View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10660_low_35 (Length: 237)
Name: NF10660_low_35
Description: NF10660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10660_low_35 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 15 - 237
Target Start/End: Complemental strand, 38091428 - 38091206
Alignment:
| Q |
15 |
gttataactgaaatatgtggttttgtgaacttgttccataatcatacaagttagggagtcttatacacaattaatcgacgtttgattcgttaattttatg |
114 |
Q |
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| T |
38091428 |
gttataactgaaatatgtggttttgtgaacttgttccataatcgtacaagttagggagtcttatacacaattaattgacgtttgattcgttaattttatg |
38091329 |
T |
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| Q |
115 |
attgtataagaatagtaatgagaaagaataaactcatgatagatcaaagtgaaattttcctaatactagtggattgatcatttttaggtctttgatatct |
214 |
Q |
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| T |
38091328 |
attgtataagaatagtaacgagaaagaataaactcatgatagatcaaagtgaaattttcctaatactattgaattgatcatttttaggtctttgatatct |
38091229 |
T |
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| Q |
215 |
ttctttattacaatttgtatctc |
237 |
Q |
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| T |
38091228 |
ttctttattacaatttgtatctc |
38091206 |
T |
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