View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10657_low_5 (Length: 249)
Name: NF10657_low_5
Description: NF10657
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10657_low_5 |
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Alignment Details
Target: chr5 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 41809971 - 41810213
Alignment:
| Q |
1 |
taaacctaattgacgttcatctcatgttgttctagnnnnnnnctttggggcttgtccttgacggagttagacagtgtggctacctgttaggaatcggtac |
100 |
Q |
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| T |
41809971 |
taaacctaatggacgttcatctcatgttgttctagtttttttctttggggcttgtccttgacggagttagacagtgtggctacctgttaagaatcggtac |
41810070 |
T |
|
| Q |
101 |
agactgttagatcatattggacttccatgttagaatatttagcacaaacccaattagaggagtgtttagcatattggatttcagtatctaatcttggtga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41810071 |
agactgttagatcatattggacttccatgttagaatatttagcacaaacccaattagaggagtgtttagcatattggatttcagtatctaatcttggtga |
41810170 |
T |
|
| Q |
201 |
ttcatgatccaaaaggtctaaacctaatggcctttcatctcac |
243 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||| |
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| T |
41810171 |
ttcatgatccaaaaggtctaaacctaatggcctttcatgtcac |
41810213 |
T |
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