View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1064_low_12 (Length: 266)
Name: NF1064_low_12
Description: NF1064
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1064_low_12 |
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Alignment Details
Target: chr4 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 29582826 - 29583056
Alignment:
| Q |
1 |
acacagattttaagatcaattactatttgtggttgtaaagcactatctgtataatagatattttatgatcaaatacaatttgtggttgtcatcaagagaa |
100 |
Q |
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| T |
29582826 |
acacagattttaagatcaattactatttgtggttgtaaaacactatctgca--atagatattttatgatcaaatacaatttgtggttgtcatcaagagaa |
29582923 |
T |
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| Q |
101 |
ccatataagtaggtcaacccaactattaagatcaaatacttatttatctatataaataaacaaactatatcaacactactctcccataactaggacgctc |
200 |
Q |
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| T |
29582924 |
ccatataagtaggtcaacccaactattaagatcaaatacttatttatctat----ataaacaaactatatcaacactactctcccataactaggacgctc |
29583019 |
T |
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| Q |
201 |
caagcactatatcaaaatggaagaatcaactaggtgg |
237 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
29583020 |
caagcactatatcaaaatggaagaatcaactaggtgg |
29583056 |
T |
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