View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10647_low_1 (Length: 334)
Name: NF10647_low_1
Description: NF10647
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10647_low_1 |
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Alignment Details
Target: chr2 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 22 - 250
Target Start/End: Original strand, 34378162 - 34378390
Alignment:
| Q |
22 |
ttgctagctaggtcttcaatttttgttagaatggccaatattttcatgtcatgacaaaaaatgaaagttgtatactttggcacgatgtataacaattctg |
121 |
Q |
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| T |
34378162 |
ttgctagctaggtcttcaatttttgttagaatggccaatattttcatgtcatgacaaaaaatgaaagttgtatactttggcacgatgtataacaattctg |
34378261 |
T |
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| Q |
122 |
ttattcttacatcataagacaaatcaattatgtataagaagatcccctcgtaaaaagaaacatcagaatacaattactaccttcatgtgtaagtaaaata |
221 |
Q |
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| T |
34378262 |
ttattcttacatcataagacaaatcaattatgtataagaagatcccctcgtaaaaagaaacatcaaaatacaattactaccttcatgtgtaagtaaaata |
34378361 |
T |
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| Q |
222 |
ttaacaaacaaactttttgtaccgaagaa |
250 |
Q |
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| T |
34378362 |
ttaacaaacaaactttttgtaccgaagaa |
34378390 |
T |
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