View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10661_low_16 (Length: 321)
Name: NF10661_low_16
Description: NF10661
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10661_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 17 - 310
Target Start/End: Complemental strand, 248817 - 248524
Alignment:
| Q |
17 |
ataacctatgtgtatacagcttgggagctcttagttacaagccacctcaaaatatgatcaatactaccttatgctcaaattaattcatttggattttaat |
116 |
Q |
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| T |
248817 |
ataacctatgtgtatacagcttgggagctcttagttacaagccacctcaaaatatgatcaatactaccttatgctcaaattaattcatttggattttaat |
248718 |
T |
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| Q |
117 |
ttcttccgaggtattgtccactttagatattatagaaacttcacttcacaaatgcggcttagttaaaagtcgttgttcaattgagtgcgtgtttataaat |
216 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
248717 |
ttcttctgaggtattgtccactttagatattatagaaacttcacttcacaaatgcggcttagttaaaagtcgttgttcaattgagtgcgtgtttataaat |
248618 |
T |
|
| Q |
217 |
tactcgtaagttcgtaacctcggttttcaagtaatgtgagannnnnnnggtataccaaaacaaaattagacaaaattcatcctagtacattctt |
310 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
248617 |
tactcgtaagttcgtaacctcggttttcaagtaatgtgagatttttttggtataccaaaacaaaattagacaaaattcatcctagtacattctt |
248524 |
T |
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