View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10654_low_2 (Length: 240)
Name: NF10654_low_2
Description: NF10654
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10654_low_2 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 17 - 240
Target Start/End: Complemental strand, 32665260 - 32665037
Alignment:
| Q |
17 |
accaaaaaccaatcaaataaatacccaataagaaatacgttttctaagcacacaaattgatatgatcacttactttctatcattgaggagatcaaacagt |
116 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32665260 |
accaaaaaccaatcaaataaatacccaataagaaatatgttttctaagcacacaaattgatatgatcacttactttctatcattgaggagatcaaacagt |
32665161 |
T |
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| Q |
117 |
tttcccccatatatttcgaaaaaactaacgtataattggaaaccttggctctggtatgtgcggtacattaatcttaaaatatcttgggatgctttgagag |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32665160 |
tttcccccatatatttcgaaaaaactaacgtataattggaaaccttggctctggtatgtgcggtacattaatcttaaaatatcttgggatgctttgagag |
32665061 |
T |
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| Q |
217 |
gcaatggttgcatagtatacgtct |
240 |
Q |
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|||||||||||||||||||||||| |
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| T |
32665060 |
gcaatggttgcatagtatacgtct |
32665037 |
T |
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