View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10651_low_15 (Length: 268)
Name: NF10651_low_15
Description: NF10651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10651_low_15 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 16 - 268
Target Start/End: Complemental strand, 40836014 - 40835762
Alignment:
| Q |
16 |
acagctcacatgtatggttgtatnnnnnnncacatacttcattctctcaacgttatccttgaacataacaacactcacaaactccactctctgtgtcaca |
115 |
Q |
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| T |
40836014 |
acagctcacatgtatggttgtataaaaaaacacatacttcattctctcaacgttatccttgaacataacaacactcacaaactccactctctgtgtcaca |
40835915 |
T |
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| Q |
116 |
atggcaaaagacattgaagccgaacctcaaggtggtgtaccacacaaggactaccatgacccaccaccagctccactctttgacaccgctgaacttggcc |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
40835914 |
atggcaaaagacattgaagccgaacctcaaggtggtgtaccacacaaggactaccatgacccaccaccagctccactctttgacaccgctgaacttggtc |
40835815 |
T |
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| Q |
216 |
agtggtctttctacagagccgtcatcgccgagttcgtcgccactctcctcttc |
268 |
Q |
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|||||||||||||||||||| ||||||| |||||||||||||||||||||||| |
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| T |
40835814 |
agtggtctttctacagagccctcatcgcagagttcgtcgccactctcctcttc |
40835762 |
T |
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