View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10656_low_4 (Length: 249)
Name: NF10656_low_4
Description: NF10656
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10656_low_4 |
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Alignment Details
Target: chr4 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 36 - 231
Target Start/End: Complemental strand, 49695087 - 49694892
Alignment:
| Q |
36 |
agatgaagaagaagagtgttttgaacttgacgaagaacttccccttctcgaacaagtgcctctgcgtgttactcccttcgctcatttgtctacttacgac |
135 |
Q |
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| T |
49695087 |
agatgaagaagaagagtgttttgaacttgacgaagaacttccccttctcgaacaagtgcctctgcgtgttactcccttcgctcatttgtctacttacgac |
49694988 |
T |
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| Q |
136 |
gacgaagaagaaaacgaagatgatgacgaagaagatggtggtgaaatcatgaatgttgtgagagtaccggagaatgttgtcctcgcaccgagaatt |
231 |
Q |
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| T |
49694987 |
gacgaagaggaaaacgaagatgatgacgaagaagatggtggtgaaatcatgaatgttgtgagagtaccggagaatgttgtcctcgcaccgagaatt |
49694892 |
T |
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