View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10643_low_6 (Length: 253)
Name: NF10643_low_6
Description: NF10643
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10643_low_6 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 11 - 253
Target Start/End: Original strand, 37795025 - 37795267
Alignment:
| Q |
11 |
aagcaaaggaacacaacccaaaacggacatggggcagcaatatgaacatttaaaacttgttgtccatcataataagtcattagaagaaagtagtgatata |
110 |
Q |
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| T |
37795025 |
aagcaatggaacacaacccaacacggatatggggcagcaatatgaacatttaaaacttgttgtcaatcataataagtcattagaagaaagtagtgatata |
37795124 |
T |
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| Q |
111 |
tataatttacttataattaataatttgatttacaaaaacaattgtaaatcataaacatatgattagaacaattatcaatgtggtgaggatagacaagatt |
210 |
Q |
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| T |
37795125 |
tataatttacttataattaataatttgatttacaaaaacaattgtaaatcatatacatatgattagaacaattatcaatgtggtgaggatagacaagatt |
37795224 |
T |
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| Q |
211 |
aaaaaatttctagtaatatattaccttcttgaaagagaacaaa |
253 |
Q |
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| T |
37795225 |
aaaaaaattctagtaatatattaccttcttgaaagagaacaaa |
37795267 |
T |
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