View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10651_low_29 (Length: 225)
Name: NF10651_low_29
Description: NF10651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10651_low_29 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 4 - 225
Target Start/End: Complemental strand, 31536161 - 31535939
Alignment:
| Q |
4 |
tggcttatacatttattaccattgcttcattgctcatactatatgtcctggacagaacatctctagtaacaaatgacaaaattcatgtgtttatttaatc |
103 |
Q |
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| T |
31536161 |
tggcttatacatttattaccattgcttcatggctcatactatatgtcctggacagaacatctctagtaacaaatgacaaaattcatgtgtttatttaatc |
31536062 |
T |
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| Q |
104 |
ttcataaccttaacattaatacaaaaagttaagg-ttattaaattagtggccattgtctcaattaaaagaagtaacattgatttgtaaaacaaaagacat |
202 |
Q |
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| T |
31536061 |
gtcataaccttaacattaatacaaaaagttaaggtttattaaattagtggtcattgtctcaattaaaagaagtaacattgatttgtaaaacaaaagacat |
31535962 |
T |
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| Q |
203 |
ggacatggccgactgtaccacac |
225 |
Q |
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| T |
31535961 |
ggacatggccgactgtaccacac |
31535939 |
T |
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