View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10647_1 (Length: 429)
Name: NF10647_1
Description: NF10647
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10647_1 |
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Alignment Details
Target: chr5 (Bit Score: 381; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 381; E-Value: 0
Query Start/End: Original strand, 1 - 409
Target Start/End: Complemental strand, 34768453 - 34768045
Alignment:
| Q |
1 |
tcaagtgctcttgtctcatcatctatagcattttttagtggaaaacaatgtccatatctttaacttggactcaatatatattctcgagtaagctaagtat |
100 |
Q |
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| T |
34768453 |
tcaagtgctcttgtctcatcatctatagcattttttagtgggaaacaatgtccatatctttaacttggactcaatatatattctcgagtaagctaagtat |
34768354 |
T |
|
| Q |
101 |
tcaacatatattgaaattttcactgagtcaataaatatagtaaaactctgatattgcgtaaaaaagttatataaagaagacaaatttagaaataaagaaa |
200 |
Q |
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| T |
34768353 |
tcaacatatattgaaattttcactgagtcaataaatatagtaaaactttgatattgcgtaaaaaagttgtataaagaagacaaatttagaaataaagaaa |
34768254 |
T |
|
| Q |
201 |
catgtcataaaactgggctaggttaaatatgagaataattacaaataaataaattattttaaataaattcctgtagtcaataactaaatacgattaaagt |
300 |
Q |
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| T |
34768253 |
catgtcataaaactgggctaggttaaatatgagaataataacaaataaataaattattttaaataaattcctgtagtcaataactaaatacgattaaagt |
34768154 |
T |
|
| Q |
301 |
tggtttggattgggtttcatctttctctcctttgatactccaatgttgcatcattctacattgttgaatgtgtcaatttctacaaaacataaaataatga |
400 |
Q |
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| T |
34768153 |
tggtttggactgggtttcatctttctctcctttgataccccaatgttgcatcattccacattgttgaatgtgtcaatttctacaaaacataaaataatga |
34768054 |
T |
|
| Q |
401 |
acacaacca |
409 |
Q |
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| T |
34768053 |
acacaacca |
34768045 |
T |
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