View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10660_low_15 (Length: 291)
Name: NF10660_low_15
Description: NF10660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10660_low_15 |
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Alignment Details
Target: chr5 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 12 - 276
Target Start/End: Original strand, 41172033 - 41172297
Alignment:
| Q |
12 |
aagaaacaacaaaattaaatataattagctgaaacagaaattaaaatcatctcagatacagaactcaaatagaaattaatctgattacacttgaaatcta |
111 |
Q |
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| T |
41172033 |
aagaaacaacaaaattaaatataattagctgaaacagaaattaaaatcatctcagatacagaactcaaatagaaattaatctgattacacttgaaatcta |
41172132 |
T |
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| Q |
112 |
gcgacagtatgaatttaaagaacctaatatagcctaaatcaagaaaactaggtatctgggctgccatacacaatccaaagataggaatggagaaacgtgg |
211 |
Q |
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| T |
41172133 |
gcgacagtatgaatttaaagaacctaatatagcctaaatcaagaaaactaggtatctgggctgccatacacaatccaaagataggaatggagaaacgtgg |
41172232 |
T |
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| Q |
212 |
caacactatgagtcagaaacagaacgataataagaaagaaaatatcaatgagaatgagctgatac |
276 |
Q |
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| T |
41172233 |
caacactatgagtcagaaacagaacgataataagaaagaaaatatcaatgagaatgagctgatac |
41172297 |
T |
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