View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10653_9 (Length: 319)
Name: NF10653_9
Description: NF10653
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10653_9 |
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Alignment Details
Target: chr1 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 24 - 290
Target Start/End: Complemental strand, 7031990 - 7031724
Alignment:
| Q |
24 |
tcatcaacctaaacaagaagaaagggataacaaacatttcaggtactttactcagcaactaaaaaagagagttcgtattaaaagcacagtacaggaaact |
123 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7031990 |
tcatcaacctaaacaagaagaaagggataacaaacatttcaggtactttactcagcaactaaaaaagagagttcgtattaaaagcacagtacaggaaact |
7031891 |
T |
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| Q |
124 |
tccatcaaacaatcaattaattgaaacaacacataccagcttctcaatgacttcatcaggtatttcattgaaatggatctgtaaaacatcacaacacgaa |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7031890 |
tccatcaaacaatcaattaattgaaacaacacataccagcttctcaatgacttcatcaggtatttcattgaaatggatctgtaaaacatcacaacacgaa |
7031791 |
T |
|
| Q |
224 |
atcaattaccacaacagatatctgtgtatttgaactgaaaattcctaaattagacagtactagttca |
290 |
Q |
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||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7031790 |
atcaatttccacaacagatgtctgtgtatttgaactgaaaattcctaaattagacagtactagttca |
7031724 |
T |
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