View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10646_low_6 (Length: 338)
Name: NF10646_low_6
Description: NF10646
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10646_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 1 - 332
Target Start/End: Original strand, 7905921 - 7906252
Alignment:
| Q |
1 |
agcatgtggttgagatgttgatatggaaggatctggtgtggcagggtcagtgggaaatatggggggattatcgaaataaatttgtggagtattgtgaggt |
100 |
Q |
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| T |
7905921 |
agcatgtggttgagatgttgatatggaaggatctggtgtggcaggttcagtggtaaatatgggagtattatcgaaataaatttgtggagtattgtgaggt |
7906020 |
T |
|
| Q |
101 |
gtgttatgtggattcgtgtgttgatgatgaaaggggaataagttgggagacagatatcaaattagttgcaaactgtggaataaacaacactctgtcaagc |
200 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
7906021 |
gtgttatgtggatttgtgtgttgatgatgaaaggggaataagttgggagacagatatctaattagttgcaaactgtggaataaacaacactctgtcaagc |
7906120 |
T |
|
| Q |
201 |
gttaagtaggtgtgtgagtcatactgtgccggaaaagtgtgctacaaccgtatgtccattaggtaaattaatattcataggtgtgatccgtgcatgagaa |
300 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7906121 |
gttaagtaggtgtgtgagtcatactgtgccagaaaagtgtgctacaaccgtatgtccattaggtaaattaatattcataggtgtgatccgtgcatgagaa |
7906220 |
T |
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| Q |
301 |
gtgtacaaatccaaattacaacatatgtgagt |
332 |
Q |
| |
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|||||||||||||||||||||||||||||||| |
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| T |
7906221 |
gtgtacaaatccaaattacaacatatgtgagt |
7906252 |
T |
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