View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10645_low_4 (Length: 308)
Name: NF10645_low_4
Description: NF10645
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10645_low_4 |
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Alignment Details
Target: chr6 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 9 - 292
Target Start/End: Original strand, 5027703 - 5027986
Alignment:
| Q |
9 |
agcagagagataagaatgagagaacaaaaaatagcataaattatggatgttgggtttacacataacaacaatgaagagaatatcttctgcaaaagcagaa |
108 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5027703 |
agcaaagagataagaatgagagaacaaaaaatagcataaattatggatgttgggtttacacataacaacaatgaagagaatatcttctgcaaaagcagaa |
5027802 |
T |
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| Q |
109 |
agaacaaaaagaagtagaaatgaagcaattccaaagtgatatatgttaagggcagtaactacagagagatttgatagacccaagaagagatgtttttata |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5027803 |
agaacaaaaagaagtagaaatgaagcaattccaaagtgatatatgttaagggcagtaactacagagagatttgatagacccaagaagagatgtttttata |
5027902 |
T |
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| Q |
209 |
ttatctgttgttgtatagcaaagtttgaggtattgaaggctaaagtgattgtgagaggaattgtagtgatatttattatatatc |
292 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
5027903 |
ttatctgttgttgtataccaaagtttgaggtattgaaggctaaagtgattgtgagaggaattgtggtgatatttattatatatc |
5027986 |
T |
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