View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10651_high_10 (Length: 203)

Name: NF10651_high_10
Description: NF10651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10651_high_10
NF10651_high_10
[»] chr8 (27 HSPs)
chr8 (19-185)||(8781393-8781559)
chr8 (19-112)||(26241102-26241195)
chr8 (13-112)||(21941357-21941456)
chr8 (19-112)||(8370845-8370938)
chr8 (19-112)||(25611812-25611905)
chr8 (13-112)||(6094815-6094914)
chr8 (19-112)||(22130202-22130295)
chr8 (19-112)||(28548745-28548838)
chr8 (19-150)||(18835963-18836094)
chr8 (19-185)||(22659014-22659179)
chr8 (19-112)||(6431504-6431597)
chr8 (13-112)||(15326890-15326989)
chr8 (13-112)||(15507259-15507358)
chr8 (21-112)||(21969952-21970043)
chr8 (19-112)||(27007110-27007203)
chr8 (19-112)||(27014253-27014346)
chr8 (19-112)||(21917292-21917385)
chr8 (19-112)||(27880080-27880173)
chr8 (19-112)||(28020261-28020354)
chr8 (13-97)||(32872281-32872365)
chr8 (28-112)||(14978901-14978983)
chr8 (19-112)||(45533866-45533959)
chr8 (45-93)||(8967747-8967795)
chr8 (19-112)||(24643345-24643438)
chr8 (48-145)||(37031842-37031941)
chr8 (19-109)||(2962526-2962616)
chr8 (19-112)||(24796421-24796514)
[»] chr7 (37 HSPs)
chr7 (13-185)||(15168813-15168985)
chr7 (13-185)||(24442897-24443068)
chr7 (13-185)||(25845041-25845214)
chr7 (19-185)||(18257087-18257250)
chr7 (23-185)||(31189892-31190052)
chr7 (19-185)||(8465616-8465781)
chr7 (19-170)||(12410114-12410263)
chr7 (13-112)||(18561690-18561789)
chr7 (13-112)||(29328476-29328575)
chr7 (19-112)||(18400720-18400813)
chr7 (19-112)||(18407704-18407797)
chr7 (19-112)||(24850975-24851068)
chr7 (23-112)||(41680560-41680649)
chr7 (19-185)||(47166380-47166544)
chr7 (13-112)||(11535478-11535577)
chr7 (13-112)||(11542396-11542495)
chr7 (13-112)||(15153135-15153234)
chr7 (13-112)||(19231499-19231598)
chr7 (43-157)||(19389202-19389316)
chr7 (19-112)||(18258715-18258808)
chr7 (19-170)||(12393246-12393395)
chr7 (19-150)||(19392982-19393111)
chr7 (19-112)||(30254754-30254847)
chr7 (19-112)||(34129191-34129284)
chr7 (19-112)||(48808089-48808182)
chr7 (13-112)||(12739226-12739325)
chr7 (19-112)||(13392847-13392940)
chr7 (19-112)||(18138931-18139024)
chr7 (19-112)||(2205168-2205261)
chr7 (19-112)||(15730367-15730460)
chr7 (13-112)||(12751518-12751617)
chr7 (20-112)||(28131180-28131272)
chr7 (20-111)||(39112495-39112586)
chr7 (52-112)||(10666656-10666716)
chr7 (23-85)||(14592514-14592576)
chr7 (54-86)||(2635040-2635072)
chr7 (65-109)||(11557458-11557502)
[»] chr3 (31 HSPs)
chr3 (19-181)||(26816909-26817071)
chr3 (19-146)||(15538153-15538280)
chr3 (19-112)||(21034855-21034948)
chr3 (19-112)||(21399409-21399502)
chr3 (19-150)||(14147637-14147767)
chr3 (19-112)||(15846128-15846221)
chr3 (19-112)||(25978319-25978412)
chr3 (13-112)||(6110756-6110855)
chr3 (13-112)||(8491187-8491286)
chr3 (13-112)||(10572008-10572107)
chr3 (13-112)||(10578772-10578871)
chr3 (13-112)||(15600300-15600399)
chr3 (13-112)||(15606845-15606944)
chr3 (19-112)||(15316767-15316860)
chr3 (13-112)||(13211994-13212093)
chr3 (13-112)||(16481899-16481998)
chr3 (13-112)||(17137045-17137144)
chr3 (13-112)||(17197171-17197270)
chr3 (13-112)||(17780534-17780633)
chr3 (13-112)||(23014776-23014875)
chr3 (13-112)||(13517499-13517598)
chr3 (13-112)||(15357002-15357101)
chr3 (19-112)||(12300526-12300619)
chr3 (19-112)||(20147147-20147240)
chr3 (13-112)||(15341635-15341734)
chr3 (21-110)||(1646939-1647028)
chr3 (19-112)||(28088723-28088816)
chr3 (19-112)||(55427637-55427730)
chr3 (13-57)||(18520667-18520711)
chr3 (20-60)||(11788206-11788246)
chr3 (47-99)||(35199074-35199126)
[»] chr2 (23 HSPs)
chr2 (13-151)||(29801083-29801221)
chr2 (13-185)||(20686941-20687105)
chr2 (19-185)||(24763192-24763356)
chr2 (19-112)||(24249625-24249718)
chr2 (19-112)||(30174993-30175086)
chr2 (13-112)||(21329664-21329763)
chr2 (13-109)||(41661964-41662060)
chr2 (19-112)||(22791274-22791367)
chr2 (19-112)||(36270857-36270950)
chr2 (20-150)||(19617053-19617181)
chr2 (19-112)||(24228806-24228899)
chr2 (21-85)||(15341620-15341684)
chr2 (28-112)||(18620507-18620591)
chr2 (19-110)||(12298451-12298542)
chr2 (19-90)||(41332826-41332899)
chr2 (19-60)||(18797204-18797245)
chr2 (46-111)||(18822734-18822799)
chr2 (19-111)||(31848073-31848165)
chr2 (39-111)||(40300567-40300638)
chr2 (62-112)||(6991510-6991560)
chr2 (127-185)||(15341562-15341619)
chr2 (19-79)||(6991568-6991628)
chr2 (20-60)||(22182960-22183000)
[»] chr6 (30 HSPs)
chr6 (13-181)||(10358577-10358745)
chr6 (19-150)||(22559750-22559880)
chr6 (19-112)||(14075097-14075190)
chr6 (19-112)||(18019421-18019514)
chr6 (13-112)||(17690856-17690955)
chr6 (13-112)||(27380668-27380767)
chr6 (13-112)||(27471051-27471150)
chr6 (13-112)||(29309582-29309681)
chr6 (13-112)||(29316541-29316640)
chr6 (19-112)||(16558888-16558981)
chr6 (13-112)||(11652415-11652514)
chr6 (13-112)||(18336346-18336445)
chr6 (23-150)||(19734799-19734925)
chr6 (23-150)||(19735074-19735200)
chr6 (19-150)||(21995576-21995706)
chr6 (13-112)||(27297321-27297420)
chr6 (36-185)||(19219156-19219302)
chr6 (19-109)||(27507943-27508033)
chr6 (19-109)||(27525157-27525247)
chr6 (19-112)||(25536607-25536700)
chr6 (13-112)||(17683885-17683984)
chr6 (19-112)||(16789687-16789780)
chr6 (19-112)||(22859481-22859574)
chr6 (19-112)||(1585701-1585794)
chr6 (19-112)||(33317483-33317576)
chr6 (13-112)||(28173228-28173324)
chr6 (21-112)||(28755663-28755754)
chr6 (19-112)||(8613537-8613630)
chr6 (42-112)||(13175017-13175087)
chr6 (19-92)||(8510477-8510550)
[»] chr4 (51 HSPs)
chr4 (23-150)||(9538580-9538707)
chr4 (19-185)||(32637101-32637266)
chr4 (13-134)||(5617007-5617127)
chr4 (13-185)||(19373957-19374128)
chr4 (19-112)||(1942307-1942400)
chr4 (19-112)||(28917367-28917460)
chr4 (13-112)||(26964332-26964431)
chr4 (13-112)||(26971155-26971254)
chr4 (19-112)||(2677629-2677722)
chr4 (19-112)||(15462118-15462211)
chr4 (19-112)||(34976169-34976262)
chr4 (13-112)||(869289-869388)
chr4 (13-112)||(5667546-5667645)
chr4 (13-112)||(5714639-5714738)
chr4 (13-112)||(8858859-8858958)
chr4 (13-112)||(10620749-10620848)
chr4 (13-112)||(18262904-18263003)
chr4 (13-112)||(19926176-19926275)
chr4 (19-112)||(26532229-26532323)
chr4 (19-128)||(5524566-5524675)
chr4 (19-112)||(24699671-24699764)
chr4 (19-107)||(9488165-9488253)
chr4 (13-112)||(5708011-5708110)
chr4 (43-150)||(11421628-11421734)
chr4 (13-112)||(18269765-18269864)
chr4 (13-112)||(35224250-35224349)
chr4 (13-112)||(55613375-55613474)
chr4 (13-147)||(19363021-19363154)
chr4 (19-109)||(30040084-30040174)
chr4 (19-112)||(4426031-4426124)
chr4 (19-112)||(8845901-8845994)
chr4 (13-112)||(10627831-10627927)
chr4 (19-112)||(15815637-15815730)
chr4 (13-112)||(28392550-28392649)
chr4 (19-112)||(4546680-4546773)
chr4 (19-112)||(5871033-5871126)
chr4 (19-112)||(17299552-17299645)
chr4 (19-112)||(18110636-18110729)
chr4 (13-109)||(10676996-10677092)
chr4 (13-109)||(10890636-10890732)
chr4 (19-112)||(4675576-4675669)
chr4 (19-112)||(18163778-18163871)
chr4 (19-112)||(20244553-20244646)
chr4 (13-109)||(10689971-10690067)
chr4 (13-109)||(10903611-10903707)
chr4 (19-112)||(3368616-3368709)
chr4 (121-185)||(5524308-5524372)
chr4 (13-112)||(24701694-24701793)
chr4 (65-112)||(47388360-47388407)
chr4 (92-150)||(30040027-30040084)
chr4 (65-99)||(39423014-39423048)
[»] chr5 (23 HSPs)
chr5 (13-112)||(17314397-17314496)
chr5 (19-185)||(25804905-25805070)
chr5 (19-157)||(31651326-31651464)
chr5 (19-112)||(20941644-20941737)
chr5 (19-112)||(22941868-22941961)
chr5 (19-112)||(31097433-31097526)
chr5 (13-112)||(17298321-17298419)
chr5 (13-112)||(24694874-24694973)
chr5 (13-112)||(24701638-24701737)
chr5 (19-112)||(32515-32608)
chr5 (19-112)||(23546538-23546631)
chr5 (19-150)||(9811286-9811417)
chr5 (13-112)||(19706635-19706734)
chr5 (13-108)||(19713918-19714013)
chr5 (19-137)||(5098266-5098382)
chr5 (19-112)||(12764581-12764674)
chr5 (19-150)||(39535809-39535931)
chr5 (13-112)||(17282874-17282973)
chr5 (19-112)||(12789256-12789349)
chr5 (19-112)||(24932899-24932992)
chr5 (19-82)||(18567946-18568009)
chr5 (19-112)||(7865021-7865114)
chr5 (21-87)||(39539248-39539314)
[»] chr1 (29 HSPs)
chr1 (19-185)||(28134243-28134408)
chr1 (19-112)||(19706031-19706124)
chr1 (19-112)||(9456732-9456825)
chr1 (19-112)||(9460828-9460921)
chr1 (19-112)||(20779238-20779331)
chr1 (13-112)||(18252722-18252821)
chr1 (13-112)||(18531930-18532029)
chr1 (13-112)||(27309993-27310092)
chr1 (19-112)||(22613109-22613201)
chr1 (19-112)||(27276976-27277069)
chr1 (19-112)||(47667077-47667170)
chr1 (13-112)||(27130826-27130925)
chr1 (19-112)||(33283449-33283542)
chr1 (19-112)||(35935941-35936034)
chr1 (19-112)||(36816051-36816144)
chr1 (19-112)||(43801957-43802050)
chr1 (19-150)||(8728280-8728410)
chr1 (13-112)||(16358451-16358550)
chr1 (19-109)||(634556-634645)
chr1 (19-112)||(20390832-20390925)
chr1 (19-112)||(22669850-22669943)
chr1 (13-112)||(31234340-31234439)
chr1 (19-112)||(14482506-14482599)
chr1 (19-112)||(42816582-42816675)
chr1 (13-112)||(22641298-22641397)
chr1 (21-112)||(35132557-35132647)
chr1 (43-97)||(51550294-51550346)
chr1 (32-110)||(16069669-16069746)
chr1 (43-107)||(14234606-14234670)
[»] scaffold0112 (1 HSPs)
scaffold0112 (19-112)||(800-893)
[»] scaffold0390 (2 HSPs)
scaffold0390 (13-112)||(13366-13465)
scaffold0390 (13-112)||(6350-6449)
[»] scaffold0111 (1 HSPs)
scaffold0111 (19-150)||(27159-27289)
[»] scaffold0389 (1 HSPs)
scaffold0389 (19-112)||(779-872)
[»] scaffold0028 (1 HSPs)
scaffold0028 (19-112)||(120346-120439)
[»] scaffold0006 (1 HSPs)
scaffold0006 (19-112)||(67000-67093)
[»] scaffold0220 (1 HSPs)
scaffold0220 (13-109)||(18979-19075)
[»] scaffold0023 (1 HSPs)
scaffold0023 (13-144)||(108682-108814)
[»] scaffold0433 (1 HSPs)
scaffold0433 (13-112)||(7799-7898)
[»] scaffold0234 (2 HSPs)
scaffold0234 (13-112)||(1737-1836)
scaffold0234 (13-112)||(10628-10727)
[»] scaffold0063 (1 HSPs)
scaffold0063 (13-112)||(6214-6313)
[»] scaffold0061 (2 HSPs)
scaffold0061 (13-112)||(126-225)
scaffold0061 (13-112)||(5637-5736)
[»] scaffold0031 (1 HSPs)
scaffold0031 (21-112)||(39579-39670)
[»] scaffold0686 (1 HSPs)
scaffold0686 (30-112)||(8106-8188)
[»] scaffold0017 (1 HSPs)
scaffold0017 (34-112)||(128128-128206)
[»] scaffold0264 (1 HSPs)
scaffold0264 (19-112)||(3268-3361)
[»] scaffold0086 (1 HSPs)
scaffold0086 (19-112)||(54380-54473)
[»] scaffold0008 (1 HSPs)
scaffold0008 (19-112)||(229807-229900)
[»] scaffold0466 (1 HSPs)
scaffold0466 (19-78)||(12575-12634)
[»] scaffold1303 (1 HSPs)
scaffold1303 (65-112)||(1378-1425)
[»] scaffold0160 (1 HSPs)
scaffold0160 (22-112)||(24473-24560)


Alignment Details
Target: chr8 (Bit Score: 151; Significance: 4e-80; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 19 - 185
Target Start/End: Complemental strand, 8781559 - 8781393
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaatataac 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||    
T  8781559 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaggaacttatagggtcacacacagtataac 8781460  T
Q  119 gttcaaaaggagaaatataagtaagacttataacttgggttgtatttagcaaataacgctaattagt 185  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8781459 gttcaaaaggagaaatataagtaagacttataacttggggtgtatttagcaaataacgctaattagt 8781393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 26241102 - 26241195
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||||||||||||||  | |||||||||||||| |||||| || |||||||||||||||||||||||    
T  26241102 gatgtgttgctagataccgctcattgtttataatattaaatatcagatttaatattattgccaatgtgactagaacctatagggtcacacacaa 26241195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 21941357 - 21941456
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    ||||||||||||||||||||||||  ||||||||||||||||||||||    
T  21941357 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgtcaatgttacgggaacctatagggtcacacacaa 21941456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 8370938 - 8370845
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||||||||||||||  | |||||||||||||| ||| || || |||||||||||||||||||||||    
T  8370938 gatgtgttgctagataccgctcattgtttataatattaaatatcagatttaatattattgccaacgtgactagaacctatagggtcacacacaa 8370845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 25611812 - 25611905
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| ||||||||||||||||||  || |||||||||||||| ||| || || |||||||||||||||||||||||    
T  25611812 gatgtgttgctagataccgctcattgtttataatattaaatgtaagatttaatattattgccaacgtgactagaacctatagggtcacacacaa 25611905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 6094815 - 6094914
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||| ||||||||||||||||||||||    
T  6094815 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacaggaacctatagggtcacacacaa 6094914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 22130295 - 22130202
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||||||||||||||  | |||||||||||||| ||| || || |||||||| ||||||||||||||    
T  22130295 gatgtgttgctagataccgctcattgtttataatattaaatattagatttaatattattgccaacgtgactagaacctaaagggtcacacacaa 22130202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 28548745 - 28548838
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||||||||||||||||||||  ||||||||||||||||||  |||||||||||||||||||| | |||  |||||||| |||||||||||||    
T  28548745 gatgtgttgctagataccgctcactgtttataatattaaatacgaaatttaatattattgtcaacgctacgggaacctattgggtcacacacaa 28548838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 19 - 150
Target Start/End: Original strand, 18835963 - 18836094
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaatataac 118  Q
    |||||||||||||||||   || |||||||||||||||||||  |||||||||||||||| ||| ||  | |||||| |||||||||||||||| | |||    
T  18835963 gatgtgttgctagatactagtcattgtttataatattaaatattaaatttaatattattgccaacgtggctagaaccaatagggtcacacacaaaagaac 18836062  T
Q  119 gt-tcaaaaggagaaatataagtaagacttata 150  Q
    || |||||| |||||||||||||||| ||||||    
T  18836063 gtgtcaaaa-gagaaatataagtaaggcttata 18836094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 185
Target Start/End: Complemental strand, 22659179 - 22659014
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaatataac 118  Q
    |||||||||||||||||||||| ||||||||| |||||||||  | |||||||||||||| ||| || |  ||||||||||||||||||||||| | |||    
T  22659179 gatgtgttgctagataccgctcattgtttatagtattaaatattagatttaatattattgccaacgtgattagaacctatagggtcacacacaa-agaac 22659081  T
Q  119 gttcaaaag-gagaaatataagtaagacttataacttgggttgtatttagcaaataacgctaattagt 185  Q
    | ||||||| || | ||||||||| |||||| ||   ||| ||  ||||| |||||||||||||||||    
T  22659080 ggtcaaaagagaaatatataagtatgactta-aataaggggtgcgtttagtaaataacgctaattagt 22659014  T

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Target: chr8; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 6431504 - 6431597
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| ||||||||| |||||||||  | |||||||||||||| ||| || || ||||||||||||| |||||||||    
T  6431504 gatgtgttgctagataccgctcattgtttatagtattaaatattagatttaatattattgccaacgtgactagaacctatagggccacacacaa 6431597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 15326890 - 15326989
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  |||| |||||||||||||||||    
T  15326890 agcagtgatgtgttgctagataccgctcactgtttataatattaaatacgtgatttaatattattgccaacgttacgggaacatatagggtcacacacaa 15326989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 15507259 - 15507358
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  |||| |||||||||||||||||    
T  15507259 agcagtgatgtgttgctagataccgctcactgtttataatattaaatacgtgatttaatattattgccaacgttacgggaacatatagggtcacacacaa 15507358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 21 - 112
Target Start/End: Original strand, 21969952 - 21970043
Alignment:
Q  21 tgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||||||||||||||||||  ||||||||||||||||||  | |||||||||||||| ||| || || |||||||| ||||||||||||||    
T  21969952 tgtgttgctagataccgctcaatgtttataatattaaatatcagatttaatattattgccaacgtgactagaacctaaagggtcacacacaa 21970043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 27007203 - 27007110
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||| ||||||||||  | ||||||||| |||| ||| || || |||||||| ||||||||||||||    
T  27007203 gatgtgttgctagataccgctcattgtttatgatattaaatattagatttaatatcattgccaacgtgactagaacctaaagggtcacacacaa 27007110  T

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Target: chr8; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 27014346 - 27014253
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||| ||||||||||  | ||||||||| |||| ||| || || |||||||| ||||||||||||||    
T  27014346 gatgtgttgctagataccgctcattgtttatgatattaaatattagatttaatatcattgccaacgtgactagaacctaaagggtcacacacaa 27014253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 21917292 - 21917385
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||| ||||||| |||||||| |||||||||||   ||||||||| |||| ||| || || |||||||| ||||||||||||||    
T  21917292 gatgtgttgctagacaccgctcattgtttatgatattaaataatggatttaatatcattgccaacgtgactagaacctaaagggtcacacacaa 21917385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 27880173 - 27880080
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||| ||||||||| |   ||||||||| |||| ||| || || |||||||| ||||||||||||||    
T  27880173 gatgtgttgctagataccgctcattgtttatgatattaaatgatggatttaatatcattgccaacgtgactagaacctaaagggtcacacacaa 27880080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 28020354 - 28020261
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||| ||||||||| |   ||||||||| |||| ||| || || |||||||| ||||||||||||||    
T  28020354 gatgtgttgctagataccgctcattgtttatgatattaaatgatggatttaatatcattgccaacgtgactagaacctaaagggtcacacacaa 28020261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 32872365 - 32872281
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaaccta 97  Q
    ||||| ||||||||| ||||||||  | | | |||||||||||||||| || ||||||||||||||||||| |||||||||||||    
T  32872365 agcagtgatgtgttgttagatacctattgctctttataatattaaatacaagatttaatattattgtcaattttacaagaaccta 32872281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 14978983 - 14978901
Alignment:
Q  28 ctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||  ||||||||||||||||  | |  |||||||||||||||||||||||||||||||| | | ||||||||||    
T  14978983 ctagataccgctcactgtttataatattaaacgaga--tttaatattattgtcaatgttacaagaacctacaagatcacacacaa 14978901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 45533959 - 45533866
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| ||||||||  ||||| |||  | ||||||||| |||| ||| || || |||||||| ||||||||||||||    
T  45533959 gatgtgttgctagataccgctcattgtttatggtattagatattagatttaatatcattgccaacgtgactagaacctaaagggtcacacacaa 45533866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 8967795 - 8967747
Alignment:
Q  45 tttataatattaaataaaaaatttaatattattgtcaatgttacaagaa 93  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  8967795 tttataatattaaatataaaatttaatattattgtcaatgttacgagaa 8967747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 24643345 - 24643438
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||||||||||||||||| |   |||||||| |||||||||    |||||||||||||||||| |||||  || |||||||||||||| ||||    
T  24643345 gatgtgttgctagataccgtttactgtttatagtattaaatatgtgatttaatattattgtcaacgttacgggagcctatagggtcacaaacaa 24643438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 145
Target Start/End: Complemental strand, 37031941 - 37031842
Alignment:
Q  48 ataatattaaataaaaaatttaatattattgtcaatgttacaagaacc--tatagggtcacacacaatataacgttcaaaaggagaaatataagtaagac 145  Q
    ||||||||||||| |||||||||| |||||| |||  |||||||||||  |||| ||||| |||||||| |||  ||| ||  |||||||||||||||||    
T  37031941 ataatattaaatataaaatttaattttattgccaacattacaagaacctatatatggtcatacacaatagaacagtcagaattagaaatataagtaagac 37031842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 2962616 - 2962526
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacaca 109  Q
    ||||||||| ||||||| |||| || |||||| || ||||||  | |||||||||||||  ||| || || ||||||||||||||||||||    
T  2962616 gatgtgttgttagatactgctcattatttatagtaataaatattagatttaatattattaccaacgtgactagaacctatagggtcacaca 2962526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 24796514 - 24796421
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||||| |||||||| |||||  | ||||||||||||||||    |||||||| ||||||||| |||||  |||||||||| || ||||||||    
T  24796514 gatgtgtggctagatatcgctcactatttataatattaaatatgtgatttaataatattgtcaacgttaccggaacctatagagttacacacaa 24796421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 2e-45; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 185
Target Start/End: Complemental strand, 15168985 - 15168813
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||| ||||||||||| | ||  |||||||||||||||||| || |||||||||||||| ||| ||||||||| |||||||||||||||||||    
T  15168985 agcagtgatgtattgctagatactgatcactgtttataatattaaatataagatttaatattattgccaacgttacaagagcctatagggtcacacacaa 15168886  T
Q  113 tataacgttcaaaaggagaaatataagtaagacttataacttgggttgtatttagcaaataacgctaattagt 185  Q
    || |||| |||||| |||||||||||||||||||||||||||||| || | ||||||||| |  |||||||||    
T  15168885 tagaacggtcaaaaagagaaatataagtaagacttataacttggggtgaaattagcaaatgaaactaattagt 15168813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 13 - 185
Target Start/End: Complemental strand, 24443068 - 24442897
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||| ||| ||||||||||||  |||||||||||||||||| || |||||||||||||| ||| || ||||||||||||||||||||| ||||    
T  24443068 agcagtgatgtcttgttagataccgctcactgtttataatattaaatataagatttaatattattgccaacgtgacaagaacctatagggtcacaaacaa 24442969  T
Q  113 tataacgttcaaaaggagaaatataagtaagacttataacttgggttgtatttagcaaataacgctaattagt 185  Q
     | |||| |||||||||||||||||||||||||||||||  |||| ||  ||||| |||||||||||||||||    
T  24442968 aagaacggtcaaaaggagaaatataagtaagacttataatatggg-tgcgtttagaaaataacgctaattagt 24442897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 13 - 185
Target Start/End: Complemental strand, 25845214 - 25845041
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgtt-gtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacaca 111  Q
    ||||| ||||||||||||||| | |||| || |||| |||||||||||| || ||||||||||| || ||||||||||||||||||||| ||||||||||    
T  25845214 agcagtgatgtgttgctagatgctgctcattagtttctaatattaaatataagatttaatattaatgccaatgttacaagaacctatagtgtcacacaca 25845115  T
Q  112 atataacgttcaaaaggagaaatataagtaagacttataacttgggttgtatttagcaaataacgctaattagt 185  Q
    ||| |||| ||||||| |||||| ||||||||||||||||  |||| || ||||||||||| ||| ||||||||    
T  25845114 atagaacgatcaaaagcagaaatttaagtaagacttataagatggggtgcatttagcaaatgacgttaattagt 25845041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 19 - 185
Target Start/End: Complemental strand, 18257250 - 18257087
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaatataac 118  Q
    |||||||||||||||||||||| ||||||||||||||||||| |  |||||||||||||||||| || ||  |||||||| ||||||||||||| | |||    
T  18257250 gatgtgttgctagataccgctcattgtttataatattaaatataggatttaatattattgtcaacgtgacttgaacctatggggtcacacacaa-agaac 18257152  T
Q  119 gttcaaaaggagaaatataagtaagacttataacttgggttgtatttagcaaataacgctaattagt 185  Q
      || ||||||||||||||| |||||||||||   |||| || |||||| |||||||| ||||||||    
T  18257151 agtc-aaaggagaaatataactaagacttatatgatggg-tgcatttagtaaataacgttaattagt 18257087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 23 - 185
Target Start/End: Complemental strand, 31190052 - 31189892
Alignment:
Q  23 tgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaatataacgttc 122  Q
    ||||||| |||||||||| |||||||||||||||||||  | ||| |||||||||||||| || || ||||||||| ||||||||||||| | |||| ||    
T  31190052 tgttgctggataccgctcattgtttataatattaaatattatattaaatattattgtcaacgtgactagaacctatggggtcacacacaaaagaacggtc 31189953  T
Q  123 aaaaggagaaatataagtaagacttataacttgggttgtatttagcaaataacgctaattagt 185  Q
     ||| |||||||| ||||||||||||||   |||| ||  |||||||||||||||||||||||    
T  31189952 taaa-gagaaatacaagtaagacttatatgatggg-tgcgtttagcaaataacgctaattagt 31189892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 19 - 185
Target Start/End: Original strand, 8465616 - 8465781
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaatataac 118  Q
    |||||||||||||||||||||| |||||||||||||||||||  | |||||||||||||| ||| || || ||||||||||||||||||||||| | |||    
T  8465616 gatgtgttgctagataccgctcattgtttataatattaaatatcagatttaatattattgccaacgtgaccagaacctatagggtcacacacaa-agaac 8465714  T
Q  119 gttcaaaag-gagaaatataagtaagacttataacttgggttgtatttagcaaataacgctaattagt 185  Q
      ||||||| || | ||||||||| ||||||| |   ||| ||||||||| |||||| ||||||||||    
T  8465715 agtcaaaagagaaatatataagtacgacttat-ataaggggtgtatttagtaaataaagctaattagt 8465781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 19 - 170
Target Start/End: Original strand, 12410114 - 12410263
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaatataac 118  Q
    |||| |||||||||||||||||  ||||| |||||||||||| || |||||||||||||  | | ||||||||||| ||||||||||||||||||| |||    
T  12410114 gatgagttgctagataccgctcactgtttgtaatattaaatataagatttaatattatttcccacgttacaagaacttatagggtcacacacaatagaac 12410213  T
Q  119 gttcaaaaggagaaatataagtaagacttataacttgggttgtatttagcaa 170  Q
    | || |||| | | ||||||||||||||| ||||||||| || | |||||||    
T  12410214 ggtc-aaagaatacatataagtaagactt-taacttggggtgcaattagcaa 12410263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 18561690 - 18561789
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||||||| |||||  ||||||||||||||||||||||    
T  18561690 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgtcaacgttacgggaacctatagggtcacacacaa 18561789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 29328476 - 29328575
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||||||| |||||  ||||||||||||||||||||||    
T  29328476 agcagcgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgtcaacgttacgggaacctatagggtcacacacaa 29328575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 18400720 - 18400813
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||||||||||||||  | |||||||||||||| ||| || || |||||||| ||||||||||||||    
T  18400720 gatgtgttgctagataccgctcattgtttataatattaaatattagatttaatattattgccaacgtgactagaacctaaagggtcacacacaa 18400813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 18407704 - 18407797
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||||||||||||||  | |||||||||||||| ||| || || |||||||| ||||||||||||||    
T  18407704 gatgtgttgctagataccgctcattgtttataatattaaatattagatttaatattattgccaacgtgactagaacctaaagggtcacacacaa 18407797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 24851068 - 24850975
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||||||| |||||  ||||||||||||||||||||||    
T  24851068 gatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgtcaacgttacgggaacctatagggtcacacacaa 24850975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 41680649 - 41680560
Alignment:
Q  23 tgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||| |||||||||||||||||||  | |||||||||||||| ||| || || |||||||||||||||||||||||    
T  41680649 tgttgctagataccgctcattgtttataatattaaatattagatttaatattattgccaacgtgactagaacctatagggtcacacacaa 41680560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 19 - 185
Target Start/End: Complemental strand, 47166544 - 47166380
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaatataac 118  Q
    ||||||||||||||||| |||| |||||||||||||||||||  | |||||||||||||| |||  | || ||||||||||||||||||||||| | |||    
T  47166544 gatgtgttgctagatactgctcattgtttataatattaaatattagatttaatattattgccaacatgactagaacctatagggtcacacacaa-agaac 47166446  T
Q  119 gttcaaaag-gagaaatataagtaagacttataacttgggttgtatttagcaaataacgctaattagt 185  Q
      ||||||| || | ||||||||| ||||||||  |  || ||| ||||| |||||||||||||||||    
T  47166445 aatcaaaagagaaatatataagtatgacttata--taagggtgtgtttagtaaataacgctaattagt 47166380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 11535577 - 11535478
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  11535577 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 11535478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 11542495 - 11542396
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  11542495 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 11542396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 15153135 - 15153234
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  15153135 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgtgaacctatagggtcacacacaa 15153234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 19231499 - 19231598
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||| ||||||||||||||||||| ||| ||||||||| |||||||||  | |||||||||||||| ||| || || |||||||||||||||||||||||    
T  19231499 agcaaagatgtgttgctagataccactcattgtttatattattaaatattagatttaatattattgccaacgtgactagaacctatagggtcacacacaa 19231598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 43 - 157
Target Start/End: Original strand, 19389202 - 19389316
Alignment:
Q  43 tgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaatataacgttcaaaaggagaaatataagtaa 142  Q
    |||||||||||||||||| || |||||||||||||   |||||||  ||||| ||||||||| ||||||||| |||  | |||||||||||||||| |||    
T  19389202 tgtttataatattaaatataagatttaatattatttctaatgttaatagaacttatagggtcgcacacaatagaacaattaaaaggagaaatataattaa 19389301  T
Q  143 gacttataacttggg 157  Q
    |||||||||| ||||    
T  19389302 gacttataacatggg 19389316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 18258808 - 18258715
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| ||||||||| |||||||||  | |||||||||||||||||| || || | || ||||||||||||||||||    
T  18258808 gatgtgttgctagataccgctcattgtttatagtattaaatattagatttaatattattgtcaacgtgactaaaatctatagggtcacacacaa 18258715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 170
Target Start/End: Original strand, 12393246 - 12393395
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaatataac 118  Q
    |||||||||||||||| | |||  ||||| |||||||||||| || |||||||||||||  | |  ||||||||||||||||| |||||||||||| |||    
T  12393246 gatgtgttgctagatatctctcactgtttgtaatattaaatataagatttaatattatttcccacattacaagaacctataggttcacacacaataaaac 12393345  T
Q  119 gttcaaaaggagaaatataagtaagacttataacttgggttgtatttagcaa 170  Q
    | |  |||||| ||||| ||||||||||| ||||||||| || | |||||||    
T  12393346 ggt-taaaggataaatagaagtaagactt-taacttggggtgcaattagcaa 12393395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 150
Target Start/End: Complemental strand, 19393111 - 19392982
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaatataac 118  Q
    |||||||||||||||||| ||| || |||||| |||||||||  | |||||||||||||  |||  | || ||||||||||||||||||||||| | |||    
T  19393111 gatgtgttgctagatacccctcatt-tttatagtattaaatattagatttaatattatttccaacatgactagaacctatagggtcacacacaaaagaac 19393013  T
Q  119 gttcaaaaggagaaatataagtaagacttata 150  Q
    | |||||| |||||||||||||| ||||||||    
T  19393012 gatcaaaa-gagaaatataagtatgacttata 19392982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 30254754 - 30254847
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| ||||||||| |||||||||  | ||||||||| |||| ||| || || |||||||| ||||||||||||||    
T  30254754 gatgtgttgctagataccgctcattgtttatagtattaaatattagatttaatatcattgccaacgtgactagaacctaaagggtcacacacaa 30254847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 34129191 - 34129284
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| ||| ||||| |||||||||  | |||||||||||||| ||| || || |||| ||||||||||||||||||    
T  34129191 gatgtgttgctagataccgctcattggttatattattaaatattagatttaatattattgccaacgtgactagaatctatagggtcacacacaa 34129284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 48808182 - 48808089
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||| ||||||||||  | ||||||||| |||| ||| || || |||||||| ||||||||||||||    
T  48808182 gatgtgttgctagataccgctcattgtttatgatattaaatattagatttaatatcattgccaacgtgactagaacctaaagggtcacacacaa 48808089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 12739226 - 12739325
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||| ||| ||||||||||||    
T  12739226 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaaccgataaggtcacacacaa 12739325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 13392847 - 13392940
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||| |||  ||||||||||||||||||    |||||||||| ||||||| |||||  ||||||||| ||||||||||||    
T  13392847 gatgtgttgctagataccactcactgtttataatattaaatatgtgatttaatatttttgtcaacgttacgggaacctatatggtcacacacaa 13392940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 18139024 - 18138931
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| ||||||||  |||||||||  | ||||||||| |||| ||| || || |||||||| ||||||||||||||    
T  18139024 gatgtgttgctagataccgctcattgtttatggtattaaatattagatttaatatcattgccaacgtgactagaacctaaagggtcacacacaa 18138931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 2205168 - 2205261
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||| ||||||||||||||| |||||||| ||||||||| |   ||||||||| |||| ||| || || |||||||| ||||||||||||||    
T  2205168 gatgtgctgctagataccgctcattgtttatgatattaaatgatggatttaatatcattgccaacgtgactagaacctaaagggtcacacacaa 2205261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 15730367 - 15730460
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| ||||||||  ||||| |||  | ||||||||| |||| ||| || || |||||||| ||||||||||||||    
T  15730367 gatgtgttgctagataccgctcattgtttatggtattagatattagatttaatatcattgccaacgtgactagaacctaaagggtcacacacaa 15730460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 12751518 - 12751617
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  || |||||||||||||||    ||||||||||| |  ||| |||||  |||||||||||||||| |||||    
T  12751518 agcagtgatgtgttgctagataccgctcactgcttataatattaaatatgtgatttaatattaataccaacgttacgggaacctatagggtcacccacaa 12751617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 112
Target Start/End: Original strand, 28131180 - 28131272
Alignment:
Q  20 atgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||| | |||||||||||| ||||||||  |||||||||  | |||||||||||||| ||| || || | ||||||||| |||||||||||    
T  28131180 atgtgtcgttagataccgctcattgtttattctattaaatattagatttaatattattgccaacgtgactataacctatagagtcacacacaa 28131272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 111
Target Start/End: Original strand, 39112495 - 39112586
Alignment:
Q  20 atgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacaca 111  Q
    ||||||||||||||||| |   || |||||||||||||||| || || || ||| ||||||||  |||||||||||||||  ||||||||||    
T  39112495 atgtgttgctagataccacctattctttataatattaaatataagatgtagtatcattgtcaacattacaagaacctatatagtcacacaca 39112586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 10666716 - 10666656
Alignment:
Q  52 tattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||  | ||||||||||||| |||| || || |||||||||||||||||||||||    
T  10666716 tattaaatattagatttaatattattttcaacgtgactagaacctatagggtcacacacaa 10666656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 14592514 - 14592576
Alignment:
Q  23 tgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgt 85  Q
    |||| ||| |||| |||| |||||||||||||||||||  | |||||||||||||| ||||||    
T  14592514 tgttactaaatactgctcattgtttataatattaaatattagatttaatattattgccaatgt 14592576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 2635072 - 2635040
Alignment:
Q  54 ttaaataaaaaatttaatattattgtcaatgtt 86  Q
    ||||||||| |||||||||||||||||||||||    
T  2635072 ttaaataaataatttaatattattgtcaatgtt 2635040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 11557502 - 11557458
Alignment:
Q  65 atttaatattattgtcaatgttacaagaacctatagggtcacaca 109  Q
    |||||||||||||| ||| |||||  |||||||||||||||||||    
T  11557502 atttaatattattgccaacgttacgggaacctatagggtcacaca 11557458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 2e-42; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 181
Target Start/End: Original strand, 26816909 - 26817071
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaatataac 118  Q
    |||||||||||||||||||||| ||||||||||||||||||| || |||||||||| ||||||| ||  ||||||| ||||||||||||| ||||| |||    
T  26816909 gatgtgttgctagataccgctcattgtttataatattaaatataagatttaatattgttgtcaacgtggcaagaacttatagggtcacacgcaatagaac 26817008  T
Q  119 gttcaaaaggag-aaatataagtaagacttataacttgggttgtatttagcaaataacgctaat 181  Q
    |||||||||||| |||||||||||||||||||||  |||| ||  |||||||||||||| ||||    
T  26817009 gttcaaaaggagaaaatataagtaagacttataagatggg-tgcgtttagcaaataacgttaat 26817071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 19 - 146
Target Start/End: Original strand, 15538153 - 15538280
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaatataac 118  Q
    ||||||||||||||||||||||  | ||||||||||| |||| || |||||||||||||| ||||||  |||||| |||||||||||||||||| | |||    
T  15538153 gatgtgttgctagataccgctcactttttataatattgaatataagatttaatattattgccaatgtggcaagaaactatagggtcacacacaaaagaac 15538252  T
Q  119 gttcaaaaggagaaatataagtaagact 146  Q
    | ||||||||||||||||||||||||||    
T  15538253 gatcaaaaggagaaatataagtaagact 15538280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 21034855 - 21034948
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||||||||||||||  | |||||||||||||| ||| || || |||||||||||||||||||||||    
T  21034855 gatgtgttgctagataccgctcattgtttataatattaaatatcagatttaatattattgccaacgtgactagaacctatagggtcacacacaa 21034948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 21399409 - 21399502
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||||||||||||||  | |||||||||||||| ||| || || |||||||||||||||||||||||    
T  21399409 gatgtgttgctagataccgctcattgtttataatattaaatatcagatttaatattattgccaacgtgactagaacctatagggtcacacacaa 21399502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 19 - 150
Target Start/End: Original strand, 14147637 - 14147767
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaatataac 118  Q
    |||||| |||||||||  |||| |||||||||||||||||||  |||||||||||||||||||| || || ||||| ||||||||||  ||||| | |||    
T  14147637 gatgtgatgctagatattgctcattgtttataatattaaatattaaatttaatattattgtcaacgtgactagaacatatagggtcaatcacaaaagaac 14147736  T
Q  119 gttcaaaaggagaaatataagtaagacttata 150  Q
    | |||||| |||||||||||||||||| ||||    
T  14147737 gatcaaaa-gagaaatataagtaagacatata 14147767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 15846221 - 15846128
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||||||||||||||  | |||||||||||||| |||  | || |||||||||||||||||||||||    
T  15846221 gatgtgttgctagataccgctcattgtttataatattaaatatcagatttaatattattgccaacatgactagaacctatagggtcacacacaa 15846128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 25978412 - 25978319
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| ||||||||| |||||||||  | |||||||||||||| ||| || || |||||||||||||||||||||||    
T  25978412 gatgtgttgctagataccgctcattgtttatagtattaaatattagatttaatattattgccaacgtgactagaacctatagggtcacacacaa 25978319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 6110756 - 6110855
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  6110756 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 6110855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 8491187 - 8491286
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  8491187 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 8491286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 10572107 - 10572008
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  10572107 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 10572008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 10578871 - 10578772
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  10578871 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 10578772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 15600399 - 15600300
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  15600399 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 15600300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 15606944 - 15606845
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  15606944 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 15606845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 15316860 - 15316767
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| || |||||| |||||||||  | |||||||||||||| ||| || || |||||||||||||||||||||||    
T  15316860 gatgtgttgctagataccgctcattatttatagtattaaatattagatttaatattattgccaacgtgactagaacctatagggtcacacacaa 15316767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 13211994 - 13212093
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    || ||||||||||| ||| |||||  ||||||||||||||||||||||    
T  13211994 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatgtaatattattgccaacgttacgggaacctatagggtcacacacaa 13212093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 16481998 - 16481899
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||| ||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  16481998 agcagtgatgtgttgcttgataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 16481899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 17137045 - 17137144
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  |||||||||||||||||     |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  17137045 agcagtgatgtgttgctagataccgctcactgtttataatattaaatgtgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 17137144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 17197270 - 17197171
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| |||||||||||||||||| |||  | ||||||||||||||||    |||||||||||||||||| ||||| ||||| |||||||||||||||||    
T  17197270 agcagtgatgtgttgctagataccactcactttttataatattaaatatgtgatttaatattattgtcaacgttacgagaacatatagggtcacacacaa 17197171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 17780633 - 17780534
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||  ||| |||||  ||||||||||||||||||||||    
T  17780633 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattatttccaacgttacgggaacctatagggtcacacacaa 17780534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 23014875 - 23014776
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||| ||||||||||||||    |||||||||||||| ||| ||||| |||||||||||||||||| ||||    
T  23014875 agcagtgatgtgttgctagataccgctcactgtctataatattaaatacgtgatttaatattattgccaacgttacgagaacctatagggtcacatacaa 23014776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 13517499 - 13517598
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| |||||||||||||||||| |||  ||||||||||||||||||    |||||||||||||| |||  ||||  ||||||||||||||||||||||    
T  13517499 agcagtgatgtgttgctagataccactcactgtttataatattaaatatgtgatttaatattattgccaacattacgggaacctatagggtcacacacaa 13517598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 15357101 - 15357002
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||| ||||||    ||||| |||||||| ||| |||||  ||||||||||||||||||||||    
T  15357101 agcagtgatgtgttgctagataccgctcactgtttataatactaaatatgtgatttattattattgccaacgttacgggaacctatagggtcacacacaa 15357002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 12300526 - 12300619
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| ||||||||  |||||||||  | ||||||||| |||| ||| || || |||||||| ||||||||||||||    
T  12300526 gatgtgttgctagataccgctcattgtttatggtattaaatattagatttaatatcattgccaacgtgactagaacctaaagggtcacacacaa 12300619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 20147240 - 20147147
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||| ||||||||| |   ||||||||| |||| ||| || || |||||||| ||||||||||||||    
T  20147240 gatgtgttgctagataccgctcattgtttatgatattaaatgatggatttaatatcattgccaacgtgactagaacctaaagggtcacacacaa 20147147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 15341734 - 15341635
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| |||||| |||||||||||||||  ||||||||||| ||||||    ||||| |||||||| ||| |||||  ||||||||||||||||||||||    
T  15341734 agcagcgatgtggtgctagataccgctcactgtttataatactaaatatgtgatttattattattgccaacgttacgggaacctatagggtcacacacaa 15341635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 1647028 - 1646939
Alignment:
Q  21 tgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacac 110  Q
    ||||||||||||||  ||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||    
T  1647028 tgtgttgctagataatgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagggtcacacac 1646939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 28088723 - 28088816
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||   | ||||||  ||||||||  | |||||||||||||| ||| || || |||||||||||||||||||||||    
T  28088723 gatgtgttgctagataccgcttactatttatagcattaaatattagatttaatattattgccaacgtgactagaacctatagggtcacacacaa 28088816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 55427637 - 55427730
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| ||||||||  ||||| |||  | ||||||||| |||| ||| || || |||||||| ||||||||||||||    
T  55427637 gatgtgttgctagataccgctcattgtttatggtattagatattagatttaatatcattgccaacgtgactagaacctaaagggtcacacacaa 55427730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 18520667 - 18520711
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaa 57  Q
    ||||| ||||||||||||||||||||||  |||||||||||||||    
T  18520667 agcagtgatgtgttgctagataccgctccctgtttataatattaa 18520711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 11788206 - 11788246
Alignment:
Q  20 atgtgttgctagataccgctcgttgtttataatattaaata 60  Q
    ||||||||||||||| ||||| ||||||||| |||||||||    
T  11788206 atgtgttgctagatatcgctcattgtttatagtattaaata 11788246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 35199126 - 35199074
Alignment:
Q  47 tataatattaaataaaaaatttaatattattgtcaatgttacaagaacctata 99  Q
    |||||||||||||| |  |||||||||||||| ||| ||||||||||| ||||    
T  35199126 tataatattaaatatatgatttaatattattgccaacgttacaagaacatata 35199074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 7e-42; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 13 - 151
Target Start/End: Original strand, 29801083 - 29801221
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| |||||||||||||||||| |||  |||||||||||||||||| || |||||||||||||| ||| || ||||||||||||| | ||||||||||    
T  29801083 agcagtgatgtgttgctagataccactcactgtttataatattaaatataagatttaatattattgccaacgtgacaagaacctatatgatcacacacaa 29801182  T
Q  113 tataacgttcaaaaggagaaatataagtaagacttataa 151  Q
    || |||| |||||||||||||||||||||||||||||||    
T  29801183 tagaacggtcaaaaggagaaatataagtaagacttataa 29801221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 13 - 185
Target Start/End: Complemental strand, 20687105 - 20686941
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| || ||||||||||||| |||||  |||||||| ||||||||| || ||||||||||         ||||||||||| ||| |||||||||||||    
T  20687105 agcagtgaggtgttgctagatatcgctcactgtttatagtattaaatataagatttaatattc--------gttacaagaacatattgggtcacacacaa 20687014  T
Q  113 tataacgttcaaaaggagaaatataagtaagacttataacttgggttgtatttagcaaataacgctaattagt 185  Q
    || |||| ||||||||||||||||||||||||||||||||||||| ||  |||||||||||||| | ||||||    
T  20687013 tagaacggtcaaaaggagaaatataagtaagacttataacttggggtgcgtttagcaaataacgtttattagt 20686941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 19 - 185
Target Start/End: Complemental strand, 24763356 - 24763192
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaatataac 118  Q
    ||||||||||||||||| |||| |||||||||||||||||||  | |||||||||||||| ||| || || ||||||||  ||||||||||||| | |||    
T  24763356 gatgtgttgctagatacggctcattgtttataatattaaatattagatttaatattattgccaacgtgactagaacctaaggggtcacacacaaaagaac 24763257  T
Q  119 gttcaaaaggagaaatataagtaagacttataacttgggttgtatttagcaaataacgctaattagt 185  Q
    |    ||| |||||||||||||||||||||||   |||| ||||||||| |||||||||||||||||    
T  24763256 gggtgaaa-gagaaatataagtaagacttatatgatggg-tgtatttagtaaataacgctaattagt 24763192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 24249718 - 24249625
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||||||||||||||  | |||||||||||||| ||| || || |||||||| ||||||||||||||    
T  24249718 gatgtgttgctagataccgctcattgtttataatattaaatattagatttaatattattgccaacgtgactagaacctaaagggtcacacacaa 24249625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 30174993 - 30175086
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||||||||||||||  | |||||||||||||| ||| || || |||||||| ||||||||||||||    
T  30174993 gatgtgttgctagataccgctcattgtttataatattaaatattagatttaatattattgccaacgtgactagaacctaaagggtcacacacaa 30175086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 21329763 - 21329664
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  21329763 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 21329664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 13 - 109
Target Start/End: Original strand, 41661964 - 41662060
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacaca 109  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||||||| |||||  ||||||||||| |||||||    
T  41661964 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgtcaacgttacgggaacctataggatcacaca 41662060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 22791367 - 22791274
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||||||||||||||| ||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  22791367 gatgtgttgctagatactgctcactgtttataatattaaatatgtgatttaatattattgccaaagttacgggaacctatagggtcacacacaa 22791274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 36270857 - 36270950
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||| |||||  | ||||||||||||||||   |||||||||||||||||||  |||| |||||||| | ||||||||||||    
T  36270857 gatgtgttgctagatatcgctcactatttataatattaaatatgtaatttaatattattgtcaacattacgagaacctacatggtcacacacaa 36270950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 150
Target Start/End: Original strand, 19617053 - 19617181
Alignment:
Q  20 atgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaatataacg 119  Q
    ||||||||||||||||||||  ||||||||||||||||||   |  ||||||||||||| |||  | || |||||||||  |||||||||||| | ||||    
T  19617053 atgtgttgctagataccgcttattgtttataatattaaat-ttagttttaatattattgccaacatgactagaacctatgtggtcacacacaaaagaacg 19617151  T
Q  120 ttcaaaaggagaaatataagtaagacttata 150  Q
     | |||| |||||||||||||| ||||||||    
T  19617152 gt-aaaaagagaaatataagtatgacttata 19617181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 24228899 - 24228806
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||   | ||||||  ||||||||  | |||||||||||||| ||| || || |||||||||||||||||||||||    
T  24228899 gatgtgttgctagataccgcttactatttatagcattaaatattagatttaatattattgccaacgtgactagaacctatagggtcacacacaa 24228806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 15341684 - 15341620
Alignment:
Q  21 tgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgt 85  Q
    ||||||||||||||||||||  | |||||||||||||||| |  |||||||||||||| ||||||    
T  15341684 tgtgttgctagataccgctcactatttataatattaaatatatgatttaatattattgccaatgt 15341620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 18620507 - 18620591
Alignment:
Q  28 ctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||  | ||||||||||||||||    ||||||||||||| | || |||| | ||||||||||||||||||||||    
T  18620507 ctagataccgctcactatttataatattaaatatgtgatttaatattatttttaacgttataggaacctatagggtcacacacaa 18620591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 12298451 - 12298542
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacac 110  Q
    ||||||||| |||||||| ||  |||||||||||||||||||    ||||||||| |||||||| ||||| |||||||| | || |||||||    
T  12298451 gatgtgttgttagataccacttattgtttataatattaaatatgtgatttaatatcattgtcaacgttacgagaacctacaagggcacacac 12298542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 41332826 - 41332899
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaata--ttattgtcaatgttacaa 90  Q
    |||||||||||||||||| |||  | |||||||||| |||||||| ||||||||  ||||||||| ||||||||    
T  41332826 gatgtgttgctagataccactcactatttataatatcaaataaaagatttaatatgttattgtcattgttacaa 41332899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 18797204 - 18797245
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaata 60  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  18797204 gatgtgttgctagataccgctcactgtttataatattaaata 18797245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 18822734 - 18822799
Alignment:
Q  46 ttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacaca 111  Q
    ||||||||||||||| |   ||||||||||||||||||| ||| | |||||||||| |||||||||    
T  18822734 ttataatattaaatatatggtttaatattattgtcaatgatacgaaaacctataggatcacacaca 18822799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 31848073 - 31848165
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacaca 111  Q
    ||||| ||||||||||||||||  |||||||||| ||||||| |  || |||| |||||  |||| |||| |||||||| | |||||||||||    
T  31848073 gatgtattgctagataccgctcactgtttataatgttaaatatattatataatgttattaccaatattacgagaacctacatggtcacacaca 31848165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 40300638 - 40300567
Alignment:
Q  39 tcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacaca 111  Q
    ||||||||||||||||||| || |  ||||||||||||| |||||||||| |||| ||| | |||||||||||    
T  40300638 tcgttgtttataatattaa-tatatgatttaatattattatcaatgttacgagaaactacaaggtcacacaca 40300567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 112
Target Start/End: Complemental strand, 6991560 - 6991510
Alignment:
Q  62 aaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||| |||||||| ||||||||| |||| | ||||||||||||    
T  6991560 aaaatttaatatcattgtcaaagttacaagagcctacatggtcacacacaa 6991510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 15341619 - 15341562
Alignment:
Q  127 ggagaaatataagtaagacttataacttgggttgtatttagcaaataacgctaattagt 185  Q
    |||||| ||||||||||||||||||  |||| ||| ||||||| |||||||||||||||    
T  15341619 ggagaactataagtaagacttataagatggg-tgtgtttagcagataacgctaattagt 15341562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 6991628 - 6991568
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgt 79  Q
    |||||||| |||||||||||||  ||| | |||||||||  | ||||||||||||||||||    
T  6991628 gatgtgtttctagataccgctctctgtatgtaatattaacaataaaatttaatattattgt 6991568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 22183000 - 22182960
Alignment:
Q  20 atgtgttgctagataccgctcgttgtttataatattaaata 60  Q
    ||||||| ||||||||| ||| |||||||||||||||||||    
T  22183000 atgtgttactagatacctctcattgtttataatattaaata 22182960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 6e-39; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 13 - 181
Target Start/End: Complemental strand, 10358745 - 10358577
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||| ||||||||||||||| ||  |||||||||||||||||| || |||||||||||||||||| | ||||||||||||||||||||  |||||    
T  10358745 agcagtgatttgttgctagataccgttcactgtttataatattaaatataatatttaatattattgtcaacgatacaagaacctatagggtcatgcacaa 10358646  T
Q  113 tataacgttcaaaagg-agaaatataagtaagacttataacttgggttgtatttagcaaataacgctaat 181  Q
    || |||| |||||||| |||||||||||||||||||||||  |||| ||  ||||||||||||| |||||    
T  10358645 tagaacggtcaaaaggaagaaatataagtaagacttataagatggg-tgcctttagcaaataacactaat 10358577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 19 - 150
Target Start/End: Complemental strand, 22559880 - 22559750
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaatataac 118  Q
    ||||||||  |||||||||||| |||||||||||||||||||  | |||||||||||||  ||| || || |||||||||||||| |||||||| |||||    
T  22559880 gatgtgtttttagataccgctcattgtttataatattaaatattatatttaatattattaccaacgtgactagaacctatagggttacacacaaaataac 22559781  T
Q  119 gttcaaaaggagaaatataagtaagacttata 150  Q
    | |||||| |||||||||| ||||||||||||    
T  22559780 ggtcaaaa-gagaaatatacgtaagacttata 22559750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 14075097 - 14075190
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| ||||||||| |||||||||  |||||||||||||||| ||| || || |||||||||||||||||||||||    
T  14075097 gatgtgttgctagataccgctcattgtttatagtattaaatattaaatttaatattattgccaacgtgactagaacctatagggtcacacacaa 14075190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 18019514 - 18019421
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||||||||||||||  | |||||||||||||| ||| || || ||||||||| |||||||||||||    
T  18019514 gatgtgttgctagataccgctcattgtttataatattaaatatcagatttaatattattgccaacgtgactagaacctatggggtcacacacaa 18019421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 17690955 - 17690856
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  17690955 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 17690856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 27380767 - 27380668
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  27380767 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 27380668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 27471150 - 27471051
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  27471150 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 27471051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 29309582 - 29309681
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  29309582 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 29309681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 29316541 - 29316640
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  29316541 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 29316640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 16558981 - 16558888
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||||||| |||||  ||||||||| ||||||||||||    
T  16558981 gatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgtcaacgttacgggaacctatatggtcacacacaa 16558888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 11652415 - 11652514
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| |||  ||||  ||||||||||||||||||||||    
T  11652415 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacattacgggaacctatagggtcacacacaa 11652514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 18336346 - 18336445
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| |||||||||||||||||| |||  ||||||||||||||||||    |||||||||||||||||| ||| ||||||||||||||||  |||||||    
T  18336346 agcagtgatgtgttgctagatacctctcactgtttataatattaaatatgtgatttaatattattgtcaacgttccaagaacctatagggttgcacacaa 18336445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 23 - 150
Target Start/End: Complemental strand, 19734925 - 19734799
Alignment:
Q  23 tgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaatataacgttc 122  Q
    |||||||||| ||||||| |||||||||||||||||||  | |||||||||||||| ||| || || | ||| ||| ||||||||||||| | |||  ||    
T  19734925 tgttgctagacaccgctcattgtttataatattaaatactagatttaatattattgccaacgtgactaaaacttatggggtcacacacaaaagaacagtc 19734826  T
Q  123 aaaaggagaaatataagtaagacttata 150  Q
    |||| ||||||||||||||||| |||||    
T  19734825 aaaa-gagaaatataagtaagagttata 19734799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 23 - 150
Target Start/End: Complemental strand, 19735200 - 19735074
Alignment:
Q  23 tgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaatataacgttc 122  Q
    |||||||||| ||||||| |||||||||||||||||||  | |||||||||||||| ||| || || | ||| ||| ||||||||||||| | |||  ||    
T  19735200 tgttgctagacaccgctcattgtttataatattaaatactagatttaatattattgccaacgtgactaaaacttatggggtcacacacaaaagaacagtc 19735101  T
Q  123 aaaaggagaaatataagtaagacttata 150  Q
    |||| ||||||||||||||||| |||||    
T  19735100 aaaa-gagaaatataagtaagagttata 19735074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 150
Target Start/End: Original strand, 21995576 - 21995706
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaatataac 118  Q
    ||||| |||||||||||||||| ||||||||||| |||||||  | |||||||||||||  ||| || || ||||| ||| ||||||||||||| | |||    
T  21995576 gatgtattgctagataccgctcattgtttataattttaaatattagatttaatattatttccaacgtgactagaacatatggggtcacacacaagagaac 21995675  T
Q  119 gttcaaaaggagaaatataagtaagacttata 150  Q
      |||||| ||||||||||| |||||||||||    
T  21995676 agtcaaaa-gagaaatataaataagacttata 21995706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 27297321 - 27297420
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  |||||||||||||||||     |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  27297321 agcagtgatgtgttgctagataccgctcactgtttataatattaaatttgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 27297420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 185
Target Start/End: Original strand, 19219156 - 19219302
Alignment:
Q  36 cgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaatataacgttcaaaaggagaaata 135  Q
    ||||| |||||||||||| ||| ||  | |||||||||||||| ||| || || |||||||||||| ||||||| |||| || | ||||||||| |||||    
T  19219156 cgctcattgtttataatagtaattattatatttaatattattgccaacgtgactagaacctataggatcacacataatagaatggtcaaaaggataaata 19219255  T
Q  136 taagtaagacttataacttgggttgtatttagcaaataacgctaattagt 185  Q
    |||||  |||||||||  |||| ||  |||||||||||||||||||||||    
T  19219256 taagttggacttataa--tggg-tgcgtttagcaaataacgctaattagt 19219302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 27508033 - 27507943
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacaca 109  Q
    |||||||||||||||||||||  |||||||||||||||||||  | |||||||||||||| ||| || || |||||||| |||||||||||    
T  27508033 gatgtgttgctagataccgctaattgtttataatattaaatattagatttaatattattgccaacgtgactagaacctaaagggtcacaca 27507943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 27525247 - 27525157
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacaca 109  Q
    |||||||||||||||||||||  |||||||||||||||||||  | |||||||||||||| ||| || || |||||||| |||||||||||    
T  27525247 gatgtgttgctagataccgctaattgtttataatattaaatattagatttaatattattgccaacgtgactagaacctaaagggtcacaca 27525157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 25536700 - 25536607
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||| |||||||||||||  |||||||| |||||||||    |||||||||||||| |||||||||  ||||||||||||||||||||||    
T  25536700 gatgtgttactagataccgctcactgtttatagtattaaatatgtgatttaatattattgccaatgttactggaacctatagggtcacacacaa 25536607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 17683984 - 17683885
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  |||||||| |||||||||    |||||||||||||| ||| |||||  ||||||||||| ||||||||||    
T  17683984 agcagtgatgtgttgctagataccgctcactgtttatagtattaaatatgtgatttaatattattgccaacgttacgggaacctataggatcacacacaa 17683885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 16789687 - 16789780
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| ||||||||  |||||||||  | ||||||||| |||| ||| || || |||||||| ||||||||||||||    
T  16789687 gatgtgttgctagataccgctcattgtttatggtattaaatattagatttaatatcattgccaacgtgactagaacctaaagggtcacacacaa 16789780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 22859574 - 22859481
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||| ||||||||| |   ||||||||| |||| ||| || || |||||||| ||||||||||||||    
T  22859574 gatgtgttgctagataccgctcattgtttatgatattaaatgatggatttaatatcattgccaacgtgactagaacctaaagggtcacacacaa 22859481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 1585794 - 1585701
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| ||||||||  ||||| |||  | ||||||||| |||| ||| || || |||||||| ||||||||||||||    
T  1585794 gatgtgttgctagataccgctcattgtttatggtattagatattagatttaatatcattgccaacgtgactagaacctaaagggtcacacacaa 1585701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 33317483 - 33317576
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| || |||||| || ||||||  | |||||||||||||  ||| || || |||||||| ||||||||||||||    
T  33317483 gatgtgttgctagataccgctcattatttatagtaataaatattagatttaatattattaccaacgtgactagaacctacagggtcacacacaa 33317576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 28173228 - 28173324
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||| ||||||||||||||  |||| ||||||||||||  | |||||||| |||||||||  |||||||||||||| ||||||| ||||||    
T  28173228 agcagtgatgtgtggctagataccgctcactgttcataatattaaat--ataatttaat-ttattgtcaccgttacaagaacctacagggtcatacacaa 28173324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 28755754 - 28755663
Alignment:
Q  21 tgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||| | |||||||  ||||||||||||||||||   |||||||| |||||||||| ||||| ||||| || ||| ||||||||||    
T  28755754 tgtgttgctatacaccgctcactgtttataatattaaatatgtaatttaatgttattgtcaacgttacgagaacatagaggatcacacacaa 28755663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 8613537 - 8613630
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||||||| |||||| ||||| || |||||| || ||||||  | |||||||||||||  ||| || || |||||||||||||||||||||||    
T  8613537 gatgtgttgttagatatcgctcattatttatagtaataaatattagatttaatattattaccaacgtgactagaacctatagggtcacacacaa 8613630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 42 - 112
Target Start/End: Original strand, 13175017 - 13175087
Alignment:
Q  42 ttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||||||||||||||||| || |||| ||||||||  |||    ||||||||||||||||||||||||||    
T  13175017 ttgtttataatattaaatataatatttcatattatttccaacacgacaagaacctatagggtcacacacaa 13175087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 8510477 - 8510550
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaaga 92  Q
    |||||||| |||||||   ||| |||||||||||||||||   || ||||||||||||| |||| |||||||||    
T  8510477 gatgtgttcctagatattactcattgtttataatattaaaagtaagatttaatattattttcaacgttacaaga 8510550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 1e-37; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 23 - 150
Target Start/End: Original strand, 9538580 - 9538707
Alignment:
Q  23 tgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaatataacgttc 122  Q
    |||||||||||||||||| ||||||||||||||||||| || |||||||||||||| |||  | | |||||| ||||||||||||||||||| |||| ||    
T  9538580 tgttgctagataccgctcattgtttataatattaaatacaagatttaatattattgccaacttgaaaagaacatatagggtcacacacaatagaacgatc 9538679  T
Q  123 aaaaggagaaatataagtaagacttata 150  Q
    |||||||| |||||||||||||||||||    
T  9538680 aaaaggaggaatataagtaagacttata 9538707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 19 - 185
Target Start/End: Original strand, 32637101 - 32637266
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaatataac 118  Q
    |||||||||||||||| ||| | ||||||||||||||||||| || |||||||||||||| |||  | |||||| |||| ||||||||| |||| | |||    
T  32637101 gatgtgttgctagatatcgcccattgtttataatattaaatataagatttaatattattgccaacatgacaagatcctacagggtcacaaacaaaagaac 32637200  T
Q  119 gttcaaaaggagaaatataagtaagacttataacttgggttgtatttagcaaataacgctaattagt 185  Q
    | |||||||||||||||||||||||||| ||||  |||| ||   ||||||||||| ||||||||||    
T  32637201 ggtcaaaaggagaaatataagtaagactaataatatggg-tgcgcttagcaaataatgctaattagt 32637266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 5617007 - 5617127
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| |||||||||||||||||   ||  |||||||||||||||||| || ||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  5617007 agcagtgatgtgttgctagatacaa-tcactgtttataatattaaatataagatttaatattattgtcactgttacaagaacctataaggtcacacacaa 5617105  T
Q  113 tataacgttcaaaaggagaaat 134  Q
    || |||| ||||||||||||||    
T  5617106 tagaacggtcaaaaggagaaat 5617127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 13 - 185
Target Start/End: Original strand, 19373957 - 19374128
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| |||||||||||||||| |||||  | |||||||||||||||| |  ||||||||||||||| || ||  |||||| ||||||||||| ||||||    
T  19373957 agcagtgatgtgttgctagatatcgctcactatttataatattaaatataggatttaatattattgttaacgtggcaagaatctatagggtcatacacaa 19374056  T
Q  113 tataacgttcaaaaggagaaatataagtaagacttataacttgggttgtatttagcaaataacgctaattagt 185  Q
     | |||  |||||||||||||||||| ||||||||||||  |||| ||  ||||||||||| | |||||||||    
T  19374057 aagaacagtcaaaaggagaaatataaataagacttataatatggg-tgcgtttagcaaatatcactaattagt 19374128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 1942307 - 1942400
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| ||||||||| |||||||||  | |||||||||||||||||| || || |||||||||||||||||||||||    
T  1942307 gatgtgttgctagataccgctcattgtttatagtattaaatattagatttaatattattgtcaacgtgactagaacctatagggtcacacacaa 1942400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 28917460 - 28917367
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||||||||||||||  | |||||||||||||| ||| || || |||||||||||||||||||||||    
T  28917460 gatgtgttgctagataccgctcattgtttataatattaaatatcatatttaatattattgccaacgtgactagaacctatagggtcacacacaa 28917367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 26964332 - 26964431
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| |||||||||  ||||||||||||||||||||||    
T  26964332 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaatgttacgggaacctatagggtcacacacaa 26964431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 26971155 - 26971254
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| |||||||||  ||||||||||||||||||||||    
T  26971155 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaatgttacgggaacctatagggtcacacacaa 26971254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 2677629 - 2677722
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||||||||||||||  | |||||||||||||| ||| || || |||||||| ||||||||||||||    
T  2677629 gatgtgttgctagataccgctcattgtttataatattaaatattagatttaatattattgccaacgtgactagaacctaaagggtcacacacaa 2677722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 15462118 - 15462211
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||||||||||||||  | |||||||||||||| ||| || || | |||||||||||||||||||||    
T  15462118 gatgtgttgctagataccgctcattgtttataatattaaatatcagatttaatattattgccaacgtgactaaaacctatagggtcacacacaa 15462211  T

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Target: chr4; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 34976169 - 34976262
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||||||| |||||||||||| |||||||||||||||||||  | |||||||||||||| ||| || || |||||||||||||||||||||||    
T  34976169 gatgtgttgttagataccgctcattgtttataatattaaatattagatttaatattattgccaacgtgactagaacctatagggtcacacacaa 34976262  T

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Target: chr4; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 869289 - 869388
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  869289 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 869388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 5667645 - 5667546
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||| ||||||||  ||||||||||||||||||    ||| |||||||||||||| ||||| |||||||||||||||||||||||    
T  5667645 agcagtgatgtgttgctaggtaccgctcactgtttataatattaaatatgtgattcaatattattgtcaacgttacgagaacctatagggtcacacacaa 5667546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 5714639 - 5714738
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  5714639 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 5714738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 8858859 - 8858958
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  8858859 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 8858958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 10620848 - 10620749
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||| ||||||||  ||||||||||||||||||    |||||||||||||||||| |||||  ||||||||||||||||||||||    
T  10620848 agcagtgatgtgttgctagttaccgctcactgtttataatattaaatatgtgatttaatattattgtcaacgttacgggaacctatagggtcacacacaa 10620749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 18262904 - 18263003
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  18262904 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 18263003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 19926275 - 19926176
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  19926275 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 19926176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 26532229 - 26532323
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaata-aaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||||||||||||||  || |||||||||||||| ||| || || |||||||| ||||||||||||||    
T  26532229 gatgtgttgctagataccgctcattgtttataatattaaatattaagatttaatattattgccaacgtgactagaacctaaagggtcacacacaa 26532323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 5524675 - 5524566
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaatataac 118  Q
    |||||||| |||||||||||||  | |||||||||||||||| || |||||||||||||| |||  ||||||||||||||| || ||||||||||| |||    
T  5524675 gatgtgttactagataccgctcactatttataatattaaatacaagatttaatattattgccaacattacaagaacctataaggacacacacaatagaac 5524576  T
Q  119 gttcaaaagg 128  Q
      ||||||||    
T  5524575 tgtcaaaagg 5524566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 24699764 - 24699671
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||||||||||||||||  || || |||||||||||||||| |||||||| || |||| ||||||||||||||||||| | ||||||||||||    
T  24699764 gatgtgttgctagataccagtcattatttataatattaaatataaaatttattagtattatcaatgttacaagaacctacatggtcacacacaa 24699671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 9488165 - 9488253
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcaca 107  Q
    ||||||||||||||||| |||| |||||||||||||||||||  | |||||||||||||| ||| || || ||||||||||||||||||    
T  9488165 gatgtgttgctagatactgctcattgtttataatattaaatattagatttaatattattgccaacgtgactagaacctatagggtcaca 9488253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 5708011 - 5708110
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||| ||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  5708011 agcagtgatatgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 5708110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 11421628 - 11421734
Alignment:
Q  43 tgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaatataacgttcaaaaggagaaatataagtaa 142  Q
    ||||||||||||||||||  | |||||||||||||| ||| || || ||||||||| ||||||||||||| | || | |||||| |||||||||||||||    
T  11421628 tgtttataatattaaatactagatttaatattattggcaacgtgactagaacctatggggtcacacacaaaagaaaggtcaaaa-gagaaatataagtaa 11421726  T
Q  143 gacttata 150  Q
    ||||||||    
T  11421727 gacttata 11421734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 18269765 - 18269864
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| |||||| |||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  18269765 agcagtgatgtgatgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 18269864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 35224250 - 35224349
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| || || |||||||||| ||||||||||||    
T  35224250 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgtaacgagaacctatatggtcacacacaa 35224349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 55613375 - 55613474
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||| ||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  55613375 agcagtgatgtgttgcttgataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 55613474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 147
Target Start/End: Original strand, 19363021 - 19363154
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  | |||||||| |||||||  | |||||||||||||| ||| ||  | |||| ||||||||||| ||||||    
T  19363021 agcagtgatgtgttgctagataccgctcactatttataatgttaaatattagatttaatattattgccaacgtggctagaatctatagggtcatacacaa 19363120  T
Q  113 tataacgttcaaaaggagaaatataagtaagactt 147  Q
     | |||  |||||| ||||||||||||||||||||    
T  19363121 aagaacaatcaaaa-gagaaatataagtaagactt 19363154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 30040174 - 30040084
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacaca 109  Q
    |||||||||||||||||| ||| ||||||||| |||||||||  | | |||||||||||| |||||| || ||||||||||||||||||||    
T  30040174 gatgtgttgctagataccactcattgtttatagtattaaatattagacttaatattattgccaatgtgactagaacctatagggtcacaca 30040084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 4426124 - 4426031
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||||||| |||||||  ||| |||||||||||||||||||    |||||||||||||| ||| ||||| |||||||||||||||||||||||    
T  4426124 gatgtgttgttagatactactcattgtttataatattaaatatgtgatttaatattattgccaacgttacgagaacctatagggtcacacacaa 4426031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 8845901 - 8845994
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||| |||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  8845901 gatgtgttgctagataccactcactgtttataatattaaatatgttatttaatattattgccaacgttacgggaacctatagggtcacacacaa 8845994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 10627927 - 10627831
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  |||||||||||||||||   |  | ||||||||||||||| |||||  ||||||||||||||||||||||    
T  10627927 agcagtgatgtgttgctagataccgctcactgtttataatattaaat---atgtgtaatattattgtcaacgttacgggaacctatagggtcacacacaa 10627831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 15815637 - 15815730
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||| ||||||||||  | ||||||||| |||| ||| || || |||||||| ||||||||||||||    
T  15815637 gatgtgttgctagataccgctcattgtttatgatattaaatattagatttaatatcattgccaacgtgactagaacctaaagggtcacacacaa 15815730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 28392649 - 28392550
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||| ||  ||||||||||||||||||    |||||||||||||| |||  ||||  ||||||||||||||||||||||    
T  28392649 agcagtgatgtgttgctagataccgttcactgtttataatattaaatatgtgatttaatattattgccaacattacgggaacctatagggtcacacacaa 28392550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 4546680 - 4546773
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| ||||||||| |||||||||  | |||||||||||||  ||| || || |||||||||| || |||||||||    
T  4546680 gatgtgttgctagataccgctcattgtttatagtattaaatattagatttaatattatttccaacgtgactagaacctataaggccacacacaa 4546773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 5871033 - 5871126
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| ||||||||  |||||||||  | ||||||||| |||| ||| || || |||||||| ||||||||||||||    
T  5871033 gatgtgttgctagataccgctcattgtttatggtattaaatattagatttaatatcattgccaacgtgactagaacctaaagggtcacacacaa 5871126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 17299645 - 17299552
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| ||||||||  |||||||||  | ||||||||| |||| ||| || || |||||||| ||||||||||||||    
T  17299645 gatgtgttgctagataccgctcattgtttatggtattaaatattagatttaatatcattgccaacgtgactagaacctaaagggtcacacacaa 17299552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 18110729 - 18110636
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| ||||||||  |||||||||  | ||||||||| |||| ||| || || |||||||| ||||||||||||||    
T  18110729 gatgtgttgctagataccgctcattgtttatggtattaaatattagatttaatatcattgccaacgtgactagaacctaaagggtcacacacaa 18110636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 10677092 - 10676996
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacaca 109  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||||||| |||||   ||| || |||||||||||    
T  10677092 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgtcaacgttacggaaacttagagggtcacaca 10676996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 10890732 - 10890636
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacaca 109  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||||||| |||||   ||| || |||||||||||    
T  10890732 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgtcaacgttacggaaacttagagggtcacaca 10890636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 4675669 - 4675576
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| ||||||||  ||||| |||  | ||||||||| |||| ||| || || |||||||| ||||||||||||||    
T  4675669 gatgtgttgctagataccgctcattgtttatggtattagatattagatttaatatcattgccaacgtgactagaacctaaagggtcacacacaa 4675576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 18163778 - 18163871
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| ||||||||  ||||| |||  | ||||||||| |||| ||| || || |||||||| ||||||||||||||    
T  18163778 gatgtgttgctagataccgctcattgtttatggtattagatattagatttaatatcattgccaacgtgactagaacctaaagggtcacacacaa 18163871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 20244553 - 20244646
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| ||||||||  ||||| |||  | ||||||||| |||| ||| || || |||||||| ||||||||||||||    
T  20244553 gatgtgttgctagataccgctcattgtttatggtattagatattagatttaatatcattgccaacgtgactagaacctaaagggtcacacacaa 20244646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 109
Target Start/End: Original strand, 10689971 - 10690067
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacaca 109  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    ||| |||||||||||||  |||||  |||| || |||||||||||    
T  10689971 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgattaaatattattgtcagcgttacgggaacttacagggtcacaca 10690067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 109
Target Start/End: Original strand, 10903611 - 10903707
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacaca 109  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    ||| |||||||||||||  |||||  |||| || |||||||||||    
T  10903611 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgattaaatattattgtcagcgttacgggaacttacagggtcacaca 10903707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 3368709 - 3368616
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||| ||||||||||||||||| ||||||||  |||||||||  | ||||||||| |||| ||| || || |||||||| ||||| ||||||||    
T  3368709 gatgcgttgctagataccgctcattgtttatggtattaaatattagatttaatatcattgccaacgtgactagaacctaaagggttacacacaa 3368616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 5524372 - 5524308
Alignment:
Q  121 tcaaaaggagaaatataagtaagacttataacttgggttgtatttagcaaataacgctaattagt 185  Q
    |||||||||||||||||||||||||||||||  |||| || |||||||||||   ||||||||||    
T  5524372 tcaaaaggagaaatataagtaagacttataagatgggctgcatttagcaaatgttgctaattagt 5524308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 24701694 - 24701793
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||| |||||||| |||  |||||||||||||||||     |||||||||||||  |||| |||||||||  || | ||||||||||||    
T  24701694 agcagtgatgtgttgttagataccactcactgtttataatattaaatgtttgatttaatattatttccaatattacaagaatttacaaggtcacacacaa 24701793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 65 - 112
Target Start/End: Complemental strand, 47388407 - 47388360
Alignment:
Q  65 atttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||| |||||   |||||||||||||||||||||    
T  47388407 atttaatattattgtcaacgttacggtaacctatagggtcacacacaa 47388360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 30040084 - 30040027
Alignment:
Q  92 aacctatagggtcacacacaatataacgttcaaaaggagaaatataagtaagacttata 150  Q
    ||||||||||||||||||||| | || | |||||| |||||||||||||| ||||||||    
T  30040084 aacctatagggtcacacacaaaagaatggtcaaaa-gagaaatataagtatgacttata 30040027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 99
Target Start/End: Complemental strand, 39423048 - 39423014
Alignment:
Q  65 atttaatattattgtcaatgttacaagaacctata 99  Q
    ||||||||||||| |||||||||||||||||||||    
T  39423048 atttaatattattatcaatgttacaagaacctata 39423014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 3e-28; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 17314496 - 17314397
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| |||||||||||||| ||||||  ||||||||||||||||||| || |||||||||||||||||||| |||||||||||| ||||| ||||||||    
T  17314496 agcagtgatgtgttgctagacaccgcttattgtttataatattaaatataagatttaatattattgtcaatgctacaagaacctacagggttacacacaa 17314397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 19 - 185
Target Start/End: Complemental strand, 25805070 - 25804905
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaatataac 118  Q
    |||||||||||||||||||||| |||||||||||||||||||  | |||||||||||||| ||| || || ||||||||||||||||||||||| | |||    
T  25805070 gatgtgttgctagataccgctcattgtttataatattaaatatcagatttaatattattgccaacgtgaccagaacctatagggtcacacacaa-agaac 25804972  T
Q  119 gttcaaaag-gagaaatataagtaagacttataacttgggttgtatttagcaaataacgctaattagt 185  Q
      ||||||| || | ||||||||| ||||||| |   ||| ||||||||| |||||| ||||||||||    
T  25804971 agtcaaaagagaaatatataagtacgacttat-ataaggggtgtatttagtaaataaagctaattagt 25804905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 19 - 157
Target Start/End: Complemental strand, 31651464 - 31651326
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaatataac 118  Q
    ||||||||| ||||||||||||  | |||||||||||||| | |  |||| ||||||||  ||| ||||||||||||||| |||| |||||||| | |||    
T  31651464 gatgtgttgttagataccgctcactctttataatattaaacataggatttcatattattaccaacgttacaagaacctatggggtgacacacaaaagaac 31651365  T
Q  119 gttcaaaaggagaaatataagtaagacttataacttggg 157  Q
    | | ||||||||| |||||||||||||||||||||||||    
T  31651364 gattaaaaggagagatataagtaagacttataacttggg 31651326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 20941644 - 20941737
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||  ||| || || |||||||||||||||||||||||    
T  20941644 gatgtgttgctagataccgctcattgtttataatattaaatatcaaatttaatattatttccaacgtgactagaacctatagggtcacacacaa 20941737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 22941868 - 22941961
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||||||||||||||  | |||||||||||||| ||| || || |||||||||||||||||||||||    
T  22941868 gatgtgttgctagataccgctcattgtttataatattaaatatcagatttaatattattgccaacgtgactagaacctatagggtcacacacaa 22941961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 31097433 - 31097526
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||||||||||||||||| || |||||||||||||||||||    |||||||||||||| ||| || || |||||||||||||||||||||||    
T  31097433 gatgtgttgctagataccgttcattgtttataatattaaatatcggatttaatattattgccaacgtgactagaacctatagggtcacacacaa 31097526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 17298419 - 17298321
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| |||||||||||||| |||||||  |||||||||||||||||| || |||||||||||||||||| | || ||||||||| ||||| ||||||||    
T  17298419 agcagtgatgtgttgctagacaccgctcactgtttataatattaaatataagatttaatattattgtcaacgctataagaacctacagggt-acacacaa 17298321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 24694973 - 24694874
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||  ||| |||||  ||||||||||||||||||||||    
T  24694973 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattcccaacgttacgggaacctatagggtcacacacaa 24694874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 24701737 - 24701638
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||  ||| |||||  ||||||||||||||||||||||    
T  24701737 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattcccaacgttacgggaacctatagggtcacacacaa 24701638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 32515 - 32608
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||| |||||||||||   ||||||||| |||| ||| || || |||||||| ||||||||||||||    
T  32515 gatgtgttgctagataccgctcattgtttatgatattaaataatggatttaatatcattgccaacgtgactagaacctaaagggtcacacacaa 32608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 23546538 - 23546631
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||| ||||||||||  | ||||||||| |||| ||| || || |||||||| ||||||||||||||    
T  23546538 gatgtgttgctagataccgctcattgtttatgatattaaatattagatttaatatcattgccaacgtgactagaacctaaagggtcacacacaa 23546631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 150
Target Start/End: Complemental strand, 9811417 - 9811286
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaatataac 118  Q
    |||||||||||||||||||||| || |||||| || ||||||  | |||||||||||||  ||| || || ||||||||||||||||||||||| |||||    
T  9811417 gatgtgttgctagataccgctcattatttatagtaataaatattagatttaatattattaccaacgtgactagaacctatagggtcacacacaa-ataac 9811319  T
Q  119 gttcaaaag-gagaaatataagtaagacttata 150  Q
      ||||||| || | ||||||||| ||||||||    
T  9811318 agtcaaaagagaaatatataagtatgacttata 9811286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 19706734 - 19706635
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    ||||||||||||||  || |||||   |||||||||||||||||||||    
T  19706734 agcagtgatgtgttgctagataccgctcagtgtttataatattaaatatgtgatttaatattattgcaaacgttacggaaacctatagggtcacacacaa 19706635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 108
Target Start/End: Complemental strand, 19714013 - 19713918
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacac 108  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  |||||||||| |||||||    
T  19714013 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagagtcacac 19713918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 5098266 - 5098382
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaatataac 118  Q
    |||||||||||||||||||||| ||||||||| |||||||||  | |||||||||||||||||| || || ||||  || || ||||||||||| | |||    
T  5098266 gatgtgttgctagataccgctcattgtttatagtattaaatattagatttaatattattgtcaacgtgactagaatataaagagtcacacacaa-agaac 5098364  T
Q  119 gttcaaaaggagaaatata 137  Q
    | |||||| ||||||||||    
T  5098365 ggtcaaaa-gagaaatata 5098382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 12764674 - 12764581
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| || |||||| || ||||||  | |||||||||||||  ||| || || |||||||||||||||||||||||    
T  12764674 gatgtgttgctagataccgctcattatttatagtaataaatattagatttaatattattaccaacgtgactagaacctatagggtcacacacaa 12764581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 150
Target Start/End: Original strand, 39535809 - 39535931
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaatataac 118  Q
    |||||||||||||||||||||| |||||||||||||||||||       ||||||||||| ||| || || ||||||||| ||||||||||||||  ||     
T  39535809 gatgtgttgctagataccgctcattgtttataatattaaata-------taatattattgccaacgtgactagaacctatggggtcacacacaat-gaat 39535900  T
Q  119 gttcaaaaggagaaatataagtaagacttata 150  Q
      |||||| |||||||||||||| ||||||||    
T  39535901 agtcaaaa-gagaaatataagtatgacttata 39535931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 17282973 - 17282874
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| |||||| ||||||| || ||||  ||||||||||||||||||    |||||||||||||||||| | |||||||||||  ||||||||||||||    
T  17282973 agcagtgatgtgctgctagacactgctcactgtttataatattaaatattggatttaatattattgtcaacgctacaagaacctgcagggtcacacacaa 17282874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 12789349 - 12789256
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| ||||||||  ||||| |||  | ||||||||| |||| ||| || || |||||||| ||||||||||||||    
T  12789349 gatgtgttgctagataccgctcattgtttatggtattagatattagatttaatatcattgccaacgtgactagaacctaaagggtcacacacaa 12789256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 24932992 - 24932899
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| ||||||||  ||||| |||  | ||||||||| |||| ||| || || |||||||| ||||||||||||||    
T  24932992 gatgtgttgctagataccgctcattgtttatggtattagatattagatttaatatcattgccaacgtgactagaacctaaagggtcacacacaa 24932899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 18568009 - 18567946
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaa 82  Q
    ||||||||||||||||||||||  ||||||||||||||||||    ||||||||||||||||||    
T  18568009 gatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgtcaa 18567946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 7865114 - 7865021
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||||||| |||||| ||||| || |||||| || ||||||  | |||||||||||||  ||| || || |||||||||||||||||||||||    
T  7865114 gatgtgttgttagataacgctcattatttatagtaataaatattagatttaatattattaccaacgtgactagaacctatagggtcacacacaa 7865021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 39539248 - 39539314
Alignment:
Q  21 tgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgtta 87  Q
    |||||||||||||||||||   | ||||||||||||||||    |||||||||||||| ||||||||    
T  39539248 tgtgttgctagataccgctaactatttataatattaaatatgtgatttaatattattgccaatgtta 39539314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 3e-28; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 19 - 185
Target Start/End: Complemental strand, 28134408 - 28134243
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaatataac 118  Q
    |||||||||||||||||||||| |||||||||||||||||||  | |||||||||||||| ||| || || ||||||||||||||||||||||| | |||    
T  28134408 gatgtgttgctagataccgctcattgtttataatattaaatatcagatttaatattattgccaacgtgaccagaacctatagggtcacacacaa-agaac 28134310  T
Q  119 gttcaaaag-gagaaatataagtaagacttataacttgggttgtatttagcaaataacgctaattagt 185  Q
      ||||||| || | ||||||||| ||||||||    ||| ||||||||| |||||| ||||||||||    
T  28134309 agtcaaaagagaaatatataagtacgacttatataacggg-tgtatttagtaaataaagctaattagt 28134243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 19706124 - 19706031
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||||||||||||||  | |||||||||||||| ||| || || |||||||||||||||||||||||    
T  19706124 gatgtgttgctagataccgctcattgtttataatattaaatatcagatttaatattattgccaacgtgactagaacctatagggtcacacacaa 19706031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 9456732 - 9456825
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||||||||||||||  | |||||||||||||| ||| || || |||||||| ||||||||||||||    
T  9456732 gatgtgttgctagataccgctcattgtttataatattaaatattagatttaatattattgccaacgtgactagaacctaaagggtcacacacaa 9456825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 9460828 - 9460921
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||||||||||||||  | |||||||||||||| ||| || || |||||||| ||||||||||||||    
T  9460828 gatgtgttgctagataccgctcattgtttataatattaaatattagatttaatattattgccaacgtgactagaacctaaagggtcacacacaa 9460921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 20779331 - 20779238
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||||||||||||||  | |||||||||||||| ||| || || |||||||| ||||||||||||||    
T  20779331 gatgtgttgctagataccgctcattgtttataatattaaatattagatttaatattattgccaacgtgactagaacctaaagggtcacacacaa 20779238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 18252722 - 18252821
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  18252722 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 18252821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 18532029 - 18531930
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  18532029 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 18531930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 27310092 - 27309993
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  27310092 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 27309993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 22613109 - 22613201
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||||||| ||||||  | |||||||||||||| ||| || || |||||||||||||||||||||||    
T  22613109 gatgtgttgctagataccgctcattgtttataata-taaatatcagatttaatattattgccaacgtgactagaacctatagggtcacacacaa 22613201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 27277069 - 27276976
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||| |||||||||||||  ||||||||||||||||||    |||||||||||||||||| ||||| ||||| |||||||||||||||||    
T  27277069 gatgtgttactagataccgctcactgtttataatattaaatatgtgatttaatattattgtcaacgttacgagaacttatagggtcacacacaa 27276976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 47667170 - 47667077
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||||||||||||||  | | |||||||||||| ||| || || |||||||| ||||||||||||||    
T  47667170 gatgtgttgctagataccgctcattgtttataatattaaatatcagaattaatattattgccaacgtgactagaacctaaagggtcacacacaa 47667077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 27130925 - 27130826
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| ||||   ||||||||||||||||||||||    
T  27130925 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttatgggaacctatagggtcacacacaa 27130826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 33283542 - 33283449
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| ||||||||| |||||||||  | ||||||||| |||| ||| || || |||||||| ||||||||||||||    
T  33283542 gatgtgttgctagataccgctcattgtttatagtattaaatattagatttaatatcattgccaacgtgactagaacctaaagggtcacacacaa 33283449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 35935941 - 35936034
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||||||||||||||||| || ||||||||| |||||||||  | |||||||||||||| ||| || || |||||||||||| ||||||||||    
T  35935941 gatgtgttgctagataccgttcattgtttatattattaaatattagatttaatattattgccaacgtgactagaacctataggatcacacacaa 35936034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 36816144 - 36816051
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||||||||||||||  ||||  ||||||||||||||||||    ||||||||||||||||||||||||  ||| ||||||||||||||||||    
T  36816144 gatgtgttgctagatattgctcactgtttataatattaaatatgtgatttaatattattgtcaatgttacgggaatctatagggtcacacacaa 36816051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 43802050 - 43801957
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||| ||||||||||||| ||||||||||| |||||||  | |||||||||||||| ||| || || ||||||||| |||||||||||||    
T  43802050 gatgtgttactagataccgctcattgtttataattttaaatatcatatttaatattattgccaacgtgactagaacctattgggtcacacacaa 43801957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 150
Target Start/End: Original strand, 8728280 - 8728410
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaatataac 118  Q
    |||||||| |||||||| ||||  ||||||||||||||||||  | |||||||||||||| |||||| || ||||| ||| ||||||||||||| | ||     
T  8728280 gatgtgttcctagatactgctcactgtttataatattaaatattagatttaatattattgccaatgtgactagaacttatggggtcacacacaaaagaat 8728379  T
Q  119 gttcaaaaggagaaatataagtaagacttata 150  Q
      |||||| ||||||||||||||  |||||||    
T  8728380 agtcaaaa-gagaaatataagtataacttata 8728410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 16358550 - 16358451
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| |||||||||||||||| |||||  |||||||| |||||||||  | |||||||||||||| ||| |||||  ||||||||||||||||| ||||    
T  16358550 agcagtgatgtgttgctagatatcgctcactgtttatagtattaaatatgagatttaatattattgccaacgttacgggaacctatagggtcacaaacaa 16358451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 634556 - 634645
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacaca 109  Q
    |||||||||||||||||||||| ||||||||| |||| ||||  | |||||||||||||| ||| || || ||||||||||||||||||||    
T  634556 gatgtgttgctagataccgctcattgtttatagtatt-aatattagatttaatattattgccaacgtgactagaacctatagggtcacaca 634645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 20390925 - 20390832
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||| ||||||||| ||||||||  |||||||||  | ||||||||| |||| |||||| || |||||||| ||||||||||||||    
T  20390925 gatgtgttgctacataccgctcattgtttatggtattaaatattagatttaatatcattgccaatgtgactagaacctaaagggtcacacacaa 20390832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 22669943 - 22669850
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||| ||||||||| |   ||||||||| |||| ||| || || |||||||| ||||||||||||||    
T  22669943 gatgtgttgctagataccgctcattgtttatgatattaaatgatggatttaatatcattgccaacgtgactagaacctaaagggtcacacacaa 22669850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 31234439 - 31234340
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||| |||||||| |||   ||||||||||||||||| || ||||||| |||||||||| || || | |||||| ||||||||||||||    
T  31234439 agcagtgatgtgttgttagataccactcaccgtttataatattaaatataatatttaattttattgtcaacgtgaccataacctacagggtcacacacaa 31234340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 14482506 - 14482599
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| ||||||||  ||||| |||  | ||||||||| |||| ||| || || |||||||| ||||||||||||||    
T  14482506 gatgtgttgctagataccgctcattgtttatggtattagatattagatttaatatcattgccaacgtgactagaacctaaagggtcacacacaa 14482599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 42816675 - 42816582
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||| ||||||||| |   ||||||||| |||| ||| ||  | |||||||| ||||||||||||||    
T  42816675 gatgtgttgctagataccgctcattgtttatgatattaaatgatggatttaatatcattgccaacgtgcctagaacctaaagggtcacacacaa 42816582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 22641397 - 22641298
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||| |||| ||||| |||||  |||||||||||||||| |    |||| ||||||||| ||| ||||| |||||||||||||||||||||||    
T  22641397 agcagcgatgttttgcgagatatcgctcactgtttataatattaaacatgtgatttcatattattgccaacgttacgagaacctatagggtcacacacaa 22641298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 112
Target Start/End: Original strand, 35132557 - 35132647
Alignment:
Q  21 tgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||||||||||||||||||  | ||||| |||||||||| || |||||||||||||| ||| ||| || ||||||| | ||||||| ||||    
T  35132557 tgtgttgctagataccgctcactatttatgatattaaatataatatttaatattattg-caacgttgcaggaacctacacggtcacatacaa 35132647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 51550346 - 51550294
Alignment:
Q  43 tgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaaccta 97  Q
    ||||||||||||||||||| |  |||||||||||| |||||||||||||||||||    
T  51550346 tgtttataatattaaataaga--tttaatattattatcaatgttacaagaaccta 51550294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 16069669 - 16069746
Alignment:
Q  32 ataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacac 110  Q
    |||||||||  | |||||||||||||||| | ||||||||| |||| ||||  ||| ||||||||| ||||||||||||    
T  16069669 ataccgctcactatttataatattaaatatacaatttaata-tattatcaacattagaagaacctacagggtcacacac 16069746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 14234670 - 14234606
Alignment:
Q  43 tgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcaca 107  Q
    |||||||||||||||||     |||||||||||||||| |||| || |||||||| |||||||||    
T  14234670 tgtttataatattaaatgtgtgatttaatattattgtcgatgtcacgagaacctacagggtcaca 14234606  T

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Target: scaffold0112 (Bit Score: 62; Significance: 5e-27; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 800 - 893
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||||||||||||||  | |||||||||||||| ||| || || |||||||||||||||||||||||    
T  800 gatgtgttgctagataccgctcattgtttataatattaaatatcagatttaatattattgccaacgtgactagaacctatagggtcacacacaa 893  T

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Target: scaffold0390 (Bit Score: 60; Significance: 8e-26; HSPs: 2)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 13465 - 13366
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||||||| |||||  ||||||||||||||||||||||    
T  13465 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgtcaacgttacgggaacctatagggtcacacacaa 13366  T

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Target: scaffold0390; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 6449 - 6350
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  6449 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 6350  T

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Target: scaffold0111 (Bit Score: 60; Significance: 8e-26; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 19 - 150
Target Start/End: Original strand, 27159 - 27289
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaatataac 118  Q
    |||||||||||||||||| ||| |||||||||||||||||||  | |||||||||||||| ||| || || | ||||||| ||||||||||||| | ||     
T  27159 gatgtgttgctagatacctctcattgtttataatattaaatattatatttaatattattgccaacgtgactaaaacctatggggtcacacacaaaagaat 27258  T
Q  119 gttcaaaaggagaaatataagtaagacttata 150  Q
    | |||||| ||||||||||| |||||||||||    
T  27259 ggtcaaaa-gagaaatataattaagacttata 27289  T

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Target: scaffold0389 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 779 - 872
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||||||||||||||  | |||||||||||||| ||| || || |||||||| ||||||||||||||    
T  779 gatgtgttgctagataccgctcattgtttataatattaaatatcagatttaatattattgccaacgtgactagaacctaaagggtcacacacaa 872  T

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Target: scaffold0028 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 120346 - 120439
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| |||||||||||||||||||  | |||||||||||||| ||| || || |||||||| ||||||||||||||    
T  120346 gatgtgttgctagataccgctcattgtttataatattaaatattagatttaatattattgccaacgtgactagaacctaaagggtcacacacaa 120439  T

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Target: scaffold0006 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 67093 - 67000
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| ||||||||| |||||||||  | |||||||||||||||||| || || |||||||||||| ||||||||||    
T  67093 gatgtgttgctagataccgctcattgtttatagtattaaatattagatttaatattattgtcaacgtgactagaacctataggatcacacacaa 67000  T

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Target: scaffold0220 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 13 - 109
Target Start/End: Original strand, 18979 - 19075
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacaca 109  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||| |||||||||||||||||||    
T  18979 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacaggaacctatagggtcacaca 19075  T

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Target: scaffold0023 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 13 - 144
Target Start/End: Complemental strand, 108814 - 108682
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| |||||||| |||||||| |||| ||  ||||||||||||| || | |||||||||||||||||| || | ||||||||||||||| ||||| ||    
T  108814 agcagtgatgtgtttctagatactgctcattcattataatattaaagaatagatttaatattattgtcaacgtgaaaagaacctatagggttacacataa 108715  T
Q  113 tataacgttcaaaagga-gaaatataagtaaga 144  Q
    || |||| |||||| || |||||||||||||||    
T  108714 tagaacggtcaaaatgaggaaatataagtaaga 108682  T

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Target: scaffold0433 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 7799 - 7898
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  7799 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 7898  T

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Target: scaffold0234 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 1836 - 1737
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  1836 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 1737  T

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Target: scaffold0234; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 10727 - 10628
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  10727 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 10628  T

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Target: scaffold0063 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 6214 - 6313
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  | ||||||||||||||||    |||||||||||||||||| |||||  ||||||||||||||||||||||    
T  6214 agcagtgatgtgttgctagataccgctcactatttataatattaaatatgtgatttaatattattgtcaacgttacgggaacctatagggtcacacacaa 6313  T

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Target: scaffold0061 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 225 - 126
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  225 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 126  T

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Target: scaffold0061; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 5736 - 5637
Alignment:
Q  13 agcagagatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||    |||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  5736 agcagtgatgtgttgctagataccgctcactgtttataatattaaatatgtgatttaatattattgccaacgttacgggaacctatagggtcacacacaa 5637  T

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Target: scaffold0031 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 39670 - 39579
Alignment:
Q  21 tgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||||| ||||||| ||||||||||||||||||||||||  | |||||||||||||| ||| || || |||||||||||||||||||||||    
T  39670 tgtgttgttagatactgctcgttgtttataatattaaatattacatttaatattattgccaacgtgactagaacctatagggtcacacacaa 39579  T

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Target: scaffold0686 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 112
Target Start/End: Complemental strand, 8188 - 8106
Alignment:
Q  30 agataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||||||||| |||||||||||||||||||  | |||||||||||||| ||| || || |||||||||||||||||||||||    
T  8188 agataccgctcattgtttataatattaaatatcagatttaatattattgccaacgtgactagaacctatagggtcacacacaa 8106  T

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Target: scaffold0017 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 34 - 112
Target Start/End: Original strand, 128128 - 128206
Alignment:
Q  34 accgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||||| ||||||||| |||||||||  | |||||||||||||||||| || || |||||||||||||||||||||||    
T  128128 accgctcattgtttatagtattaaatattagatttaatattattgtcaacgtgactagaacctatagggtcacacacaa 128206  T

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Target: scaffold0264 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 3361 - 3268
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| ||||||||  |||||||||  | ||||||||| |||| ||| || || |||||||| ||||||||||||||    
T  3361 gatgtgttgctagataccgctcattgtttatggtattaaatattagatttaatatcattgccaacgtgactagaacctaaagggtcacacacaa 3268  T

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Target: scaffold0086 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 54380 - 54473
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||||||||||| ||||||||| |||| ||||  | ||||| |||||||| ||| || || ||||| |||||||||||||||||    
T  54380 gatgtgttgctagataccgctcattgtttatagtattgaatattagatttagtattattgccaacgtgactagaacttatagggtcacacacaa 54473  T

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Target: scaffold0008 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 229900 - 229807
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||||||||| ||||||||||  |||||||||| | |||||    |||||||||||||||||| |||||   |||||||||||||||||||||    
T  229900 gatgtgttgctggataccgctcactgtttataatttgaaatatgtgatttaatattattgtcaacgttacggcaacctatagggtcacacacaa 229807  T

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Target: scaffold0466 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 12634 - 12575
Alignment:
Q  19 gatgtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattg 78  Q
    |||||||||||||||||||||| ||||||||| |||||||||  | ||||||||||||||    
T  12634 gatgtgttgctagataccgctcattgtttatagtattaaatattagatttaatattattg 12575  T

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Target: scaffold1303 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 112
Target Start/End: Complemental strand, 1425 - 1378
Alignment:
Q  65 atttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    |||||||||||||| ||| ||||| |||||||||||||||||||||||    
T  1425 atttaatattattgccaacgttacgagaacctatagggtcacacacaa 1378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 24473 - 24560
Alignment:
Q  22 gtgttgctagataccgctcgttgtttataatattaaataaaaaatttaatattattgtcaatgttacaagaacctatagggtcacacacaa 112  Q
    ||||||||||||||| |||  ||||||||||||| ||||| |   || ||||||||||||| |||| |||||| || | ||||||||||||    
T  24473 gtgttgctagatacccctcagtgtttataatattgaataaca---tttatattattgtcaacgttagaagaacttaaaaggtcacacacaa 24560  T

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