View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10660_low_41 (Length: 222)
Name: NF10660_low_41
Description: NF10660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10660_low_41 |
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Alignment Details
Target: chr3 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 24 - 211
Target Start/End: Complemental strand, 6060473 - 6060286
Alignment:
| Q |
24 |
cgtgtgtatggcagggacaaagacaaggagggcatcatcaagtttttgttagatgataacagtgatgatggtgaagaagtgattgtgatacctattgtgg |
123 |
Q |
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| T |
6060473 |
cgtgtgtatggcagggacaaagacaaggagggcatcatcaagtttttgttagatgataacagtgataatggtgaagaagtgattgtgatacctattgtgg |
6060374 |
T |
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| Q |
124 |
gaatgggaggggtaggaaaaactactttagctcagttggtgtacaatgacgagtatttgaagcatgtatttgattttaaagcttgggt |
211 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
6060373 |
gaatgggaggggtaggaaaaactactttagctcagttggtgtacaatgatgagtatttgaagcatgtatttgattttaaagcttgggt |
6060286 |
T |
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