View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10660_low_23 (Length: 252)

Name: NF10660_low_23
Description: NF10660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10660_low_23
NF10660_low_23
[»] chr4 (60 HSPs)
chr4 (74-248)||(31314719-31314893)
chr4 (72-252)||(25331172-25331362)
chr4 (97-252)||(55302884-55303049)
chr4 (75-252)||(1044848-1045035)
chr4 (98-252)||(32950837-32951001)
chr4 (98-217)||(40537161-40537280)
chr4 (97-252)||(41881082-41881248)
chr4 (97-252)||(42786725-42786890)
chr4 (97-252)||(1112934-1113099)
chr4 (97-252)||(7007415-7007580)
chr4 (97-252)||(12112986-12113151)
chr4 (72-252)||(34228558-34228748)
chr4 (97-252)||(46635648-46635807)
chr4 (75-250)||(41320853-41321038)
chr4 (104-222)||(23987285-23987403)
chr4 (72-252)||(3436634-3436824)
chr4 (97-252)||(22202056-22202221)
chr4 (72-252)||(30009652-30009842)
chr4 (74-217)||(39479332-39479485)
chr4 (127-252)||(28541739-28541874)
chr4 (97-252)||(37046450-37046617)
chr4 (126-252)||(25446091-25446227)
chr4 (127-222)||(7249795-7249900)
chr4 (104-222)||(36479249-36479366)
chr4 (97-219)||(27454078-27454210)
chr4 (104-216)||(12913301-12913413)
chr4 (155-252)||(23464996-23465093)
chr4 (155-252)||(25504707-25504804)
chr4 (104-216)||(56445362-56445474)
chr4 (104-222)||(30967316-30967434)
chr4 (118-248)||(19740929-19741069)
chr4 (117-222)||(50018322-50018427)
chr4 (117-252)||(28483940-28484074)
chr4 (72-202)||(24130956-24131097)
chr4 (117-252)||(53275880-53276025)
chr4 (155-252)||(37915868-37915965)
chr4 (155-252)||(51320962-51321059)
chr4 (155-222)||(5441475-5441542)
chr4 (107-222)||(5800049-5800164)
chr4 (155-222)||(9163147-9163214)
chr4 (155-222)||(27768127-27768194)
chr4 (155-222)||(32322162-32322229)
chr4 (155-222)||(37828470-37828537)
chr4 (155-222)||(54341215-54341282)
chr4 (117-222)||(32684028-32684123)
chr4 (122-252)||(49501546-49501676)
chr4 (122-252)||(49507611-49507741)
chr4 (155-252)||(29649735-29649832)
chr4 (155-222)||(48261198-48261265)
chr4 (173-252)||(49834899-49834978)
chr4 (155-252)||(54853536-54853633)
chr4 (155-216)||(44770921-44770982)
chr4 (97-161)||(11090446-11090510)
chr4 (104-161)||(8712008-8712065)
chr4 (104-160)||(24736478-24736534)
chr4 (173-216)||(28371001-28371044)
chr4 (97-161)||(39307253-39307317)
chr4 (178-222)||(41725196-41725240)
chr4 (103-171)||(41581795-41581864)
chr4 (105-138)||(55047641-55047674)
[»] chr8 (37 HSPs)
chr8 (72-252)||(41479139-41479319)
chr8 (72-252)||(24501787-24501977)
chr8 (72-252)||(43959699-43959879)
chr8 (72-252)||(2704793-2704983)
chr8 (97-252)||(26374429-26374594)
chr8 (97-252)||(42938116-42938281)
chr8 (72-252)||(7506873-7507063)
chr8 (72-252)||(42735251-42735441)
chr8 (72-244)||(42937401-42937583)
chr8 (98-252)||(10392237-10392401)
chr8 (115-252)||(32711311-32711446)
chr8 (72-252)||(5576594-5576785)
chr8 (97-252)||(23115168-23115332)
chr8 (104-222)||(16362268-16362386)
chr8 (104-222)||(18305977-18306095)
chr8 (104-252)||(32497567-32497715)
chr8 (104-222)||(7466407-7466525)
chr8 (104-217)||(42305801-42305914)
chr8 (104-222)||(37857191-37857309)
chr8 (155-252)||(10295448-10295545)
chr8 (104-252)||(31623737-31623875)
chr8 (155-222)||(39467535-39467602)
chr8 (155-222)||(43166757-43166824)
chr8 (117-222)||(4031297-4031392)
chr8 (104-222)||(9288463-9288591)
chr8 (155-252)||(26856109-26856206)
chr8 (97-217)||(4403184-4403314)
chr8 (103-215)||(4950021-4950143)
chr8 (155-222)||(14782202-14782269)
chr8 (155-222)||(18958794-18958861)
chr8 (155-222)||(44725877-44725944)
chr8 (97-214)||(39189815-39189940)
chr8 (155-222)||(19717948-19718015)
chr8 (155-214)||(13478317-13478376)
chr8 (155-216)||(8410465-8410526)
chr8 (97-162)||(9770439-9770504)
chr8 (117-217)||(41070022-41070124)
[»] scaffold0400 (1 HSPs)
scaffold0400 (72-252)||(15008-15198)
[»] scaffold0365 (1 HSPs)
scaffold0365 (72-252)||(15651-15841)
[»] chr6 (19 HSPs)
chr6 (72-252)||(6197452-6197642)
chr6 (97-252)||(1391665-1391830)
chr6 (72-252)||(28002706-28002896)
chr6 (98-252)||(2300738-2300902)
chr6 (97-222)||(29076670-29076805)
chr6 (97-222)||(29111644-29111779)
chr6 (104-217)||(31067569-31067682)
chr6 (104-202)||(4200443-4200541)
chr6 (104-222)||(30385075-30385191)
chr6 (104-222)||(31895767-31895895)
chr6 (97-251)||(7051887-7052051)
chr6 (155-217)||(34773485-34773547)
chr6 (155-252)||(34759117-34759214)
chr6 (104-222)||(7497147-7497274)
chr6 (155-222)||(14262500-14262567)
chr6 (193-252)||(657006-657065)
chr6 (173-217)||(3848286-3848330)
chr6 (97-146)||(2238668-2238717)
chr6 (98-138)||(11113733-11113773)
[»] chr3 (61 HSPs)
chr3 (72-252)||(10139121-10139311)
chr3 (72-252)||(20498250-20498440)
chr3 (72-252)||(996061-996251)
chr3 (97-222)||(27899415-27899540)
chr3 (72-252)||(3206180-3206370)
chr3 (97-252)||(19253868-19254033)
chr3 (97-252)||(33807798-33807964)
chr3 (97-252)||(3999645-3999810)
chr3 (97-252)||(6589605-6589770)
chr3 (97-252)||(29448858-29449023)
chr3 (72-252)||(37820452-37820642)
chr3 (97-252)||(54625633-54625798)
chr3 (72-252)||(35337776-35337964)
chr3 (103-252)||(33996547-33996706)
chr3 (97-252)||(40246885-40247050)
chr3 (97-252)||(44762037-44762202)
chr3 (97-221)||(52079999-52080117)
chr3 (97-252)||(53929128-53929293)
chr3 (155-252)||(1440020-1440117)
chr3 (104-252)||(10728658-10728806)
chr3 (97-252)||(25418407-25418572)
chr3 (97-222)||(39842494-39842619)
chr3 (114-252)||(51699497-51699644)
chr3 (104-252)||(39038081-39038229)
chr3 (104-222)||(50762067-50762185)
chr3 (72-222)||(52114600-52114760)
chr3 (155-252)||(29030047-29030143)
chr3 (104-222)||(37454932-37455050)
chr3 (97-222)||(6035053-6035188)
chr3 (97-161)||(6131233-6131297)
chr3 (141-217)||(10660611-10660687)
chr3 (115-222)||(6975817-6975924)
chr3 (97-216)||(5825139-5825268)
chr3 (155-221)||(22057834-22057900)
chr3 (155-252)||(51737794-51737891)
chr3 (155-252)||(52618033-52618130)
chr3 (155-222)||(18749683-18749750)
chr3 (155-222)||(26107332-26107399)
chr3 (155-222)||(32580247-32580314)
chr3 (155-222)||(48379228-48379295)
chr3 (155-217)||(34484098-34484160)
chr3 (118-222)||(23753427-23753521)
chr3 (155-216)||(40897221-40897282)
chr3 (114-216)||(44276466-44276564)
chr3 (155-252)||(44906581-44906678)
chr3 (155-222)||(36674198-36674265)
chr3 (155-217)||(54628920-54628982)
chr3 (97-150)||(33807680-33807733)
chr3 (155-252)||(17946329-17946426)
chr3 (142-222)||(23535866-23535946)
chr3 (159-222)||(539476-539539)
chr3 (155-222)||(11431597-11431664)
chr3 (155-222)||(20833063-20833130)
chr3 (155-222)||(50903308-50903375)
chr3 (155-222)||(52810449-52810516)
chr3 (155-217)||(31646352-31646414)
chr3 (155-213)||(55235264-55235322)
chr3 (97-161)||(1439894-1439958)
chr3 (104-216)||(15492874-15492990)
chr3 (104-164)||(45862980-45863040)
chr3 (114-160)||(12103733-12103779)
[»] chr7 (58 HSPs)
chr7 (72-252)||(40996623-40996813)
chr7 (72-252)||(43581064-43581254)
chr7 (97-252)||(7718361-7718526)
chr7 (72-252)||(18914709-18914899)
chr7 (72-252)||(30440839-30441029)
chr7 (72-252)||(34695316-34695506)
chr7 (72-252)||(973227-973417)
chr7 (97-252)||(7719259-7719424)
chr7 (72-252)||(47914309-47914499)
chr7 (97-250)||(12893453-12893616)
chr7 (116-221)||(727587-727692)
chr7 (97-252)||(44343395-44343560)
chr7 (72-252)||(47879211-47879401)
chr7 (132-249)||(31638921-31639038)
chr7 (98-222)||(19251605-19251729)
chr7 (72-252)||(20275237-20275427)
chr7 (72-252)||(39219351-39219540)
chr7 (97-252)||(3797066-3797221)
chr7 (97-252)||(9179916-9180071)
chr7 (72-220)||(34009088-34009246)
chr7 (97-218)||(7113529-7113660)
chr7 (117-217)||(44121929-44122029)
chr7 (97-217)||(32142916-32143046)
chr7 (104-252)||(40460723-40460871)
chr7 (104-222)||(509722-509840)
chr7 (97-222)||(10068533-10068668)
chr7 (107-222)||(37327993-37328108)
chr7 (127-218)||(43679491-43679592)
chr7 (104-213)||(19810874-19810983)
chr7 (104-216)||(29585586-29585698)
chr7 (117-252)||(33892279-33892414)
chr7 (155-222)||(3022992-3023059)
chr7 (104-216)||(7993214-7993336)
chr7 (155-222)||(12963767-12963834)
chr7 (155-222)||(23101364-23101431)
chr7 (155-222)||(28342413-28342480)
chr7 (104-252)||(46405447-46405595)
chr7 (117-252)||(39028133-39028268)
chr7 (107-250)||(44623295-44623438)
chr7 (155-252)||(9882303-9882400)
chr7 (155-222)||(18838455-18838522)
chr7 (155-222)||(29614831-29614898)
chr7 (155-222)||(39784165-39784232)
chr7 (104-217)||(17001049-17001152)
chr7 (97-216)||(43187356-43187485)
chr7 (155-216)||(33382709-33382770)
chr7 (173-222)||(47066770-47066819)
chr7 (155-252)||(8675369-8675466)
chr7 (155-252)||(28034872-28034969)
chr7 (155-214)||(10676487-10676546)
chr7 (155-217)||(25805763-25805825)
chr7 (156-222)||(32883848-32883914)
chr7 (173-222)||(12740439-12740488)
chr7 (173-217)||(44256851-44256895)
chr7 (158-217)||(447854-447913)
chr7 (155-202)||(37972934-37972981)
chr7 (125-161)||(12963838-12963874)
chr7 (117-161)||(37972886-37972930)
[»] chr5 (24 HSPs)
chr5 (97-252)||(21147109-21147274)
chr5 (72-252)||(7016713-7016903)
chr5 (97-252)||(33656040-33656205)
chr5 (117-252)||(849189-849334)
chr5 (72-252)||(27458924-27459113)
chr5 (103-252)||(5272924-5273083)
chr5 (104-217)||(5949185-5949298)
chr5 (119-252)||(4240483-4240616)
chr5 (103-252)||(139315-139474)
chr5 (97-252)||(9220716-9220871)
chr5 (104-213)||(1461154-1461263)
chr5 (104-213)||(40013718-40013827)
chr5 (155-252)||(6460834-6460931)
chr5 (72-222)||(32157868-32158031)
chr5 (97-222)||(22746369-22746496)
chr5 (155-252)||(4550324-4550421)
chr5 (155-222)||(13926003-13926070)
chr5 (155-252)||(1152170-1152267)
chr5 (155-252)||(14465294-14465391)
chr5 (155-222)||(14000172-14000239)
chr5 (155-222)||(39852417-39852484)
chr5 (155-213)||(7947640-7947698)
chr5 (97-252)||(9689700-9689864)
chr5 (173-215)||(37013993-37014035)
[»] chr2 (33 HSPs)
chr2 (72-252)||(16269734-16269924)
chr2 (72-252)||(20605279-20605469)
chr2 (97-252)||(24776398-24776563)
chr2 (72-252)||(31170601-31170791)
chr2 (72-252)||(35317105-35317295)
chr2 (72-252)||(14198554-14198744)
chr2 (72-252)||(43847689-43847879)
chr2 (72-252)||(305442-305632)
chr2 (72-252)||(12407423-12407613)
chr2 (97-252)||(5093049-5093214)
chr2 (117-252)||(1789485-1789630)
chr2 (72-252)||(22551740-22551930)
chr2 (103-218)||(32125330-32125455)
chr2 (104-252)||(28740302-28740450)
chr2 (124-222)||(7026677-7026775)
chr2 (104-222)||(3463745-3463863)
chr2 (113-252)||(26601229-26601367)
chr2 (72-252)||(9120169-9120359)
chr2 (97-213)||(10125302-10125418)
chr2 (155-252)||(44765818-44765915)
chr2 (120-216)||(13833457-13833553)
chr2 (155-252)||(28844598-28844695)
chr2 (117-216)||(379016-379115)
chr2 (155-252)||(33135666-33135763)
chr2 (155-252)||(10657449-10657546)
chr2 (155-222)||(26788859-26788926)
chr2 (155-217)||(18177345-18177407)
chr2 (155-217)||(25288237-25288299)
chr2 (104-222)||(6224576-6224684)
chr2 (173-252)||(3574890-3574969)
chr2 (104-205)||(43078653-43078764)
chr2 (173-222)||(21370638-21370687)
chr2 (180-252)||(215320-215392)
[»] scaffold0151 (1 HSPs)
scaffold0151 (72-252)||(38580-38769)
[»] chr1 (43 HSPs)
chr1 (72-218)||(49198244-49198400)
chr1 (72-250)||(19451783-19451971)
chr1 (72-252)||(21222182-21222372)
chr1 (72-252)||(45759984-45760174)
chr1 (72-252)||(50192525-50192716)
chr1 (97-222)||(6304252-6304387)
chr1 (97-222)||(33025578-33025703)
chr1 (97-252)||(35679128-35679293)
chr1 (72-222)||(47654326-47654486)
chr1 (116-252)||(45535979-45536125)
chr1 (97-252)||(35279707-35279872)
chr1 (133-214)||(955823-955904)
chr1 (72-252)||(28824348-28824537)
chr1 (73-252)||(47780746-47780935)
chr1 (102-252)||(49418119-49418279)
chr1 (114-252)||(32588970-32589118)
chr1 (104-222)||(38536106-38536224)
chr1 (104-222)||(38558324-38558442)
chr1 (74-217)||(31572174-31572327)
chr1 (104-252)||(29219321-29219469)
chr1 (97-252)||(29556139-29556305)
chr1 (155-252)||(730183-730281)
chr1 (97-222)||(9577432-9577567)
chr1 (117-217)||(48668805-48668905)
chr1 (155-222)||(6312639-6312706)
chr1 (155-222)||(29396456-29396523)
chr1 (155-222)||(51701645-51701712)
chr1 (117-222)||(18798556-18798651)
chr1 (97-222)||(37014640-37014775)
chr1 (155-252)||(46328077-46328174)
chr1 (155-222)||(25612222-25612289)
chr1 (155-222)||(48177530-48177597)
chr1 (117-252)||(5495126-5495261)
chr1 (155-217)||(9322568-9322630)
chr1 (155-217)||(28387461-28387523)
chr1 (126-250)||(48524356-48524490)
chr1 (131-222)||(47784451-47784542)
chr1 (155-217)||(15835121-15835183)
chr1 (173-252)||(49230921-49231000)
chr1 (172-214)||(31622544-31622586)
chr1 (125-217)||(45272656-45272747)
chr1 (155-222)||(51085860-51085927)
chr1 (132-160)||(730286-730314)
[»] scaffold0037 (1 HSPs)
scaffold0037 (100-252)||(100253-100415)
[»] scaffold0004 (1 HSPs)
scaffold0004 (97-252)||(102137-102302)
[»] scaffold0113 (1 HSPs)
scaffold0113 (97-252)||(38895-39060)
[»] scaffold0276 (1 HSPs)
scaffold0276 (98-219)||(540-671)
[»] scaffold0306 (1 HSPs)
scaffold0306 (104-252)||(13924-14072)
[»] scaffold0152 (1 HSPs)
scaffold0152 (104-252)||(21255-21403)
[»] scaffold0543 (1 HSPs)
scaffold0543 (155-217)||(10637-10699)
[»] scaffold0042 (1 HSPs)
scaffold0042 (155-217)||(58144-58206)
[»] scaffold0922 (1 HSPs)
scaffold0922 (157-222)||(4272-4337)
[»] scaffold0110 (1 HSPs)
scaffold0110 (104-217)||(39624-39747)
[»] scaffold1504 (1 HSPs)
scaffold1504 (155-222)||(936-1002)
[»] scaffold0054 (1 HSPs)
scaffold0054 (104-215)||(36914-37035)
[»] scaffold0347 (1 HSPs)
scaffold0347 (97-186)||(14878-14967)


Alignment Details
Target: chr4 (Bit Score: 113; Significance: 3e-57; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 74 - 248
Target Start/End: Original strand, 31314719 - 31314893
Alignment:
Q  74 agtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatga 173  Q
    ||||||||||||||||       |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||    
T  31314719 agtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatctga 31314818  T
Q  174 tttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttga 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||    
T  31314819 tttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttga 31314893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 72 - 252
Target Start/End: Complemental strand, 25331362 - 25331172
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc---------- 161  Q
    ||||||||||||||||||       |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||              
T  25331362 atagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcc 25331263  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||       |||||||||||||||||||||||    
T  25331262 atcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattga 25331172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 55303049 - 55302884
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------atcaaaatatgatttattaaacaat 186  Q
    ||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||          |||||||| ||||||||||||||||    
T  55303049 caatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaatatccatcaaaatctgatttattaaacaat 55302950  T
Q  187 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  55302949 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 55302884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 75 - 252
Target Start/End: Complemental strand, 1045035 - 1044848
Alignment:
Q  75 gtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------atc 164  Q
    |||||||||||||||       |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||          |||    
T  1045035 gtaaaatcttaaaagaaaaaaacaattctaagaaatcttatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatc 1044936  T
Q  165 aaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||       |||||||||||||||||||||||    
T  1044935 aaaatctgatttattaaacaatccttcgaaagttgaatggttttgaataccactagactttttttaagtgattaagagtcttgattga 1044848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 98 - 252
Target Start/End: Original strand, 32950837 - 32951001
Alignment:
Q  98 aatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------atcaaaatatgatttattaaacaatc 187  Q
    |||| |||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||          |||||||| |||||||||||||||||    
T  32950837 aatcttaagaaatctcatgttttcatgaaagaatttttcatgctaaaatttcactagaaaatcccacaaaattcatcaaaatctgatttattaaacaatc 32950936  T
Q  188 cttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  32950937 cttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 32951001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 98 - 217
Target Start/End: Original strand, 40537161 - 40537280
Alignment:
Q  98 aatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatt 197  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||| | |||||||||||||||  |||||||||||||||| |||||||||    
T  40537161 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcaccacaaaatccatcaaaatcagatttattaaacaatcattcgaaatt 40537260  T
Q  198 tgaatgattttgaataccac 217  Q
    | ||||||||||||||||||    
T  40537261 taaatgattttgaataccac 40537280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 97 - 252
Target Start/End: Original strand, 41881082 - 41881248
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tccatcaaaatatgatttattaaacaat 186  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||          ||||||||||| ||||||||||||||||    
T  41881082 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 41881181  T
Q  187 ccttcgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||||||||||||||||||||||||||| ||        |||||||||||||||||||||||    
T  41881182 ccttcgaaatttgaatgattttgaataccactaaacttttttttaagtgattaagagtcttgattga 41881248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 42786890 - 42786725
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaat----------ccatcaaaatatgatttattaaacaat 186  Q
    ||||| |||||||| | |||||||||||||||||||||| ||| |||||||||||||||||||          |||||||||||||||||||||||||||    
T  42786890 caatcataagaaatctcatgttttcatgaaagacttttttatgataaaatttcactagaaaattccacaaaatccatcaaaatatgatttattaaacaat 42786791  T
Q  187 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||||||||||||||||||||||||||||||       || ||||||||||||||||||||    
T  42786790 ccttcgaaatttgaatgattttgaataccactagactttttttaaatgattaagagtcttgattga 42786725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 1113099 - 1112934
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactag----------aaaatccatcaaaatatgatttattaaacaat 186  Q
    |||||||||||||| | |||||||||||||||||||||||||| |||||||| |||||          ||||||||||||||| ||||||||||||||||    
T  1113099 caatcctaagaaatctcatgttttcatgaaagactttttcatgttaaaattttactaggaaatcccacaaaatccatcaaaatctgatttattaaacaat 1113000  T
Q  187 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    | || |||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  1112999 catttgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 1112934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 7007580 - 7007415
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------atcaaaatatgatttattaaacaat 186  Q
    ||||| |||||||| | |||||||||||||| |  ||||||||||||||||||||||||||||||          |||||||| ||||||||||||||||    
T  7007580 caatcttaagaaatctcatgttttcatgaaaaaaattttcatgctaaaatttcactagaaaatcccacaaaattcatcaaaatctgatttattaaacaat 7007481  T
Q  187 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  7007480 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 7007415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 12113151 - 12112986
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaat----------ccatcaaaatatgatttattaaacaat 186  Q
    |||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||          |||| ||||| ||||||||||||||||    
T  12113151 caatcccaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaattccacaaaatccattaaaatctgatttattaaacaat 12113052  T
Q  187 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||||||||||||||||||| |||||       |||||||||||||| ||||||||    
T  12113051 ccttcgaaatttgaatgattttgaataccattagactttttttaagtgattaagagttttgattga 12112986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 72 - 252
Target Start/End: Original strand, 34228558 - 34228748
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactag----------aaaatcc 161  Q
    ||||||||||||||||||       ||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||          |||||||    
T  34228558 atagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcctacaaaatcc 34228657  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||       |||||||||||| | ||||||||    
T  34228658 atcaaaatctgatttattaaacaatcattcgaaatttcaatgattttgaataccactagactttttttaagtgattaagaattttgattga 34228748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 97 - 252
Target Start/End: Original strand, 46635648 - 46635807
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaata----tgatttattaaacaatccttcg 192  Q
    |||||||||||||| | ||||||| |||||||||||||||||||||||||||||||| |||||||  ||||||     | ||||||||||||||||||||    
T  46635648 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactaaaaaatcccacaaaatcaatcttatttattaaacaatccttcg 46635747  T
Q  193 aaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||||||||||| |||| ||       |||||||||||||||||||||||    
T  46635748 aaatttgaatgattttgaatactactaaactttttttaagtgattaagagtcttgattga 46635807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 75 - 250
Target Start/End: Complemental strand, 41321038 - 41320853
Alignment:
Q  75 gtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaa----------aatccatc 164  Q
    |||||||||||||||       ||||| |||||||| | ||||||| ||||||||||||||||| |||||||||||||||||          ||||||||    
T  41321038 gtaaaatcttaaaagaaaaaatcaatcttaagaaatctcatgtttttatgaaagactttttcatactaaaatttcactagaacatcccacaaaatccatc 41320939  T
Q  165 aaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgatt 250  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||       || ||||||||||||||||||    
T  41320938 aaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaaatgattaagagtcttgatt 41320853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 104 - 222
Target Start/End: Complemental strand, 23987403 - 23987285
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| | || |||||||||||||||||||| || ||||||| ||||| ||||||||||||||| | |||||||||||||||||||||||||||||||    
T  23987403 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccatcaaaatctaatttattaaacaatccttcgaaatttgaatg 23987304  T
Q  204 attttgaataccactagac 222  Q
    |||||||||||||| ||||    
T  23987303 attttgaataccacaagac 23987285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 72 - 252
Target Start/End: Complemental strand, 3436824 - 3436634
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc---------- 161  Q
    ||||||||||||||||||       |||| ||||||||| |||||||||||||||| ||||||||||| ||||||||||||| |||||||              
T  3436824 atagtaaaatcttaaaagaaaaaaacaattctaagaaatcttatgttttcatgaaaaactttttcatgttaaaatttcactacaaaatcccacaaaattc 3436725  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||        || ||||||||||||||||||||    
T  3436724 atcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccattagattttttttaaatgattaagagtcttgattga 3436634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 22202221 - 22202056
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------atcaaaatatgatttattaaacaat 186  Q
    |||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||          |||||||| | ||||||||||||||    
T  22202221 caatgctaagaaatctaatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaattttatttattaaacaat 22202122  T
Q  187 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    | || ||||||| |||||||||||||||||||||||       |||||||||||||||||||||||    
T  22202121 cttttgaaattttaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 22202056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 72 - 252
Target Start/End: Original strand, 30009652 - 30009842
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tcc 161  Q
    ||||||||||||||||||       ||||| |||||||| | ||||||||||||||||||||||||||||||||||| |||||||||          |||    
T  30009652 atagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaattttactagaaaatcccacaaaatcc 30009751  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| ||||||||||||||||| ||  |||||| |||||||||||||||||||||||       |||||||||||||||||||||||    
T  30009752 atcaaaatctgatttattaaacaatcatttaaaatttaaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 30009842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 74 - 217
Target Start/End: Original strand, 39479332 - 39479485
Alignment:
Q  74 agtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tccat 163  Q
    ||||||||||||||||       |||||||||||||| | ||| ||||||||||||||||||| |||||||||||||||||||||          |||||    
T  39479332 agtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgctttcatgaaagactttttcctgctaaaatttcactagaaaatcccacaaaatccat 39479431  T
Q  164 caaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccac 217  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  39479432 caaaatctgatttattaaacaattcttcgaaatttgaatgattttgaataccac 39479485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 127 - 252
Target Start/End: Complemental strand, 28541874 - 28541739
Alignment:
Q  127 agactttttcatgctaaaatttcactagaaaat----------ccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaatacca 216  Q
    |||||||||||||||||||||||||||||||||          |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  28541874 agactttttcatgctaaaatttcactagaaaattccacaaaatccatcaaaatctgatttattaaacaatcattcgaaatttgaatgattttgaatacca 28541775  T
Q  217 ctagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||       |||||||||||||||||||||||    
T  28541774 ctagactttttttaagtgattaagagtcttgattga 28541739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 97 - 252
Target Start/End: Original strand, 37046450 - 37046617
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaattt-cactagaaaa----------tccatcaaaatatgatttattaaacaa 185  Q
    |||||||||||||| | || |||||||||||||||||||||||||||||||| ||||||||||          ||||||||||| |||||||||||||||    
T  37046450 caatcctaagaaatctcatattttcatgaaagactttttcatgctaaaattttcactagaaaattccacaaaatccatcaaaatctgatttattaaacaa 37046549  T
Q  186 tccttcgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||||||||||||||||| |||| ||||||||        |||||||||||||||||||||||    
T  37046550 tccttcgaaatttgaatgattttaaatatcactagacttttttttaagtgattaagagtcttgattga 37046617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 126 - 252
Target Start/End: Complemental strand, 25446227 - 25446091
Alignment:
Q  126 aagactttttcatgctaaaatttcact----------agaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaatacc 215  Q
    |||||||||||||||||||||||||||          | ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  25446227 aagactttttcatgctaaaatttcactaaaaaatcccacaaaatccatcaaaatctgatttattaaacaatcattcgaaatttgaatgattttgaatacc 25446128  T
Q  216 actagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||       |||||||||||||||||||||||    
T  25446127 actagactttttttaagtgattaagagtcttgattga 25446091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 127 - 222
Target Start/End: Original strand, 7249795 - 7249900
Alignment:
Q  127 agactttttcatgctaaaatttcactagaaaa----------tccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaatacca 216  Q
    ||||||||||||||||||||||||||||||||          ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7249795 agactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaatacca 7249894  T
Q  217 ctagac 222  Q
    ||||||    
T  7249895 ctagac 7249900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 104 - 222
Target Start/End: Original strand, 36479249 - 36479366
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| | |||||||||| |||||||||||  |||||||||||||||| |||||||||||||||   |||||||||| |||||||||||||||||||     
T  36479249 aagaaatctcatgttttcataaaagacttttttttgctaaaatttcacta-aaaatccatcaaaatccaatttattaaataatccttcgaaatttgaata 36479347  T
Q  204 attttgaataccactagac 222  Q
    |||||||||||||| ||||    
T  36479348 attttgaataccacgagac 36479366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 97 - 219
Target Start/End: Original strand, 27454078 - 27454210
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactag----------aaaatccatcaaaatatgatttattaaacaat 186  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||          ||||| ||||||||| |||||||||||| |||    
T  27454078 caatcttaacaaatattatgttttcatgaaagactttttcatgccaaaatttcactagaaaattccacaaaattcatcaaaatctgatttattaaataat 27454177  T
Q  187 ccttcgaaatttgaatgattttgaataccacta 219  Q
    | ||| |||||||||||||||||||||||||||    
T  27454178 ctttcaaaatttgaatgattttgaataccacta 27454210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 104 - 216
Target Start/End: Complemental strand, 12913413 - 12913301
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| | |||| ||||||||| |||||||| || |||||||||||||||||||||  ||||||   ||||||||||||||||||| |||||||||||    
T  12913413 aagaaatctcatgtcttcatgaaatactttttcttgttaaaatttcactagaaaatcccacaaaatccaatttattaaacaatccttcaaaatttgaatg 12913314  T
Q  204 attttgaatacca 216  Q
    |||||||||||||    
T  12913313 attttgaatacca 12913301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 155 - 252
Target Start/End: Complemental strand, 23465093 - 23464996
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||||||||    
T  23465093 aaaatccatcaaattctgatttattaaacaatccttcgaaatttgaatggttttgaataccactagacttattttaagtgattaagagtcttgattga 23464996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 155 - 252
Target Start/End: Original strand, 25504707 - 25504804
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||       |||||||||||||||||||||||    
T  25504707 aaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaatatcactggactttttttaagtgattaagagtcttgattga 25504804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 104 - 216
Target Start/End: Original strand, 56445362 - 56445474
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| | |||| || ||||||||||||||| ||||||| ||||||||||||||||  ||||||   ||||||||||||||| |||||||||||||||    
T  56445362 aagaaatctcatgtctttatgaaagactttttcttgctaaagtttcactagaaaatcccacaaaatccaatttattaaacaatcattcgaaatttgaatg 56445461  T
Q  204 attttgaatacca 216  Q
    |||||||||||||    
T  56445462 attttgaatacca 56445474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 104 - 222
Target Start/End: Original strand, 30967316 - 30967434
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| |||| ||||||||||||| |||||| || ||||||| ||||| |||||||  ||||||   |||||||||||||||||| ||||||||||||    
T  30967316 aagaaatcttattttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccaatttattaaacaatcctttgaaatttgaatg 30967415  T
Q  204 attttgaataccactagac 222  Q
    |||||||||||||| ||||    
T  30967416 attttgaataccacaagac 30967434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 118 - 248
Target Start/End: Original strand, 19740929 - 19741069
Alignment:
Q  118 tttcatgaaagactttttcatgctaaaatttcactagaaaa----------tccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattt 207  Q
    |||||||||||||||||||| ||||||||||||||||||||          ||||||||||| | |||||||||||||||||||||||||||||||||||    
T  19740929 tttcatgaaagactttttcaagctaaaatttcactagaaaatcccacaaaatccatcaaaatctaatttattaaacaatccttcgaaatttgaatgattt 19741028  T
Q  208 tgaataccactagacnnnnnnnaagtgattaagagtcttga 248  Q
    | |||||||| ||||       |||||||||| ||||||||    
T  19741029 ttaataccacaagactttttttaagtgattaaaagtcttga 19741069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 117 - 222
Target Start/End: Complemental strand, 50018427 - 50018322
Alignment:
Q  117 ttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaatacca 216  Q
    ||||| |||||||||||||| || ||||||| ||||| ||||||||| |||||   ||||||||||||||||||| ||||||||||||| ||||||||||    
T  50018427 ttttcttgaaagactttttcttgttaaaattacactacaaaatccattaaaattcaatttattaaacaatccttcaaaatttgaatgatcttgaatacca 50018328  T
Q  217 ctagac 222  Q
    | ||||    
T  50018327 caagac 50018322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 252
Target Start/End: Complemental strand, 28484074 - 28483940
Alignment:
Q  117 ttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaatacca 216  Q
    |||||||||||||||||||| || |||| || ||||| |||||||  ||||||   |||||||||| |||||||||||||||||||||||||||||||||    
T  28484074 ttttcatgaaagactttttcttgttaaa-ttacactacaaaatcctacaaaatccaatttattaaataatccttcgaaatttgaatgattttgaatacca 28483976  T
Q  217 ctagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    | ||||       ||||||| || ||||||||||||    
T  28483975 cgagactttttttaagtgatgaaaagtcttgattga 28483940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 202
Target Start/End: Original strand, 24130956 - 24131097
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaaga-ctttttcatgctaaaatttcactag----------aaaatc 160  Q
    ||||||||||||||||||       |||||||||||||| | ||||||||||||||||  |||||||| |||||||||||||||          ||||||    
T  24130956 atagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagatttttttcatcctaaaatttcactagaaaatcccacaaaatc 24131055  T
Q  161 catcaaaatatgatttattaaacaatccttcgaaatttgaat 202  Q
    ||||||||| ||||||||||||||||| ||||||||||||||    
T  24131056 catcaaaatctgatttattaaacaatcattcgaaatttgaat 24131097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 117 - 252
Target Start/End: Complemental strand, 53276025 - 53275880
Alignment:
Q  117 ttttcatgaaagactttttcatgctaaaatttcactagaaaatc----------catcaaaatatgatttattaaacaatccttcgaaatttgaatgatt 206  Q
    |||| ||||||||||||||||||||||||||| | |||||||||          ||||||||| |||||||||| |||||||||||||||||||||||||    
T  53276025 ttttaatgaaagactttttcatgctaaaattttattagaaaatctcacaaaatccatcaaaatctgatttattacacaatccttcgaaatttgaatgatt 53275926  T
Q  207 ttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    || |||| ||||||||       |||||||||| | ||||||||||    
T  53275925 ttaaatatcactagactttttttaagtgattaaaaatcttgattga 53275880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 252
Target Start/End: Complemental strand, 37915965 - 37915868
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||    
T  37915965 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattga 37915868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 252
Target Start/End: Complemental strand, 51321059 - 51320962
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||    
T  51321059 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattga 51320962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 5441542 - 5441475
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5441542 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 5441475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 5800164 - 5800049
Alignment:
Q  107 aaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgatt 206  Q
    |||| |||| ||||||| |||||||||||| || ||||||| | ||| ||||||   ||||||   |||||||||||||||||| |||||||||||||||    
T  5800164 aaatcttatcttttcattaaagactttttcttgttaaaattactctacaaaatctcacaaaatccaatttattaaacaatcctttgaaatttgaatgatt 5800065  T
Q  207 ttgaataccactagac 222  Q
    ||||||||||| ||||    
T  5800064 ttgaataccacaagac 5800049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 9163214 - 9163147
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  9163214 aaaatccatcaaaatttaatttattaaacaatccttcgaaatttgaatgattttgaatatcacaagac 9163147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 27768194 - 27768127
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27768194 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 27768127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 32322229 - 32322162
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  32322229 aaaatccatcaaaattcaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 32322162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 37828470 - 37828537
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37828470 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 37828537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 54341282 - 54341215
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  54341282 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 54341215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 117 - 222
Target Start/End: Original strand, 32684028 - 32684123
Alignment:
Q  117 ttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaatacca 216  Q
    |||||||||||||||||||| || ||||||| ||||| ||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  32684028 ttttcatgaaagactttttcttgttaaaattacactacaaaatcca----------atttattaaacaatccttcgaaatttgaatgattttgaatacca 32684117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 252
Target Start/End: Original strand, 49501546 - 49501676
Alignment:
Q  122 atgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactaga 221  Q
    ||||||||||||||| || ||||||| ||||| ||||| |  ||||||   ||||||||||||||| |||||||||||||||||||||||| |||| |||    
T  49501546 atgaaagactttttcttgttaaaattacactacaaaattccacaaaatccaatttattaaacaatcattcgaaatttgaatgattttgaatgccacaaga 49501645  T
Q  222 cnnnnnnnaagtgattaagagtcttgattga 252  Q
    |       ||||||| || ||||||||||||    
T  49501646 cattttttaagtgatgaaaagtcttgattga 49501676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 252
Target Start/End: Original strand, 49507611 - 49507741
Alignment:
Q  122 atgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactaga 221  Q
    ||||||||||||||| || ||||||| ||||| ||||| |  ||||||   ||||||||||||||| |||||||||||||||||||||||| |||| |||    
T  49507611 atgaaagactttttcttgttaaaattacactacaaaattccacaaaatccaatttattaaacaatcattcgaaatttgaatgattttgaatgccacaaga 49507710  T
Q  222 cnnnnnnnaagtgattaagagtcttgattga 252  Q
    |       ||||||| || ||||||||||||    
T  49507711 cattttttaagtgatgaaaagtcttgattga 49507741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 252
Target Start/End: Original strand, 29649735 - 29649832
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||||   ||||||||||||||| ||||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||    
T  29649735 aaaatccatcaaaatccaatttattaaacaatctttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattga 29649832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 48261265 - 48261198
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   ||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  48261265 aaaatccatcaaaatccaatttattaaacaatccttcaaaatttgaatgattttgaataccacaagac 48261198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 173 - 252
Target Start/End: Original strand, 49834899 - 49834978
Alignment:
Q  173 atttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||    
T  49834899 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattga 49834978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 252
Target Start/End: Original strand, 54853536 - 54853633
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||||   |||||||||||||||||| ||||||||||| |||||||||||||| ||||       ||||||| || ||||||||||||    
T  54853536 aaaatccatcaaaatccaatttattaaacaatcctttgaaatttgaataattttgaataccacaagactttttttaagtgatgaaaagtcttgattga 54853633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 44770921 - 44770982
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaatacca 216  Q
    |||||||| ||||||   ||||||||||||||||||| ||||||||||||||||||||||||    
T  44770921 aaaatccaccaaaatccaatttattaaacaatccttcaaaatttgaatgattttgaatacca 44770982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 161
Target Start/End: Complemental strand, 11090510 - 11090446
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc 161  Q
    |||||||||||||| | ||||||| || ||||||||||| ||||||||||||||||| |||||||    
T  11090510 caatcctaagaaatctcatgtttttattaaagactttttaatgctaaaatttcactaaaaaatcc 11090446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 8712065 - 8712008
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc 161  Q
    ||||||| | ||||||| ||||||||||||||| |||||||||||||||| |||||||    
T  8712065 aagaaatctcatgttttgatgaaagactttttcttgctaaaatttcactataaaatcc 8712008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 160
Target Start/End: Complemental strand, 24736534 - 24736478
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatc 160  Q
    ||||||| | ||||||||||||||||||| ||| || ||||||||||||||||||||    
T  24736534 aagaaatctcatgttttcatgaaagacttcttcttgttaaaatttcactagaaaatc 24736478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 28371044 - 28371001
Alignment:
Q  173 atttattaaacaatccttcgaaatttgaatgattttgaatacca 216  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  28371044 atttattaaacaatcctttaaaatttgaatgattttgaatacca 28371001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 39307253 - 39307317
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc 161  Q
    |||| ||||||||| | ||||||| || | | ||||||||||| |||||||||||||||||||||    
T  39307253 caattctaagaaatctcatgtttttatcagaaactttttcatgttaaaatttcactagaaaatcc 39307317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 41725240 - 41725196
Alignment:
Q  178 ttaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||| ||||||||||||||||||||| ||| ||||    
T  41725240 ttaaacaatccttcaaaatttgaatgattttgaatatcacaagac 41725196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 41581795 - 41581864
Alignment:
Q  103 taagaaatattatgttttcatgaaagacttttt-catgctaaaatttcactagaaaatccatcaaaatat 171  Q
    |||||||| | |||||| ||||||| | ||||| |||| |||||||||||||||||||||  ||||||||    
T  41581795 taagaaatctcatgtttacatgaaatatttttttcatgttaaaatttcactagaaaatcccacaaaatat 41581864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 138
Target Start/End: Original strand, 55047641 - 55047674
Alignment:
Q  105 agaaatattatgttttcatgaaagactttttcat 138  Q
    |||||||| |||||||||||||||||||||||||    
T  55047641 agaaatatcatgttttcatgaaagactttttcat 55047674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 2e-51; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 72 - 252
Target Start/End: Complemental strand, 41479319 - 41479139
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatat 171  Q
    ||||||||||||||||||       |||||||||||||| | |||||||||||||||| |||||||||||||||||| ||||||||||||  |||||| |    
T  41479319 atagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagattttttcatgctaaaattttactagaaaatcccacaaaatct 41479220  T
Q  172 gatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||       |||||||||||||||||||||||    
T  41479219 gatttattaaacaatcattcgaaatttgaatgattttgaataccattagactttttttaagtgattaagagtcttgattga 41479139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 72 - 252
Target Start/End: Original strand, 24501787 - 24501977
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tcc 161  Q
    ||||||||||||||||||       |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||          |||    
T  24501787 atagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcc 24501886  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  24501887 atcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 24501977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 72 - 252
Target Start/End: Complemental strand, 43959879 - 43959699
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatat 171  Q
    ||||||||||||||||||       ||||| |||||||| | ||||||| || ||||||||||||||||||||||||||| | ||||||||||||||| |    
T  43959879 atagtaaaatcttaaaagaaaaaaacaatcataagaaatctcatgttttaattaaagactttttcatgctaaaatttcaccacaaaatccatcaaaatct 43959780  T
Q  172 gatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |       |||||||||||| ||||||||||    
T  43959779 gatttattaaacaatcattcgaaatttgaatgattttgaataccactagtcttttttgaagtgattaagaatcttgattga 43959699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 72 - 252
Target Start/End: Original strand, 2704793 - 2704983
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tcc 161  Q
    ||||||||||||||||||       |||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||          |||    
T  2704793 atagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatatcactagaaaatcccacaaaatcc 2704892  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  2704893 atcaaaatttgatttattaaacaatcattcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 2704983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 97 - 252
Target Start/End: Original strand, 26374429 - 26374594
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tccatcaaaatatgatttattaaacaat 186  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||          ||||||||||| | ||||||||||||||    
T  26374429 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 26374528  T
Q  187 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  26374529 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 26374594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 97 - 252
Target Start/End: Original strand, 42938116 - 42938281
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tccatcaaaatatgatttattaaacaat 186  Q
    |||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||          ||||||||||| ||||||||||||||||    
T  42938116 caatcctaagaaatctcatgttttcatgaaagactttttcaggctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 42938215  T
Q  187 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  42938216 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 42938281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 72 - 252
Target Start/End: Original strand, 7506873 - 7507063
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tcc 161  Q
    ||||||||||||||||||       |||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||          |||    
T  7506873 atagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgtttacatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcc 7506972  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||       |||||||||||||||||||||||    
T  7506973 atcaaaatctgatttattaaacaatccttcaaaatttgaatggttttgaataccactagactttttttaagtgattaagagtcttgattga 7507063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 72 - 252
Target Start/End: Original strand, 42735251 - 42735441
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tcc 161  Q
    ||||||||||||||||||       |||||||||||||| | ||||||| |||||||||||||||| ||||||||||||||||||||          |||    
T  42735251 atagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgtttttatgaaagactttttcaagctaaaatttcactagaaaatcccacaaaatcc 42735350  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||       ||||||||||||||||| |||||    
T  42735351 atcaaaatctgatttattaaacaatacttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttaattga 42735441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 72 - 244
Target Start/End: Complemental strand, 42937583 - 42937401
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc---------- 161  Q
    ||||||||||||||||||       ||||| |||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||              
T  42937583 atagtaaaatcttaaaagaaaaaaacaatcataagaaatctcatgttttcatgaaagactttttaatgctaaaatttcactagaaaatcccacaaaatcc 42937484  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc 244  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  42937483 atcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtc 42937401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 98 - 252
Target Start/End: Original strand, 10392237 - 10392401
Alignment:
Q  98 aatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tccatcaaaatatgatttattaaacaatc 187  Q
    |||||||| |||| | |||||||||||||||| ||||||||||||||||||||||||||||          ||||||||||| |||||||||||||||||    
T  10392237 aatcctaataaatctcatgttttcatgaaagattttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 10392336  T
Q  188 cttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||||||||||||| |||||||||||||||       |||||||||| ||||||||||||    
T  10392337 cttcgaaatttgaatgattctgaataccactagacttttcttaagtgattaaaagtcttgattga 10392401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 115 - 252
Target Start/End: Original strand, 32711311 - 32711446
Alignment:
Q  115 tgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaatac 214  Q
    |||||||||||||||||||||||||||||||||||| ||||   |||| |||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  32711311 tgttttcatgaaagactttttcatgctaaaatttcaatagatt-tcca-caaaatctgatttattaaacaatccttcgaaatttaaatgattttgaatac 32711408  T
Q  215 cactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||       |||||||||||||||||||||||    
T  32711409 cactagactttttttaagtgattaagagtcttgattga 32711446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 72 - 252
Target Start/End: Original strand, 5576594 - 5576785
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactag----------aaaatcc 161  Q
    ||||||||||||||||||       |||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||          |||||||    
T  5576594 atagtaaaatcttaaaaggaaaaaacaatcctaagaaatctcatgttttcataaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcc 5576693  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| || ||||||||||||| ||||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  5576694 atcaaaatctggtttattaaacaattcttcgaaatttgaatgattttgaataccacttgacttttttttaagtgattaagagtcttgattga 5576785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 97 - 252
Target Start/End: Original strand, 23115168 - 23115332
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tccatcaaaatatgatttattaaacaat 186  Q
    |||||||||| ||| | ||||||||||||||||||||||||||| ||||||||| |||||||          ||||||||||| ||||||||||||||||    
T  23115168 caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 23115267  T
Q  187 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||| |||||||||||| |||||||||||||||||       |||||||||||||||||||||||    
T  23115268 ccttccaaatttgaatga-tttgaataccactagactttttttaagtgattaagagtcttgattga 23115332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 104 - 222
Target Start/End: Complemental strand, 16362386 - 16362268
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| | || |||| || ||||| |||||| || ||||||| ||||| |||||||||||||||   |||||||||||||||||||||||||||||||    
T  16362386 aagaaatctcatctttttataaaagattttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatg 16362287  T
Q  204 attttgaataccactagac 222  Q
    |||||||||||||| ||||    
T  16362286 attttgaataccacgagac 16362268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 104 - 222
Target Start/End: Original strand, 18305977 - 18306095
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| | || |||||||||||||||||||| || ||||||| ||||| |||||||  ||||||   ||||||||||||||| |||||||||||||||    
T  18305977 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccaatttattaaacaatctttcgaaatttgaatg 18306076  T
Q  204 attttgaataccactagac 222  Q
    |||||||||||||| ||||    
T  18306077 attttgaataccacaagac 18306095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 252
Target Start/End: Complemental strand, 32497715 - 32497567
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| | || ||||||||||||||||| || || ||||||| ||||| |||||||  ||||||   ||||||||||||||| |||||||||||||||    
T  32497715 aagaaatctcatcttttcatgaaagactttctcttgttaaaattacactacaaaatcccacaaaatccaatttattaaacaatcattcgaaatttgaatg 32497616  T
Q  204 attttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||| ||||       ||||||| || ||||||||||||    
T  32497615 attttgaataccacaagactttttttaagtgatgaaaagtcttgattga 32497567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 104 - 222
Target Start/End: Complemental strand, 7466525 - 7466407
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| | || |||||||||||||||||||| || ||||||| ||||| |||||||  ||||||   |||||||||||||| |||| |||||||||||    
T  7466525 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccaatttattaaacaattcttcaaaatttgaatg 7466426  T
Q  204 attttgaataccactagac 222  Q
    |||||||||||||| ||||    
T  7466425 attttgaataccacaagac 7466407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 104 - 217
Target Start/End: Original strand, 42305801 - 42305914
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| | || |||||||||| ||||||||| || ||||||| ||||| ||||||||| |||||   ||| ||||||||||||||||||||||||||     
T  42305801 aagaaatctcattttttcatgaatgactttttcttgttaaaattacactacaaaatccattaaaatccaattgattaaacaatccttcgaaatttgaatt 42305900  T
Q  204 attttgaataccac 217  Q
    ||||||||||||||    
T  42305901 attttgaataccac 42305914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 104 - 222
Target Start/End: Complemental strand, 37857309 - 37857191
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| | || ||||||||||||| |||||| || | ||||| ||||| |||||||||||||||   ||||||||||||||||||  |||||||||||    
T  37857309 aagaaatctcatcttttcatgaaagattttttcttgttcaaattacactacaaaatccatcaaaatccaatttattaaacaatcctttaaaatttgaatg 37857210  T
Q  204 attttgaataccactagac 222  Q
    | |||||||||||| ||||    
T  37857209 aatttgaataccacaagac 37857191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 252
Target Start/End: Original strand, 10295448 - 10295545
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||    
T  10295448 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattga 10295545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 104 - 252
Target Start/End: Complemental strand, 31623875 - 31623737
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| |||| ||||||||||| |||||||| || ||||||| ||||| ||||||||          |||||||||||||||||||||||||||||||    
T  31623875 aagaaatcttatcttttcatgaaaaactttttcttgttaaaattacactacaaaatcca----------atttattaaacaatccttcgaaatttgaatg 31623786  T
Q  204 attttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||| ||||       ||||||| || ||||||||||||    
T  31623785 attttgaataccacaagactttttttaagtgatgaaaagtcttgattga 31623737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 39467535 - 39467602
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  39467535 aaaatccatcaaaattcaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 39467602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 43166757 - 43166824
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  43166757 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 43166824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 117 - 222
Target Start/End: Original strand, 4031297 - 4031392
Alignment:
Q  117 ttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaatacca 216  Q
    |||||||||||||||||||| || ||||||| ||||| ||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  4031297 ttttcatgaaagactttttcttgttaaaattacactacaaaatcca----------atttattaaacaatccttcgaaatttgaatgattttgaatacca 4031386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 222
Target Start/End: Original strand, 9288463 - 9288591
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------atcaaaatatgatttattaaacaatccttcga 193  Q
    ||||||| | || |||||||||||||||||||| || ||||||| ||||| |||||||          ||||||||   |||||||||||||||||||||    
T  9288463 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaattcatcaaaatccaatttattaaacaatccttcga 9288562  T
Q  194 aatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||||||||||| ||||    
T  9288563 aatttgaatgattttgaataccacaagac 9288591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 252
Target Start/End: Complemental strand, 26856206 - 26856109
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||||   |||||||||||||| |||||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||    
T  26856206 aaaatccatcaaaatccaatttattaaacaatacttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattga 26856109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 217
Target Start/End: Complemental strand, 4403314 - 4403184
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------atcaaaatatgatttattaaacaat 186  Q
    |||||| ||||||| | || |||||||||||||||||||| || ||||||| ||||| |||||||          |||||||    ||||||||||||||    
T  4403314 caatcccaagaaatctcatattttcatgaaagactttttcttgttaaaattacactaaaaaatcccacaaaatccatcaaaacccaatttattaaacaat 4403215  T
Q  187 ccttcgaaatttgaatgattttgaataccac 217  Q
    |||||||||||||||||||||||||||||||    
T  4403214 ccttcgaaatttgaatgattttgaataccac 4403184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 103 - 215
Target Start/End: Original strand, 4950021 - 4950143
Alignment:
Q  103 taagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tccatcaaaatatgatttattaaacaatccttcg 192  Q
    |||||||| |||||||| ||||||| | ||||||||||||||||||||||||||||          ||||||||||| | |||||||||| |||| || |    
T  4950021 taagaaatcttatgtttgcatgaaatattttttcatgctaaaatttcactagaaaattccacaaattccatcaaaatctaatttattaaataatcttttg 4950120  T
Q  193 aaatttgaatgattttgaatacc 215  Q
    ||| |||||||||||||||||||    
T  4950121 aaacttgaatgattttgaatacc 4950143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 14782202 - 14782269
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   ||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  14782202 aaaatccatcaaaatccaatttattaaacaatccttcaaaatttgaatgattttgaataccacaagac 14782269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 18958794 - 18958861
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    ||||||||| |||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18958794 aaaatccattaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 18958861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 44725877 - 44725944
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   ||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  44725877 aaaatccatcaaaatccaatttattaaacaatccttcaaaatttgaatgattttgaataccacaagac 44725944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 39189815 - 39189940
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaat-------atg--atttattaaacaatc 187  Q
    |||||| ||||||| | |||||||||||||||| |||||| || |||||||| |||||||||| |||||||||       ||   |||||||||||||||    
T  39189815 caatcccaagaaatctcatgttttcatgaaagattttttcttgttaaaattt-actagaaaattcatcaaaatccatcaaattcaatttattaaacaatc 39189913  T
Q  188 cttcgaaatttgaatgattttgaatac 214  Q
    |||||||||||||||||| ||||||||    
T  39189914 cttcgaaatttgaatgatgttgaatac 39189940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 19717948 - 19718015
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    ||||||||| |||||   |||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  19717948 aaaatccattaaaatccaatttattaaacaattcttcgaaatttgaatgattttgaataccacaagac 19718015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 13478317 - 13478376
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaatac 214  Q
    |||||||| | |||| | |||||||||||||||||||||||||| || ||||||||||||    
T  13478317 aaaatccaacgaaatctaatttattaaacaatccttcgaaatttaaaagattttgaatac 13478376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 8410465 - 8410526
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaatacca 216  Q
    ||||||||||||| |   ||||| ||||||||||||| |||||| |||||||||||||||||    
T  8410465 aaaatccatcaaagtccaatttagtaaacaatccttccaaatttcaatgattttgaatacca 8410526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 162
Target Start/End: Original strand, 9770439 - 9770504
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcca 162  Q
    |||||||||||||| | ||||||| |||||| | ||||| ||| |||||||||| |||||||||||    
T  9770439 caatcctaagaaatctcatgttttgatgaaatatttttttatgttaaaatttcattagaaaatcca 9770504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 217
Target Start/End: Complemental strand, 41070124 - 41070022
Alignment:
Q  117 ttttcatgaaagactttttcatgctaaaattt--cactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaatac 214  Q
    ||||||||||| |||||||||| || |||| |  |||||||||||||   |||||   |||||| |||||||| || |||||| |||||||||| |||||    
T  41070124 ttttcatgaaatactttttcatacttaaatctcacactagaaaatcccagaaaattcaatttatcaaacaatcatttgaaattggaatgattttaaatac 41070025  T
Q  215 cac 217  Q
    |||    
T  41070024 cac 41070022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 72 - 252
Target Start/End: Original strand, 15008 - 15198
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tcc 161  Q
    ||||||||||||||||||       |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||          |||    
T  15008 atagtaaaatcttaaaagaaaaaaacaatcctaagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcc 15107  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  15108 atcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 15198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 72 - 252
Target Start/End: Original strand, 15651 - 15841
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tcc 161  Q
    ||||||||||||||||||       |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||          |||    
T  15651 atagtaaaatcttaaaagaaaaaaacaatcctaagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcc 15750  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  15751 atcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 15841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 102; Significance: 9e-51; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 72 - 252
Target Start/End: Original strand, 6197452 - 6197642
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tcc 161  Q
    ||||||||||||||||||       |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||          |||    
T  6197452 atagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcc 6197551  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  6197552 atcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 6197642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 1391830 - 1391665
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------atcaaaatatgatttattaaacaat 186  Q
    |||||||||| ||| | ||||||||||||||||||||||||||| ||||||||||||||||||||          |||||||| ||||||||||||||||    
T  1391830 caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 1391731  T
Q  187 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||| ||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  1391730 ccttccaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 1391665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 72 - 252
Target Start/End: Complemental strand, 28002896 - 28002706
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaat----------cc 161  Q
    ||||||||||||||||||       ||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||||||          ||    
T  28002896 atagtaaaatcttaaaagaaaaaaacaatcctaagaagcttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatttcacaaaatcc 28002797  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||       |||||||||||||||||||||||    
T  28002796 atcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattga 28002706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 98 - 252
Target Start/End: Original strand, 2300738 - 2300902
Alignment:
Q  98 aatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tccatcaaaatatgatttattaaacaatc 187  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||          ||||||||||| | |||||||||||||||    
T  2300738 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaatc 2300837  T
Q  188 cttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||||||||||||||| ||||||| |||||       ||||||| |||||||||||||||    
T  2300838 cttcgaaatttgaatgattttcaataccagtagactttttttaagtgatcaagagtcttgattga 2300902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 97 - 222
Target Start/End: Complemental strand, 29076805 - 29076670
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------atcaaaatatgatttattaaacaat 186  Q
    ||||||||| |||| | ||||||| |||||||| |||||||||||||||||||||||||||||||          |||||||| ||||||||||||||||    
T  29076805 caatcctaaaaaatctcatgtttttatgaaagattttttcatgctaaaatttcactagaaaatcctataaaatccatcaaaatctgatttattaaacaat 29076706  T
Q  187 ccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||||||||||||||| |||||||    
T  29076705 ccttcgaaatttgaatgattttgaatactactagac 29076670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 97 - 222
Target Start/End: Complemental strand, 29111779 - 29111644
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------atcaaaatatgatttattaaacaat 186  Q
    ||||||||| |||| | ||||||| |||||||| |||||||||||||||||||||||||||||||          |||||||| ||||||||||||||||    
T  29111779 caatcctaaaaaatctcatgtttttatgaaagattttttcatgctaaaatttcactagaaaatcctataaaatccatcaaaatctgatttattaaacaat 29111680  T
Q  187 ccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||||||||||||||| |||||||    
T  29111679 ccttcgaaatttgaatgattttgaatactactagac 29111644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 104 - 217
Target Start/End: Complemental strand, 31067682 - 31067569
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| | || |||| ||||||||||||||| || ||||||| ||||| |||||||  ||||||   |||||||||||||||||||||||||||||||    
T  31067682 aagaaatctcatctttttatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatg 31067583  T
Q  204 attttgaataccac 217  Q
    ||||||||||||||    
T  31067582 attttgaataccac 31067569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 104 - 202
Target Start/End: Original strand, 4200443 - 4200541
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaat 202  Q
    ||||||| | || |||||||||||||||||||| || ||||||| ||||| |||||||||||||||   ||||||||||||||||||||||||||||||    
T  4200443 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaat 4200541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 104 - 222
Target Start/End: Original strand, 30385075 - 30385191
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| | || ||||||||||||||||| |  || ||||||| ||||| |||||||  ||||||   |||||||||||||||||||||||||||||||    
T  30385075 aagaaatctcatcttttcatgaaagactttgt--tgttaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatg 30385172  T
Q  204 attttgaataccactagac 222  Q
    |||||||||||||| ||||    
T  30385173 attttgaataccacaagac 30385191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 104 - 222
Target Start/End: Complemental strand, 31895895 - 31895767
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------atcaaaatatgatttattaaacaatccttcga 193  Q
    ||||||| | || |||||||||||||||||||| || ||||||| |||||||||||||          ||||||||   |||||||||||||||||||||    
T  31895895 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactagaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 31895796  T
Q  194 aatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||||||||||| ||||    
T  31895795 aatttgaatgattttgaataccacaagac 31895767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 251
Target Start/End: Complemental strand, 7052051 - 7051887
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------atcaaaatatgatttattaaacaat 186  Q
    |||| ||||||||| | ||| ||| |||||| |||||||||||||||||||| ||||||||||||          ||||||||   ||||||||||||||    
T  7052051 caattctaagaaatctcatgattttatgaaaaactttttcatgctaaaattttactagaaaatcctacaaaatccatcaaaatccaatttattaaacaat 7051952  T
Q  187 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattg 251  Q
    ||||||||||||||||||||||||||| |||  |||       ||||||| ||||||||||||||    
T  7051951 ccttcgaaatttgaatgattttgaatatcacacgactttttttaagtgatgaagagtcttgattg 7051887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 217
Target Start/End: Complemental strand, 34773547 - 34773485
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccac 217  Q
    |||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||    
T  34773547 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 34773485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 252
Target Start/End: Original strand, 34759117 - 34759214
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||||   |||||||||||||||||| |||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||    
T  34759117 aaaatccatcaaaatccaatttattaaacaatccttggaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattga 34759214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 222
Target Start/End: Complemental strand, 7497274 - 7497147
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcact---------agaaaatccatcaaaatatgatttattaaacaatccttcgaa 194  Q
    ||||||| | || |||||||||||||||||||| || ||||||| ||||         | |||||||||||||||   |||||||||||| |||||||||    
T  7497274 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccacaaaatccatcaaaatccaatttattaaacactccttcgaa 7497175  T
Q  195 atttgaatgattttgaataccactagac 222  Q
    ||||||||||||||||||||||| ||||    
T  7497174 atttgaatgattttgaataccacaagac 7497147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 14262500 - 14262567
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   |||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  14262500 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttaaatgattttgaataccacaagac 14262567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 657065 - 657006
Alignment:
Q  193 aaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||||||||| ||||||||||||||       |||||||||||||||||||||||    
T  657065 aaatttgaatgatttagaataccactagactttttttaagtgattaagagtcttgattga 657006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 3848330 - 3848286
Alignment:
Q  173 atttattaaacaatccttcgaaatttgaatgattttgaataccac 217  Q
    ||||||||||||||| ||| |||||| ||||||||||||||||||    
T  3848330 atttattaaacaatcattcaaaatttaaatgattttgaataccac 3848286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 146
Target Start/End: Complemental strand, 2238717 - 2238668
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaat 146  Q
    ||||| |||||||| | |||||||||||||||| |||||||| |||||||    
T  2238717 caatcttaagaaatctcatgttttcatgaaagattttttcatactaaaat 2238668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 138
Target Start/End: Original strand, 11113733 - 11113773
Alignment:
Q  98 aatcctaagaaatattatgttttcatgaaagactttttcat 138  Q
    ||||||||||||| | ||||||||||||||||| |||||||    
T  11113733 aatcctaagaaatctcatgttttcatgaaagacgttttcat 11113773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 9e-51; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 72 - 252
Target Start/End: Original strand, 10139121 - 10139311
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tcc 161  Q
    ||||||||||||||||||       |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||          |||    
T  10139121 atagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcc 10139220  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  10139221 atcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 10139311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 72 - 252
Target Start/End: Complemental strand, 20498440 - 20498250
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc---------- 161  Q
    ||||||||||||||||||       |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||              
T  20498440 atagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcc 20498341  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  20498340 atcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 20498250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 72 - 252
Target Start/End: Original strand, 996061 - 996251
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tcc 161  Q
    ||||||||||||||||||       |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||          |||    
T  996061 atagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcc 996160  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||| ||||||||||    
T  996161 atcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagaatcttgattga 996251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 97 - 222
Target Start/End: Complemental strand, 27899540 - 27899415
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaat 196  Q
    ||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||    
T  27899540 caatcataagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcctacaaaatctgatttattaaacaatccttcgaaat 27899441  T
Q  197 ttgaatgattttgaataccactagac 222  Q
    ||||||||||||||||||||| ||||    
T  27899440 ttgaatgattttgaataccaccagac 27899415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 72 - 252
Target Start/End: Original strand, 3206180 - 3206370
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tcc 161  Q
    ||||||||||||||||||       ||||| |||||||| | ||||||||||||||||||||||| |||||||||||||||||||||          |||    
T  3206180 atagtaaaatcttaaaagaaaaaaacaatcataagaaatctcatgttttcatgaaagactttttcttgctaaaatttcactagaaaatcccacaaaatcc 3206279  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  3206280 atcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 3206370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 19254033 - 19253868
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------atcaaaatatgatttattaaacaat 186  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||          |||||||| | ||||||||||||||    
T  19254033 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 19253934  T
Q  187 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  19253933 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 19253868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 97 - 252
Target Start/End: Original strand, 33807798 - 33807964
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tccatcaaaatatgatttattaaacaat 186  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||          ||||||||||| ||||||||||||||||    
T  33807798 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 33807897  T
Q  187 ccttcgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||    
T  33807898 ccttcgaaatttgaatgattttgaataccactagacttttttttaagtgattaagagtcttgattga 33807964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 97 - 252
Target Start/End: Original strand, 3999645 - 3999810
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tccatcaaaatatgatttattaaacaat 186  Q
    |||||||||||||| | ||||||| ||||||||||||||||| |||||||||||||||||||          ||||||||||| ||||||||||||||||    
T  3999645 caatcctaagaaatctcatgtttttatgaaagactttttcattctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 3999744  T
Q  187 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||    
T  3999745 ccttcgaaatttgaatgattttgaataccactagattttttttaagtgattaagagtcttgattga 3999810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 6589770 - 6589605
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------atcaaaatatgatttattaaacaat 186  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||          |||||||| |||||||||||| |||    
T  6589770 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaataat 6589671  T
Q  187 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
     |||||||||||||||||||||||||||||||||||       || ||||||||||||||||||||    
T  6589670 tcttcgaaatttgaatgattttgaataccactagactttttttaaatgattaagagtcttgattga 6589605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 97 - 252
Target Start/End: Original strand, 29448858 - 29449023
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tccatcaaaatatgatttattaaacaat 186  Q
    |||||||||||||| | |||||||||||||||||||||| |||||||||||| |||||||||          ||||||||||| ||||||||||||||||    
T  29448858 caatcctaagaaatctcatgttttcatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 29448957  T
Q  187 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||    
T  29448958 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattgagagtcttgattga 29449023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 72 - 252
Target Start/End: Original strand, 37820452 - 37820642
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tcc 161  Q
    ||||||||||||||||||       ||||| |||||||| | ||||||| ||||||||||||||||||||||||||||||| |||||          |||    
T  37820452 atagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactggaaaatcccacaaaatcc 37820551  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||| ||||||||||    
T  37820552 atcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagaatcttgattga 37820642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 54625798 - 54625633
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------atcaaaatatgatttattaaacaat 186  Q
    ||||| |||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||          |||||||| ||||||||||||||||    
T  54625798 caatcttaagaaatctcatgttttcatgaaaaactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 54625699  T
Q  187 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||||| |||||||||||||||||||       |||||||||||||||||||||||    
T  54625698 ccttcgaaatttgaataattttgaataccactagactttttttaagtgattaagagtcttgattga 54625633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 72 - 252
Target Start/End: Complemental strand, 35337964 - 35337776
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc---------- 161  Q
    ||||||||||||||||||       ||||||||| |||| | |||||||||||||| |||||||||||||||||||||||||||||||||              
T  35337964 atagtaaaatcttaaaagaaaaaaacaatcctaa-aaatctcatgttttcatgaaa-actttttcatgctaaaatttcactagaaaatcccacaaaatcc 35337867  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||       |||||||||||||||||||||||    
T  35337866 atcaaaatctgatttattaaacaatccttcgaaatttgaatttttttgaataccactagactttttttaagtgattaagagtcttgattga 35337776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 103 - 252
Target Start/End: Original strand, 33996547 - 33996706
Alignment:
Q  103 taagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tccatcaaaatatgatttattaaacaatccttcg 192  Q
    |||||||| | ||||||| || ||||||||||||||||||||||||||||||||||          ||||||||||| ||||||||||||||||||||||    
T  33996547 taagaaatctcatgtttttataaaagactttttcatgctaaaatttcactagaaaatccctcaaaatccatcaaaatctgatttattaaacaatccttcg 33996646  T
Q  193 aaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||||||||||||||| ||        |||||||||||||||||||||||    
T  33996647 aaatttgaatgattttgaataccactggattttttttaagtgattaagagtcttgattga 33996706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 40247050 - 40246885
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------atcaaaatatgatttattaaacaat 186  Q
    ||||| |||| ||| | ||||||||||||||||||||||||||| ||||||||||||||||||||          |||||||| ||||||||||||||||    
T  40247050 caatcataaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 40246951  T
Q  187 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||| ||||||||||||||||||||||||||||||       || ||||||| ||||||||||||    
T  40246950 ccttccaaatttgaatgattttgaataccactagactttttttaactgattaatagtcttgattga 40246885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 97 - 252
Target Start/End: Original strand, 44762037 - 44762202
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tccatcaaaatatgatttattaaacaat 186  Q
    ||||| |||||||| | |||||||||| ||||||||||||||||||||||||||||| ||||          ||||||||||| ||||||||||||||||    
T  44762037 caatcttaagaaatctcatgttttcataaaagactttttcatgctaaaatttcactaaaaaatcccacaaaatccatcaaaatctgatttattaaacaat 44762136  T
Q  187 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||| |||||| ||||| |||||||||||||       |||||||||||||||||||||||    
T  44762137 ccttcgaaacttgaataattttaaataccactagactttttttaagtgattaagagtcttgattga 44762202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 97 - 221
Target Start/End: Complemental strand, 52080117 - 52079999
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaat 196  Q
    |||||||||||||| | |||||||||      |||||||||||||||||||||| ||||||||||  |||||| ||||||||||||||||||||| ||||    
T  52080117 caatcctaagaaatctcatgttttca------actttttcatgctaaaatttcattagaaaatcccacaaaatctgatttattaaacaatccttcaaaat 52080024  T
Q  197 ttgaatgattttgaataccactaga 221  Q
    |||||||||||||||||||||||||    
T  52080023 ttgaatgattttgaataccactaga 52079999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 97 - 252
Target Start/End: Original strand, 53929128 - 53929293
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tccatcaaaatatgatttattaaacaat 186  Q
    ||||||||| |||| | |||||||||| ||||| ||||||||||||||||||||||||||||          ||||||||||| | ||||||||||||||    
T  53929128 caatcctaaaaaatctcatgttttcattaaagattttttcatgctaaaatttcactagaaaatcctacaaaatccatcaaaatcttatttattaaacaat 53929227  T
Q  187 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    | ||||| |||| |||||||||||||||||||||||       |||||||||||||||||||||||    
T  53929228 cgttcgatatttaaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 53929293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 155 - 252
Target Start/End: Original strand, 1440020 - 1440117
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  1440020 aaaatccatcaaaatctgatttattaaacaatccttggaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 1440117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 252
Target Start/End: Original strand, 10728658 - 10728806
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| | || |||||||||||||||||||| || ||||||| ||||| |||||||||||||||   ||||||||||||||||||| |||||||||||    
T  10728658 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatccttccaaatttgaatg 10728757  T
Q  204 attttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||| |||||||| ||||       ||||||| || ||||||||||||    
T  10728758 attttaaataccacaagactttttgtaagtgatgaaaagtcttgattga 10728806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 25418572 - 25418407
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------atcaaaatatgatttattaaacaat 186  Q
    |||||||||| ||| | |||||||||||||| |||||||||||| ||||||||||||||||||||          |||||||| ||||||||||||||||    
T  25418572 caatcctaaggaatctcatgttttcatgaaatactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 25418473  T
Q  187 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||  ||||||||||||||||||||||| |||||        |||||||||| ||||||||||||    
T  25418472 cctttcaaatttgaatgattttgaataccgctagattttttgtaagtgattaaaagtcttgattga 25418407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 97 - 222
Target Start/End: Original strand, 39842494 - 39842619
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaat 196  Q
    |||||| ||||||| | || |||||||||||||||||||| || ||||||| || || ||||||| ||||||| | |||||||||||||| |||||||||    
T  39842494 caatcccaagaaatctcatcttttcatgaaagactttttcttgttaaaattacattacaaaatccgtcaaaatctaatttattaaacaattcttcgaaat 39842593  T
Q  197 ttgaatgattttgaataccactagac 222  Q
    ||||||||||||||||| ||| ||||    
T  39842594 ttgaatgattttgaatatcacgagac 39842619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 114 - 252
Target Start/End: Original strand, 51699497 - 51699644
Alignment:
Q  114 atgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------atcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||          |||||||| | ||||||||| |||||||||||||||||||||    
T  51699497 atgttttcacgaaagattttttcatgctaaaatttcactagaaaatcccacaaaattcatcaaaatcttatttattaaccaatccttcgaaatttgaatg 51699596  T
Q  204 attttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||||||||||||        |||||||||||||||||||||||    
T  51699597 attttgaataccactaga-tttttttaagtgattaagagtcttgattga 51699644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 104 - 252
Target Start/End: Complemental strand, 39038229 - 39038081
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| | || |||| ||||||||||||||| || ||||||| ||||| |||||||||||||||   |||||||||||||| ||||||||||||||||    
T  39038229 aagaaatctcatctttttatgaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaattcttcgaaatttgaatg 39038130  T
Q  204 attttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||| ||||||| ||||       ||||||| || ||||||||||||    
T  39038129 attttggataccacaagacttttttaaagtgatgaaaagtcttgattga 39038081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 104 - 222
Target Start/End: Original strand, 50762067 - 50762185
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| | || |||||||||||||||||||| || ||||||| ||||| |||||||||||||||   |||||| |||||||| ||||||||| |||||    
T  50762067 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaatttatcaaacaatcattcgaaattagaatg 50762166  T
Q  204 attttgaataccactagac 222  Q
    |||||||||||||| ||||    
T  50762167 attttgaataccacaagac 50762185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 72 - 222
Target Start/End: Complemental strand, 52114760 - 52114600
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc---------- 161  Q
    ||||||||||||||||||        ||||||||||||| | |||||||||  ||||| |||||||||||||||||| |||||||||| |              
T  52114760 atagtaaaatcttaaaagaaaaaaataatcctaagaaatctcatgttttcacaaaagattttttcatgctaaaattttactagaaaattccacaaaatct 52114661  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  52114660 atcaaaatctgatttattaaacaatcctgcgaaatttgaattattttgaataccactagac 52114600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 252
Target Start/End: Complemental strand, 29030143 - 29030047
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||       |||||||||||||||||||||||    
T  29030143 aaaatccatcaaaatctgatttattaaacaatccttcaaaatttgaatgattttgaataccacaagac-ttttttaagtgattaagagtcttgattga 29030047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 104 - 222
Target Start/End: Complemental strand, 37455050 - 37454932
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| | || ||||||||||| |||||||| || ||||||| ||||| |||||||  ||||||   ||||||||||||||| |||||||||||||||    
T  37455050 aagaaatctcatcttttcatgaaatactttttcttgttaaaattacactacaaaatcccacaaaattcaatttattaaacaatcattcgaaatttgaatg 37454951  T
Q  204 attttgaataccactagac 222  Q
    |||||||||||||| ||||    
T  37454950 attttgaataccacaagac 37454932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 97 - 222
Target Start/End: Original strand, 6035053 - 6035188
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactag----------aaaatccatcaaaatatgatttattaaacaat 186  Q
    ||||| |||||||| | ||||||| ||||||||||||||||||||||||||| |||||          ||||||||||||||| | |||||||||||| |    
T  6035053 caatcttaagaaatctcatgtttttatgaaagactttttcatgctaaaattttactagaaaatcccacaaaatccatcaaaatctaatttattaaacatt 6035152  T
Q  187 ccttcgaaatttgaatgattttgaataccactagac 222  Q
     |||||||||||||||||||||||||| ||| ||||    
T  6035153 gcttcgaaatttgaatgattttgaatatcacgagac 6035188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 6131233 - 6131297
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc 161  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6131233 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc 6131297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 10660687 - 10660611
Alignment:
Q  141 taaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccac 217  Q
    ||||||| ||||| |||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||    
T  10660687 taaaattacactacaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 10660611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 115 - 222
Target Start/End: Complemental strand, 6975924 - 6975817
Alignment:
Q  115 tgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaatac 214  Q
    ||||||||||||||||| ||||||||| |||||| ||||||||||||  |||| |   ||||| |||| ||| |||||||||||||||||||||||||||    
T  6975924 tgttttcatgaaagactgtttcatgctcaaattttactagaaaatcccacaaattccaatttagtaaataattcttcgaaatttgaatgattttgaatac 6975825  T
Q  215 cactagac 222  Q
    ||| ||||    
T  6975824 cacaagac 6975817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 5825268 - 5825139
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------atcaaaatatgatttattaaacaat 186  Q
    ||||| |||||||| | ||||||||||||||| ||||||||||||| |||||||||| |||||||          ||||||||   ||||||||||||||    
T  5825268 caatcataagaaatctcatgttttcatgaaagcctttttcatgctagaatttcactaaaaaatcccacaaaatctatcaaaatccaatttattaaacaat 5825169  T
Q  187 ccttcgaaatttgaatgattttgaatacca 216  Q
    ||||| ||||||||||||||||||||||||    
T  5825168 ccttcaaaatttgaatgattttgaatacca 5825139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 22057900 - 22057834
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactaga 221  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  22057900 aaaatccatcaaaatctgatttattaaacaatccatcgaaatttgaatgattttaaataccactaga 22057834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 252
Target Start/End: Original strand, 51737794 - 51737891
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||    
T  51737794 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattga 51737891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 252
Target Start/End: Original strand, 52618033 - 52618130
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||    
T  52618033 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattga 52618130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 18749750 - 18749683
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18749750 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 18749683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 26107399 - 26107332
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  26107399 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 26107332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 32580314 - 32580247
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  32580314 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 32580247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 48379295 - 48379228
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  48379295 aaaatccatcaaaattcaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 48379228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 34484098 - 34484160
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccac 217  Q
    |||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||    
T  34484098 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 34484160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 222
Target Start/End: Original strand, 23753427 - 23753521
Alignment:
Q  118 tttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccac 217  Q
    ||||||||||||||||||| || ||||||| ||||| ||||||||          |||||||||||||||||||||||||||||||||||||||||||||    
T  23753427 tttcatgaaagactttttcttgttaaaattacactacaaaatcca----------atttattaaacaatccttcgaaatttgaatgattttgaataccac 23753516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 40897282 - 40897221
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaatacca 216  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||    
T  40897282 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaatacca 40897221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 114 - 216
Target Start/End: Complemental strand, 44276564 - 44276466
Alignment:
Q  114 atgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaata 213  Q
    |||| ||||||||||| |||||| || |||||||||||||||||||||  ||||||   |||||||||||||||||    ||||||||||||||||||||    
T  44276564 atgtcttcatgaaagattttttcttgttaaaatttcactagaaaatcccacaaaatccaatttattaaacaatcct----aatttgaatgattttgaata 44276469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 252
Target Start/End: Original strand, 44906581 - 44906678
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||| |||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||    
T  44906581 aaaattcatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattga 44906678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 36674198 - 36674265
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   ||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  36674198 aaaatccatcaaaatccaatttattaaacaatccttcaaaatttgaatgattttgaataccacaagac 36674265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 217
Target Start/End: Complemental strand, 54628982 - 54628920
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccac 217  Q
    |||||||||||||||   |||||||||||||||||| ||||||||||||||||||||||||||    
T  54628982 aaaatccatcaaaatccaatttattaaacaatcctttgaaatttgaatgattttgaataccac 54628920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 33807680 - 33807733
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttca 150  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  33807680 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttca 33807733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 252
Target Start/End: Complemental strand, 17946426 - 17946329
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||||   |||||||||||||||||| |||||||||||||||||||||| ||| ||||       ||||||| || ||||||||||||    
T  17946426 aaaatccatcaaaatccaatttattaaacaatcctttgaaatttgaatgattttgaatatcacgagactttttttaagtgatgaaaagtcttgattga 17946329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 222
Target Start/End: Original strand, 23535866 - 23535946
Alignment:
Q  142 aaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    ||||||||||||||||||||  | |||| | ||| ||||||| ||||||| ||||||||||||||||||||||||| ||||    
T  23535866 aaaatttcactagaaaatcccactaaatctaattaattaaacgatccttctaaatttgaatgattttgaataccacaagac 23535946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 222
Target Start/End: Original strand, 539476 - 539539
Alignment:
Q  159 tccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||   |||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  539476 tccatcaaaatccaatttattaaataatccttcgaaatttgaatgattttgaataccacaagac 539539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 11431664 - 11431597
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||| ||||||   |||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  11431664 aaaatccaccaaaatccaatttattaaacaatccttcgaaatttaaatgattttgaataccacaagac 11431597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 20833130 - 20833063
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   |||||||||||||||||||  |||||||||||||||||||||||| ||||    
T  20833130 aaaatccatcaaaatccaatttattaaacaatccttccgaatttgaatgattttgaataccacaagac 20833063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 50903308 - 50903375
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   |||||||||||||||||||  |||||||||||||||||||||||| ||||    
T  50903308 aaaatccatcaaaatccaatttattaaacaatccttcttaatttgaatgattttgaataccacaagac 50903375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 52810516 - 52810449
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   ||||||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  52810516 aaaatccatcaaaattcaatttattaaacaatcattcaaaatttgaatgattttgaataccacaagac 52810449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 31646352 - 31646414
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccac 217  Q
    |||||||||||||||   ||| ||||||||||| |||||||||||||||||||||||||||||    
T  31646352 aaaatccatcaaaatccaattcattaaacaatctttcgaaatttgaatgattttgaataccac 31646414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 55235322 - 55235264
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaata 213  Q
    ||||||||||||||    ||||||||||||||| |||||||||||||||||||||||||    
T  55235322 aaaatccatcaaaaaccaatttattaaacaatctttcgaaatttgaatgattttgaata 55235264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 1439894 - 1439958
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc 161  Q
    ||||||||| |||| | |||||||| |||||||||||||||| | ||||||| ||||||||||||    
T  1439894 caatcctaaaaaatctcatgttttcgtgaaagactttttcataccaaaattttactagaaaatcc 1439958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 216
Target Start/End: Original strand, 15492874 - 15492990
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatcc----ttcgaaatttg 199  Q
    ||||||| |||||  ||||||||||| |||||| || |||||||||||||||| ||||  ||||||   |||||||||| ||| |    ||  |||||||    
T  15492874 aagaaatcttatgacttcatgaaagattttttcttgttaaaatttcactagaatatcctacaaaatccaatttattaaataattcttaattaaaaatttg 15492973  T
Q  200 aatgattttgaatacca 216  Q
    |||||||||||||||||    
T  15492974 aatgattttgaatacca 15492990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 45863040 - 45862980
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatc 164  Q
    ||||||| | || |||||||||||||||||||| || ||||||| ||||| ||||||||||    
T  45863040 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccatc 45862980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 12103779 - 12103733
Alignment:
Q  114 atgttttcatgaaagactttttcatgctaaaatttcactagaaaatc 160  Q
    |||| |||||||||||||| ||| || ||||||||||||||||||||    
T  12103779 atgtcttcatgaaagacttattcttgttaaaatttcactagaaaatc 12103733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 98; Significance: 2e-48; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 72 - 252
Target Start/End: Original strand, 40996623 - 40996813
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tcc 161  Q
    ||||||||||||||||||       |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||          |||    
T  40996623 atagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcctacaaaatcc 40996722  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||       ||| |||||||||||||||||||    
T  40996723 atcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagcgattaagagtcttgattga 40996813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 72 - 252
Target Start/End: Original strand, 43581064 - 43581254
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tcc 161  Q
    ||||||||||||||||||        ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||          |||    
T  43581064 atagtaaaatcttaaaagaaaaaaataatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcc 43581163  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  43581164 atcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 43581254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 97 - 252
Target Start/End: Original strand, 7718361 - 7718526
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tccatcaaaatatgatttattaaacaat 186  Q
    |||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||          ||||||||||| ||||||||||||||||    
T  7718361 caatcctaagaaatctcatgttttcatgaaagattttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 7718460  T
Q  187 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  7718461 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 7718526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 72 - 252
Target Start/End: Original strand, 18914709 - 18914899
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tcc 161  Q
    ||||||||||||||||||       |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||          |||    
T  18914709 atagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcc 18914808  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  18914809 atcaaaatctgatttattaaacaaacctttgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 18914899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 72 - 252
Target Start/End: Complemental strand, 30441029 - 30440839
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc---------- 161  Q
    ||||||||||||||||||       |||||||||||||| | ||||||||| ||||||||||||||| ||||||||||||||||||||||              
T  30441029 atagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcacgaaagactttttcatactaaaatttcactagaaaatcccacaaaatcc 30440930  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  30440929 atcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 30440839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 72 - 252
Target Start/End: Complemental strand, 34695506 - 34695316
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc---------- 161  Q
    ||||||||||||||||||       |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||              
T  34695506 atagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcc 34695407  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||       |||||||||||||||||||||||    
T  34695406 atcaaaatctgatttattaaacaatccttcgaaatttgaatggttttgaataccactggactttttttaagtgattaagagtcttgattga 34695316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 72 - 252
Target Start/End: Complemental strand, 973417 - 973227
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc---------- 161  Q
    ||||||||||||||||||       |||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||              
T  973417 atagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcactagaaaatcccacaaaatcc 973318  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |        |||||||||||||||||||||||    
T  973317 atcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactaaattttttttaagtgattaagagtcttgattga 973227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 97 - 252
Target Start/End: Original strand, 7719259 - 7719424
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tccatcaaaatatgatttattaaacaat 186  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||          ||||||||||| ||||||||||||||||    
T  7719259 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 7719358  T
Q  187 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    | |||||||||||||||||||||||||||||||||        |||||||||||||||||||||||    
T  7719359 cattcgaaatttgaatgattttgaataccactagattttttttaagtgattaagagtcttgattga 7719424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 72 - 252
Target Start/End: Complemental strand, 47914499 - 47914309
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc---------- 161  Q
    ||||||||||||||||||       ||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||              
T  47914499 atagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcc 47914400  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||       |||||||||||||||||||||||    
T  47914399 atcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattga 47914309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 97 - 250
Target Start/End: Complemental strand, 12893616 - 12893453
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatc----------catcaaaatatgatttattaaacaat 186  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||          ||||||||| ||||||||||||||||    
T  12893616 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatctcacaaaatccatcaaaatctgatttattaaacaat 12893517  T
Q  187 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgatt 250  Q
     ||||||||||||||||||||||||||||| |||||       |||||||||||||||||||||    
T  12893516 tcttcgaaatttgaatgattttgaataccattagactttttttaagtgattaagagtcttgatt 12893453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 116 - 221
Target Start/End: Complemental strand, 727692 - 727587
Alignment:
Q  116 gttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaatacc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||| |||||||||||||||||||||||     
T  727692 gttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaatact 727593  T
Q  216 actaga 221  Q
    ||||||    
T  727592 actaga 727587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 97 - 252
Target Start/End: Original strand, 44343395 - 44343560
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tccatcaaaatatgatttattaaacaat 186  Q
    |||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||          ||||||||||| ||||||||||||||||    
T  44343395 caatcctaagaaatctcatgttttcgtgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 44343494  T
Q  187 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||||||||||| |||||||||| ||       |||||||||||||||||||||||    
T  44343495 ccttcgaaatttgaatgattttaaataccactaaactttttttaagtgattaagagtcttgattga 44343560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 72 - 252
Target Start/End: Complemental strand, 47879401 - 47879211
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaat----------cc 161  Q
    ||||||||||||||||||       ||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||          ||    
T  47879401 atagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaattccacaaaatcc 47879302  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| ||||||||||||||||||||  ||||||||||||||||||||| ||||||||       |||||||||||||||||||||||    
T  47879301 atcaaaatctgatttattaaacaatccttttaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattga 47879211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 132 - 249
Target Start/End: Complemental strand, 31639038 - 31638921
Alignment:
Q  132 ttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaa 231  Q
    ||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||       ||    
T  31639038 ttttcatgccaaaatttaactagaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaa 31638939  T
Q  232 gtgattaagagtcttgat 249  Q
    ||||||||||||||||||    
T  31638938 gtgattaagagtcttgat 31638921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 98 - 222
Target Start/End: Complemental strand, 19251729 - 19251605
Alignment:
Q  98 aatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatt 197  Q
    ||||| ||||||| | | ||||||||||||||||||||  |||||||||||||| |||||||||||||||||   |||||||||||||||||||||||||    
T  19251729 aatcccaagaaatttcaggttttcatgaaagactttttattgctaaaatttcacaagaaaatccatcaaaatccaatttattaaacaatccttcgaaatt 19251630  T
Q  198 tgaatgattttgaataccactagac 222  Q
    |||||||||||||||||||| ||||    
T  19251629 tgaatgattttgaataccacgagac 19251605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 72 - 252
Target Start/End: Original strand, 20275237 - 20275427
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tcc 161  Q
    ||||||||||||||||||       |||| ||||||||| | ||| |||||||| ||||||||||||||||||||||||||| ||||          |||    
T  20275237 atagtaaaatcttaaaagaaaaaaacaatgctaagaaatctcatgctttcatgacagactttttcatgctaaaatttcactaaaaaatcccacaaaatcc 20275336  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||       |||||||||||||||||||||||    
T  20275337 atcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccataagactttttttaagtgattaagagtcttgattga 20275427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 72 - 252
Target Start/End: Original strand, 39219351 - 39219540
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactag----------aaaatcc 161  Q
    ||||||||||||||||||       |||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||          |||||||    
T  39219351 atagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcc 39219450  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| |||||||||||||||| | || |||||||||||||||||||||||| |||||       |||||||||||||||||||||||    
T  39219451 atcaaaatctgatttattaaacaat-catcaaaatttgaatgattttgaataccaatagactttttttaagtgattaagagtcttgattga 39219540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 97 - 252
Target Start/End: Original strand, 3797066 - 3797221
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaat-ccatcaaaatatgatttattaaacaatccttcgaaa 195  Q
    |||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||| |||    
T  3797066 caatcctaagaaatct-atgttttcttaaaagactttttcatgctaaaatttcactagaaaatcccatcaaaatctaatttattaaacaatccttcaaaa 3797164  T
Q  196 tttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||| |||||| ||||||||||| ||||       ||||||| || ||||||||||||    
T  3797165 ttttaatgatcttgaataccacaagactttttttaagtgatgaaaagtcttgattga 3797221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 9180071 - 9179916
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaat 196  Q
    |||||||||||||| | |||||||||||||||||||||| ||||||||| |||||||||||||||  ||||||   |||||||||||||||||||| |||    
T  9180071 caatcctaagaaatctcatgttttcatgaaagacttttttatgctaaaaattcactagaaaatcccacaaaatccaatttattaaacaatccttcggaat 9179972  T
Q  197 ttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    || | |||||||| ||||||| ||||       ||||||| |||||||||||||||    
T  9179971 ttaagtgattttgtataccacaagactttttttaagtgatgaagagtcttgattga 9179916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 72 - 220
Target Start/End: Complemental strand, 34009246 - 34009088
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaat----------cc 161  Q
    ||||||||||||||||||       |||||||||||||| | |||||||| ||||||||||||| |||||||||||| | ||||||||          ||    
T  34009246 atagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcttgaaagacttttttatgctaaaattttattagaaaattccacaaaatcc 34009147  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactag 220  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34009146 atcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactag 34009088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 97 - 218
Target Start/End: Complemental strand, 7113660 - 7113529
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------atcaaaatatgatttattaaacaat 186  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||  |||||||||||          |||||||| ||||||||||||||||    
T  7113660 caatcctaagaaatttcatgttttcatgaaagactttttcatgctaaaattttcctagaaaatcccacaaaatctatcaaaatctgatttattaaacaat 7113561  T
Q  187 ccttcgaaatttgaatgattttgaataccact 218  Q
    ||| |||||||||||| |||||||||||||||    
T  7113560 cctgcgaaatttgaattattttgaataccact 7113529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 117 - 217
Target Start/End: Original strand, 44121929 - 44122029
Alignment:
Q  117 ttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaatacca 216  Q
    ||||||| |||||||||||| || ||||||| ||||| |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||    
T  44121929 ttttcattaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaatacca 44122028  T
Q  217 c 217  Q
    |    
T  44122029 c 44122029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 97 - 217
Target Start/End: Original strand, 32142916 - 32143046
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tccatcaaaatatgatttattaaacaat 186  Q
    ||||| |||||||| | ||||||| ||| |||||||||||||||||||||||||||||||||          ||||||||||| ||||||||||||||||    
T  32142916 caatcttaagaaatctcatgtttttatggaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 32143015  T
Q  187 ccttcgaaatttgaatgattttgaataccac 217  Q
    ||||| |||||||||||||||||||||||||    
T  32143016 ccttcaaaatttgaatgattttgaataccac 32143046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 252
Target Start/End: Original strand, 40460723 - 40460871
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| | || ||||||||||||| |||||| || ||||||| ||||| |||||||||||||||   ||||||||||||||| |||||||||||||||    
T  40460723 aagaaatctcatattttcatgaaagattttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatcattcgaaatttgaatg 40460822  T
Q  204 attttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||| ||||       ||||||| || ||||||||||||    
T  40460823 attttgaataccacaagactttttttaagtgatgaaaagtcttgattga 40460871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 104 - 222
Target Start/End: Complemental strand, 509840 - 509722
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| | || |||||||||||||||||||| || ||||||  ||||| |||||||||||||||   ||||||||||||||| |||||||||||||||    
T  509840 aagaaatctcatcttttcatgaaagactttttcttgttaaaatcccactacaaaatccatcaaaatccaatttattaaacaatcgttcgaaatttgaatg 509741  T
Q  204 attttgaataccactagac 222  Q
    |||||||||||||| ||||    
T  509740 attttgaataccacaagac 509722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 97 - 222
Target Start/End: Complemental strand, 10068668 - 10068533
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------atcaaaatatgatttattaaacaat 186  Q
    ||||||||| |||| | ||||||| |||||| |||||||||||||||||||||||||||||||||          |||||||| | ||||||||||||||    
T  10068668 caatcctaacaaatctcatgtttttatgaaatactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatttaatttattaaacaat 10068569  T
Q  187 ccttcgaaatttgaatgattttgaataccactagac 222  Q
    ||||| ||||||||||||||||||||||||| ||||    
T  10068568 ccttcaaaatttgaatgattttgaataccacaagac 10068533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 37328108 - 37327993
Alignment:
Q  107 aaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgatt 206  Q
    |||| |||| |||||||||||||||||||  || |||||||  |||| |||||||||||||||   |||||||||||||||||| |||||||||||||||    
T  37328108 aaatcttatcttttcatgaaagacttttttttgttaaaattatactacaaaatccatcaaaattcaatttattaaacaatcctttgaaatttgaatgatt 37328009  T
Q  207 ttgaataccactagac 222  Q
    ||||||||||| ||||    
T  37328008 ttgaataccacaagac 37327993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 127 - 218
Target Start/End: Complemental strand, 43679592 - 43679491
Alignment:
Q  127 agactttttcatgctaaaatttcactagaaaatcc----------atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaatacca 216  Q
    |||||||||||||||||||||||||||||||||||          |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  43679592 agactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaatacca 43679493  T
Q  217 ct 218  Q
    ||    
T  43679492 ct 43679491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 104 - 213
Target Start/End: Complemental strand, 19810983 - 19810874
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| | ||||||||||||||||| |||| ||||||||||||||||||||||| |  ||||||   ||||||||||||||| || ||||||||||||    
T  19810983 aagaaatctcatgttttcatgaaagacatttttatgctaaaatttcactagaaaattccacaaaatccaatttattaaacaatcatttgaaatttgaatg 19810884  T
Q  204 attttgaata 213  Q
    ||||||||||    
T  19810883 attttgaata 19810874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 104 - 216
Target Start/End: Complemental strand, 29585698 - 29585586
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| | || |||| ||||||||||||||| || ||||||| ||||| |||||||||||||||   | ||||||||||||||||| |||||||||||    
T  29585698 aagaaatttcatctttttatgaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaaattattaaacaatccttcaaaatttgaatg 29585599  T
Q  204 attttgaatacca 216  Q
    |||||||||||||    
T  29585598 attttgaatacca 29585586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 252
Target Start/End: Original strand, 33892279 - 33892414
Alignment:
Q  117 ttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaatacca 216  Q
    |||| ||||||||||||||| || ||||||| ||||| ||||| ||| |||||   ||||||| ||||||| ||||||||||||||||||||||||||||    
T  33892279 ttttaatgaaagactttttcttgttaaaattacactacaaaattcataaaaatccaatttatttaacaatcattcgaaatttgaatgattttgaatacca 33892378  T
Q  217 ctagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    | ||||       ||||||| || ||||||||||||    
T  33892379 caagactttgtttaagtgatgaaaagtcttgattga 33892414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 3023059 - 3022992
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3023059 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 3022992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 104 - 216
Target Start/End: Complemental strand, 7993336 - 7993214
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------atcaaaatatgatttattaaacaatccttcga 193  Q
    ||||||| |||| |||||||||||||||||||| || ||||||| ||||| |||||||          ||||||||   |||||||||||||||||||||    
T  7993336 aagaaatcttatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacacaatccatcaaaattcaatttattaaacaatccttcga 7993237  T
Q  194 aatttgaatgattttgaatacca 216  Q
    |||||||||||||||||||||||    
T  7993236 aatttgaatgattttgaatacca 7993214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 12963834 - 12963767
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  12963834 aaaatccatcaaaatctaatttattaaacaatccttcgaaatttgaatgattttggataccacgagac 12963767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 23101431 - 23101364
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23101431 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 23101364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 28342480 - 28342413
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  28342480 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 28342413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 104 - 252
Target Start/End: Original strand, 46405447 - 46405595
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| | || |||| || ||| |||||||| || ||||||| ||| | |||||||||||||||   ||||||||||||||| || ||||||||||||    
T  46405447 aagaaatctcatctttttattaaatactttttcttgttaaaattacaccacaaaatccatcaaaatccaatttattaaacaatcatttgaaatttgaatg 46405546  T
Q  204 attttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||| ||||       ||||||| || ||||||||||||    
T  46405547 attttgaataccacaagactttttttaagtgatgaaaagtcttgattga 46405595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 117 - 252
Target Start/End: Complemental strand, 39028268 - 39028133
Alignment:
Q  117 ttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaatacca 216  Q
    ||||||||||| |||||||| || |||| || ||||| |||||||||||||||   ||||||||||||||| |||| |||||||| ||||||||||| ||    
T  39028268 ttttcatgaaaaactttttcttgttaaagttacactacaaaatccatcaaaatccaatttattaaacaatctttcgtaatttgaacgattttgaataaca 39028169  T
Q  217 ctagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    | ||||       ||||||| || ||||||||||||    
T  39028168 caagactttttttaagtgatgaaaagtcttgattga 39028133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 107 - 250
Target Start/End: Original strand, 44623295 - 44623438
Alignment:
Q  107 aaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgatt 206  Q
    |||||| || |||| |||| |||||||||||| |||||||||||||||||||| |  ||||||   |||||||||||| || || ||||| |||||||||    
T  44623295 aaatatcatatttttatgagagactttttcattctaaaatttcactagaaaattccacaaaattcaatttattaaacagtctttagaaatatgaatgatt 44623394  T
Q  207 ttgaataccactagacnnnnnnnaagtgattaagagtcttgatt 250  Q
    ||||||| ||| ||||       ||||||| |||||||||||||    
T  44623395 ttgaatatcacgagacctttttaaagtgatgaagagtcttgatt 44623438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 252
Target Start/End: Original strand, 9882303 - 9882400
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||||   ||||||||||||||| ||||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||    
T  9882303 aaaatccatcaaaatccaatttattaaacaatcattcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattga 9882400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 18838522 - 18838455
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   ||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  18838522 aaaatccatcaaaatccaatttattaaacaatctttcgaaatttgaatgattttgaataccacaagac 18838455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 29614831 - 29614898
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  29614831 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaatatcacaagac 29614898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 39784232 - 39784165
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   |||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  39784232 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttaaatgattttgaataccacaagac 39784165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 217
Target Start/End: Original strand, 17001049 - 17001152
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| | || |||||||||||||||||||| || || |||| ||||| ||||||||          |||||||||||||||||||||||||||||||    
T  17001049 aagaaatctcatattttcatgaaagactttttcttgttataattacactacaaaatcca----------atttattaaacaatccttcgaaatttgaatg 17001138  T
Q  204 attttgaataccac 217  Q
    ||||||||||||||    
T  17001139 attttgaataccac 17001152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 43187356 - 43187485
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------atcaaaatatgatttattaaacaat 186  Q
    |||||| || |||| | |||| |||||||||||||||||| || |||||||||||||||||||||          ||||||||   ||||||||||||||    
T  43187356 caatcccaaaaaatctcatgtcttcatgaaagactttttcttgttaaaatttcactagaaaatccgacaaaattcatcaaaatccaatttattaaacaat 43187455  T
Q  187 ccttcgaaatttgaatgattttgaatacca 216  Q
     |||| ||||||||||||||||||||||||    
T  43187456 gcttcaaaatttgaatgattttgaatacca 43187485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 33382770 - 33382709
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaatacca 216  Q
    |||||||||||||||   |||||||||||||||||||||||||| |||||||||||||||||    
T  33382770 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttaaatgattttgaatacca 33382709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 47066819 - 47066770
Alignment:
Q  173 atttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  47066819 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 47066770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 252
Target Start/End: Complemental strand, 8675466 - 8675369
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||||   |||||||||||||||||||||| ||| |||||||||||||||||| ||||       ||||||| || ||||||||||||    
T  8675466 aaaatccatcaaaatccaatttattaaacaatccttcgaagtttaaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattga 8675369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 252
Target Start/End: Original strand, 28034872 - 28034969
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||||   |||||||||||||||||| ||||||||||| |||||||||||||| ||||       ||||||| || ||||||||||||    
T  28034872 aaaatccatcaaaatccaatttattaaacaatcctttgaaatttgaataattttgaataccacaagactttttttaagtgatgaaaagtcttgattga 28034969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 10676487 - 10676546
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaatac 214  Q
    |||||||||| ||||   ||||||||||||||||||||||||||||||||||||||||||    
T  10676487 aaaatccatccaaatccaatttattaaacaatccttcgaaatttgaatgattttgaatac 10676546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 217
Target Start/End: Complemental strand, 25805825 - 25805763
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccac 217  Q
    ||||||||||| |||   ||||||||||||||||| |||||||||||||||||||||||||||    
T  25805825 aaaatccatcataattcaatttattaaacaatcctacgaaatttgaatgattttgaataccac 25805763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 222
Target Start/End: Complemental strand, 32883914 - 32883848
Alignment:
Q  156 aaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    ||||||||||||||   ||||| ||||||||| ||||||||||||||||||||||||||||| ||||    
T  32883914 aaatccatcaaaatccaatttaataaacaatcattcgaaatttgaatgattttgaataccacaagac 32883848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 12740488 - 12740439
Alignment:
Q  173 atttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  12740488 atttattaaacaatcctttgaaatttgaatgattttgaataccacgagac 12740439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 44256851 - 44256895
Alignment:
Q  173 atttattaaacaatccttcgaaatttgaatgattttgaataccac 217  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  44256851 atttattaaacaatcattcgaaatttgaatgattttgaataccac 44256895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 447913 - 447854
Alignment:
Q  158 atccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccac 217  Q
    ||||||||||||   ||| ||||||||||| |||||||||||||||||||| ||||||||    
T  447913 atccatcaaaatccaattaattaaacaatcattcgaaatttgaatgattttaaataccac 447854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 37972934 - 37972981
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaat 202  Q
    |||||||||||||||   |||||||||| |||||||||||||||||||    
T  37972934 aaaatccatcaaaatccaatttattaaataatccttcgaaatttgaat 37972981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 12963874 - 12963838
Alignment:
Q  125 aaagactttttcatgctaaaatttcactagaaaatcc 161  Q
    |||||||||||| | ||||||||||||||||||||||    
T  12963874 aaagactttttcttactaaaatttcactagaaaatcc 12963838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 37972886 - 37972930
Alignment:
Q  117 ttttcatgaaagactttttcatgctaaaatttcactagaaaatcc 161  Q
    |||||||||||||||||||| || ||||||| ||||| |||||||    
T  37972886 ttttcatgaaagactttttcttgttaaaattacactataaaatcc 37972930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 2e-48; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 21147274 - 21147109
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------atcaaaatatgatttattaaacaat 186  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||          |||||||| ||||||||||||||||    
T  21147274 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 21147175  T
Q  187 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  21147174 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 21147109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 72 - 252
Target Start/End: Original strand, 7016713 - 7016903
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tcc 161  Q
    ||||||||||||||||||       |||| ||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||          |||    
T  7016713 atagtaaaatcttaaaagaaaaaaacaattctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcc 7016812  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  7016813 atcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 7016903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 97 - 252
Target Start/End: Original strand, 33656040 - 33656205
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tccatcaaaatatgatttattaaacaat 186  Q
    |||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||          ||||||||||| ||||||||||||||||    
T  33656040 caatcctaagaaatctcatattttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 33656139  T
Q  187 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||||||||||||||||||| ||||        |||||||||||||||||||||||    
T  33656140 ccttcgaaatttgaatgattttgaataccattagattttttttaagtgattaagagtcttgattga 33656205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 117 - 252
Target Start/End: Complemental strand, 849334 - 849189
Alignment:
Q  117 ttttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------atcaaaatatgatttattaaacaatccttcgaaatttgaatgatt 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||          |||||||| ||||||||||||||||||||||||||||||||||||    
T  849334 ttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatctatcaaaatctgatttattaaacaatccttcgaaatttgaatgatt 849235  T
Q  207 ttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||| |||||       |||||||||||||||||||||||    
T  849234 ttgaataccattagactttttttaagtgattaagagtcttgattga 849189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 72 - 252
Target Start/End: Original strand, 27458924 - 27459113
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactag----------aaaatcc 161  Q
    ||||||||||||||||||       |||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||          |||||||    
T  27458924 atagtaaaatcttaaaagaaaaaaacaatcctaagaaatatcatgttttcatgaatgattttttcatgctaaaatttcactagaaaatcccacaaaatcc 27459023  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| | ||||||||||||||||||| |||| |||||||||||||||||||||||||       |||||||||||||||||||||||    
T  27459024 atcaaaatctaatttattaaacaatccttcaaaatctgaatgattttgaataccactagac-ttttttaagtgattaagagtcttgattga 27459113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 103 - 252
Target Start/End: Original strand, 5272924 - 5273083
Alignment:
Q  103 taagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tccatcaaaatatgatttattaaacaatccttcg 192  Q
    |||||||| | ||||||| |||||||||||||||||||||||||||||||||||||          ||||||||||| ||||||||||||||||| ||||    
T  5272924 taagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcattcg 5273023  T
Q  193 aaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||||||||||||||||||||||||       || ||||||||||||||||||||    
T  5273024 aaatttgaatgattttgaataccactagactttttttaaatgattaagagtcttgattga 5273083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 104 - 217
Target Start/End: Complemental strand, 5949298 - 5949185
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| | || |||||||||||||||||||| || ||||||| ||||| |||||||||||||||   |||||||||||||||||||||||||||||||    
T  5949298 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatg 5949199  T
Q  204 attttgaataccac 217  Q
    ||||||||||||||    
T  5949198 attttgaataccac 5949185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 119 - 252
Target Start/End: Original strand, 4240483 - 4240616
Alignment:
Q  119 ttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccact 218  Q
    |||||||||||||||||| || ||||||| ||||| |||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||     
T  4240483 ttcatgaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccaca 4240582  T
Q  219 agacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||       ||||||| || ||||||||||||    
T  4240583 agactttttttaagtgatgaaaagtcttgattga 4240616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 103 - 252
Target Start/End: Complemental strand, 139474 - 139315
Alignment:
Q  103 taagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcca----------tcaaaatatgatttattaaacaatccttcg 192  Q
    |||||||| | ||||||| |||||||||||||||||  |||||||||||| |||||||||          ||||||| || |||||||||||||||||||    
T  139474 taagaaatctcatgtttttatgaaagactttttcatattaaaatttcactggaaaatccaacaaaatccatcaaaatctggtttattaaacaatccttcg 139375  T
Q  193 aaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||||||||||||||||||||||||       |||||||||| ||||||||||||    
T  139374 aaatttgaatgattttgaataccactagactttttttaagtgattaaaagtcttgattga 139315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 97 - 252
Target Start/End: Original strand, 9220716 - 9220871
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaat 196  Q
    |||||||||||||||| ||||||||| ||||||||||||| || |||||||| |||| |||||||  |||| | | ||| |||||||||||||| |||||    
T  9220716 caatcctaagaaatatcatgttttcacgaaagactttttcgtgttaaaattttactataaaatcctacaaattctaattcattaaacaatccttagaaat 9220815  T
Q  197 ttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||||||||||| ||  ||||       ||||||| |||||||||||||||    
T  9220816 ttgaatgattttgaatatcataagactttttttaagtgataaagagtcttgattga 9220871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 104 - 213
Target Start/End: Original strand, 1461154 - 1461263
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| | || ||||||||||||| |||||| || ||||||| || || |||||||||||||||   |||||||||||||||||||||||||||||||    
T  1461154 aagaaatctcatcttttcatgaaagattttttcttgttaaaattacagtacaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatg 1461253  T
Q  204 attttgaata 213  Q
    ||||||||||    
T  1461254 attttgaata 1461263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 104 - 213
Target Start/End: Original strand, 40013718 - 40013827
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| | || |||||||||||||||||||| || ||||||| ||||| ||||||||| |||||   ||| |||||||||||||||||||||||||||    
T  40013718 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccattaaaatccaattgattaaacaatccttcgaaatttgaatg 40013817  T
Q  204 attttgaata 213  Q
    ||||||||||    
T  40013818 attttgaata 40013827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 155 - 252
Target Start/End: Complemental strand, 6460931 - 6460834
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||        || ||||||||||||||||||||    
T  6460931 aaaatccatcaaaatctgatttattaaacaaaccttcgaaatttgaatgattttgaataccactagattttttttaaatgattaagagtcttgattga 6460834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 222
Target Start/End: Original strand, 32157868 - 32158031
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagact---ttttcatgctaaaatttcactagaaaatcca------ 162  Q
    ||||||||||||||||||       ||||  |||||||| | ||||||||||||||||||   ||||| ||||||||||| ||||||||||||           
T  32157868 atagtaaaatcttaaaagaaaagaacaattttaagaaatctcatgttttcatgaaagactattttttcgtgctaaaattttactagaaaatcccacaaaa 32157967  T
Q  163 ----tcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
        ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32157968 tccgtcaaaatctaatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 32158031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 97 - 222
Target Start/End: Complemental strand, 22746496 - 22746369
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttca--ctagaaaatccatcaaaatatgatttattaaacaatccttcgaa 194  Q
    ||||| |||||||| |||| ||||||||||||| |||||| || ||||||| ||  | | |||||||||||||||   ||||||||||||||| ||||||    
T  22746496 caatcttaagaaatcttatcttttcatgaaagagtttttcttgttaaaattacatcccacaaaatccatcaaaattcaatttattaaacaatcattcgaa 22746397  T
Q  195 atttgaatgattttgaataccactagac 222  Q
    ||||||||||||||||||| ||| ||||    
T  22746396 atttgaatgattttgaatatcacaagac 22746369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 252
Target Start/End: Original strand, 4550324 - 4550421
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||    
T  4550324 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattga 4550421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 13926070 - 13926003
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13926070 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 13926003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 252
Target Start/End: Original strand, 1152170 - 1152267
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||||   |||||||||||||||| |||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||    
T  1152170 aaaatccatcaaaatccaatttattaaacaatccctcgaaatttgaatgattttgaataccacaagactttttttaagtgataaaaagtcttgattga 1152267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 252
Target Start/End: Original strand, 14465294 - 14465391
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||| |||||||||  |||||||||||||||| ||||||||||||||||||||||||||||| ||||       ||| ||| |||||||||||||||    
T  14465294 aaaattcatcaaaatccgatttattaaacaatctttcgaaatttgaatgattttgaataccacaagactttttttaagcgatgaagagtcttgattga 14465391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 14000172 - 14000239
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   ||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  14000172 aaaatccatcaaaatccaatttattaaacaatccttcaaaatttgaatgattttgaataccacaagac 14000239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 39852484 - 39852417
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   ||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  39852484 aaaatccatcaaaatccaatttagtaaacaatccttcgaaatttgaatgattttgaataccacaagac 39852417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 7947640 - 7947698
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaata 213  Q
    |||||||||||||||   |||||||||||||||||||||||||||||||||||||||||    
T  7947640 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaata 7947698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 9689864 - 9689700
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatc----------catcaaaatatgatttattaaacaat 186  Q
    ||||| |||||||| ||||||||| |||||||||||||||||  |||||||| || ||||||||          ||||||||| | |||||| |||||||    
T  9689864 caatcataagaaatcttatgtttttatgaaagactttttcataataaaattttacaagaaaatctcacacaatccatcaaaatctaatttatcaaacaat 9689765  T
Q  187 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    | |||||||||| ||||||||| |||||||| ||||       ||||||| |||||||||||||||    
T  9689764 cattcgaaattt-aatgattttaaataccacaagactttttttaagtgatgaagagtcttgattga 9689700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 37014035 - 37013993
Alignment:
Q  173 atttattaaacaatccttcgaaatttgaatgattttgaatacc 215  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  37014035 atttattaaacaacccttcgaaatttgaatgattttgaatacc 37013993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 2e-48; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 72 - 252
Target Start/End: Complemental strand, 16269924 - 16269734
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc---------- 161  Q
    ||||||||||||||||||       |||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||              
T  16269924 atagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactataaaatcccacaaaatcc 16269825  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  16269824 atcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 16269734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 72 - 252
Target Start/End: Complemental strand, 20605469 - 20605279
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc---------- 161  Q
    ||||||||||||||||||       |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||              
T  20605469 atagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcc 20605370  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||    
T  20605369 atcaaaatctgatttattaaacaatccttcgaaattttaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 20605279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 24776563 - 24776398
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------atcaaaatatgatttattaaacaat 186  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||          |||||||| ||||||||||||||||    
T  24776563 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 24776464  T
Q  187 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  24776463 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 24776398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 72 - 252
Target Start/End: Original strand, 31170601 - 31170791
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tcc 161  Q
    ||||||||||||||||||       |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||          |||    
T  31170601 atagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcc 31170700  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  31170701 atcaaaatctgatttattaaacaatccttggaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 31170791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 72 - 252
Target Start/End: Complemental strand, 35317295 - 35317105
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaat----------cc 161  Q
    ||||||||||||||||||       ||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||          ||    
T  35317295 atagtaaaatcttaaaagaaaaaaacaatgttaagaaatcttatgttttcatgaaagactttttcatgctaaaatttcactagaaaattccacaaaatcc 35317196  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  35317195 atcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 35317105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 72 - 252
Target Start/End: Original strand, 14198554 - 14198744
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tcc 161  Q
    ||||||||||||||||||       |||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||          |||    
T  14198554 atagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagaatttttcatgctaaaatttcactagaaaatcccacaaaatcc 14198653  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||       |||||||||||||||||||||||    
T  14198654 atcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactggactttttttaagtgattaagagtcttgattga 14198744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 72 - 252
Target Start/End: Complemental strand, 43847879 - 43847689
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaat----------cc 161  Q
    ||||||||||||||||||       |||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||          ||    
T  43847879 atagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgacagactttttcatgctaaaatttcactagaaaattccacaaaatcc 43847780  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||       |||||||||||||||||||||||    
T  43847779 atcaaattctgatttattaaacaatccttcgaaatttgaatgattttgaatacaactagactttttttaagtgattaagagtcttgattga 43847689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 72 - 252
Target Start/End: Original strand, 305442 - 305632
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatc----------c 161  Q
    ||||||||||||||||||       |||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||          |    
T  305442 atagtaaaatcttaaaagaaataaacaatcctaagaaatctcatgttttcatgaaagactttttcattctaaaatttcactagaaaatctcacaaaatcc 305541  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||| |||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  305542 atcgaaatctgatttattaaacaatcattcaaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 305632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 72 - 252
Target Start/End: Complemental strand, 12407613 - 12407423
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc---------- 161  Q
    ||||||||||||||||||       ||||| |||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||              
T  12407613 atagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatggtaaaatttcactagaaaatcccacaaaatcc 12407514  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||       |||||||||||||||| ||||||    
T  12407513 atcaaaatctgatttattaaacaatccttcaaaatttgaatgattttgaataccactagactttttttaagtgattaagagtctcgattga 12407423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 97 - 252
Target Start/End: Original strand, 5093049 - 5093214
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tccatcaaaatatgatttattaaacaat 186  Q
    |||||||||||||| | ||||||| ||||||||||||||||||||||||||||| |||||||          ||||||||||| ||||||||||||||||    
T  5093049 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 5093148  T
Q  187 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||| |||||||||||||||||||||| |||||||       ||||||||||| |||||||||||    
T  5093149 ccttcaaaatttgaatgattttgaatactactagactttttttaagtgattaagcgtcttgattga 5093214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 117 - 252
Target Start/End: Complemental strand, 1789630 - 1789485
Alignment:
Q  117 ttttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------atcaaaatatgatttattaaacaatccttcgaaatttgaatgatt 206  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||          |||||||| ||||||||||||||||||||||||||||||||||||    
T  1789630 ttttgatgaaagactttttcatgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgatt 1789531  T
Q  207 ttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||||||||||       |||||||||||||| ||||||||    
T  1789530 ttgaataccactagactttttttaagtgattaagagttttgattga 1789485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 72 - 252
Target Start/End: Original strand, 22551740 - 22551930
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactag----------aaaatcc 161  Q
    ||||||||||||||||||       ||||| |||||||| | |||||||||||||| ||||||||||||||||||||||||||          |||||||    
T  22551740 atagtaaaatcttaaaaggaaaaaacaatcataagaaatctcatgttttcatgaaatactttttcatgctaaaatttcactagaaaatcccacaaaatcc 22551839  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| | ||||| ||||||||| |||||||||||||| |||||||||||||||||||       |||||||||| ||||||||||||    
T  22551840 atcaaaatttaatttaataaacaatcattcgaaatttgaataattttgaataccactagactttttttaagtgattaaaagtcttgattga 22551930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 103 - 218
Target Start/End: Complemental strand, 32125455 - 32125330
Alignment:
Q  103 taagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------atcaaaatatgatttattaaacaatccttcg 192  Q
    |||||||| | || |||||||||||||||||||||||||||||||| ||||||||||||          |||||||| ||||||||||||||||||||||    
T  32125455 taagaaatctcatattttcatgaaagactttttcatgctaaaattttactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 32125356  T
Q  193 aaatttgaatgattttgaataccact 218  Q
    ||||||||||||||||||||||||||    
T  32125355 aaatttgaatgattttgaataccact 32125330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 252
Target Start/End: Original strand, 28740302 - 28740450
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| | || |||| ||||||||||||||| || ||||||| ||| | |||||||||||||||   |||||||||||||||||||||||||||||||    
T  28740302 aagaaatctcatctttttatgaaagactttttcttgttaaaattacaccacaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatg 28740401  T
Q  204 attttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||| ||||       ||||||| || ||||||||||||    
T  28740402 attttgaataccacaagactttttttaagtgatgaaaagtcttgattga 28740450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 124 - 222
Target Start/End: Complemental strand, 7026775 - 7026677
Alignment:
Q  124 gaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    ||||||||||||| || ||||||| ||||| |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7026775 gaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 7026677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 104 - 222
Target Start/End: Complemental strand, 3463863 - 3463745
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| | || |||||||||||||||||||| || ||||||| ||||| |||||||||||||||   |||||||||||||||||| |||| |||||||    
T  3463863 aagaaatctcatattttcatgaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatcctttgaaaattgaatg 3463764  T
Q  204 attttgaataccactagac 222  Q
    ||||| |||||||| ||||    
T  3463763 attttaaataccacaagac 3463745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 113 - 252
Target Start/End: Original strand, 26601229 - 26601367
Alignment:
Q  113 tatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaat 212  Q
    ||||||||||| ||| ||||||  ||| |||| ||||||||||||||||  |||||| ||||||||||||||| | ||||||||||||||||||||||||    
T  26601229 tatgttttcatcaaaaactttta-atgttaaagtttcactagaaaatcccacaaaatctgatttattaaacaaacattcgaaatttgaatgattttgaat 26601327  T
Q  213 accactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||  |||       |||||||||||||||||||||||    
T  26601328 accacgtgactttttttaagtgattaagagtcttgattga 26601367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 72 - 252
Target Start/End: Complemental strand, 9120359 - 9120169
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaa----------atcc 161  Q
    ||||||||||||||||||       |||||||||||||| | |||||||||||||||| |||| ||| ||||||||||||||||||          ||||    
T  9120359 atagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagatttttccatactaaaatttcactagaaaatcccacaaaatcc 9120260  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| | ||||||||||||||||||  |||| |||||||||||||||| |||||||        |||||||||||| ||||||||||    
T  9120259 atcaaaatctaatttattaaacaatcctttaaaatctgaatgattttgaatatcactagattttttttaagtgattaagaatcttgattga 9120169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 97 - 213
Target Start/End: Original strand, 10125302 - 10125418
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaat 196  Q
    ||||| |||||||| |  |||||| ||||||||||||||| || ||||||||||||| |||||||  ||||||   |||||||||||||||||| |||||    
T  10125302 caatcttaagaaatctcgtgtttttatgaaagactttttcttgttaaaatttcactaaaaaatcccacaaaattcaatttattaaacaatcctttgaaat 10125401  T
Q  197 ttgaatgattttgaata 213  Q
    |||||||||||||||||    
T  10125402 ttgaatgattttgaata 10125418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 155 - 252
Target Start/End: Complemental strand, 44765915 - 44765818
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||       |||||||||||||||| ||||||    
T  44765915 aaaatccatcaaaatcttatttattaaacaatctttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtctcgattga 44765818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 120 - 216
Target Start/End: Original strand, 13833457 - 13833553
Alignment:
Q  120 tcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaatacca 216  Q
    ||||||||||||||||| || ||||||| ||||| |||||||  ||||||   ||||||||||||||||||| ||||||||||||||||||||||||    
T  13833457 tcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcaaaatttgaatgattttgaatacca 13833553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 155 - 252
Target Start/End: Complemental strand, 28844695 - 28844598
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||    
T  28844695 aaaatccatcaaaatctaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattga 28844598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 379115 - 379016
Alignment:
Q  117 ttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaatacca 216  Q
    |||||||||| || |||||| || ||||||| ||||| |||||| ||||||||   ||||||||||||||||||| ||||||||||||||||||||||||    
T  379115 ttttcatgaacgattttttcttgttaaaattacactacaaaatctatcaaaatccaatttattaaacaatccttcaaaatttgaatgattttgaatacca 379016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 252
Target Start/End: Complemental strand, 33135763 - 33135666
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||    
T  33135763 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacgagactttttttaagtgatgaaaagtcttgattga 33135666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 252
Target Start/End: Complemental strand, 10657546 - 10657449
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||||   ||||||||||||||| ||||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||    
T  10657546 aaaatccatcaaaatccaatttattaaacaatcattcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattga 10657449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 26788926 - 26788859
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   ||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  26788926 aaaatccatcaaaatccaatttattaaacaatccttcaaaatttgaatgattttgaataccacaagac 26788859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 217
Target Start/End: Complemental strand, 18177407 - 18177345
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccac 217  Q
    |||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||||||    
T  18177407 aaaatccatcaaaatccaattaattaaacaatccttcgaaatttgaatgattttgaataccac 18177345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 217
Target Start/End: Complemental strand, 25288299 - 25288237
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccac 217  Q
    ||||| |||||||||   |||||||||||||||||||||||||||||||||||||||||||||    
T  25288299 aaaattcatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 25288237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 222
Target Start/End: Original strand, 6224576 - 6224684
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| | || |||||||||||||||||||| || ||||||| ||||| ||||||||          |||||||||| |||||||||||||||||||     
T  6224576 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcca----------atttattaaataatccttcgaaatttgaata 6224665  T
Q  204 attttgaataccactagac 222  Q
    |||||||||||||| ||||    
T  6224666 attttgaataccacaagac 6224684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 173 - 252
Target Start/End: Complemental strand, 3574969 - 3574890
Alignment:
Q  173 atttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||       ||||||| || ||||||||||||    
T  3574969 atttattaaacaatccttcgaaatttgaatgattttgaatatcacaagactttttttaagtgatgaaaagtcttgattga 3574890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 205
Target Start/End: Complemental strand, 43078764 - 43078653
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaat--atg--------atttattaaacaatccttcga 193  Q
    ||||||| |||| |||| |||||||||||||||||| ||||||| ||||| |||||||  ||||||  |||        ||||||||||||||| |||||    
T  43078764 aagaaatcttatctttttatgaaagactttttcatgttaaaattacactataaaatcccacaaaatccatgaaaatccaatttattaaacaatcattcga 43078665  T
Q  194 aatttgaatgat 205  Q
    ||||||||||||    
T  43078664 aatttgaatgat 43078653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 21370638 - 21370687
Alignment:
Q  173 atttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||| ||||||| |||| ||||||||||||||||||||||||| ||||    
T  21370638 atttatcaaacaatacttcaaaatttgaatgattttgaataccacaagac 21370687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 215320 - 215392
Alignment:
Q  180 aaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||       ||||||| || ||||||||||||    
T  215320 aaacaatcctttgaagtttgaatgattttgaataccacgagactttttttaagtgatgaaaagtcttgattga 215392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 72 - 252
Target Start/End: Original strand, 38580 - 38769
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc---------- 161  Q
    ||||||||||||||||||       |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||              
T  38580 atagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcc 38679  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  38680 atcaaaatctgatt-attaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 38769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 2e-45; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 72 - 218
Target Start/End: Original strand, 49198244 - 49198400
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactag----------aaaatcc 161  Q
    ||||||||||||||||||       |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||          |||||||    
T  49198244 atagtaaaatcttaaaagaaaaaaacaatcctaagaaatatcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcc 49198343  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccact 218  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  49198344 atcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccact 49198400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 72 - 250
Target Start/End: Original strand, 19451783 - 19451971
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tcc 161  Q
    ||||||||||||||||||       ||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||          |||    
T  19451783 atagtaaaatcttaaaagaaaaaaacaatcataagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcc 19451882  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgatt 250  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||    
T  19451883 atcaaaatctgatttattaaacgatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgatt 19451971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 72 - 252
Target Start/End: Complemental strand, 21222372 - 21222182
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc---------- 161  Q
    ||||||||||||||||||       |||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||              
T  21222372 atagtaaaatcttaaaagaaaataacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactaaaaaatcccacaaaatcc 21222273  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||       |||||||||||||||||||||||    
T  21222272 atcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaatacctctagactttttttaagtgattaagagtcttgattga 21222182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 72 - 252
Target Start/End: Original strand, 45759984 - 45760174
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tcc 161  Q
    ||||||||||||||||||       |||||||||||||| | |||||||||| ||| ||||||||||||||||||||||||||||||          |||    
T  45759984 atagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatcaaatactttttcatgctaaaatttcactagaaaatcccacaaaatcc 45760083  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  45760084 atcaaaatctgatttattaaacaatccttcgaagtttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 45760174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 72 - 252
Target Start/End: Original strand, 50192525 - 50192716
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tcc 161  Q
    ||||||||||||||||||       ||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||          |||    
T  50192525 atagtaaaatcttaaaagaaaaaaacaatcctaaaaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcc 50192624  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||        |||||||||||||||||||||||    
T  50192625 atcaaaatctgatttattaaacaatccttcaaaatttgaatgattttgaataccactagacttttttttaagtgattaagagtcttgattga 50192716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 97 - 222
Target Start/End: Original strand, 6304252 - 6304387
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tccatcaaaatatgatttattaaacaat 186  Q
    ||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||          ||||||||||| ||||||||||||||||    
T  6304252 caatcataagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 6304351  T
Q  187 ccttcgaaatttgaatgattttgaataccactagac 222  Q
    ||||||||||||||||||||||||||||||||||||    
T  6304352 ccttcgaaatttgaatgattttgaataccactagac 6304387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 97 - 222
Target Start/End: Complemental strand, 33025703 - 33025578
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaat 196  Q
    ||||| |||||||| | ||||||||||||||||||||||||||||||||||| | ||||||||||  |||||| |||| |||||||||||||||| ||||    
T  33025703 caatcataagaaatctcatgttttcatgaaagactttttcatgctaaaattttattagaaaatcccacaaaatctgatgtattaaacaatccttcaaaat 33025604  T
Q  197 ttgaatgattttgaataccactagac 222  Q
    ||||||||||||||||||||| ||||    
T  33025603 ttgaatgattttgaataccacaagac 33025578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 97 - 252
Target Start/End: Original strand, 35679128 - 35679293
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaat----------ccatcaaaatatgatttattaaacaat 186  Q
    ||||| |||||||| | |||| |||||||||||||||||||||||||||||||||||||||||          |||||||||| ||||||||||||||||    
T  35679128 caatcttaagaaatctcatgtcttcatgaaagactttttcatgctaaaatttcactagaaaatcccatcaaatccatcaaaatctgatttattaaacaat 35679227  T
Q  187 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||||||||||||||||||||  |||       |||||||||||||||||||||||    
T  35679228 ccttcgaaatttgaatgattttgaataccacatgactttttttaagtgattaagagtcttgattga 35679293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 72 - 222
Target Start/End: Original strand, 47654326 - 47654486
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tcc 161  Q
    ||||||||||||||||||       |||||||||||||| | |||||||||||||| ||||||||||||||||||||| ||||||||          |||    
T  47654326 atagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaatactttttcatgctaaaatttccctagaaaattccacaaaatcc 47654425  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  47654426 atcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagac 47654486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 116 - 252
Target Start/End: Complemental strand, 45536125 - 45535979
Alignment:
Q  116 gttttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------atcaaaatatgatttattaaacaatccttcgaaatttgaatgat 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||          |||||||| ||||||||||||||||| |||||||||||||||||    
T  45536125 gttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatctttcgaaatttgaatgat 45536026  T
Q  206 tttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||||||       ||| |||||||||||||||||||    
T  45536025 tttgaataccactagactttttttaagcgattaagagtcttgattga 45535979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 35279872 - 35279707
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------atcaaaatatgatttattaaacaat 186  Q
    |||| ||||||||| | |||||||||||||||||||||||||| | |||||||||||||||||||          |||||||| ||||||||||||||||    
T  35279872 caattctaagaaatctcatgttttcatgaaagactttttcatgttgaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 35279773  T
Q  187 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||| |||||||||||||||||||||||       |||||||||| ||||||||||||    
T  35279772 ccttcgaaatttaaatgattttgaataccactagactttttttaagtgattaatagtcttgattga 35279707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 133 - 214
Target Start/End: Complemental strand, 955904 - 955823
Alignment:
Q  133 tttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaatac 214  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  955904 tttcatgctaaaatttcactagaaaatccatcaaaatctgatttattaaacaacccttcgaaatttgaatgattttgaatac 955823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 72 - 252
Target Start/End: Original strand, 28824348 - 28824537
Alignment:
Q  72 atagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc---------- 161  Q
    ||||||||||||||||||       |||||||||||||| | ||||||| || ||||||||||||||| ||||||||| |||||||||||              
T  28824348 atagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgtttttataaaagactttttcatgttaaaatttccctagaaaatcccacaaaatcc 28824447  T
Q  162 atcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||    
T  28824448 atcaaaatctgatttattaaacaatc-ttcgaaatttgaatgattttgaataccacaagactgtttttaagtgattaagagtcttgattga 28824537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 73 - 252
Target Start/End: Complemental strand, 47780935 - 47780746
Alignment:
Q  73 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------a 162  Q
    |||||||||||||||||       ||||| |||||||| | |||||||||||||| ||||||||||| |||||||||||||||||||||          |    
T  47780935 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaaaactttttcatgttaaaatttcactagaaaatcccacaaaatcca 47780836  T
Q  163 tcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||| ||||||||||||||||||||  || |||||||||||||||||| ||||||||       |||||||||||||||||||||||    
T  47780835 tcaaaatctgatttattaaacaatccttttaattttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattga 47780746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 102 - 252
Target Start/End: Complemental strand, 49418279 - 49418119
Alignment:
Q  102 ctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------atcaaaatatgatttattaaacaatccttc 191  Q
    ||||||||| | || ||||||||||||| |||||||||||||||||||| ||||||||||          |||||||| ||||||||||||||||||||     
T  49418279 ctaagaaatctcatattttcatgaaagattttttcatgctaaaatttcaatagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttt 49418180  T
Q  192 gaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||| |||||    
T  49418179 gaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttaattga 49418119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 114 - 252
Target Start/End: Original strand, 32588970 - 32589118
Alignment:
Q  114 atgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    |||||||||||||||||||||| ||||||||||||||||||||||          |||||||||||  |||||||||||||||||||| |||||||||||    
T  32588970 atgttttcatgaaagacttttttatgctaaaatttcactagaaaatctcacaaaatccatcaaaatccgatttattaaacaatccttcaaaatttgaatg 32589069  T
Q  204 attttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||| ||||       ||||||| |||||||||||||||    
T  32589070 attttgaataccacaagacttcttttaagtgatgaagagtcttgattga 32589118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 104 - 222
Target Start/End: Original strand, 38536106 - 38536224
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| | || |||||||||||||||||||| || ||||||| ||||| |||||||||||||||   |||||||||||||||||| |||||||||||     
T  38536106 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatcctttgaaatttgaata 38536205  T
Q  204 attttgaataccactagac 222  Q
    |||||||||||||| ||||    
T  38536206 attttgaataccacaagac 38536224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 104 - 222
Target Start/End: Original strand, 38558324 - 38558442
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| | || |||||||||||||||||||| || ||||||| ||||| |||||||||||||||   |||||||||||||||||| |||||||||||     
T  38558324 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatcctttgaaatttgaata 38558423  T
Q  204 attttgaataccactagac 222  Q
    |||||||||||||| ||||    
T  38558424 attttgaataccacaagac 38558442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 74 - 217
Target Start/End: Original strand, 31572174 - 31572327
Alignment:
Q  74 agtaaaatcttaaaagnnnnnnncaatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tccat 163  Q
    ||||||||||||||||       |||| ||||||||| | ||| ||||||||||||||||||||| |||||||||||||| ||||          |||||    
T  31572174 agtaaaatcttaaaagaaaaaaacaattctaagaaatctcatgatttcatgaaagactttttcatcctaaaatttcactataaaatcccacaaaatccat 31572273  T
Q  164 caaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccac 217  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  31572274 caaaatctgatttattaaacaatccttcgaaatttaaatgattttgaataccac 31572327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 104 - 252
Target Start/End: Complemental strand, 29219469 - 29219321
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| | || ||||||||||| |||||||| || ||||||| ||||| |||||||||||||||   |||||||||||||||||||  ||||||||||    
T  29219469 aagaaatctcatcttttcatgaaatactttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatccttcttaatttgaatg 29219370  T
Q  204 attttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||| ||||       ||||||| || ||||||||||||    
T  29219369 attttgaataccacaagactttttttaagtgatgaaaagtcttgattga 29219321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 29556305 - 29556139
Alignment:
Q  97 caatcctaagaaatattatgt-tttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------atcaaaatatgatttattaaacaa 185  Q
    |||||||||||||| | |||| |||||| ||||||||||||| |||||||||||| ||||||||||          |||||||| | |||||||||||||    
T  29556305 caatcctaagaaatctcatgtgtttcataaaagactttttcaagctaaaatttcattagaaaatcccataaaatccatcaaaatctaatttattaaacaa 29556206  T
Q  186 tccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    || ||||||||||||||||||||||||| |||||||        |||||||||||||||||||||||    
T  29556205 tctttcgaaatttgaatgattttgaataacactagattttttttaagtgattaagagtcttgattga 29556139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 252
Target Start/End: Complemental strand, 730281 - 730183
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||        |||||||||||||||||||||||    
T  730281 aaaatccatcaaaatctgatttattaaacaattcgtcgaaatttgaatgattttgaataccactagacttttttttaagtgattaagagtcttgattga 730183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 97 - 222
Target Start/End: Original strand, 9577432 - 9577567
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactag----------aaaatccatcaaaatatgatttattaaacaat 186  Q
    |||||| ||||||| | |||||||||||||||| |||||||| |||||||||||||||          |||||||||||||||   ||||||||||||||    
T  9577432 caatcccaagaaatctcatgttttcatgaaagattttttcattctaaaatttcactagaaaatctcacaaaatccatcaaaatccaatttattaaacaat 9577531  T
Q  187 ccttcgaaatttgaatgattttgaataccactagac 222  Q
    ||||| ||||||||||||||||||||| ||| ||||    
T  9577532 ccttctaaatttgaatgattttgaatatcacaagac 9577567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 217
Target Start/End: Original strand, 48668805 - 48668905
Alignment:
Q  117 ttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaatacca 216  Q
    |||||||||||||||||||| || ||||||| ||||| | |||||  ||||||   ||||||||||||||| |||||||||||||| |||||||||||||    
T  48668805 ttttcatgaaagactttttcttgttaaaattacactacagaatcccacaaaatccaatttattaaacaatctttcgaaatttgaataattttgaatacca 48668904  T
Q  217 c 217  Q
    |    
T  48668905 c 48668905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 6312706 - 6312639
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6312706 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 6312639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 29396456 - 29396523
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29396456 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 29396523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 51701712 - 51701645
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  51701712 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 51701645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 117 - 222
Target Start/End: Complemental strand, 18798651 - 18798556
Alignment:
Q  117 ttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaatacca 216  Q
    |||||||||||||||||||| || ||||||| ||||| ||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  18798651 ttttcatgaaagactttttcttgttaaaattacactacaaaatcca----------atttattaaacaatccttcgaaatttgaatgattttgaatacca 18798562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 97 - 222
Target Start/End: Original strand, 37014640 - 37014775
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactag----------aaaatccatcaaaatatgatttattaaacaat 186  Q
    ||||| |||||||| | ||||||| |||| ||||||||||||||||||||||||||||          |||||||||||||||   |||||| |||||||    
T  37014640 caatcttaagaaatctcatgtttttatgagagactttttcatgctaaaatttcactagaaaatccgacaaaatccatcaaaattcaatttataaaacaat 37014739  T
Q  187 ccttcgaaatttgaatgattttgaataccactagac 222  Q
    | || |||||||||||||||||||||| ||| ||||    
T  37014740 ctttagaaatttgaatgattttgaatatcacaagac 37014775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 252
Target Start/End: Complemental strand, 46328174 - 46328077
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||||   ||| ||||||||||||||||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||    
T  46328174 aaaatccatcaaaatccaattaattaaacaatccttcgaaatttgaatgattttgaataccacgagactttttgtaagtgatgaaaagtcttgattga 46328077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 25612289 - 25612222
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   |||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  25612289 aaaatccatcaaaatccaatttattaaacaatcctttgaaatttgaatgattttgaataccacaagac 25612222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 48177530 - 48177597
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||   ||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  48177530 aaaatccatcaaaatccaatttattaaacaatcattcgaaatttgaatgattttgaataccacaagac 48177597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 252
Target Start/End: Original strand, 5495126 - 5495261
Alignment:
Q  117 ttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaatacca 216  Q
    ||||||| || ||||||||| || ||||||| ||||| |||||||  ||||||   |||||||||| ||||||| ||||||| |||||||||||||||||    
T  5495126 ttttcataaaggactttttcttgttaaaattacactacaaaatcccacaaaatccaatttattaaataatcctttgaaatttaaatgattttgaatacca 5495225  T
Q  217 ctagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    | ||||       ||||||| || ||||||||||||    
T  5495226 cgagactttttttaagtgatgaaaagtcttgattga 5495261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 9322568 - 9322630
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccac 217  Q
    |||||||||||||||   ||||||||||||||||||| |||||||||||||||||||||||||    
T  9322568 aaaatccatcaaaattcaatttattaaacaatccttctaaatttgaatgattttgaataccac 9322630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 28387461 - 28387523
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccac 217  Q
    |||||||||||||||   |||||||||||||||||||||||||||||||| ||||||||||||    
T  28387461 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgaatttgaataccac 28387523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 126 - 250
Target Start/End: Complemental strand, 48524490 - 48524356
Alignment:
Q  126 aagactttttcatgctaaaatttcactagaaa----------atccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaatacc 215  Q
    |||||||||||||| |||||||||||||||||          |||||||||||  ||||||||||||||||| ||| ||||||||||||||||||||| |    
T  48524490 aagactttttcatgttaaaatttcactagaaaatcccacaaaatccatcaaaaactgatttattaaacaatctttcaaaatttgaatgattttgaatatc 48524391  T
Q  216 actagacnnnnnnnaagtgattaagagtcttgatt 250  Q
    || ||||       |||||||||||||| ||||||    
T  48524390 acaagactttttttaagtgattaagagttttgatt 48524356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 47784542 - 47784451
Alignment:
Q  131 tttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||||||| |||||||||||   ||||||   ||||||||||||||| || ||| ||||||| |||||||||||||| ||||    
T  47784542 tttttcatgctaaaatttaactagaaaatctcacaaaatccaatttattaaacaatctttagaagtttgaataattttgaataccacaagac 47784451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 15835121 - 15835183
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccac 217  Q
    |||||||||||||||   |||||||||||||||||| | ||||||||||||||||||||||||    
T  15835121 aaaatccatcaaaatccaatttattaaacaatcctttgcaatttgaatgattttgaataccac 15835183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 173 - 252
Target Start/End: Complemental strand, 49231000 - 49230921
Alignment:
Q  173 atttattaaacaatccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||    
T  49231000 atttattaaataatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattga 49230921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 214
Target Start/End: Original strand, 31622544 - 31622586
Alignment:
Q  172 gatttattaaacaatccttcgaaatttgaatgattttgaatac 214  Q
    |||||||||||||||| || |||||||||||||||||||||||    
T  31622544 gatttattaaacaatcttttgaaatttgaatgattttgaatac 31622586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 45272747 - 45272656
Alignment:
Q  125 aaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccac 217  Q
    ||||| |||||| || ||||||| ||||| ||||||   ||||||   |||||||||||| ||||||||||||| ||| ||||||||||||||    
T  45272747 aaagattttttcttgttaaaattacactacaaaatctcacaaaatccaatttattaaaca-tccttcgaaatttaaataattttgaataccac 45272656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 51085927 - 51085860
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    ||||| |||||||||   ||||||| || |||||||| |||||||||| |||||||||||||| ||||    
T  51085927 aaaattcatcaaaatccaatttatttaataatccttcaaaatttgaattattttgaataccacgagac 51085860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 160
Target Start/End: Complemental strand, 730314 - 730286
Alignment:
Q  132 ttttcatgctaaaatttcactagaaaatc 160  Q
    |||||||||||||||||||||||||||||    
T  730314 ttttcatgctaaaatttcactagaaaatc 730286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 100 - 252
Target Start/End: Complemental strand, 100415 - 100253
Alignment:
Q  100 tcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tccatcaaaatatgatttattaaacaatcct 189  Q
    ||||||||||| | ||||||||||||||||||||||| || ||||||||||||||||||          ||||||||||| |||||||||||||||||||    
T  100415 tcctaagaaatctcatgttttcatgaaagactttttcttgttaaaatttcactagaaaaacccacaaaatccatcaaaatttgatttattaaacaatcct 100316  T
Q  190 tcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    | |||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  100315 ttgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 100253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 102302 - 102137
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc----------atcaaaatatgatttattaaacaat 186  Q
    ||||| |||||||| | || |||| ||||||||||||||||||||||||||||||||||||||||          |||||||| ||||||||||||||||    
T  102302 caatcataagaaatctcatatttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 102203  T
Q  187 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    | ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  102202 ctttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 102137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 97 - 252
Target Start/End: Original strand, 38895 - 39060
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tccatcaaaatatgatttattaaacaat 186  Q
    |||||||||| ||| | ||||||||||||||||||||||||||| |||||||||||||||||          ||||||||||| ||||||||||||||||    
T  38895 caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 38994  T
Q  187 ccttcgaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    ||||| ||||||||||||||||||||| ||||||||       ||||||||||||||||| |||||    
T  38995 ccttccaaatttgaatgattttgaatatcactagacttcttttaagtgattaagagtctttattga 39060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 98 - 219
Target Start/End: Original strand, 540 - 671
Alignment:
Q  98 aatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tccatcaaaatatgatttattaaacaatc 187  Q
    ||||||||||||| | |||||||| | |||||||||||||| | |||||||||||||||||          |||||||||||||||||||||||||||||    
T  540 aatcctaagaaatctcatgttttcgtcaaagactttttcataccaaaatttcactagaaaattccacaaaatccatcaaaatatgatttattaaacaatc 639  T
Q  188 cttcgaaatttgaatgattttgaataccacta 219  Q
    |||| |||||||||||||||||||||||||||    
T  640 cttccaaatttgaatgattttgaataccacta 671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 252
Target Start/End: Complemental strand, 14072 - 13924
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| | || |||||||||||||||||||| |  ||||||  ||||| |||||||||||||||   ||||||||||||||| || ||||||||||||    
T  14072 aagaaatctcatcttttcatgaaagactttttcttattaaaatcccactacaaaatccatcaaaatccaatttattaaacaatcttttgaaatttgaatg 13973  T
Q  204 attttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||| ||||       ||||||| || ||||||||||||    
T  13972 attttgaataccacaagactttttttaagtgatgaaaagtcttgattga 13924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 252
Target Start/End: Original strand, 21255 - 21403
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatg 203  Q
    ||||||| | || |||||||||||||||||||| |  ||||||  ||||| |||||||||||||||   ||||||||||||||| || ||||||||||||    
T  21255 aagaaatctcatcttttcatgaaagactttttcttattaaaatcccactacaaaatccatcaaaatccaatttattaaacaatcttttgaaatttgaatg 21354  T
Q  204 attttgaataccactagacnnnnnnnaagtgattaagagtcttgattga 252  Q
    |||||||||||||| ||||       ||||||| || ||||||||||||    
T  21355 attttgaataccacaagactttttttaagtgatgaaaagtcttgattga 21403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 217
Target Start/End: Complemental strand, 10699 - 10637
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccac 217  Q
    |||||||||||||||   |||||||||||||||||| ||||||||||||||||||||||||||    
T  10699 aaaatccatcaaaattcaatttattaaacaatcctttgaaatttgaatgattttgaataccac 10637  T

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Target: scaffold0042 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 58144 - 58206
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccac 217  Q
    |||||||||||||||   ||||||||||||||| |||||||||||||||||||||||||||||    
T  58144 aaaatccatcaaaatccaatttattaaacaatcattcgaaatttgaatgattttgaataccac 58206  T

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Target: scaffold0922 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 157 - 222
Target Start/End: Complemental strand, 4337 - 4272
Alignment:
Q  157 aatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    |||||||||||||   ||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  4337 aatccatcaaaatccaatttattaaacaatccttcaaaatttgaatgattttgaataccacaagac 4272  T

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Target: scaffold0110 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 217
Target Start/End: Original strand, 39624 - 39747
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tccatcaaaatatgatttattaaacaatccttcga 193  Q
    ||||||| |||| |||||||||||||||||||| || ||||||| ||||| ||||          |||||||||||   |||||||||| ||||||||||    
T  39624 aagaaatcttatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaataatccttcga 39723  T
Q  194 aatttgaatgattttgaataccac 217  Q
    | ||||||||||||||||||||||    
T  39724 agtttgaatgattttgaataccac 39747  T

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Target: scaffold1504 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 1002 - 936
Alignment:
Q  155 aaaatccatcaaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 222  Q
    ||||||||||||||| | |||||||||| ||| |||||||||||||||||||||||||||||| ||||    
T  1002 aaaatccatcaaaatct-atttattaaataattcttcgaaatttgaatgattttgaataccacaagac 936  T

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Target: scaffold0054 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 215
Target Start/End: Original strand, 36914 - 37035
Alignment:
Q  104 aagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaa----------tccatcaaaatatgatttattaaacaatccttcga 193  Q
    ||||||| |||| |||||||||||||||||||| || ||||||| ||||| ||||          |||||||||||   |||||||||||||| ||||||    
T  36914 aagaaatcttatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatgcttcga 37013  T
Q  194 aatttgaatgattttgaatacc 215  Q
    ||||| ||||||||||||||||    
T  37014 aattttaatgattttgaatacc 37035  T

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Target: scaffold0347 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 186
Target Start/End: Complemental strand, 14967 - 14878
Alignment:
Q  97 caatcctaagaaatattatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccatcaaaatatgatttattaaacaat 186  Q
    ||||| |||||||| | || |||||||||||||||||||| || ||||||| ||||| |||||||  ||||||   ||||||||||||||    
T  14967 caatcttaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccaatttattaaacaat 14878  T

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