View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10661_low_18 (Length: 311)
Name: NF10661_low_18
Description: NF10661
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10661_low_18 |
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Alignment Details
Target: chr4 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 17 - 301
Target Start/End: Complemental strand, 24212865 - 24212581
Alignment:
| Q |
17 |
aaaagatggctgatgaacgaagtccctagacatcaaactacagtatgcattatccagctaatgtaaaacagataccttgttttctgcaacctgtgtgttg |
116 |
Q |
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| T |
24212865 |
aaaagatggctgatgaacgaagtccctagacatcaaactacagtatgcattatccagctaatgtaaaacagataccttgttttctgcaacctgtgtgttg |
24212766 |
T |
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| Q |
117 |
gagaagacatcagccaccaacgatgctatcctggactttgttacctatataacaaccatcattttctcaaaaagtattagccacaaataagaaagtaaag |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24212765 |
gagaagacatcagccaccaacgatgctatcctggactttgttacctatataacaaccatcattttctcaaaaagtattagccacaaataagaaagtaaag |
24212666 |
T |
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| Q |
217 |
gaaggtttaaaagaaggacaatttcattaagatactatcgcatacattacattactttatagtcgttcgaaccggtgttttcttc |
301 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24212665 |
gaaggtttaaaagaaggacaatttcattaagatactatcgcatacattacattactttatagtcgttcgaaccggtgttttcttc |
24212581 |
T |
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