View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10644_2 (Length: 491)
Name: NF10644_2
Description: NF10644
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10644_2 |
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Alignment Details
Target: chr7 (Bit Score: 396; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 396; E-Value: 0
Query Start/End: Original strand, 11 - 476
Target Start/End: Complemental strand, 35327358 - 35326893
Alignment:
| Q |
11 |
cagcatagagcaaagaggctgcatcataaataaaaag-ataagtggttatgcaaataaatttgtttgaaggcttttgtggttaatgacttgtttgaacca |
109 |
Q |
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| T |
35327358 |
cagcacagagcaaagaggctgcatcataaataaaaaggataagtggttatgcaaataaatttgtttgaaggcttttgtggattat------tttgaacca |
35327265 |
T |
|
| Q |
110 |
agtcattaactaaacagaagcttaatctctgtgcctttcccttcagaagcttaccatccctcaatgaagcccctatctcctttcttctttgtactaacga |
209 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
35327264 |
agtcattaactaaacagaagcttaatctctgtgcctttcccttcagaagcttaccatccctcaatgaagcccctatctcctttcttctttgtactaatga |
35327165 |
T |
|
| Q |
210 |
acagctttctttttgtggggggatcctggtcagttgggtatcctgaaatcatgaaaaaatgaaaggtaagttccttattactgcatgc----atgcatgc |
305 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
35327164 |
acagctttctttttgtggggggatcctggtcagttgggtatcctgaaatcatgaaaaaatgaaaggtaagttccttattactgcatgcatgtatgcatgc |
35327065 |
T |
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| Q |
306 |
atgtttgtttgagatagagagagatgcatataagggaacctggtggaggctggtttctctgaatctctggtttctgcattttgaagaatg-aaaaagtga |
404 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
35327064 |
atgtttgtttgagatagagagagatgcatataagggaacctggtggaggctggtttctctgaatctctggtttctgcattttgaagaatgaaaaaagtga |
35326965 |
T |
|
| Q |
405 |
gttgtgtaaaggtggctggtttgcacttgtatcaatcaaggtatgtgtatgtgctgaattaaattgctatat |
476 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
35326964 |
gttgtgtaaaggtggctggtttgcacttgtatcaatcaaggtatgtgtatgtgctgaattaaattggtatat |
35326893 |
T |
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