View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10658_low_34 (Length: 230)
Name: NF10658_low_34
Description: NF10658
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10658_low_34 |
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Alignment Details
Target: chr5 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 7570164 - 7569951
Alignment:
| Q |
1 |
atggataagtgatacattttaatagttgataaattagtaatagaattttaaaattgattttgaaaaactgttgccattaccacttcatcttgtatttcac |
100 |
Q |
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| T |
7570164 |
atggataagtgatacattttaatagttgataaattagtaatagaattttaaaattgatattgaaaaactgttgccattaccacttcatcttgtatttcac |
7570065 |
T |
|
| Q |
101 |
ctggaccctttggtaggggcttgtagtcttctgcataagcatctcaaataattgttataacttgaagt-atacagttcattcaaagttccaacaataaat |
199 |
Q |
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| T |
7570064 |
ctggaccctttggtaggggcttgtagtcttctgcataagcatctcaaataattgttataacttgaagtaatacagttcattcaaagttccaacaataaat |
7569965 |
T |
|
| Q |
200 |
atttgagatatttt |
213 |
Q |
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|||||||||||||| |
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| T |
7569964 |
atttgagatatttt |
7569951 |
T |
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