View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1064_high_11 (Length: 251)
Name: NF1064_high_11
Description: NF1064
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1064_high_11 |
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| [»] chr7 (2 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 202; Significance: 1e-110; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 30 - 251
Target Start/End: Original strand, 2330058 - 2330279
Alignment:
| Q |
30 |
ggatatatagctccaggtaaatttttcattgttctttattatcttattattgcatttttccattaaatatgatacataacatgagcattcatcatctacc |
129 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
2330058 |
ggatatatagctccaggtaaatttttcattgttctttattatcttattattgcatttttccatcaaatatgatacataacatgagcattcatcatctacc |
2330157 |
T |
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| Q |
130 |
caaataacatacatgttcattagtatttactacgaatttctgaaaactgtactactaactttgtcccttaatataagtctcattttaaattattaattac |
229 |
Q |
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|||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
2330158 |
caaataacatacatgttcatcagtttttactacgaatttctgaaaactgtactactaactttgtcccttaatataaatctcattttaaattattaattaa |
2330257 |
T |
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| Q |
230 |
atatattcacttattttagagt |
251 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
2330258 |
atatattcacttattttagagt |
2330279 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 30 - 251
Target Start/End: Original strand, 2337957 - 2338177
Alignment:
| Q |
30 |
ggatatatagctccaggtaaatttttcattgttctttattatcttattattgcatttttccattaaatatgatacataacatgagcattcatcatctacc |
129 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2337957 |
ggatatatagctccaggtaaatttttcattgttctttattatcttattattgaatttttccattaaatatgatacataacatgagcattcatcatctacc |
2338056 |
T |
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| Q |
130 |
caaataacatacatgttcattagtatttactacgaatttctgaaaactgtactactaactttgtcccttaatataagtctcattttaaattattaattac |
229 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
2338057 |
caaataacatacatgttcattagt-tttactacgaatttctgaaaactgtactactaactttgtcccttaatataagtctcattttaaattactaattaa |
2338155 |
T |
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| Q |
230 |
atatattcacttattttagagt |
251 |
Q |
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|||||||||||||||||||||| |
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| T |
2338156 |
atatattcacttattttagagt |
2338177 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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