View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10659_low_5 (Length: 294)
Name: NF10659_low_5
Description: NF10659
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10659_low_5 |
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Alignment Details
Target: chr3 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 9 - 276
Target Start/End: Original strand, 51710157 - 51710424
Alignment:
| Q |
9 |
agcagagaggtctgcttaagtcacactggcgagcgagggaaatctctttccgataatttttccgttccgtcgttctctgccctcaccgtcgacgccggtg |
108 |
Q |
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|||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51710157 |
agcaaagaggtctgattaagtcacactggcgagcgagggaaatctctttacgataatttttccgttccgtcgttctctgccctcaccgtcgacgccggtg |
51710256 |
T |
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| Q |
109 |
ccgatttttctccgtcttgaaggttcgcatcattttcaaatcttacaacttcaattttctttgactatttcgttatgctaattaattaagattaataata |
208 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51710257 |
ccgatttttctccgtcttgaaggttcgcatcattttcaaatcttataacttcaattttctttgactatttcgttatgctaattaattaagattaataata |
51710356 |
T |
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| Q |
209 |
ttgttagattgattattgatatatgcaataggtgtgtgtgtgccattgtttcaatacaatgactaaga |
276 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
51710357 |
ttgttagattgattattgatatatgcaataggtgtgtgtgcgccattgtttcaatacaatgactaaga |
51710424 |
T |
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