View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10656_low_1 (Length: 376)
Name: NF10656_low_1
Description: NF10656
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10656_low_1 |
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Alignment Details
Target: chr2 (Bit Score: 322; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 22 - 366
Target Start/End: Complemental strand, 15420550 - 15420208
Alignment:
| Q |
22 |
gatccaaattcttttggagatgaatgtgaaatgagcatgtcagattttatggacaaaccttggaaaccattaactagaaaagttcaaattccaggcgcta |
121 |
Q |
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| T |
15420550 |
gatccaaattcttttggagatgaatgtgaaatgagcatgtcagattttatggacaaaccttggaaaccattaactagaaaagttcaaattccaggcgcta |
15420451 |
T |
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| Q |
122 |
tactcagtccttataggtacctttcttaattatggtatatagtttttgttgcaatatgtataaaggttatatgtctatggtttgcattcaaaataaaatt |
221 |
Q |
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| T |
15420450 |
tactcagtccttataggtacctttcttaattatgctatatagtttttgttacaatattta--aaggttatatgtctatggtttgcattcaaaataaaatt |
15420353 |
T |
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| Q |
222 |
atttgtcttggataatggtagatccttgtagacatgcatcatttctgagatttcataatgatcttatttcaacattttttgttttggttaggagaaacta |
321 |
Q |
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| T |
15420352 |
atttgtcttggataatggtagatccttgtagacatgcatcatttctgagatttcataatgatcttatttcaacattttttgttttggttaggagaaacta |
15420253 |
T |
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| Q |
322 |
ttaataattaaaatgacgttgatagtcatcttacgacggtctctg |
366 |
Q |
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| T |
15420252 |
ttaataattaaaatgacgttgatagtcatcttacgacggtctctg |
15420208 |
T |
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