View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10659_low_12 (Length: 238)
Name: NF10659_low_12
Description: NF10659
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10659_low_12 |
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Alignment Details
Target: chr4 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 56454782 - 56455004
Alignment:
| Q |
1 |
cagaaattcaatatttaagaatcacatacatttacttattcattatcattaaaatatatgtaatcgcataatcataactcataaagtccctgctggttct |
100 |
Q |
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| T |
56454782 |
cagaaattcaatatttaagaatcacatacatttacttattcattatcattaaaatatatgtaatcgtataatcataactcataaagtccctgctggttct |
56454881 |
T |
|
| Q |
101 |
caaaaagtcatatgccaatatcaaatcaattcaatggtagagattctaatgagtttcaacttcaacctcagtttcatgtatgactcccataaatgacatt |
200 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
56454882 |
caaaaagtcatataccaatatcaaatcaattcaatggtagagattctaatgagtttcaacttcaacctcagtttcatgtatgactcccataaatgacatt |
56454981 |
T |
|
| Q |
201 |
aagattctaaaattcataaaatt |
223 |
Q |
| |
|
||||||||||||||||||||||| |
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| T |
56454982 |
aagattctaaaattcataaaatt |
56455004 |
T |
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