaagaatgagcttctggttgagcagcttctgaagct---- 25209560  T
Q  147 atgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgactccttccttgacagtttcctcttctaactcaga 246  Q
         |||||||| ||||||||||||||||||||||| |||||||  ||||||  || ||    | |||||||||| ||||| || ||| | | ||||      
T  25209559 -----ggttctgaagaagtagctcctgaagcatgcttacctttcagtgcttgtcttaacagagcggctccttccttaacagtatcttctgcaatctcaac 25209465  T
Q  247 agccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttcatccctttgcttctc 327  Q
    |||||| | |||||| || |  ||||||||| || | |||||||| ||||| ||||| |  |||||||| |||||||||||    
T  25209464 agccaaagaagcaattattgcagctttctcaagagcaagctcataccctgctgccttaaactgttcatctctttgcttctc 25209384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 1989864 - 1989945
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || ||||||||||||||||| ||||||||||| |||||    
T  1989864 tacctgaagactgagcttctggatgaactgcttctggagcttctgaagctggttctgatgaagttgctcctgaagcttgctt 1989945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 8010674 - 8010593
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || ||||||||||||||||| ||||||||||| |||||    
T  8010674 tacctgaagactgagcttctggatgaactgcttctggagcttctgaagctggttctgatgaagttgctcctgaagcttgctt 8010593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 11007483 - 11007564
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || ||||||||||||||||| ||||||||||| |||||    
T  11007483 tacctgaagactgagcttctggatgaactgcttctggagcttctgaagctggttctgatgaagttgctcctgaagcttgctt 11007564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 17958786 - 17958626
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    ||||||||||  || |||||||| ||||||||||||||| |||||||||         ||||| ||| ||| | || ||| || ||| |||||||||| |    
T  17958786 tcatctgattctgttgatgatgaagagggtgaagagggtagagatggaa---------tctgagtatagatgtcaggtttggatgaattacctgaagatt 17958696  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||||||| |||||||||||||||| ||  || ||||||||||||| ||||||||||| |||||    
T  17958695 gagcttctggatgaactgcttctggagcttttgaaacttgttctgatgaagttgctcctgaagcttgctt 17958626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 206
Target Start/End: Original strand, 9435489 - 9435672
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| ||| |||||||||||||||||||||||| |||          |||||||||| |||  || | || ||| || ||| |||||||||| |    
T  9435489 tcatctgattcagttgatgatgatgagggtgaagagggtagagt---------aggaatctgagtataaatatcagttttggatgaaatacctgaagatt 9435579  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagca 206  Q
    |||||||||||||| |||||||||||||||| ||  | |||||||| ||||| ||||||||||| |||||    ||||| |||||||||||||    
T  9435580 gagcttctggatgaactgcttctggagcttttgaaacaggttctgaagaagtggctcctgaagcttgcttattcttcaaggcttgtgatagca 9435672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 68 - 183
Target Start/End: Original strand, 8619637 - 8619752
Alignment:
Q  68 ggaatctgattattgatcttagcttttgaggaagtacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtag 167  Q
    ||||||||| ||| ||| | || ||| || ||| ||| |||||| ||||||||||||||| |||||||||||||||| ||  |||||||||||||||| |    
T  8619637 ggaatctgagtatagatgtcaggtttggatgaattacttgaagattgagcttctggatgaactgcttctggagcttttgaaactggttctgatgaagttg 8619736  T
Q  168 ctcctgaagcatgctt 183  Q
    |||||||||| |||||    
T  8619737 ctcctgaagcttgctt 8619752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 9087526 - 9087607
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||||| || ||||||||||||||||| ||||||||||| |||||    
T  9087526 tacctgaggactgagcttctggatgaattgcttctggagcttttgaagctggttctgatgaagttgctcctgaagcttgctt 9087607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 42868157 - 42868238
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || ||| ||||||||||||| ||||||||||| |||||    
T  42868157 tacctgaagactgagcttctggatgaactgcttctggagcttctgaagcttgttctgatgaagttgctcctgaagcttgctt 42868238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 26694352 - 26694271
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||||| ||  |||||||||||||||| ||||||||||| |||||    
T  26694352 tacctgaggactgagcttctggatgaattgcttctggagcttttgaaactggttctgatgaagttgctcctgaagcttgctt 26694271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 24737022 - 24737103
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||| | ||  |||| ||||||||||| ||||||||||| |||||    
T  24737022 tacctgaggactgagcttctggatgaattgcttctggagctgttgaaactggatctgatgaagttgctcctgaagcttgctt 24737103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 26398707 - 26398626
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||| | ||  |||| ||||||||||| ||||||||||| |||||    
T  26398707 tacctgaggactgagcttctggatgaattgcttctggagctgttgaaactggatctgatgaagttgctcctgaagcttgctt 26398626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 40050715 - 40050634
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||| ||  |||||||||||| || ||  |||||||||||||||| | ||||||||| |||||    
T  40050715 tacctgaggactgagcttctggaggaattgcttctggagcctttgaaactggttctgatgaagttgttcctgaagcttgctt 40050634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 11007404 - 11007452
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaa 62  Q
    ||||||||||  ||||||||||| |||||||||||||||| ||||||||    
T  11007404 tcatctgattctgtggatgatgaagagggtgaagagggtgaagatggaa 11007452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 22091480 - 22091532
Alignment:
Q  131 gcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||||||| ||  |||||||||||||||| ||||||||||| |||||    
T  22091480 gcttctggagcttttgaaactggttctgatgaagttgctcctgaagcttgctt 22091532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 40050794 - 40050747
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatgga 61  Q
    ||||||||||  ||||||||||| ||||||||||||||| ||||||||    
T  40050794 tcatctgattctgtggatgatgaagagggtgaagagggtagagatgga 40050747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 2714303 - 2714259
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  2714303 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 2714259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 9087447 - 9087491
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  9087447 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 9087491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 22091387 - 22091435
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaa 62  Q
    ||||||||||  || |||||||| ||||||||||||||| |||||||||    
T  22091387 tcatctgattctgttgatgatgaagagggtgaagagggtagagatggaa 22091435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 24736943 - 24736987
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  24736943 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 24736987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 26398786 - 26398742
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  26398786 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 26398742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 26694431 - 26694387
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  26694431 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 26694387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 128; Significance: 4e-66; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 14 - 329
Target Start/End: Original strand, 12360357 - 12360672
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| ||| || |||||||||||||||||||||| |  |||||||  |||||||||| ||||||| |||||||| || |||||||||||||| |    
T  12360357 tcatctgattcagttgaggatgatgagggtgaagagggtgaaattggaaggctaggaatctgagtattgattttagctttagatgaagtacctgaagagt 12360456  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgac 213  Q
     | ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||  ||||||||||||| |||||||  || ||    
T  12360457 taccttctggatgagctgcttctggagctttagaagctggttctgatgaagtagcttctgaggcatgcttgtctttcaaagcttgagatagcagtttcac 12360556  T
Q  214 tccttccttgacagtttcctcttctaactcagaagccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttca 313  Q
    ||| ||||  |||||||||| ||| | ||||| |||||| |||||||    ||  || || |||||| | |||| ||| ||||||||||||||||||||     
T  12360557 tccctcctgaacagtttccttttcaacctcagcagccaacgtagcaaactcagcagccttgtcaggagctagcttataccctgcagccttgagttgttcc 12360656  T
Q  314 tccctttgcttctcct 329  Q
    || |||| ||||||||    
T  12360657 tctcttttcttctcct 12360672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 13 - 326
Target Start/End: Original strand, 25796099 - 25796418
Alignment:
Q  13 atcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttt----tgaggaag--tacct 106  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||  ||||||||    |||| | |  |||||    
T  25796099 atcatctgattcagtggatgatgatgagggtgaagagggtgaagatggaaggtcaagaatctgagtattgactttagctttaggttgagaaggaatacct 25796198  T
Q  107 gaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagca 206  Q
    ||||||||| ||||||||||||||||||||| ||||||||| ||| ||||| |||||||||||||||||||||||||| |||||||||||| ||||| ||    
T  25796199 gaagaatgaccttctggatgagctgcttctgaagctttagaagcttgttctaatgaagtagctcctgaagcatgctttgctttcaaagcttatgataaca 25796298  T
Q  207 acttgactccttccttgacagtttcctcttctaactcagaagccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgag 306  Q
    |    |||||||||||||||||||| | |||||| |||| ||| ||   ||| |    ||  || ||||||||| | |||||||   |||||||||||||    
T  25796299 atgctactccttccttgacagtttcttgttctaattcagcagctaaaacagccaactcagcagccttctcaggagcaagctcatgctctgcagccttgag 25796398  T
Q  307 ttgttcatccctttgcttct 326  Q
    |||||| |||||||||||||    
T  25796399 ttgttcctccctttgcttct 25796418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 14 - 231
Target Start/End: Complemental strand, 20038406 - 20038198
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| |||||||||||||||||||||||| ||         || ||||||||||||| ||||||| ||||||||| | |||||||||||||| |    
T  20038406 tcatctgattcagtggatgatgatgagggtgaagaagg---------aacgtcaggaatctgagtattgatattagcttttaaagaagtacctgaagagt 20038316  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgac 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||| |||||||  || ||    
T  20038315 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcctgcttgtctttcaaagcttgagatagcagttttac 20038216  T
Q  214 tccttccttgacagtttc 231  Q
    ||| |||| |||||||||    
T  20038215 tccctcctggacagtttc 20038198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 14 - 326
Target Start/End: Complemental strand, 9121068 - 9120765
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    ||||||||||||||||||||||||||||||||||| ||         |||||||||||||||| || |||| | || ||||   || |||| |||||| |    
T  9121068 tcatctgatttagtggatgatgatgagggtgaagaagg---------aaggtcaggaatctgagtactgatgtcagtttttagtgatgtacttgaagagt 9120978  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgac 213  Q
    ||||||||||| || ||||||||| ||||| ||| ||||||||||| ||||||||||||||||| |||||  ||||||||||||| || |||| ||| ||    
T  9120977 gagcttctggaagatctgcttctgaagcttgagaagctggttctgaagaagtagctcctgaagcttgcttgtctttcaaagcttgagaaagcagcttcac 9120878  T
Q  214 tccttccttgacagtttcctcttctaactcagaagccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttca 313  Q
    ||| ||||  |||||||||| ||| | ||||| |||||| | |||||    ||  || ||||||||| | ||||  || ||||||||||| ||||||||     
T  9120877 tccctcctgaacagtttccttttcaacctcagcagccaacgcagcaaactcagcagccttctcaggagctagcttgtaccctgcagccttaagttgttcc 9120778  T
Q  314 tccctttgcttct 326  Q
    || |||| |||||    
T  9120777 tctcttttcttct 9120765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 34815755 - 34815595
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||||||         ||||| ||| ||| | || ||| || ||| |||||||||| |    
T  34815755 tcatctgattctgtggatgatgaagagggtgaagagggtagagatggaa---------tctgagtatagatgtcaggtttggatgaattacctgaagatt 34815665  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||||||| |||||||||||||||| ||  |||||||||||||||| ||||||||||| |||||    
T  34815664 gagcttctggatgaactgcttctggagcttttgaaactggttctgatgaagttgctcctgaagcttgctt 34815595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 26867068 - 26867149
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||| || ||||||||||||||||| ||||||||||| |||||    
T  26867068 tacctgaagactgagcttctggatgaactgcttctggagcttttgaagctggttctgatgaagttgctcctgaagcttgctt 26867149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 12725374 - 12725293
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || ||||||||||||||||| ||||||||||| |||||    
T  12725374 tacctgaagactgagcttctggatgaactgcttctggagcttctgaagctggttctgatgaagttgctcctgaagcttgctt 12725293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 27344012 - 27344093
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || ||||||||||||||||| ||||||||||| |||||    
T  27344012 tacctgaagactgagcttctggatgaactgcttctggagcttctgaagctggttctgatgaagttgctcctgaagcttgctt 27344093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 27404752 - 27404833
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || ||||||||||||||||| ||||||||||| |||||    
T  27404752 tacctgaagactgagcttctggatgaactgcttctggagcttctgaagctggttctgatgaagttgctcctgaagcttgctt 27404833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 4633195 - 4633276
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || | ||||||||||||||| ||||||||||| |||||    
T  4633195 tacctgaagactgagcttctggatgaactgcttctggagcttctgaagatggttctgatgaagttgctcctgaagcttgctt 4633276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 16932667 - 16932748
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||||| || ||||||||||||||||| ||||||||||| |||||    
T  16932667 tacctgaggactgagcttctggatgaattgcttctggagcttttgaagctggttctgatgaagttgctcctgaagcttgctt 16932748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 32309582 - 32309501
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || | ||||||||||||||| ||||||||||| |||||    
T  32309582 tacctgaagactgagcttctggatgaactgcttctggagcttctgaagatggttctgatgaagttgctcctgaagcttgctt 32309501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 206
Target Start/End: Original strand, 12857125 - 12857308
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    ||||||||||  ||||||||||| |||||||||||||||  ||||||||         ||||| ||| ||| | || ||| || ||| |||||||||| |    
T  12857125 tcatctgattctgtggatgatgaagagggtgaagagggtaaagatggaa---------tctgagtatagatgtcaggtttggatgaattacctgaagatt 12857215  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagca 206  Q
    |||||||||||||| |||||||||||||||| |  |  || |||||||| || ||||||||||| |||||    |||||||||||||| ||||    
T  12857216 gagcttctggatgaactgcttctggagcttttgtagaaggatctgatgatgtggctcctgaagcttgcttgttcttcaaagcttgtgaaagca 12857308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 149 - 324
Target Start/End: Complemental strand, 18923822 - 18923647
Alignment:
Q  149 gctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgactccttccttgacagtttcctcttctaactcagaag 248  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||   || |||     ||||||||||||||||||| ||| | | ||||| ||    
T  18923822 gctggttctgaagaagtagctcctgaagcattctttcctttcaaagcttgacttaacaaggatgctccttccttgacagtttcttctgcaatctcagcag 18923723  T
Q  249 ccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttcatccctttgctt 324  Q
    | || |  |||||    |  |||||||||||| | || || || ||||| |||||||| |||||||||||||||||    
T  18923722 ctaatgaggcaatttctgcagctttctcaggagcaagttcgtaccctgctgccttgagctgttcatccctttgctt 18923647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 27374991 - 27375121
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattatt-gatcttagcttttgaggaagtacctgaagaa 112  Q
    ||||||||||  |||||||||||||||||||||||||||||||  || |||    |||||||| |||| |||   |||||  || ||| |||||||||||    
T  27374991 tcatctgattctgtggatgatgatgagggtgaagagggtggagtaggtagggtgtgaatctgagtattagat-ggagcttgagatgaaatacctgaagaa 27375089  T
Q  113 tgagcttctggatgagctgcttctggagcttt 144  Q
    |||||||||| | ||| |||||||||||||||    
T  27375090 tgagcttctgaaggaggtgcttctggagcttt 27375121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 27465348 - 27465478
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattatt-gatcttagcttttgaggaagtacctgaagaa 112  Q
    ||||||||||  |||||||||||||||||||||||||||||||  || |||    |||||||| |||| |||   |||||  || ||| |||||||||||    
T  27465348 tcatctgattctgtggatgatgatgagggtgaagagggtggagtaggtagggtgtgaatctgagtattagat-ggagcttgagatgaaatacctgaagaa 27465446  T
Q  113 tgagcttctggatgagctgcttctggagcttt 144  Q
    |||||||||| | ||| |||||||||||||||    
T  27465447 tgagcttctgaaggaggtgcttctggagcttt 27465478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 3663677 - 3663758
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||| ||||||||| | ||  |||||||||||||||| ||||||||||| |||||    
T  3663677 tacctgaggactgagcttctggatgaattgcatctggagctgttgaaactggttctgatgaagttgctcctgaagcttgctt 3663758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 25789986 - 25790067
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||| | ||  |||| ||||||||||| ||||||||||| |||||    
T  25789986 tacctgaggactgagcttctggatgaattgcttctggagctgttgaaactggatctgatgaagttgctcctgaagcttgctt 25790067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 26027677 - 26027758
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||| | ||  |||| ||||||||||| ||||||||||| |||||    
T  26027677 tacctgaggactgagcttctggatgaattgcttctggagctgttgaaactggatctgatgaagttgctcctgaagcttgctt 26027758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 214 - 326
Target Start/End: Complemental strand, 25733203 - 25733091
Alignment:
Q  214 tccttccttgacagtttcctcttctaactcagaagccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttca 313  Q
    ||||||| | |||||||| ||||| | ||||| | |||||| |||||| | ||  |||||||||| ||| |||||||| || ||||| ||||||||||||    
T  25733203 tccttccctaacagtttcttcttcaatctcagcaaccaaggaagcaatcacagcagctttctcagcatcaagctcatacccagcagctttgagttgttca 25733104  T
Q  314 tccctttgcttct 326  Q
    || || |||||||    
T  25733103 tctctctgcttct 25733091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 32970430 - 32970378
Alignment:
Q  131 gcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||||||| ||  |||||||||||||||| ||||||||||| |||||    
T  32970430 gcttctggagcttttgaaactggttctgatgaagttgctcctgaagcttgctt 32970378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 32970523 - 32970475
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaa 62  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||||||    
T  32970523 tcatctgattctgtggatgatgaagagggtgaagagggtagagatggaa 32970475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 3663598 - 3663645
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatgga 61  Q
    ||||||||||  ||||||||||| ||||||||||||||| ||||||||    
T  3663598 tcatctgattatgtggatgatgaagagggtgaagagggtagagatgga 3663645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 13915637 - 13915750
Alignment:
Q  213 ctccttccttgacagtttcctcttctaactcagaagccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttc 312  Q
    |||||||||| ||||||| |||||| || |||| ||| || |  ||||| | ||  |||||||||| |||||||||||| ||| | || || ||||||||    
T  13915637 ctccttccttaacagtttgctcttccaattcagcagctaaagaggcaattacagcagctttctcagaatccagctcataccctactgctttaagttgttc 13915736  T
Q  313 atccctttgcttct 326  Q
    ||| |||| |||||    
T  13915737 atctcttttcttct 13915750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 12725453 - 12725405
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaa 62  Q
    ||||||||||  || |||||||| ||||||||||||||| |||||||||    
T  12725453 tcatctgattctgttgatgatgaagagggtgaagagggtagagatggaa 12725405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 16932588 - 16932632
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  16932588 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 16932632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 25789907 - 25789951
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  25789907 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 25789951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 26027598 - 26027642
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  26027598 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 26027642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 32309661 - 32309613
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaa 62  Q
    ||||||||||  || |||||||| ||||||||||||||| |||||||||    
T  32309661 tcatctgattctgttgatgatgaagagggtgaagagggtagagatggaa 32309613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0474 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 14 - 326
Target Start/End: Complemental strand, 3422 - 3119
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| |||||||||||||||||||||||| ||         |||||||||||||||| ||||||| | |||||||   |||||||||||||| |    
T  3422 tcatctgattcagtggatgatgatgagggtgaagaagg---------aaggtcaggaatctgagtattgatatcagcttttagagaagtacctgaagagt 3332  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgac 213  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||  ||||||||||||| ||||| |  || ||    
T  3331 gagcttctggatgagctgcttctgaagctttagatgctggttctgatgaagtagcttctgaagcctgcttgtctttcaaagcttgagatagtagtttcac 3232  T
Q  214 tccttccttgacagtttcctcttctaactcagaagccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttca 313  Q
    ||||||||  |||||||||| ||| | ||||| |||||| | |||||    ||  || |||||| || | |||| ||| ||||||||||||||||||||     
T  3231 tccttcctgtacagtttccttttcaacctcagcagccaacgcagcaaactcagcagccttctcaagagcaagcttataccctgcagccttgagttgttcc 3132  T
Q  314 tccctttgcttct 326  Q
    || |||| |||||    
T  3131 tctcttttcttct 3119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 1e-56; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 47 - 230
Target Start/End: Original strand, 26562761 - 26562944
Alignment:
Q  47 gagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaatgagcttctggatgagctgcttctggagctttag 146  Q
    ||||||| |||||||||||||||||||||| ||||||| | ||||||| | |||||||||||||  ||||||||||||||||||||||||||||||||||    
T  26562761 gagggtgaagatggaaggtcaggaatctgagtattgatatcagcttttaaagaagtacctgaagtgtgagcttctggatgagctgcttctggagctttag 26562860  T
Q  147 atgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgactccttccttgacagttt 230  Q
    | ||||||||||||||||||||||||||||| |||||  ||||||||||||| |||||||  || ||||| |||| ||||||||    
T  26562861 aagctggttctgatgaagtagctcctgaagcctgcttgtctttcaaagcttgagatagcagttttactccctcctggacagttt 26562944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 43 - 231
Target Start/End: Complemental strand, 23157846 - 23157658
Alignment:
Q  43 tgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaatgagcttctggatgagctgcttctggagct 142  Q
    |||||| |||| |||||||||||||||||||||| ||||||| ||| ||||| | |||||||||||||| ||||||||||||||||||||||||||||||    
T  23157846 tgaagatggtgaagatggaaggtcaggaatctgagtattgatattatcttttaaagaagtacctgaagagtgagcttctggatgagctgcttctggagct 23157747  T
Q  143 ttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgactccttccttgacagtttc 231  Q
    || |||||||||||||||||||||||||||||||| | |||  ||||||||||||| |||| ||  || ||||| |||| |||||||||    
T  23157746 tttgatgctggttctgatgaagtagctcctgaagcctacttgtctttcaaagcttgagatatcagttttactccctcctggacagtttc 23157658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 14 - 326
Target Start/End: Complemental strand, 152239 - 151936
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| |||||||||||||||||||||||| ||         |||||||||||||||| || |||| | || ||||   || ||||||||||| |    
T  152239 tcatctgattcagtggatgatgatgagggtgaagaagg---------aaggtcaggaatctgagtactgatgtcagtttttagtgatgtacctgaagagt 152149  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgac 213  Q
    ||||||||||| |||||||||||| ||||||||| ||||||||||| ||||||||| ||||||| |||||  ||||||||||||| || ||||  || ||    
T  152148 gagcttctggaagagctgcttctgaagctttagaagctggttctgaagaagtagcttctgaagcttgcttgtctttcaaagcttgagaaagcagtttcac 152049  T
Q  214 tccttccttgacagtttcctcttctaactcagaagccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttca 313  Q
     || ||||  |||||||||| ||| | ||||| |||||| | |||||    ||  || ||||||||| | |||| ||| ||||||||||| ||||||||     
T  152048 cccctcctgaacagtttccttttcaacctcagcagccaacgcagcaaactcagcagccttctcaggagctagcttataccctgcagccttaagttgttcc 151949  T
Q  314 tccctttgcttct 326  Q
    || |||| |||||    
T  151948 tctcttttcttct 151936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 37 - 231
Target Start/End: Original strand, 7681550 - 7681729
Alignment:
Q  37 tgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaatgagcttctggatgagctgcttct 136  Q
    ||||| ||| ||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||               ||||||    
T  7681550 tgaggatgatgagggtgaagatggaaggtcaggaatctgagtattgatcttagctttggaggaagtacctgaagagtga---------------gcttct 7681634  T
Q  137 ggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgactccttccttgacagtttc 231  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||   ||||||||||||||| |||||     |||||||||||||||||||    
T  7681635 ggagctttagatgctggttcagatgaagtagctcctgaagcatgcttatttttcaaagcttgtgacagcaatgctgctccttccttgacagtttc 7681729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 5648339 - 5648179
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    ||||||||||  || |||||||||||||||||||||||| ||||         |||||||||| ||| ||| | || ||| || ||| |||||||||| |    
T  5648339 tcatctgattctgttgatgatgatgagggtgaagagggtagaga---------aggaatctgagtatagatgtcaggtttggatgaattacctgaagatt 5648249  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||||||| ||||||||||||| || ||| |||||||||||||||||||||||||||| |||||    
T  5648248 gagcttctggatgaactgcttctggagcatttgatactggttctgatgaagtagctcctgaagcttgctt 5648179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 14 - 183
Target Start/End: Original strand, 4169493 - 4169653
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| ||| |||||||||||||||||||||||| ||||         |||||||||| ||| ||| | || ||| || ||| |||||||||| |    
T  4169493 tcatctgattcagttgatgatgatgagggtgaagagggtagaga---------aggaatctgagtatagatgtcaggtttggatgaattacctgaagatt 4169583  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||||||| |||||||||||||||| |   | |||||||||||||||||||||||||| |||||    
T  4169584 gagcttctggatgaactgcttctggagcttttgcaacaggttctgatgaagtagctcctgaagcttgctt 4169653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 14 - 206
Target Start/End: Original strand, 19181103 - 19181286
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| ||| |||||||||||||||||||||||| |||          |||||||||| ||| ||| | || ||| || ||| |||||||||| |    
T  19181103 tcatctgattcagttgatgatgatgagggtgaagagggtagagt---------aggaatctgagtatagatatcagttttggatgaaatacctgaagatt 19181193  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagca 206  Q
    |||||||||||||| |||||||||||||||| ||  | |||||||| ||||||||||||||||| |||||    ||||| |||||||||||||    
T  19181194 gagcttctggatgaactgcttctggagcttttgaaacaggttctgaagaagtagctcctgaagcttgcttattcttcaaggcttgtgatagca 19181286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 183
Target Start/End: Original strand, 21865854 - 21866014
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    ||||||||||  || |||||||| ||||||||||||||| |||||||||         ||||| ||| ||| | || ||| || ||| |||||||||| |    
T  21865854 tcatctgattctgttgatgatgaagagggtgaagagggtagagatggaa---------tctgagtatagatgtcaggtttggatgaattacctgaagatt 21865944  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||||||| |||||||||||||||| ||  |||||||||||||||| ||||||||||| |||||    
T  21865945 gagcttctggatgaactgcttctggagcttttgaaactggttctgatgaagttgctcctgaagcttgctt 21866014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 35399079 - 35398998
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || ||||||||||||||||| ||||||||||| |||||    
T  35399079 tacctgaagactgagcttctggatgaactgcttctggagcttctgaagctggttctgatgaagttgctcctgaagcttgctt 35398998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 38097344 - 38097425
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || ||||||||||||||||| ||||||||||| |||||    
T  38097344 tacctgaagactgagcttctggatgaactgcttctggagcttctgaagctggttctgatgaagttgctcctgaagcttgctt 38097425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 3173863 - 3173944
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || ||| ||||||||||||| ||||||||||| |||||    
T  3173863 tacctgaagactgagcttctggatgaactgcttctggagcttctgaagcttgttctgatgaagttgctcctgaagcttgctt 3173944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 5835488 - 5835569
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || | ||||||||||||||| ||||||||||| |||||    
T  5835488 tacctgaagactgagcttctggatgaactgcttctggagcttctgaagttggttctgatgaagttgctcctgaagcttgctt 5835569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 35646604 - 35646523
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| || ||||||||||||  || ||||||||||||||||| ||||||||||| |||||    
T  35646604 tacctgaagactgagcttctggatgaactacttctggagcttctgaagctggttctgatgaagttgctcctgaagcttgctt 35646523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 47616473 - 47616392
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || | ||||||||||||||| ||||||||||| |||||    
T  47616473 tacctgaagactgagcttctggatgaactgcttctggagcttctgaagttggttctgatgaagttgctcctgaagcttgctt 47616392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 7509531 - 7509612
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||| | ||  |||| ||||||||||| ||||||||||| |||||    
T  7509531 tacctgaggactgagcttctggatgaattgcttctggagctgttgaaactggatctgatgaagttgctcctgaagcttgctt 7509612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 36244997 - 36244916
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||| | ||  |||| ||||||||||| ||||||||||| |||||    
T  36244997 tacctgaggactgagcttctggatgaattgcttctggagctgttgaaactggatctgatgaagttgctcctgaagcttgctt 36244916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 51654441 - 51654360
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||| | ||  |||| ||||||||||| ||||||||||| |||||    
T  51654441 tacctgaggactgagcttctggatgaattgcttctggagctgttgaaactggatctgatgaagttgctcctgaagcttgctt 51654360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 191
Target Start/End: Original strand, 21163508 - 21163550
Alignment:
Q  149 gctggttctgatgaagtagctcctgaagcatgctttcctttca 191  Q
    ||||||||||| ||||||||||||||||||||||| |||||||    
T  21163508 gctggttctgaagaagtagctcctgaagcatgcttacctttca 21163550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 12621675 - 12621623
Alignment:
Q  131 gcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||||||| ||  |||||||||||||||| ||||||||||| |||||    
T  12621675 gcttctggagcttttgaaactggttctgatgaagttgctcctgaagcttgctt 12621623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 51654520 - 51654473
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatgga 61  Q
    ||||||||||  ||||||||||| ||||||||||||||| ||||||||    
T  51654520 tcatctgattctgtggatgatgaagagggtgaagagggtagagatgga 51654473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 7509452 - 7509496
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  7509452 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 7509496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 12621768 - 12621720
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaa 62  Q
    ||||||||||  || |||||||| ||||||||||||||| |||||||||    
T  12621768 tcatctgattctgttgatgatgaagagggtgaagagggtagagatggaa 12621720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 35399158 - 35399110
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaa 62  Q
    ||||||||||  || |||||||| ||||||||||||||| |||||||||    
T  35399158 tcatctgattctgttgatgatgaagagggtgaagagggtagagatggaa 35399110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 35646683 - 35646635
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaa 62  Q
    ||||||||||  || |||||||| ||||||||||||||| |||||||||    
T  35646683 tcatctgattctgttgatgatgaagagggtgaagagggtagagatggaa 35646635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 36245076 - 36245032
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  36245076 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 36245032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 47616552 - 47616504
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaa 62  Q
    ||||||||||  || |||||||| ||||||||||||||| |||||||||    
T  47616552 tcatctgattctgttgatgatgaagagggtgaagagggtagagatggaa 47616504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0398 (Bit Score: 111; Significance: 5e-56; HSPs: 4)
Name: scaffold0398
Description:

Target: scaffold0398; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 14 - 252
Target Start/End: Complemental strand, 2281 - 2043
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    ||||||||||  || ||||||||||||||||||||||||| |   ||||||||||| |||||| ||||||| | |||||| || |||||||||||||| |    
T  2281 tcatctgattcggttgatgatgatgagggtgaagagggtgaaataggaaggtcaggtatctgagtattgatttcagctttagatgaagtacctgaagagt 2182  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgac 213  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||    |||||||||||||| |||||     |    
T  2181 gagcttctggatgagctgcttctggagctttagatgcaggttcagatgaagtagctcctgatgcatgcttattcttcaaagcttgtgaaagcaatgctgc 2082  T
Q  214 tccttccttgacagtttcctcttctaactcagaagccaa 252  Q
    |||||| ||||||||||| |  |||||||||| ||||||    
T  2081 tccttctttgacagtttcttgctctaactcagcagccaa 2043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0398; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 14 - 252
Target Start/End: Complemental strand, 10536 - 10298
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    ||||||||||  || ||||||||||||||||||||||||| |   ||||||||||| |||||| ||||||| | |||||| || |||||||||||||| |    
T  10536 tcatctgattcggttgatgatgatgagggtgaagagggtgaaataggaaggtcaggtatctgagtattgatttcagctttagatgaagtacctgaagagt 10437  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgac 213  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||    |||||||||||||| |||||     |    
T  10436 gagcttctggatgagctgcttctggagctttagatgcaggttcagatgaagtagctcctgatgcatgcttattcttcaaagcttgtgaaagcaatgctgc 10337  T
Q  214 tccttccttgacagtttcctcttctaactcagaagccaa 252  Q
    |||||| ||||||||||| |  |||||||||| ||||||    
T  10336 tccttctttgacagtttcttgctctaactcagcagccaa 10298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0398; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 288 - 327
Target Start/End: Complemental strand, 2019 - 1980
Alignment:
Q  288 catatcctgcagccttgagttgttcatccctttgcttctc 327  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  2019 cataccctgcagccttgagttgctcatccctttgcttctc 1980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0398; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 288 - 327
Target Start/End: Complemental strand, 10274 - 10235
Alignment:
Q  288 catatcctgcagccttgagttgttcatccctttgcttctc 327  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  10274 cataccctgcagccttgagttgctcatccctttgcttctc 10235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1638 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold1638
Description:

Target: scaffold1638; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 59 - 207
Target Start/End: Original strand, 273 - 421
Alignment:
Q  59 ggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctg 158  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||| ||||||||||||||||||||| || ||||||     
T  273 ggaaggtcaggaatctgattattgatcttagctttggatgaagtacctgaagagtgagcttctggattagctgcttctggagctttagaagcaggttcta 372  T
Q  159 atgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaa 207  Q
    ||||||||||||||||||||||||||  ||||||| ||||||| |||||    
T  373 atgaagtagctcctgaagcatgcttttttttcaaatcttgtgaaagcaa 421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 99; Significance: 8e-49; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 14 - 252
Target Start/End: Complemental strand, 2198 - 1969
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| |||||||||||||||||||||||| ||         |||||||||||||||| ||||||| | || ||||   |||||||||||||| |    
T  2198 tcatctgattcagtggatgatgatgagggtgaagaagg---------aaggtcaggaatctgagtattgatgtcagtttttagagaagtacctgaagagt 2108  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgac 213  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||| |||||  ||||||||||||  |||||||  || ||    
T  2107 gagcttctggatgagctgcttctgaagctttagaagctggttctgatgaagtagcttctgaagcctgcttgtctttcaaagcttaagatagcagtttcac 2008  T
Q  214 tccttccttgacagtttcctcttctaactcagaagccaa 252  Q
    ||| |||| ||||||||||| ||| | ||||| ||||||    
T  2007 tccctcctggacagtttccttttcaacctcagcagccaa 1969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1002 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold1002
Description:

Target: scaffold1002; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 35 - 327
Target Start/End: Complemental strand, 2202 - 1910
Alignment:
Q  35 gatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaatgagcttctggatgagctgctt 134  Q
    |||||||||||||| |||| |   ||| |||||||||||||| ||||||| | |||||| || |||||||||||||| | | ||||||||||||||||||    
T  2202 gatgagggtgaagaaggtgaaataggagggtcaggaatctgagtattgatttcagctttagatgaagtacctgaagagttaccttctggatgagctgctt 2103  T
Q  135 ctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgactccttccttgacagtttcctc 234  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||    ||||| |||||||| |||||  | ||||| | || |||| | || |     
T  2102 ctggagctttagaagctggttcagatgaagtagctcctgaagcatgcttattcttcaatgcttgtgaaagcaatgttactccatgctggacaatctcttg 2003  T
Q  235 ttctaactcagaagccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttcatccctttgcttctc 327  Q
    ||||||||||| ||| || | |||||    ||  ||||| |||||| | || ||||| ||||||||||||||  | |||||| ||||||||||    
T  2002 ttctaactcagcagctaaagcagcaagctcagcagctttttcaggagcaagttcataccctgcagccttgagacgctcatccttttgcttctc 1910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1465 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold1465
Description:

Target: scaffold1465; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 178 - 327
Target Start/End: Original strand, 1 - 150
Alignment:
Q  178 atgctttcctttcaaagcttgtgatagcaacttgactccttccttgacagtttcctcttctaactcagaagccaaggtagcaataatagatgctttctca 277  Q
    |||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||| || | ||| ||   ||  || |||| |    
T  1 atgctttcctttcagagctagtgatagcaacttgactccttcctggacagtttcctcttctaactcagcagctaaagcagccatctcagcagccttctaa 100  T
Q  278 ggatccagctcatatcctgcagccttgagttgttcatccctttgcttctc 327  Q
    ||| | |||||||| |||||||||||||||||||||||||||||||||||    
T  101 ggagcaagctcataccctgcagccttgagttgttcatccctttgcttctc 150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2119 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold2119
Description:

Target: scaffold2119; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 14 - 206
Target Start/End: Complemental strand, 295 - 103
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat-ggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaa 112  Q
    ||||||||||  || |||||||| ||||||||||||| || |||| ||| ||| ||| |||||| ||| ||| | |||||| || ||| ||||||||||     
T  295 tcatctgattcggttgatgatgaagagggtgaagaggatg-agataggagggttaggtatctgagtatagatttcagctttggatgaaatacctgaagag 197  T
Q  113 tgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagca 206  Q
    |||||||||||||||||||||||||||||||| || || |||||||| ||||| ||||||||||| |||||   |||||| |||||||||||||    
T  196 tgagcttctggatgagctgcttctggagcttttgaagcaggttctgaagaagtggctcctgaagcttgcttatttttcaaggcttgtgatagca 103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 14 - 312
Target Start/End: Original strand, 24804 - 25093
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| |||||||||||||||||||||||| ||         |||||||||||||||| || |||| | || ||||   || ||||||||| | |    
T  24804 tcatctgattcagtggatgatgatgagggtgaagaagg---------aaggtcaggaatctgagtactgatgtcagtttttagtgatgtacctgaatagt 24894  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgac 213  Q
    |||||||| |||||||||||| || ||||||||| ||||||||||| ||||||||| |||||||||||||  ||||||||||||| || ||||  || ||    
T  24895 gagcttcttgatgagctgcttatgaagctttagaagctggttctgaagaagtagcttctgaagcatgcttgtctttcaaagcttgagaaagcagattcac 24994  T
Q  214 tccttccttgacagtttcctcttctaactcagaagccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttc 312  Q
      | || |  |||||||||| ||| | ||||| |||||| | |||||    ||  || ||||||||| | |||| ||| ||||||||||||||||||||    
T  24995 aacctcatgaacagtttccttttcaacctcagcagccaacgcagcaaactcagcagccttctcaggagctagcttataccctgcagccttgagttgttc 25093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 14752 - 14593
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtca-ggaatctgattattgatctt-agcttttgaggaagtacctgaaga 111  Q
    |||||||||| ||||||||||||||||||||||||         |||||||||| ||||||||| ||||||| || ||||| | | ||||||||||||||    
T  14752 tcatctgattcagtggatgatgatgagggtgaaga---------tggaaggtcaaggaatctgagtattgatatttagcttgtaaagaagtacctgaaga 14662  T
Q  112 at-gagcttctggatgagctgcttctggag-ctttagatgc-tggttctgatgaagtagctcctgaagc 177  Q
     | ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  14661 gttgagcttctggatgagctgcttctggagtctttagatgcttggttctgatgaagtagctcctgaagc 14593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 14 - 206
Target Start/End: Complemental strand, 51562 - 51379
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| |||||||||||||||||||||||||||| |||          |||||||||| ||| ||| | || ||| || ||| |||||||||| |    
T  51562 tcatctgattcagtggatgatgatgagggtgaagagggtagagt---------aggaatctgagtatagatatcagttttggatgaaatacctgaagagt 51472  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagca 206  Q
    ||||||||||||||||||||||||||||||| || || |||||||| ||||| ||||||||||| |||||    ||||| |||||||||||||    
T  51471 gagcttctggatgagctgcttctggagcttttgaagcaggttctgaagaagtggctcctgaagcttgcttattcttcaaggcttgtgatagca 51379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 4e-29; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 14 - 183
Target Start/End: Original strand, 17920360 - 17920520
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    ||||||||||  ||||||||||| ||||||||||||||| ||||         |||||||||| ||| ||| | || ||| || ||| |||||||||| |    
T  17920360 tcatctgattctgtggatgatgaagagggtgaagagggtagaga---------aggaatctgagtatagatgtcaggtttggatgaattacctgaagatt 17920450  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||||||| |||||||||||||||| || ||||||||||||||||| ||||||||||| |||||    
T  17920451 gagcttctggatgaactgcttctggagcttttgaagctggttctgatgaagttgctcctgaagcttgctt 17920520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 24026062 - 24025902
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    ||||||||||  ||||||||||| ||||||||||||||| ||||         |||||||||| ||| ||| | || ||| || ||| |||||||||| |    
T  24026062 tcatctgattctgtggatgatgaagagggtgaagagggtagaga---------aggaatctgagtatagatgtcaggtttggatgaattacctgaagatt 24025972  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||||||| |||||||||||||||| || ||||||||||||||||| ||||||||||| |||||    
T  24025971 gagcttctggatgaactgcttctggagcttttgaagctggttctgatgaagttgctcctgaagcttgctt 24025902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 206
Target Start/End: Complemental strand, 40468571 - 40468388
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| ||| |||||||||||||||||||||||| |||          |||||||||| ||| ||| | || ||| || ||| |||||||||| |    
T  40468571 tcatctgattcagttgatgatgatgagggtgaagagggttgagt---------aggaatctgagtatagatatcagttttggatgaaatacctgaagagt 40468481  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagca 206  Q
    ||||||||||||||||||||||||||||||| || || |||||||| ||||| ||||||||||| |||||    ||||| |||||||||||||    
T  40468480 gagcttctggatgagctgcttctggagcttttgaagcaggttctgaagaagtggctcctgaagcttgcttattcttcaaggcttgtgatagca 40468388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 14 - 183
Target Start/End: Original strand, 27190150 - 27190310
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| ||| |||||||||||||||||||||||| ||||         |||||||||| ||| ||| | || ||| || ||| |||||||||| |    
T  27190150 tcatctgattcagttgatgatgatgagggtgaagagggtagaga---------aggaatctgagtatagatatcaggtttggatgaattacctgaagatt 27190240  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||||||| ||||||||||||| || ||  | |||||||||||||||||||||||||| |||||    
T  27190241 gagcttctggatgaactgcttctggagcatttgaaacaggttctgatgaagtagctcctgaagcttgctt 27190310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 43 - 183
Target Start/End: Complemental strand, 19952953 - 19952813
Alignment:
Q  43 tgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaatgagcttctggatgagctgcttctggagct 142  Q
    ||||||||||| ||| || ||   |||||||||| ||| ||| | || ||| || ||| |||||||||| ||||||||||||||| ||||||||||||||    
T  19952953 tgaagagggtgaagagggtagagaaggaatctgagtatagatgtcaggtttggatgaattacctgaagattgagcttctggatgaactgcttctggagct 19952854  T
Q  143 ttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    || ||  |||||||||||||||||||||||||||| |||||    
T  19952853 tttgaaactggttctgatgaagtagctcctgaagcttgctt 19952813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 327
Target Start/End: Complemental strand, 15205218 - 15204944
Alignment:
Q  47 gagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaatgagcttctggatgagctgcttctggagctttag 146  Q
    ||||||| |||||||| ||||||||||| |  |||||| ||||||||      |||||||||||| |||||||||||  |||| |||||||||||||| |    
T  15205218 gagggtgaagatggaaagtcaggaatctaaacattgattttagcttt------agtacctgaagagtgagcttctggtcgagcagcttctggagcttttg 15205125  T
Q  147 atgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgactccttccttgacagtttcctcttctaactcaga 246  Q
    || |||||||||| |   | ||| ||||||||||||| ||||||| |||||||  || ||  ||  |||||||||| ||| |||||||||| |||||||     
T  15205124 atactggttctgaaggtattgcttctgaagcatgcttacctttcagagcttgttttaacagatttgctccttccttaacaatttcctcttcaaactcagc 15205025  T
Q  247 agccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttcatccctttgcttctc 327  Q
    ||| || |  |||| || ||  ||| | ||||||    || |||| ||||| |||||||| |||||||| |||||||||||    
T  15205024 agctaaagaggcaaaaacagcagctgtttcaggagtaggcacataccctgctgccttgagctgttcatctctttgcttctc 15204944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 183
Target Start/End: Original strand, 16258134 - 16258294
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||||||         ||||| ||| ||| | || ||| || ||| |||||||||| |    
T  16258134 tcatctgattctgtggatgatgaagagggtgaagagggtagagatggaa---------tctgagtatagatgtcaggtttggatgaattacctgaagatt 16258224  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||||||| |||||||||||||||| ||  | |||||||||||||| ||||||||||| |||||    
T  16258225 gagcttctggatgaactgcttctggagcttttgaaacaggttctgatgaagttgctcctgaagcttgctt 16258294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 24642652 - 24642733
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || ||||||||||||||||| ||||||||||| |||||    
T  24642652 tacctgaagactgagcttctggatgaactgcttctggagcttctgaagctggttctgatgaagttgctcctgaagcttgctt 24642733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 49509864 - 49509945
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || ||||||||||||||||| ||||||||||| |||||    
T  49509864 tacctgaagactgagcttctggatgaactgcttctggagcttctgaagctggttctgatgaagttgctcctgaagcttgctt 49509945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 55753764 - 55753683
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || ||||||||||||||||| ||||||||||| |||||    
T  55753764 tacctgaagactgagcttctggatgaactgcttctggagcttctgaagctggttctgatgaagttgctcctgaagcttgctt 55753683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 27658943 - 27659024
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| ||||||||||||| |  || ||||||||||||||||| ||||||||||| |||||    
T  27658943 tacctgaagactgagcttctggatgaactgcttctggagcatctgaagctggttctgatgaagttgctcctgaagcttgctt 27659024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 149 - 199
Target Start/End: Original strand, 3375336 - 3375386
Alignment:
Q  149 gctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgt 199  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3375336 gctggttctgaagaagtagctcctgaagcatgctttcctttcaaagcttgt 3375386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 149 - 327
Target Start/End: Original strand, 16307658 - 16307836
Alignment:
Q  149 gctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgactccttccttgacagtttcctcttctaactcagaag 248  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||   || |||     ||||||||||||||||||| ||| | | ||||| ||    
T  16307658 gctggttctgaagaagtagctcctgaagcattctttcctttcaaagcttgacttaacaaggctgctccttccttgacagtttcttctgcaatctcagcag 16307757  T
Q  249 ccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttcatccctttgcttctc 327  Q
    | || |  |||||    |  ||||| |||||| | |||||||| ||||| ||||||||||||||||| | |||||||||    
T  16307758 ctaacgaggcaatttctgcagctttttcaggagcaagctcataccctgctgccttgagttgttcatctcgttgcttctc 16307836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 149 - 324
Target Start/End: Original strand, 19573466 - 19573641
Alignment:
Q  149 gctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgactccttccttgacagtttcctcttctaactcagaag 248  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||   || |||     ||||||||||||||||||| ||| | | ||||| ||    
T  19573466 gctggttctgaagaagtagctcctgaagcattctttcctttcaaagcttgacttaacaaggctgctccttccttgacagtttcttctgcaatctcagcag 19573565  T
Q  249 ccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttcatccctttgctt 324  Q
    |||| | ||||||  | |  ||||||||| || | ||||| || ||||| ||||| || ||||||||  |||||||    
T  19573566 ccaatgaagcaatttttgcagctttctcaagagcaagctcttaccctgctgcctttagctgttcatctatttgctt 19573641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 10749122 - 10749041
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||| | ||  |||| ||||||||||| ||||||||||| |||||    
T  10749122 tacctgaggactgagcttctggatgaattgcttctggagctgttgaaactggatctgatgaagttgctcctgaagcttgctt 10749041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 10962891 - 10962810
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||| | ||  |||| ||||||||||| ||||||||||| |||||    
T  10962891 tacctgaggactgagcttctggatgaattgcttctggagctgttgaaactggatctgatgaagttgctcctgaagcttgctt 10962810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 36020621 - 36020702
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || |||||||||||||||  ||||||||||||| | ||  |||| ||||||||||| ||||||||||| |||||    
T  36020621 tacctgaggactgagcttctggatgaattgcttctggagctgttgaaactggatctgatgaagttgctcctgaagcttgctt 36020702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 27658864 - 27658912
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaa 62  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||||||    
T  27658864 tcatctgattctgtggatgatgaagagggtgaagagggtagagatggaa 27658912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 16307559 - 16307605
Alignment:
Q  47 gagggtggagatggaaggtcaggaatctgattattgatcttagcttt 93  Q
    ||||||| |||||||||||||||||||||| |||||||  |||||||    
T  16307559 gagggtgaagatggaaggtcaggaatctgagtattgattctagcttt 16307605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 10749201 - 10749157
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  10749201 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 10749157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 10962970 - 10962926
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  10962970 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 10962926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 36020542 - 36020586
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagat 58  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  36020542 tcatctgattctgtggatgatgaagagggtgaagagggtagagat 36020586  T

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Target: scaffold0016 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 324
Target Start/End: Original strand, 194344 - 194633
Alignment:
Q  38 gagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttt----tgaggaag--tacctgaagaatgagcttctggatgagctg 131  Q
    |||| ||| |||||||||||||||||||||||||||||| |||| ||  |||||||    |||| | |  |||||||||| ||| ||| ||  ||||| |    
T  194344 gaggatgatgagggtggagatggaaggtcaggaatctgaatattaattctagctttatattgagaaggaatacctgaagattgaccttttgattgagcag 194443  T
Q  132 cttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgactccttccttgacagtttc 231  Q
    ||||||||||||| |||| ||||||||| ||||   ||||||||| ||||||||||||||  | ||||  || ||     ||||||||||||||| ||||    
T  194444 cttctggagcttttgatgttggttctgaagaag---ctcctgaagtatgctttcctttcagggattgtcttaacagtgctactccttccttgacattttc 194540  T
Q  232 ctcttctaactcagaagccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttcatccctttgctt 324  Q
     |||||||| |||| ||  || |||||||| | ||  || ||||||||| | |||||||| || || ||||||||||||||||| ||||||||    
T  194541 ttcttctaattcagcagttaaagtagcaatcacagcagccttctcaggagcaagctcatacccagctgccttgagttgttcatctctttgctt 194633  T

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Target: scaffold0199 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 183
Target Start/End: Original strand, 20613 - 20773
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaat 113  Q
    |||||||||| ||| ||||||||||| |||||||||||| |||||||||         ||||| ||| |||   || ||| || ||| |||||||||| |    
T  20613 tcatctgattcagttgatgatgatgatggtgaagagggtagagatggaa---------tctgagtatagatgacaggtttggatgaattacctgaagatt 20703  T
Q  114 gagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||||||| |||||||||||||||| ||  | |||||||||||||||||||||||||| |||||    
T  20704 gagcttctggatgaactgcttctggagcttttgaaacaggttctgatgaagtagctcctgaagcttgctt 20773  T

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Target: scaffold0272 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0272
Description:

Target: scaffold0272; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 327
Target Start/End: Original strand, 21616 - 21878
Alignment:
Q  47 gagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaatgagcttctggatgagctgcttctggagctttag 146  Q
    ||||||| |||||||| ||||||||||||| ||||||| ||||||||||      ||||||| |||||||||| ||| |||||         |||||| |    
T  21616 gagggtgaagatggaaagtcaggaatctgaatattgattttagcttttg------tacctgatgaatgagcttttggttgagc---------agcttttg 21700  T
Q  147 atgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgactccttccttgacagtttcctcttctaactcaga 246  Q
    ||||||||||||| ||||   ||||||||| ||||||||||||||  || |||  ||  |      ||||||||||||||||||||||||| |  | ||     
T  21701 atgctggttctgaagaag---ctcctgaagtatgctttcctttcagggcatgtcttaatagggctgctccttccttgacagtttcctcttccagtttagc 21797  T
Q  247 agccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttcatccctttgcttctc 327  Q
    |||||||| |||||| | ||  |||||||||||| | |||||||| ||||| |||||||| |||||||| |||||||||||    
T  21798 agccaaggaagcaatgacagcagctttctcaggagcaagctcataccctgctgccttgagctgttcatctctttgcttctc 21878  T

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Target: scaffold0272; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 47 - 327
Target Start/End: Original strand, 16529 - 16791
Alignment:
Q  47 gagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaatgagcttctggatgagctgcttctggagctttag 146  Q
    ||||||| |||||||| ||||||||||||| ||||||| ||||||||||      ||||||| |||||||||| ||| |||||         |||||| |    
T  16529 gagggtgaagatggaaagtcaggaatctgaatattgattttagcttttg------tacctgatgaatgagcttttggttgagc---------agcttttg 16613  T
Q  147 atgctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgactccttccttgacagtttcctcttctaactcaga 246  Q
    ||||||||||||| ||||   ||||||||| ||||||||||||||  || |||  ||  |      ||||||||||||||||||||||||| |  | ||     
T  16614 atgctggttctgaagaag---ctcctgaagtatgctttcctttcagggcatgtcttaatagggctgctccttccttgacagtttcctcttccagtttagc 16710  T
Q  247 agccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttcatccctttgcttctc 327  Q
    |||||||| |||||| | ||  |||||||||||| | |||||||| | ||| |||||||| |||||||| |||||||||||    
T  16711 agccaaggaagcaatgacagcagctttctcaggagcaagctcataccatgctgccttgagctgttcatctctttgcttctc 16791  T

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Target: scaffold0105 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 45515 - 45434
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || ||||||||||||||||| ||||||||||| |||||    
T  45515 tacctgaagactgagcttctggatgaactgcttctggagcttctgaggctggttctgatgaagttgctcctgaagcttgctt 45434  T

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Target: scaffold0454 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 102 - 184
Target Start/End: Original strand, 3605 - 3687
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgcttt 184  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || | ||||||||||||||| ||||||||||| ||||||    
T  3605 tacctgaagactgagcttctggatgaactgcttctggagcttctgaagatggttctgatgaagttgctcctgaagcttgcttt 3687  T

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Target: scaffold0085 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 252
Target Start/End: Original strand, 56247 - 56350
Alignment:
Q  149 gctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgactccttccttgacagtttcctcttctaactcagaag 248  Q
    ||||||||||||||||||||| ||||||| |||||  ||||||||||||| |||||||  || ||||||||||  |||||||||| ||| | ||||| ||    
T  56247 gctggttctgatgaagtagcttctgaagcctgcttgtctttcaaagcttgagatagcagtttcactccttcctgaacagtttccttttcaacctcagcag 56346  T
Q  249 ccaa 252  Q
    ||||    
T  56347 ccaa 56350  T

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Target: scaffold0085; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 47 - 137
Target Start/End: Original strand, 56166 - 56256
Alignment:
Q  47 gagggtggagatggaaggtcaggaatctgattattgatcttagcttttgaggaagtacctgaagaatgagcttctggatgagctgcttctg 137  Q
    ||||||| ||| |||||||||||||||||| ||||||| | || ||||   |||||||||||||| ||||||||||||||||||| |||||    
T  56166 gagggtgaagaaggaaggtcaggaatctgagtattgatgtcagtttttagagaagtacctgaagagtgagcttctggatgagctggttctg 56256  T

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Target: scaffold1362 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold1362
Description:

Target: scaffold1362; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 149 - 327
Target Start/End: Complemental strand, 1940 - 1762
Alignment:
Q  149 gctggttctgatgaagtagctcctgaagcatgctttcctttcaaagcttgtgatagcaacttgactccttccttgacagtttcctcttctaactcagaag 248  Q
    ||||||||||| ||||||||||||||||||||||| |||||||  ||||||  || ||    | |||||||||| | |||||| ||| | | ||||| ||    
T  1940 gctggttctgaagaagtagctcctgaagcatgcttacctttcagtgcttgtcttaacagagcggctccttccttaaaagtttcttctgcaatctcagcag 1841  T
Q  249 ccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttcatccctttgcttctc 327  Q
    |||| | |||||||   |  |||||||||||| | |||||||| ||||| |||||||| | |||||| |||||||||||    
T  1840 ccaacgaagcaatatctgcagctttctcaggagcaagctcataccctgctgccttgagctattcatctctttgcttctc 1762  T

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Target: scaffold0201 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 913 - 1026
Alignment:
Q  213 ctccttccttgacagtttcctcttctaactcagaagccaaggtagcaataatagatgctttctcaggatccagctcatatcctgcagccttgagttgttc 312  Q
    |||||||||||||||| || ||||| | ||||| | |||| | |||||| | || ||||||||||| ||||||||||||||| ||||| || || |||||    
T  913 ctccttccttgacagtgtcttcttcaatctcagcaaccaaagaagcaattacagctgctttctcagcatccagctcatatccagcagctttaagctgttc 1012  T
Q  313 atccctttgcttct 326  Q
    ||| || |||||||    
T  1013 atctctctgcttct 1026  T

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Target: scaffold0747 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 4582 - 4712
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaagagggtggagatggaaggtcaggaatctgattatt-gatcttagcttttgaggaagtacctgaagaa 112  Q
    ||||||||||  |||||||||||||| |||||||| ||| |||  ||||||  |||||||||| |||| |||   |||||| || ||| |||||||||||    
T  4582 tcatctgattctgtggatgatgatgaaggtgaagatggtagagtaggaagggtaggaatctgagtattagatgg-agctttagatgaattacctgaagaa 4680  T
Q  113 tgagcttctggatgagctgcttctggagcttt 144  Q
    |||| ||||| ||||| ||||| |||||||||    
T  4681 tgaggttctgaatgaggtgcttttggagcttt 4712  T

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Target: scaffold0485 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 70 - 36
Alignment:
Q  14 tcatctgatttagtggatgatgatgagggtgaaga 48  Q
    |||||||||| ||||||||||||||||||||||||    
T  70 tcatctgattcagtggatgatgatgagggtgaaga 36  T

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Target: scaffold1216 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1216
Description:

Target: scaffold1216; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 1453 - 1534
Alignment:
Q  102 tacctgaagaatgagcttctggatgagctgcttctggagctttagatgctggttctgatgaagtagctcctgaagcatgctt 183  Q
    ||||||| || | ||||||||||||||||||||||||| | || || || ||| |||  |||||||||||||| || |||||    
T  1453 tacctgatgagttagcttctggatgagctgcttctggaacctttgaagcaggtcctgcagaagtagctcctgaggcttgctt 1534  T

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