View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1064_low_2 (Length: 500)

Name: NF1064_low_2
Description: NF1064
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1064_low_2
NF1064_low_2
[»] chr4 (9 HSPs)
chr4 (97-480)||(32823368-32823751)
chr4 (96-492)||(13769833-13770229)
chr4 (96-492)||(24783168-24783562)
chr4 (96-301)||(19032628-19032833)
chr4 (296-480)||(31940211-31940395)
chr4 (96-250)||(31940059-31940213)
chr4 (254-346)||(19032833-19032925)
chr4 (113-187)||(30226322-30226396)
chr4 (281-330)||(19032937-19032986)
[»] chr7 (7 HSPs)
chr7 (100-492)||(304196-304588)
chr7 (100-492)||(2829529-2829921)
chr7 (96-270)||(45809538-45809721)
chr7 (350-489)||(7527652-7527794)
chr7 (113-187)||(41532752-41532826)
chr7 (113-187)||(5480879-5480953)
chr7 (150-208)||(33335626-33335684)
[»] chr5 (4 HSPs)
chr5 (96-490)||(17172194-17172586)
chr5 (96-376)||(8403615-8403895)
chr5 (113-187)||(12105996-12106070)
chr5 (113-187)||(21361245-21361319)
[»] chr6 (4 HSPs)
chr6 (96-492)||(7639783-7640177)
chr6 (96-427)||(30383838-30384168)
chr6 (96-327)||(582904-583132)
chr6 (96-327)||(3886382-3886613)
[»] chr2 (10 HSPs)
chr2 (96-492)||(25280179-25280568)
chr2 (96-327)||(1592676-1592904)
chr2 (96-327)||(36314159-36314387)
chr2 (96-291)||(5380980-5381175)
chr2 (96-207)||(19590539-19590650)
chr2 (101-187)||(41055527-41055613)
chr2 (307-403)||(10413029-10413125)
chr2 (113-187)||(21613028-21613102)
chr2 (113-162)||(12563591-12563640)
chr2 (113-187)||(21278949-21279023)
[»] chr8 (4 HSPs)
chr8 (96-327)||(18606260-18606491)
chr8 (96-276)||(2812313-2812493)
chr8 (122-270)||(26858456-26858604)
chr8 (115-187)||(35816398-35816470)
[»] chr3 (2 HSPs)
chr3 (96-305)||(35734051-35734258)
chr3 (113-187)||(52724945-52725019)
[»] chr1 (1 HSPs)
chr1 (96-270)||(7493726-7493904)


Alignment Details
Target: chr4 (Bit Score: 252; Significance: 1e-140; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 97 - 480
Target Start/End: Original strand, 32823368 - 32823751
Alignment:
Q  97 aattgaactcagcggcccttcaaagactcaaattcatccataattgcatctgagctaaactgacttgcaatctctttttcaatgtaaataaccaagttat 196  Q
    |||| ||||| |||||| || ||||||| |||||||||||||||||||| |||| ||| |||||||||||| |||||||||||||||||||||||| |||    
T  32823368 aattaaactcggcggccttttaaagactaaaattcatccataattgcatatgaggtaatctgacttgcaatgtctttttcaatgtaaataaccaagctat 32823467  T
Q  197 ttgaaagaaaatcatcactcattttgtttctttgctttgtcttgatatttttcattgatgagaaagctctctatgttgtcactgtggagactgggagtgt 296  Q
    |||||||||||||||  ||||||||||||||||  |||||||||| |||||||||||||||||||||||||| |||||||  ||||||||| | ||||||    
T  32823468 ttgaaagaaaatcattgctcattttgtttctttattttgtcttgagatttttcattgatgagaaagctctctctgttgtcgttgtggagacggtgagtgt 32823567  T
Q  297 caaaacaaggcgaatcaatctatcaattaaatgataacgccttgacttccctgattctactaattttttgcgcaactcagataatgttgttatattttga 396  Q
     | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| | | |||||||||||||| |    
T  32823568 tagaacaaggcgaatcaatctatcaattaaatgataacgccttgacttccctgattctactaattttttgcacaattcaaagagtgttgttatattttaa 32823667  T
Q  397 agagactgatgtatatcagcaatgtaatgacttaattgcaacctcaaatgaattctttcttgcttagagaaatcattagaatag 480  Q
    | ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||    
T  32823668 aaagactgaggtatatcagcaatgtaatgacttaattgcaacttcaaatgaattctttcttgctcagtgaaatcattagaatag 32823751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 96 - 492
Target Start/End: Complemental strand, 13770229 - 13769833
Alignment:
Q  96 aaattgaactcagcggcccttcaaagactcaaattcatccataattgcatctgagctaaactgacttgcaatctctttttcaatgtaaataaccaagtta 195  Q
    |||||||| ||  ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |  ||||||||||| ||||||||| |     
T  13770229 aaattgaattcgtcggcccttcaaagactcaaattcatccataattgcatttgagctaaattgacttgcaatgttcttttcaatgtagataaccaagctg 13770130  T
Q  196 tttgaaagaaaatcatcactcattttgtttctttgctttgtcttgatatttttcattgatgagaaagctctctatgttgtcactgtggagactgggagtg 295  Q
    |||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||| ||  |||| |||||||||||||    
T  13770129 tttgaaagaaaagcatcactcattttgtttctttgttttgtcttgagatttttcattgatgagaaagctctctctgtcgttgctgtcgagactgggagtg 13770030  T
Q  296 tcaaaacaaggcgaatcaatctatcaattaaatgataacgccttgacttccctgattctactaattttttgcgcaactcagataatgttgttatattttg 395  Q
    |||||||||| |||||||||||||||||||||||||| ||| |||| ||| | ||||||||||||||||||| ||||||||| | |||||||||||||||    
T  13770029 tcaaaacaagacgaatcaatctatcaattaaatgatagcgctttgatttctcagattctactaattttttgcacaactcagagagtgttgttatattttg 13769930  T
Q  396 aagagactgatgtatatcagcaatgtaatgacttaattgcaacctcaaatgaattctttcttgcttagagaaatcattagaatagcaagtctctgct 492  Q
    || ||||||| |||||||| |||||||||||||||||||||| || | ||||| ||||||||||| || |||||||||||||||| |||||||||||    
T  13769929 aaaagactgaggtatatcaacaatgtaatgacttaattgcaatctaagatgaagtctttcttgctcagtgaaatcattagaatagtaagtctctgct 13769833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 96 - 492
Target Start/End: Original strand, 24783168 - 24783562
Alignment:
Q  96 aaattgaactcagcggcccttcaaagactcaaattcatccataattgcatctgagctaaactgacttgcaatctctttttcaatgtaaataaccaagtta 195  Q
    |||| |||||| ||| || |||||||||||||||||||||||||||||||  |||||||||||||||||||| || |||| ||||| |||||||||| ||    
T  24783168 aaatcgaactcggcgaccattcaaagactcaaattcatccataattgcat--gagctaaactgacttgcaatgtcctttttaatgtgaataaccaagata 24783265  T
Q  196 tttgaaagaaaatcatcactcattttgtttctttgctttgtcttgatatttttcattgatgagaaagctctctatgttgtcactgtggagactgggagtg 295  Q
    |||| |||||||| ||||||||||||| ||||||| ||| |||||| ||||||||||| |||||||||||||| ||||||   |||||||||||   | |    
T  24783266 tttgcaagaaaataatcactcattttgattctttgttttatcttgagatttttcattgttgagaaagctctctttgttgttgttgtggagactgcatggg 24783365  T
Q  296 tcaaaacaaggcgaatcaatctatcaattaaatgataacgccttgacttccctgattctactaattttttgcgcaactcagataatgttgttatattttg 395  Q
    |||||||||| ||||||||||| | |||||||||||| ||  ||||||||||  ||||||||||| |||| | ||||||||| |||||||||||||||||    
T  24783366 tcaaaacaagacgaatcaatctctaaattaaatgatagcgttttgacttccccaattctactaatctttttcacaactcagaaaatgttgttatattttg 24783465  T
Q  396 aagagactgatgtatatcagcaatgtaatgacttaattgcaacctcaaatgaattctttcttgcttagagaaatcattagaatagcaagtctctgct 492  Q
    || |||||||   |||||||||||| |||| |||||||||||||||  |||||||  |||||| |||| |||| ||| | ||||| |||||||||||    
T  24783466 aaaagactgacacatatcagcaatgcaatgtcttaattgcaacctcggatgaatttgttcttgattagtgaaaccataaaaatagaaagtctctgct 24783562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 96 - 301
Target Start/End: Original strand, 19032628 - 19032833
Alignment:
Q  96 aaattgaactcagcggcccttcaaagactcaaattcatccataattgcatctgagctaaactgacttgcaatctctttttcaatgtaaataaccaagtta 195  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| ||    
T  19032628 aaattgaactcagcgacccttcaaacactcaaattcatccataattgcatctgagctaaactgacttgcaatttccttttcaatgtaaataatcaagcta 19032727  T
Q  196 tttgaaagaaaatcatcactcattttgtttctttgctttgtcttgatatttttcattgatgagaaagctctctatgttgtcactgtggagactgggagtg 295  Q
    |||| ||||||||||||  |||||||||||||||| |||||||||| |||||||||||||||||||| |||||  |||||  ||||||||| ||||||||    
T  19032728 tttgcaagaaaatcatctatcattttgtttctttgttttgtcttgagatttttcattgatgagaaagttctcttcgttgttgctgtggagattgggagtg 19032827  T
Q  296 tcaaaa 301  Q
    | ||||    
T  19032828 ttaaaa 19032833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 296 - 480
Target Start/End: Original strand, 31940211 - 31940395
Alignment:
Q  296 tcaaaacaaggcgaatcaatctatcaattaaatgataacgccttgacttccctgattctactaattttttgcgcaactcagataatgttgttatattttg 395  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  || ||||| | |||||||||||||||    
T  31940211 tcaaaacaagacgaatcaatctatcaattaaatgataacgctttgacttccctgattctactaattttttgcaaaattcagagagtgttgttatattttg 31940310  T
Q  396 aagagactgatgtatatcagcaatgtaatgacttaattgcaacctcaaatgaattctttcttgcttagagaaatcattagaatag 480  Q
    || ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| | |  ||||||||||||||||    
T  31940311 aaaagactaaggtatatcagcaatgtaatgacttaattgcaacctcaaatgaattctttcttgttcaatgaaatcattagaatag 31940395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 96 - 250
Target Start/End: Original strand, 31940059 - 31940213
Alignment:
Q  96 aaattgaactcagcggcccttcaaagactcaaattcatccataattgcatctgagctaaactgacttgcaatctctttttcaatgtaaataaccaagtta 195  Q
    |||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||  ||    
T  31940059 aaattgaactcgacgacccttcaaagactcaaattcatccataattgcatctgagctaaactgacttacaatgtctttttcaatgtaaataaccaaacta 31940158  T
Q  196 tttgaaagaaaatcatcactcattttgtttctttgctttgtcttgatatttttca 250  Q
    |||||||||||||||||||||||||||||| |||| |||||||||| ||||||||    
T  31940159 tttgaaagaaaatcatcactcattttgtttatttgttttgtcttgagatttttca 31940213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 254 - 346
Target Start/End: Original strand, 19032833 - 19032925
Alignment:
Q  254 atgagaaagctctctatgttgtcactgtggagactgggagtgtcaaaacaaggcgaatcaatctatcaattaaatgataacgccttgacttcc 346  Q
    ||||||||| |||||  |||||  ||||||||| || |||||| ||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  19032833 atgagaaagttctcttcgttgttgctgtggagattgagagtgttaaaacaagatgaatcaatctatcaattaaatgataacgcattgacttcc 19032925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 113 - 187
Target Start/End: Original strand, 30226322 - 30226396
Alignment:
Q  113 ccttcaaagactcaaattcatccataattgcatctgagctaaactgacttgcaatctctttttcaatgtaaataa 187  Q
    |||||||||||||||||||||| |||| ||| | |||  | || ||||||||||| |||||||||||||||||||    
T  30226322 ccttcaaagactcaaattcatctataactgcttatgaatttaagtgacttgcaatgtctttttcaatgtaaataa 30226396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 19032937 - 19032986
Alignment:
Q  281 tggagactgggagtgtcaaaacaaggcgaatcaatctatcaattaaatga 330  Q
    |||||| ||||||||| |||||||| ||||||||||||||||||||||||    
T  19032937 tggagattgggagtgttaaaacaagacgaatcaatctatcaattaaatga 19032986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 100 - 492
Target Start/End: Original strand, 304196 - 304588
Alignment:
Q  100 tgaactcagcggcccttcaaagactcaaattcatccataattgcatctgagctaaactgacttgcaatctctttttcaatgtaaataaccaagttatttg 199  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| || |||||||| || ||||||||| | ||||    
T  304196 tgaactcgtcggcccttcaaagactcaaattcatccataattgcatctgagctaaattgacttacaatgtccttttcaatatagataaccaagctgtttg 304295  T
Q  200 aaagaaaatcatcactcattttgtttctttgctttgtcttgatatttttcattgatgagaaagctctctatgttgtcactgtggagactgggagtgtcaa 299  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| | | ||  |||| |||||||||||||||||    
T  304296 aaagaaaatcatcactcattttgtttctttgttttgtcttgagatttttcattgatgagaaagctctctctatcgttgctgttgagactgggagtgtcaa 304395  T
Q  300 aacaaggcgaatcaatctatcaattaaatgataacgccttgacttccctgattctactaattttttgcgcaactcagataatgttgttatattttgaaga 399  Q
    |||||| ||||||||||||||||||||||| || ||| |||| |||   ||||||||||||||||||| ||||||||| | ||||||||||||||||| |    
T  304396 aacaagacgaatcaatctatcaattaaatgttagcgctttgatttctaagattctactaattttttgcacaactcagagagtgttgttatattttgaaaa 304495  T
Q  400 gactgatgtatatcagcaatgtaatgacttaattgcaacctcaaatgaattctttcttgcttagagaaatcattagaatagcaagtctctgct 492  Q
    |||||| |||||||| ||||||||||||||||||||||| | | ||||| ||||||||||| || |||||||||||||||| |||||||||||    
T  304496 gactgaggtatatcaacaatgtaatgacttaattgcaacataagatgaagtctttcttgctcagtgaaatcattagaatagtaagtctctgct 304588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 100 - 492
Target Start/End: Complemental strand, 2829921 - 2829529
Alignment:
Q  100 tgaactcagcggcccttcaaagactcaaattcatccataattgcatctgagctaaactgacttgcaatctctttttcaatgtaaataaccaagttatttg 199  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||| || ||||||||| | ||||    
T  2829921 tgaactcgtcggcccttcaaagactcaaattcatccataattgcatctgagctaaattgacttgcaatgtccttttcaatatagataaccaagctgtttg 2829822  T
Q  200 aaagaaaatcatcactcattttgtttctttgctttgtcttgatatttttcattgatgagaaagctctctatgttgtcactgtggagactgggagtgtcaa 299  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| | | ||   ||| |||||||||||||||||    
T  2829821 aaagaaaatcatcactcattttgtttctttgttttgtcttgagatttttcattgatgagaaagctctctctatcgttgttgtcgagactgggagtgtcaa 2829722  T
Q  300 aacaaggcgaatcaatctatcaattaaatgataacgccttgacttccctgattctactaattttttgcgcaactcagataatgttgttatattttgaaga 399  Q
    |||||| ||||||||||||||||||||||| || ||| |||| |||   ||||||||||||||||||| ||||||||| | ||||||||||||||||| |    
T  2829721 aacaagacgaatcaatctatcaattaaatgttagcgctttgatttctaagattctactaattttttgcacaactcagagagtgttgttatattttgaaaa 2829622  T
Q  400 gactgatgtatatcagcaatgtaatgacttaattgcaacctcaaatgaattctttcttgcttagagaaatcattagaatagcaagtctctgct 492  Q
    |||||| |||||||| ||||||||||||||||||||||| | | ||||| ||||||||||| || |||||||||||||||| |||||||||||    
T  2829621 gactgaggtatatcaacaatgtaatgacttaattgcaacttaagatgaagtctttcttgctcagtgaaatcattagaatagtaagtctctgct 2829529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 96 - 270
Target Start/End: Original strand, 45809538 - 45809721
Alignment:
Q  96 aaattgaactcagcggcccttcaaagactcaaattcatccataattgcatctgagctaaactgacttgcaatc----------tctttttcaatgtaaat 185  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||           | ||||| |||||||||    
T  45809538 aaattgaactcggcggcccttcaaagactcaaattcatccataattgcgt-tgagctaaactgacctgcaatactttttttttttttttttaatgtaaat 45809636  T
Q  186 aaccaagttatttgaaagaaaatcatcactcattttgtttctttgctttgtcttgatatttttcattgatgagaaagctctctat 270  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||    
T  45809637 aaccaagctatttgaaagaaaatcatcgctcattttgtttctttgttttgtcttgagatttttcattgatgagaaaactctctat 45809721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 350 - 489
Target Start/End: Complemental strand, 7527794 - 7527652
Alignment:
Q  350 attctactaattttttgcgcaactcagataatgttgttatattttgaagagactgatgtatatcagcaatg---taatgacttaattgcaacctcaaatg 446  Q
    ||||||||| |||||||| ||||||||||| | ||||||||||||||| ||||| |  ||| ||| || ||   ||||||||||||||||||||||| ||    
T  7527794 attctactagttttttgcacaactcagatagtattgttatattttgaaaagactaagttatgtcaccattgtaataatgacttaattgcaacctcaattg 7527695  T
Q  447 aattctttcttgcttagagaaatcattagaatagcaagtctct 489  Q
    || ||||||||||| |   ||||||||||||||| || |||||    
T  7527694 aaatctttcttgctcaataaaatcattagaatagtaaatctct 7527652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 113 - 187
Target Start/End: Complemental strand, 41532826 - 41532752
Alignment:
Q  113 ccttcaaagactcaaattcatccataattgcatctgagctaaactgacttgcaatctctttttcaatgtaaataa 187  Q
    |||||||||||||||||||||| |||| ||| | |||  | || ||||||||||| |||||||||||||||||||    
T  41532826 ccttcaaagactcaaattcatctataactgcttatgaatttaagtgacttgcaatgtctttttcaatgtaaataa 41532752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 187
Target Start/End: Complemental strand, 5480953 - 5480879
Alignment:
Q  113 ccttcaaagactcaaattcatccataattgcatctgagctaaactgacttgcaatctctttttcaatgtaaataa 187  Q
    |||| |||||||||||||||||||||| ||| | | || | || ||||||||||| |  ||||||||||||||||    
T  5480953 ccttgaaagactcaaattcatccataactgcctataagtttaagtgacttgcaatgttcttttcaatgtaaataa 5480879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 33335626 - 33335684
Alignment:
Q  150 gctaaactgacttgcaatctctttttcaatgtaaataaccaagttatttgaaagaaaat 208  Q
    |||||| ||||||||||| || |||||||||||||||||| |  |||||| ||||||||    
T  33335626 gctaaattgacttgcaatatccttttcaatgtaaataacctaactatttgcaagaaaat 33335684  T

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Target: chr5 (Bit Score: 232; Significance: 1e-128; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 96 - 490
Target Start/End: Complemental strand, 17172586 - 17172194
Alignment:
Q  96 aaattgaactcagcggcccttcaaagactcaaattcatccataattgcatctgagctaaactgacttgcaatctctttttcaatgtaaataaccaagtta 195  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||  | ||||| | || ||||| |||| |||||||||| ||    
T  17172586 aaattgaactcgacggcccttcaaagactcaaattcatccataattgcatctgacctaaac--atttgcattgtccttttcgatgttaataaccaagcta 17172489  T
Q  196 tttgaaagaaaatcatcactcattttgtttctttgctttgtcttgatatttttcattgatgagaaagctctctatgttgtcactgtggagactgggagtg 295  Q
    ||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||| |||||||  |||||| ||||||||||    
T  17172488 tttgaaagaaaatcatcactcattttgtttctttattttgtcttgagatttttcattgatgagaaagctctctttgttgtcgttgtggatactgggagtg 17172389  T
Q  296 tcaaaacaaggcgaatcaatctatcaattaaatgataacgccttgacttccctgattctactaattttttgcgcaactcagataatgttgttatattttg 395  Q
    | |||||| | ||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||| | ||||||||| | |||||||||||||||    
T  17172388 ttaaaacatgacgaatcaatctattaattaaatgataatgctttgacttccctgattctactaatttttttcacaactcagagagtgttgttatattttg 17172289  T
Q  396 aagagactgatgtatatcagcaatgtaatgacttaattgcaacctcaaatgaattctttcttgcttagagaaatcattagaatagcaagtctctg 490  Q
    || ||||| | |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| || |||||||| ||||||  |||||||||    
T  17172288 aaaagactaaggtatatcaacaatgtaatgacttaattgcaaccttaaatgaattctttattgctcagggaaatcataagaataaaaagtctctg 17172194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 96 - 376
Target Start/End: Complemental strand, 8403895 - 8403615
Alignment:
Q  96 aaattgaactcagcggcccttcaaagactcaaattcatccataattgcatctgagctaaactgacttgcaatctctttttcaatgtaaataaccaagtta 195  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |  |||||||||||| |||||||  ||    
T  8403895 aaattgaactcggcgacccttcaaagactcaaattcatccataattgcatcagagataaactgacttgcaatgttcttttcaatgtaagtaaccaaacta 8403796  T
Q  196 tttgaaagaaaatcatcactcattttgtttctttgctttgtcttgatatttttcattgatgagaaagctctctatgttgtcactgtggagactgggagtg 295  Q
    |||| ||||||||||||  |||||||||||||||| ||| |||||| |||||||||||||||||||| |||||   ||||   |||||||| | | ||||    
T  8403795 tttgcaagaaaatcatctatcattttgtttctttgttttatcttgagatttttcattgatgagaaagttctctccattgttgttgtggagattagaagtg 8403696  T
Q  296 tcaaaacaaggcgaatcaatctatcaattaaatgataacgccttgacttccctgattctactaattttttgcgcaactcag 376  Q
    | ||||||||  ||||||||||||||||||||||||||| |  ||| |||   |||||||||||| |||||| ||||||||    
T  8403695 ttaaaacaagaagaatcaatctatcaattaaatgataacacaatgatttcttcgattctactaatattttgcacaactcag 8403615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 113 - 187
Target Start/End: Complemental strand, 12106070 - 12105996
Alignment:
Q  113 ccttcaaagactcaaattcatccataattgcatctgagctaaactgacttgcaatctctttttcaatgtaaataa 187  Q
    |||||||||||||||||||||| |||| ||| | |||| | |  ||||||||||| |||||||||||||||||||    
T  12106070 ccttcaaagactcaaattcatctataactgcttatgagtttatgtgacttgcaatgtctttttcaatgtaaataa 12105996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 187
Target Start/End: Complemental strand, 21361319 - 21361245
Alignment:
Q  113 ccttcaaagactcaaattcatccataattgcatctgagctaaactgacttgcaatctctttttcaatgtaaataa 187  Q
    |||||||||||||||||||||| |||| ||| | |||  | || |||||| |||| |||||||||||||||||||    
T  21361319 ccttcaaagactcaaattcatctataactgcttatgaatttaagtgacttacaatgtctttttcaatgtaaataa 21361245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 197; Significance: 1e-107; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 96 - 492
Target Start/End: Complemental strand, 7640177 - 7639783
Alignment:
Q  96 aaattgaactcagcggcccttcaaagactcaaattcatccataattgcatctgagctaaactgacttgcaatctctttttcaatgtaaataaccaagtta 195  Q
    |||||||||||  || || |||||| |||||||||||||||||||||||||||||||||  ||||||||||| || |||||||||||||||||||| |||    
T  7640177 aaattgaactcgacgacctttcaaaaactcaaattcatccataattgcatctgagctaagttgacttgcaatgtccttttcaatgtaaataaccaaatta 7640078  T
Q  196 tttgaaagaaaatcatcactcattttgtttctttgctttgtcttgatatttttcattgatgagaaagctctctatgttgtcactgtggagactgggagtg 295  Q
    |||| | ||||||||||||||||||||||| |||  |||| ||||| |||||||||||| ||||||| ||||||||||||   ||||||||||||||||     
T  7640077 tttgcatgaaaatcatcactcattttgtttgtttattttgccttgagatttttcattgacgagaaagttctctatgttgttg-tgtggagactgggagta 7639979  T
Q  296 ---tcaaaacaaggcgaatcaatctatcaattaaatgataacgccttgacttccctgattctactaattttttgcgcaactcagataatgttgttatatt 392  Q
       | |||||||| ||||||||| |||||||||||||||||||| |||||||||| |||| ||||||||||||||     ||||| |  |||||||||||    
T  7639978 ctataaaaacaagacgaatcaatttatcaattaaatgataacgctttgacttccccgattatactaattttttgc----atcagagagcgttgttatatt 7639883  T
Q  393 ttgaagagactgatgtatatcagcaatgtaatgacttaattgcaacctcaaatgaattctttcttgcttagagaaatcattagaatagcaagtctctgct 492  Q
    ||||| ||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||| || |||||| | ||||||| |||||||||||    
T  7639882 ttgaaaagactgaggtatatcatgaatgtaatgacttaattgcaacctcaaatgaattctttcttgctcagtgaaatcgtaagaatagaaagtctctgct 7639783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 96 - 427
Target Start/End: Original strand, 30383838 - 30384168
Alignment:
Q  96 aaattgaactcagcggcccttcaaagactcaaattcatccataattgcatctgagctaaactgacttgcaatctctttttcaatgtaaataaccaagtta 195  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |  ||||||| ||| ||||||||| |     
T  30383838 aaattgaactcgtcggcccttcaaagactcaaattcatccataattgcatctgagctaaattgacttgcaatgttcttttcaacgtagataaccaagctg 30383937  T
Q  196 tttgaaagaaaatcatcactcattttgtttctttgctttgtcttgatatttttcattgatgag-aaagctctctatgttgtcactgtggagactgggagt 294  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| |||| |||||||||| ||| ||  |||| |||||| |||||    
T  30383938 tttgaaagaaaatcatcactcattttgtttctttgttttgtcttgagctttttcattgctgagaaaagctctctttgtcgttgctgtcgagactaggagt 30384037  T
Q  295 gtcaaaacaaggcgaatcaatctatcaattaaatgataacgccttgacttccctgattctactaattttttgcgcaactcagataatgttgttatatttt 394  Q
    ||||||||||| ||||||||||||||||| |||||||| ||| |||| ||| | ||||||||||||||||||| |||||  || | | ||||||||||||    
T  30384038 gtcaaaacaagacgaatcaatctatcaataaaatgatagcgctttgatttctcagattctactaattttttgcacaact--gagagttttgttatatttt 30384135  T
Q  395 gaagagactgatgtatatcagcaatgtaatgac 427  Q
    ||| || |||| |||||||| ||||||||||||    
T  30384136 gaaaagtctgaggtatatcaacaatgtaatgac 30384168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 96 - 327
Target Start/End: Original strand, 582904 - 583132
Alignment:
Q  96 aaattgaactcagcggcccttcaaagactcaaattcatccataattgcatctgagctaaactgacttgcaatctctttttcaatgtaaataaccaagtta 195  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||   ||||||||| ||||||||||||| ||| |||||| ||    
T  582904 aaattgaactcggctgcccttcaaagactcaaattcatccataattgcatcttagctaaatgaacttgcaatgtctttttcaatgttaatgaccaagcta 583003  T
Q  196 tttgaaagaaaatcatcactcattttgtttctttgctttgtcttgatatttttcattgatgagaaagctctctatgttgtcactgtggagactgggagtg 295  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||| ||   |||||  | |||||||||||||||    
T  583004 tttgaaagaaaatcatcactcattttgtttcattgttttgtcttgagatttttcattgatgagaaagctcgct---ttgtcgttatggagactgggagtg 583100  T
Q  296 tcaaaacaaggcgaatcaatctatcaattaaa 327  Q
    ||||||||||| ||||||||||||||||||||    
T  583101 tcaaaacaaggtgaatcaatctatcaattaaa 583132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 96 - 327
Target Start/End: Complemental strand, 3886613 - 3886382
Alignment:
Q  96 aaattgaactcagcggcccttcaaagactcaaattcatccataattgcatctgagctaaactgacttgcaatctctttttcaatgtaaataaccaagtta 195  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||  |||||||||| ||||||||||||| ||| || ||| ||    
T  3886613 aaattgaactcggcggcccgtcaaagactcaaattcatccataattgcatcttagctaaatggacttgcaatgtctttttcaatgttaatgactaagcta 3886514  T
Q  196 tttgaaagaaaatcatcactcattttgtttctttgctttgtcttgatatttttcattgatgagaaagctctctatgttgtcactgtggagactgggagtg 295  Q
    |||||||||||||||||||||||||| |||| ||| |||||||||| |||||| |||||||||||||||| || |||||||  | |||||||||||||||    
T  3886513 tttgaaagaaaatcatcactcattttatttcattgttttgtcttgagattttttattgatgagaaagctcgctctgttgtcgttatggagactgggagtg 3886414  T
Q  296 tcaaaacaaggcgaatcaatctatcaattaaa 327  Q
    |||||||| || ||||||||||||||||||||    
T  3886413 tcaaaacatggtgaatcaatctatcaattaaa 3886382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 178; Significance: 8e-96; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 96 - 492
Target Start/End: Complemental strand, 25280568 - 25280179
Alignment:
Q  96 aaattgaactcagcggcccttcaaagactcaaattcatccataattgcatctgagctaaactgacttgcaatctctttttcaatgtaaataaccaagtta 195  Q
    |||||||||||  |  |||||||||||||||||||||||||||||||||||| || ||||| |||||||||| || ||||||||||||||||||||| ||    
T  25280568 aaattgaactcgaccacccttcaaagactcaaattcatccataattgcatctcaggtaaaccgacttgcaatgtccttttcaatgtaaataaccaagcta 25280469  T
Q  196 tttgaaagaaaatcatcactcattttgtttctttgctttgtcttgatatttttcattgatgagaaagctctctatgttgtcactgtggagactgggagtg 295  Q
     ||| |||||||||||||||||||||||||||||  |||||||  | ||| |||||||||||||||||||||| | ||||   |||||||| | ||||||    
T  25280468 cttgcaagaaaatcatcactcattttgtttctttattttgtctcaagattcttcattgatgagaaagctctctctcttgt---tgtggagattaggagtg 25280372  T
Q  296 tcaaaacaaggcgaatcaatctatcaattaaatgataacgccttgacttccctgattctactaattttttgcgcaactcagataatgttgttatattttg 395  Q
    |||||||||| ||||||||| ||||||||||||||||| || |||| ||||| |||| |||||||||||||| |    || | | |||||||| ||||||    
T  25280371 tcaaaacaagacgaatcaatatatcaattaaatgataatgctttgatttccccgattatactaattttttgcac----caaagagtgttgttaaattttg 25280276  T
Q  396 aagagactgatgtatatcagcaatgtaatgacttaattgcaacctcaaatgaattctttcttgcttagagaaatcattagaatagcaagtctctgct 492  Q
    || |||||||  ||||| ||||||||||||||||| ||||||||||||||||  ||||||||||| ||  ||||||| ||||||| | |||||||||    
T  25280275 aaaagactgagatatattagcaatgtaatgacttacttgcaacctcaaatgagctctttcttgctcagtaaaatcataagaatagaacgtctctgct 25280179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 96 - 327
Target Start/End: Original strand, 1592676 - 1592904
Alignment:
Q  96 aaattgaactcagcggcccttcaaagactcaaattcatccataattgcatctgagctaaactgacttgcaatctctttttcaatgtaaataaccaagtta 195  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||  |||||||||| ||||||||||||| ||| |||||| ||    
T  1592676 aaattgaactcggcggcccttcaaagactcaaattcatccataattgcatcttaactaaatggacttgcaatgtctttttcaatgttaatgaccaagcta 1592775  T
Q  196 tttgaaagaaaatcatcactcattttgtttctttgctttgtcttgatatttttcattgatgagaaagctctctatgttgtcactgtggagactgggagtg 295  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||| ||   |||||  | |||||||| ||||||    
T  1592776 tttgaaagaaaatcatcactcattttgtttcattgttttgtcttgagatttttcattgatgagaaagctcgct---ttgtcgttatggagactaggagtg 1592872  T
Q  296 tcaaaacaaggcgaatcaatctatcaattaaa 327  Q
    | ||||||||| ||||||||||||||||||||    
T  1592873 taaaaacaaggtgaatcaatctatcaattaaa 1592904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 96 - 327
Target Start/End: Original strand, 36314159 - 36314387
Alignment:
Q  96 aaattgaactcagcggcccttcaaagactcaaattcatccataattgcatctgagctaaactgacttgcaatctctttttcaatgtaaataaccaagtta 195  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||| ||||||||||||| ||| |||||| ||    
T  36314159 aaattgaactcggcggcccttcaaagactcaaattcatccataattgcatcttagctaaatggacttgcaatgtctttttcaatgttaatgaccaagcta 36314258  T
Q  196 tttgaaagaaaatcatcactcattttgtttctttgctttgtcttgatatttttcattgatgagaaagctctctatgttgtcactgtggagactgggagtg 295  Q
    ||||||||||||||||||||||||||||||  ||| |||||||||| ||||||||||||||||||||||| ||   |||||  | |||||| ||||||||    
T  36314259 tttgaaagaaaatcatcactcattttgttttattgttttgtcttgagatttttcattgatgagaaagctcgct---ttgtcgttatggagattgggagtg 36314355  T
Q  296 tcaaaacaaggcgaatcaatctatcaattaaa 327  Q
    ||||||||||  ||||||||||||||||||||    
T  36314356 tcaaaacaagatgaatcaatctatcaattaaa 36314387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 96 - 291
Target Start/End: Original strand, 5380980 - 5381175
Alignment:
Q  96 aaattgaactcagcggcccttcaaagactcaaattcatccataattgcatctgagctaaactgacttgcaatctctttttcaatgtaaataaccaagtta 195  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |  ||||||||||| |||||||||||     
T  5380980 aaattgaactcgtcggcccttcaaagactcaaattcatccataattgcatctgagctaaattgacttgcaatgttcttttcaatgtagataaccaagttg 5381079  T
Q  196 tttgaaagaaaatcatcactcattttgtttctttgctttgtcttgatatttttcattgatgagaaagctctctatgttgtcactgtggagactggg 291  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||| ||  |||| |||||||||    
T  5381080 tttgaaagaaaatcatcactcattttgtttctttgttttgtcttgagatttttcattgatgagaaagctctctctgtcgttgctgtcgagactggg 5381175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 96 - 207
Target Start/End: Original strand, 19590539 - 19590650
Alignment:
Q  96 aaattgaactcagcggcccttcaaagactcaaattcatccataattgcatctgagctaaactgacttgcaatctctttttcaatgtaaataaccaagtta 195  Q
    |||||||||||   | ||||||||| ||||||||||||||||| |||||||| ||||||| ||||||| ||| || |||||||||||||||||||   ||    
T  19590539 aaattgaactcgaagacccttcaaaaactcaaattcatccatagttgcatcttagctaaaatgacttgaaatgtccttttcaatgtaaataaccatacta 19590638  T
Q  196 tttgaaagaaaa 207  Q
    |||| |||||||    
T  19590639 tttgcaagaaaa 19590650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 101 - 187
Target Start/End: Original strand, 41055527 - 41055613
Alignment:
Q  101 gaactcagcggcccttcaaagactcaaattcatccataattgcatctgagctaaactgacttgcaatctctttttcaatgtaaataa 187  Q
    ||||||| || || || |||||||||||||||||||||||||  | |||||||||||||| | |||| || ||||||||||||||||    
T  41055527 gaactcaacgaccttttaaagactcaaattcatccataattgtctatgagctaaactgacatccaatgtccttttcaatgtaaataa 41055613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 307 - 403
Target Start/End: Complemental strand, 10413125 - 10413029
Alignment:
Q  307 cgaatcaatctatcaattaaatgataacgccttgacttccctgattctactaattttttgcgcaactcagataatgttgttatattttgaagagact 403  Q
    |||||||||||||||||| ||||| | ||  || ||||| | |||||| |||||||||||| ||||||| | |||||||||||||||| || |||||    
T  10413125 cgaatcaatctatcaatttaatgacagcgttttaacttcgcagattctgctaattttttgcacaactcaaagaatgttgttatattttaaaaagact 10413029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 113 - 187
Target Start/End: Original strand, 21613028 - 21613102
Alignment:
Q  113 ccttcaaagactcaaattcatccataattgcatctgagctaaactgacttgcaatctctttttcaatgtaaataa 187  Q
    |||||||||||||||||||||| |||| ||| | |||  | || ||||||||||| |||||||||||||||||||    
T  21613028 ccttcaaagactcaaattcatctataactgcttatgaatttaagtgacttgcaatgtctttttcaatgtaaataa 21613102  T

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Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 162
Target Start/End: Original strand, 12563591 - 12563640
Alignment:
Q  113 ccttcaaagactcaaattcatccataattgcatctgagctaaactgactt 162  Q
    |||||||| |||||||||||| ||||||||||| |||||||||| |||||    
T  12563591 ccttcaaaaactcaaattcattcataattgcatttgagctaaaccgactt 12563640  T

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Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 187
Target Start/End: Complemental strand, 21279023 - 21278949
Alignment:
Q  113 ccttcaaagactcaaattcatccataattgcatctgagctaaactgacttgcaatctctttttcaatgtaaataa 187  Q
    |||||||| |||||||||||||||||| ||| | |||| | || ||||||||||| || |||| ||| |||||||    
T  21279023 ccttcaaatactcaaattcatccataagtgcctatgagtttaagtgacttgcaatatcctttttaatataaataa 21278949  T

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Target: chr8 (Bit Score: 152; Significance: 3e-80; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 96 - 327
Target Start/End: Complemental strand, 18606491 - 18606260
Alignment:
Q  96 aaattgaactcagcggcccttcaaagactcaaattcatccataattgcatctgagctaaactgacttgcaatctctttttcaatgtaaataaccaagtta 195  Q
    ||||||||||| |||| ||||||||||| ||||||||||||||||||||||| |||||||  |||||||||| ||||||||||||| ||| || ||| ||    
T  18606491 aaattgaactcggcggtccttcaaagacccaaattcatccataattgcatcttagctaaatggacttgcaatgtctttttcaatgttaatgactaagcta 18606392  T
Q  196 tttgaaagaaaatcatcactcattttgtttctttgctttgtcttgatatttttcattgatgagaaagctctctatgttgtcactgtggagactgggagtg 295  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||| || |||||||  | |||||||||||||||    
T  18606391 tttgaaagaaaatcatcactcattttgtttcattgttttgtcttgagatttttcattgatgagaaagctcgctctgttgtcgttatggagactgggagtg 18606292  T
Q  296 tcaaaacaaggcgaatcaatctatcaattaaa 327  Q
    ||||||||||| ||||||||||||||||||||    
T  18606291 tcaaaacaaggtgaatcaatctatcaattaaa 18606260  T

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Target: chr8; HSP #2
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 96 - 276
Target Start/End: Complemental strand, 2812493 - 2812313
Alignment:
Q  96 aaattgaactcagcggcccttcaaagactcaaattcatccataattgcatctgagctaaactgacttgcaatctctttttcaatgtaaataaccaagtta 195  Q
    ||||||||||| | ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||    
T  2812493 aaattgaactcggtggctcttcaaagactcaaattcatccataattgcatctgagttaaactgacttgcaatgtctttttcaatgtaaataaccaagcta 2812394  T
Q  196 tttgaaagaaaatcatcactcattttgtttctttgctttgtcttgatatttttcattgatgagaaagctctctatgttgtc 276  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||    
T  2812393 tttgaaagaaaatcatcactcattttgtttctttgttttgtcttgagatttttcattgatgagaaagctctctctgttgtc 2812313  T

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Target: chr8; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 122 - 270
Target Start/End: Complemental strand, 26858604 - 26858456
Alignment:
Q  122 actcaaattcatccataattgcatctgagctaaactgacttgcaatctctttttcaatgtaaataaccaagttatttgaaagaaaatcatcactcatttt 221  Q
    ||||||||||||||||| |||| ||||||||||||||| |||||||  | |||||||||| |||||||||| |||||  | ||||||| |||||| ||||    
T  26858604 actcaaattcatccatatttgcctctgagctaaactgatttgcaatgaccttttcaatgtcaataaccaagctattttcatgaaaatcgtcactcgtttt 26858505  T
Q  222 gtttctttgctttgtcttgatatttttcattgatgagaaagctctctat 270  Q
     |||||||  |||||||||| |||||||||||  |||||||||||||||    
T  26858504 atttctttattttgtcttgagatttttcattgccgagaaagctctctat 26858456  T

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Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 115 - 187
Target Start/End: Original strand, 35816398 - 35816470
Alignment:
Q  115 ttcaaagactcaaattcatccataattgcatctgagctaaactgacttgcaatctctttttcaatgtaaataa 187  Q
    |||||||||||||| ||||  ||||| |  ||| || |||||||||||||||| ||||||||||| |||||||    
T  35816398 ttcaaagactcaaactcattgataatggtctctaagttaaactgacttgcaatatctttttcaatataaataa 35816470  T

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Target: chr3 (Bit Score: 130; Significance: 4e-67; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 96 - 305
Target Start/End: Original strand, 35734051 - 35734258
Alignment:
Q  96 aaattgaactcagcggcccttcaaagactcaaattcatccataattgcatctgagctaaactgacttgcaatctctttttcaatgtaaataaccaagtta 195  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| || ||||||||||| ||||||||| ||    
T  35734051 aaattgaactcggcggcccttcaaagactcaaattcattcataattgcatctgagctaaattgacttgcaatgtccttttcaatgtagataaccaagcta 35734150  T
Q  196 tttgaaagaaaatcatcactcattttgtttctttgctttgtcttgatatttttcattgatgagaaagctctctatgttgtcactgtggagactgggagtg 295  Q
    ||||||| ||||| ||||||||||||||||||||  |||||||||| |||||||||||||||||||| ||||| |||||||  ||||||||||| ||||     
T  35734151 tttgaaa-aaaat-atcactcattttgtttctttcttttgtcttgagatttttcattgatgagaaagttctctctgttgtcgttgtggagactgtgagta 35734248  T
Q  296 tcaaaacaag 305  Q
    ||||||||||    
T  35734249 tcaaaacaag 35734258  T

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Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 113 - 187
Target Start/End: Complemental strand, 52725019 - 52724945
Alignment:
Q  113 ccttcaaagactcaaattcatccataattgcatctgagctaaactgacttgcaatctctttttcaatgtaaataa 187  Q
    |||||||||||||||||||||| |||| ||| | |||  | || ||||||||||| |||||||||||||||||||    
T  52725019 ccttcaaagactcaaattcatctataaatgcttatgaatttaagtgacttgcaatgtctttttcaatgtaaataa 52724945  T

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Target: chr1 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 96 - 270
Target Start/End: Complemental strand, 7493904 - 7493726
Alignment:
Q  96 aaattgaactcagcggcccttcaaagactcaaattcatccataattgcatctgagctaaactgacttgcaatctct----ttttcaatgtaaataaccaa 191  Q
    ||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| | |    |||| |||||||||||||||    
T  7493904 aaattgaactcggcagcccttcaaagactcaaatttatccataattgcatctgagctaaactgacctgcaatatatattttttttaatgtaaataaccaa 7493805  T
Q  192 gttatttgaaagaaaatcatcactcattttgtttctttgctttgtcttgatatttttcattgatgagaaagctctctat 270  Q
    | ||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||    
T  7493804 gctatttgaaagaaaatcatcgctcattttgtttctttgttttgtcttgagatttttcattgatcagaaagctctctat 7493726  T

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