View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10644_5 (Length: 412)
Name: NF10644_5
Description: NF10644
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10644_5 |
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Alignment Details
Target: chr4 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 22 - 391
Target Start/End: Complemental strand, 26606204 - 26605837
Alignment:
| Q |
22 |
ataatgacccccgccattacggggtctaaggcttcggcagcctatgatgcccctatcccaaagttgagattttcttttttgaccgatacctagacctact |
121 |
Q |
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| T |
26606204 |
ataatgacccccgccatcacggggtctaaggcttcggcagcctatgatgcccctatcccaaagttgagattttcttttttgaccgatacctagacctact |
26606105 |
T |
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| Q |
122 |
cgaagtttttagccaccaatggttgaaccaaaacatttatcggtgataaatttttcgacctcctttgtgtgctatgatgaaacgcgtttggtaataacca |
221 |
Q |
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||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||| ||||| |||| |||||||||| ||||||||||||||| |
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| T |
26606104 |
cgaagtttttagccaccaatggttgaaccaaaacatttacccgtcataaatttttcgacctcgtttgtttgctctgatgaaacgagtttggtaataacca |
26606005 |
T |
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| Q |
222 |
acatttttgtttttataatatcttgataattgtttttctgcttcattttatatgttcttactaaagtgggtttgtgataaatttatggacaaattaaagg |
321 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26606004 |
acatttttgtttttataatatcttgataattgtttttctgcttcattttatatgttcttactaaagtgggtttgtgataaatttatggacaaattaaagg |
26605905 |
T |
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| Q |
322 |
agactagtcggacatactttaacctatgagtgnnnnnnnnnctagaaccctaagcgaacaacgtgatgat |
391 |
Q |
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|||||||| |||||||||| |||||||||||| ||||||||||||||||||||| ||||||| |
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| T |
26605904 |
agactagttggacatacttcaacctatgagtg--tttttttctagaaccctaagcgaacaacatgatgat |
26605837 |
T |
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