View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10661_low_19 (Length: 305)

Name: NF10661_low_19
Description: NF10661
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10661_low_19
NF10661_low_19
[»] chr8 (28 HSPs)
chr8 (2-304)||(22907305-22907607)
chr8 (107-222)||(24548956-24549071)
chr8 (100-304)||(43373559-43373761)
chr8 (103-304)||(17345540-17345741)
chr8 (100-224)||(16405144-16405268)
chr8 (2-74)||(43685584-43685656)
chr8 (107-304)||(6774337-6774535)
chr8 (107-304)||(16193807-16194005)
chr8 (2-74)||(5238125-5238197)
chr8 (2-74)||(24661401-24661473)
chr8 (100-304)||(222770-222975)
chr8 (100-304)||(736393-736598)
chr8 (100-304)||(860288-860493)
chr8 (229-304)||(5238184-5238259)
chr8 (229-304)||(24661339-24661414)
chr8 (229-304)||(43685643-43685718)
chr8 (100-303)||(21852045-21852249)
chr8 (100-304)||(21844651-21844856)
chr8 (13-304)||(24928882-24929165)
chr8 (100-304)||(30120690-30120895)
chr8 (90-244)||(23837154-23837308)
chr8 (104-174)||(16674603-16674672)
chr8 (13-70)||(22321597-22321654)
chr8 (89-211)||(41246613-41246735)
chr8 (13-93)||(23217924-23218004)
chr8 (92-162)||(13662492-13662561)
chr8 (16-74)||(22981241-22981299)
chr8 (13-74)||(41507116-41507177)
[»] chr3 (31 HSPs)
chr3 (2-300)||(16744210-16744508)
chr3 (106-304)||(17912573-17912771)
chr3 (89-304)||(15859115-15859331)
chr3 (13-209)||(15468520-15468717)
chr3 (13-209)||(22275088-22275285)
chr3 (100-222)||(12030321-12030443)
chr3 (100-304)||(14842652-14842856)
chr3 (100-304)||(15936718-15936922)
chr3 (100-304)||(2049777-2049982)
chr3 (107-222)||(15614808-15614923)
chr3 (100-304)||(15938560-15938764)
chr3 (89-304)||(51158109-51158325)
chr3 (13-304)||(13838783-13839066)
chr3 (107-242)||(47984624-47984759)
chr3 (107-242)||(48003198-48003333)
chr3 (229-304)||(2449329-2449404)
chr3 (107-242)||(47993911-47994046)
chr3 (107-242)||(48012484-48012619)
chr3 (2-74)||(2449391-2449463)
chr3 (100-174)||(41270043-41270116)
chr3 (100-174)||(55316187-55316260)
chr3 (100-174)||(45860773-45860846)
chr3 (100-174)||(13955112-13955185)
chr3 (100-174)||(13975944-13976017)
chr3 (100-149)||(19231945-19231994)
chr3 (13-93)||(18969968-18970048)
chr3 (92-304)||(16821099-16821312)
chr3 (89-121)||(22144532-22144564)
chr3 (129-250)||(12264932-12265053)
chr3 (13-74)||(48421624-48421685)
chr3 (129-244)||(11329098-11329214)
[»] chr7 (25 HSPs)
chr7 (2-304)||(7292886-7293188)
chr7 (88-304)||(13037105-13037322)
chr7 (107-304)||(47481122-47481320)
chr7 (100-304)||(11580830-11581035)
chr7 (100-304)||(36052634-36052836)
chr7 (100-304)||(16211733-16211938)
chr7 (100-304)||(18253926-18254130)
chr7 (103-304)||(16479041-16479244)
chr7 (107-236)||(13320988-13321117)
chr7 (2-74)||(11516265-11516337)
chr7 (2-74)||(15441717-15441789)
chr7 (2-74)||(30262282-30262354)
chr7 (229-304)||(11516324-11516399)
chr7 (229-304)||(15441655-15441730)
chr7 (229-304)||(30262220-30262295)
chr7 (100-231)||(3059933-3060064)
chr7 (100-222)||(10989378-10989499)
chr7 (100-304)||(13572644-13572849)
chr7 (100-222)||(2437425-2437546)
chr7 (118-242)||(13911168-13911292)
chr7 (103-235)||(296128-296257)
chr7 (100-174)||(25292560-25292633)
chr7 (13-93)||(13351999-13352079)
chr7 (89-121)||(15822691-15822723)
chr7 (89-244)||(17224075-17224230)
[»] chr4 (21 HSPs)
chr4 (2-304)||(26680070-26680372)
chr4 (104-304)||(15675180-15675381)
chr4 (89-304)||(13246386-13246602)
chr4 (107-294)||(31115603-31115791)
chr4 (89-224)||(54118416-54118551)
chr4 (100-231)||(111362-111493)
chr4 (104-187)||(10104440-10104523)
chr4 (100-304)||(10644187-10644392)
chr4 (229-304)||(10488659-10488734)
chr4 (229-304)||(16328017-16328092)
chr4 (2-74)||(10488600-10488672)
chr4 (19-74)||(16328079-16328134)
chr4 (100-304)||(47357622-47357827)
chr4 (100-304)||(13048312-13048517)
chr4 (197-304)||(10104341-10104449)
chr4 (103-178)||(7849970-7850044)
chr4 (100-244)||(15044794-15044938)
chr4 (13-74)||(19559410-19559471)
chr4 (155-244)||(41166083-41166172)
chr4 (89-121)||(44055870-44055902)
chr4 (157-244)||(7185981-7186068)
[»] scaffold0078 (1 HSPs)
scaffold0078 (2-304)||(37157-37459)
[»] scaffold0195 (2 HSPs)
scaffold0195 (100-304)||(19173-19378)
scaffold0195 (100-304)||(21257-21462)
[»] scaffold0077 (1 HSPs)
scaffold0077 (100-304)||(37004-37209)
[»] chr2 (22 HSPs)
chr2 (89-304)||(19794795-19795011)
chr2 (100-304)||(36982532-36982737)
chr2 (104-303)||(24341481-24341681)
chr2 (100-304)||(8891209-8891414)
chr2 (107-304)||(25265481-25265679)
chr2 (103-304)||(7507935-7508138)
chr2 (100-304)||(462706-462910)
chr2 (229-304)||(19689492-19689567)
chr2 (229-304)||(23820168-23820243)
chr2 (100-222)||(19886824-19886945)
chr2 (100-230)||(43643123-43643250)
chr2 (229-304)||(14906531-14906606)
chr2 (229-304)||(20015108-20015183)
chr2 (2-74)||(14906593-14906665)
chr2 (2-74)||(20015049-20015121)
chr2 (2-74)||(23820109-23820181)
chr2 (28-74)||(19689554-19689600)
chr2 (100-297)||(20627411-20627609)
chr2 (100-167)||(17396882-17396948)
chr2 (155-211)||(19669279-19669335)
chr2 (13-74)||(25601911-25601972)
chr2 (89-121)||(32465813-32465845)
[»] chr5 (29 HSPs)
chr5 (104-304)||(22053924-22054125)
chr5 (89-304)||(27182638-27182854)
chr5 (100-304)||(23506932-23507137)
chr5 (108-304)||(18531158-18531355)
chr5 (13-209)||(17471768-17471956)
chr5 (103-234)||(34939248-34939379)
chr5 (2-74)||(20623007-20623079)
chr5 (2-74)||(21233681-21233753)
chr5 (100-304)||(18778071-18778276)
chr5 (229-304)||(20623066-20623141)
chr5 (229-304)||(21233619-21233694)
chr5 (100-304)||(22366560-22366765)
chr5 (100-304)||(25426596-25426801)
chr5 (100-222)||(12342-12463)
chr5 (100-222)||(21073758-21073879)
chr5 (107-181)||(29190478-29190552)
chr5 (232-304)||(37052844-37052916)
chr5 (229-304)||(16536294-16536369)
chr5 (2-74)||(25900558-25900630)
chr5 (2-74)||(37052782-37052854)
chr5 (100-304)||(19499867-19500072)
chr5 (100-242)||(43443538-43443679)
chr5 (119-304)||(4200064-4200251)
chr5 (2-74)||(16536235-16536307)
chr5 (100-304)||(27009809-27010014)
chr5 (229-303)||(25900498-25900571)
chr5 (111-244)||(19862186-19862319)
chr5 (100-244)||(23493885-23494029)
chr5 (13-74)||(2031697-2031758)
[»] scaffold0622 (1 HSPs)
scaffold0622 (89-231)||(9338-9480)
[»] chr6 (19 HSPs)
chr6 (89-304)||(23153403-23153619)
chr6 (107-304)||(14626209-14626407)
chr6 (100-304)||(35009530-35009735)
chr6 (103-304)||(1657839-1658040)
chr6 (100-304)||(25175531-25175736)
chr6 (107-304)||(1650184-1650382)
chr6 (103-304)||(15862443-15862643)
chr6 (103-236)||(27740808-27740941)
chr6 (100-304)||(27654062-27654267)
chr6 (100-177)||(16825962-16826038)
chr6 (89-243)||(18381821-18381975)
chr6 (13-74)||(15889853-15889914)
chr6 (114-220)||(22361926-22362032)
chr6 (16-74)||(25640702-25640760)
chr6 (89-118)||(32898745-32898774)
chr6 (13-93)||(15005034-15005114)
chr6 (13-93)||(22585674-22585754)
chr6 (13-93)||(22590505-22590585)
chr6 (129-244)||(25367374-25367490)
[»] chr1 (16 HSPs)
chr1 (100-242)||(20445646-20445788)
chr1 (100-242)||(20531411-20531553)
chr1 (100-304)||(20931312-20931517)
chr1 (100-304)||(22227777-22227981)
chr1 (100-304)||(22232474-22232678)
chr1 (89-304)||(20893717-20893933)
chr1 (100-222)||(20913004-20913126)
chr1 (107-222)||(2116228-2116343)
chr1 (100-231)||(37844616-37844746)
chr1 (103-304)||(41394191-41394394)
chr1 (229-304)||(51452589-51452664)
chr1 (107-187)||(45051416-45051496)
chr1 (2-74)||(51452530-51452602)
chr1 (100-174)||(5072599-5072672)
chr1 (100-174)||(18601329-18601402)
chr1 (90-121)||(49967607-49967638)
[»] scaffold0025 (2 HSPs)
scaffold0025 (104-304)||(8820-9021)
scaffold0025 (100-304)||(148688-148893)
[»] scaffold0023 (2 HSPs)
scaffold0023 (100-231)||(48565-48696)
scaffold0023 (104-177)||(36065-36137)
[»] scaffold0266 (2 HSPs)
scaffold0266 (100-304)||(1091-1296)
scaffold0266 (100-304)||(3673-3877)
[»] scaffold0302 (1 HSPs)
scaffold0302 (100-304)||(12083-12285)
[»] scaffold0049 (1 HSPs)
scaffold0049 (100-304)||(48155-48359)
[»] scaffold0008 (3 HSPs)
scaffold0008 (100-232)||(128332-128464)
scaffold0008 (119-242)||(31819-31942)
scaffold0008 (93-121)||(22650-22678)
[»] scaffold0498 (1 HSPs)
scaffold0498 (100-304)||(8846-9050)
[»] scaffold0218 (1 HSPs)
scaffold0218 (100-304)||(5152-5356)
[»] scaffold0175 (1 HSPs)
scaffold0175 (100-304)||(1047-1250)
[»] scaffold0106 (1 HSPs)
scaffold0106 (89-297)||(41686-41894)
[»] scaffold0011 (3 HSPs)
scaffold0011 (100-304)||(123255-123460)
scaffold0011 (89-121)||(255074-255106)
scaffold0011 (89-121)||(261680-261712)
[»] scaffold0125 (1 HSPs)
scaffold0125 (107-211)||(41622-41726)
[»] scaffold0012 (1 HSPs)
scaffold0012 (100-231)||(247607-247738)
[»] scaffold1542 (1 HSPs)
scaffold1542 (102-224)||(706-828)
[»] scaffold0215 (2 HSPs)
scaffold0215 (107-304)||(9428-9626)
scaffold0215 (107-304)||(16326-16524)
[»] scaffold0026 (2 HSPs)
scaffold0026 (100-304)||(107715-107919)
scaffold0026 (100-304)||(64607-64812)
[»] scaffold0529 (1 HSPs)
scaffold0529 (107-304)||(2936-3135)
[»] scaffold0413 (1 HSPs)
scaffold0413 (100-304)||(6155-6358)
[»] scaffold0132 (1 HSPs)
scaffold0132 (107-304)||(13480-13678)
[»] scaffold0104 (1 HSPs)
scaffold0104 (100-222)||(48482-48603)
[»] scaffold0162 (2 HSPs)
scaffold0162 (100-304)||(26506-26710)
scaffold0162 (107-211)||(8362-8466)
[»] scaffold0075 (1 HSPs)
scaffold0075 (103-242)||(34614-34755)
[»] scaffold0022 (1 HSPs)
scaffold0022 (100-304)||(5295-5498)
[»] scaffold0141 (4 HSPs)
scaffold0141 (229-304)||(22637-22712)
scaffold0141 (229-304)||(26892-26967)
scaffold0141 (2-74)||(22578-22650)
scaffold0141 (2-74)||(26833-26905)
[»] scaffold0124 (2 HSPs)
scaffold0124 (229-304)||(1673-1748)
scaffold0124 (2-74)||(1735-1807)
[»] scaffold0076 (1 HSPs)
scaffold0076 (100-304)||(42965-43170)
[»] scaffold0009 (1 HSPs)
scaffold0009 (90-304)||(271983-272197)
[»] scaffold0001 (5 HSPs)
scaffold0001 (90-304)||(171863-172077)
scaffold0001 (90-304)||(177566-177780)
scaffold0001 (89-121)||(70882-70914)
scaffold0001 (13-74)||(171794-171855)
scaffold0001 (13-74)||(177497-177558)
[»] scaffold1560 (1 HSPs)
scaffold1560 (100-222)||(26-147)
[»] scaffold0369 (1 HSPs)
scaffold0369 (100-222)||(3690-3811)
[»] scaffold0139 (2 HSPs)
scaffold0139 (100-304)||(14140-14344)
scaffold0139 (100-304)||(21195-21399)
[»] scaffold0116 (1 HSPs)
scaffold0116 (100-304)||(3-208)
[»] scaffold1404 (1 HSPs)
scaffold1404 (100-149)||(1815-1863)
[»] scaffold0361 (1 HSPs)
scaffold0361 (108-177)||(3183-3252)
[»] scaffold0053 (1 HSPs)
scaffold0053 (89-244)||(76984-77139)
[»] scaffold0021 (1 HSPs)
scaffold0021 (89-211)||(132420-132542)
[»] scaffold0483 (1 HSPs)
scaffold0483 (13-74)||(1028-1089)
[»] scaffold0109 (1 HSPs)
scaffold0109 (13-74)||(45815-45876)
[»] scaffold0066 (2 HSPs)
scaffold0066 (129-250)||(54412-54533)
scaffold0066 (129-173)||(45007-45051)
[»] scaffold0028 (1 HSPs)
scaffold0028 (129-211)||(79533-79616)
[»] scaffold1734 (1 HSPs)
scaffold1734 (13-74)||(1286-1347)
[»] scaffold0396 (1 HSPs)
scaffold0396 (13-74)||(12007-12068)
[»] scaffold0240 (1 HSPs)
scaffold0240 (89-118)||(7522-7551)
[»] scaffold0160 (1 HSPs)
scaffold0160 (13-74)||(3406-3467)
[»] scaffold0122 (1 HSPs)
scaffold0122 (13-74)||(24496-24557)
[»] scaffold0044 (1 HSPs)
scaffold0044 (89-118)||(38253-38282)
[»] scaffold0970 (1 HSPs)
scaffold0970 (155-211)||(2476-2532)
[»] scaffold0507 (1 HSPs)
scaffold0507 (17-93)||(1629-1705)


Alignment Details
Target: chr8 (Bit Score: 271; Significance: 1e-151; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 2 - 304
Target Start/End: Complemental strand, 22907607 - 22907305
Alignment:
Q  2 aatgagatggacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaattcacaaatt 101  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22907607 aatgagatcaacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcatcaattcacaaatt 22907508  T
Q  102 tcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaaca 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22907507 tcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaaca 22907408  T
Q  202 acatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaac 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||    
T  22907407 acatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaac 22907308  T
Q  302 atg 304  Q
    |||    
T  22907307 atg 22907305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 24548956 - 24549071
Alignment:
Q  107 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 206  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | ||||||    
T  24548956 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc 24549055  T
Q  207 aattgcacaagaatca 222  Q
    |||||  |||||||||    
T  24549056 aattgagcaagaatca 24549071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 100 - 304
Target Start/End: Complemental strand, 43373761 - 43373559
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||||   |||||||||||||||||||| |||||| ||| ||||||||||||| |||||||||| | |||||| |||| || | |    
T  43373761 tttcaccaaaacaccaacaa---ttcaaattctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaacca 43373665  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
     | ||||||||| |||||||||| | ||||| | ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| |||||||||     
T  43373664 tagcatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 43373565  T
Q  299 aacatg 304  Q
    ||||||    
T  43373564 aacatg 43373559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 103 - 304
Target Start/End: Original strand, 17345540 - 17345741
Alignment:
Q  103 caccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaa 202  Q
    |||||||||||||||||||||||||||| |||||| | || |||||| ||| ||||||||||| |||||||||||| | |||||| |||| || ||| ||    
T  17345540 caccaaaacaccaacaacaattcaaattttcatcacctattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataa 17345639  T
Q  203 catcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaac 301  Q
     ||||| || |||||||||||| |||||||| || | ||| | |  |||| |||| |||  ||||||||||||||||||| ||||| |||||| || |||    
T  17345640 tatcaactgaacaagaatcataactcaattc-acaataacttagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaac 17345738  T
Q  302 atg 304  Q
    |||    
T  17345739 atg 17345741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 100 - 224
Target Start/End: Complemental strand, 16405268 - 16405144
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||| ||||||||||||||||  ||||||| ||||||||||| ||||||  || ||||||||||| |||||||||||||| |||||| |||| || |||    
T  16405268 tttcatcaaaacaccaacaacatctcaaattatcatcatcaattcatgaatttgcatacccaagcagtgattcatcaactaaaacatcaattaacaacaa 16405169  T
Q  200 caacatcaattgcacaagaatcata 224  Q
     ||||||||||| ||||||||||||    
T  16405168 taacatcaattgaacaagaatcata 16405144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 43685584 - 43685656
Alignment:
Q  2 aatgagatggacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43685584 aatgagatcaacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 43685656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 107 - 304
Target Start/End: Complemental strand, 6774535 - 6774337
Alignment:
Q  107 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 206  Q
    |||||||||||||||| |||||||||||| |||||| |||||| ||| ||||||||||| |||||||||||| | |||||| | || || ||| ||||||    
T  6774535 aaaacaccaacaacaaatcaaattctcataatcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatc 6774436  T
Q  207 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    |||||  ||||||||| | ||||| | ||| | ||| | |  ||||||| | |||  |||||||||||| ||||| |||||| ||||||||| ||||||    
T  6774435 aattgagcaagaatcaaatctcaaattaacaataacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatg 6774337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 107 - 304
Target Start/End: Complemental strand, 16194005 - 16193807
Alignment:
Q  107 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 206  Q
    |||||||||||||||  |||||||  |||| ||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | | ||||||    
T  16194005 aaaacaccaacaacatctcaaattaacatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatc 16193906  T
Q  207 aattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    ||||| |||||||||| | ||||| | ||| ||||  || | ||||||| | |||  |||||||||||| ||||| |||||| ||||||||| ||||||    
T  16193905 aattgaacaagaatcaaatctcaaattaacaacaatttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatg 16193807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 5238125 - 5238197
Alignment:
Q  2 aatgagatggacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    ||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5238125 aatgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 5238197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 24661473 - 24661401
Alignment:
Q  2 aatgagatggacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    ||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24661473 aatgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 24661401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 100 - 304
Target Start/End: Complemental strand, 222975 - 222770
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  |    
T  222975 tttcaccaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 222877  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 297  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| |    
T  222876 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat 222777  T
Q  298 aaacatg 304  Q
     ||||||    
T  222776 gaacatg 222770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 100 - 304
Target Start/End: Complemental strand, 736598 - 736393
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  |    
T  736598 tttcaccaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 736500  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 297  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| |    
T  736499 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat 736400  T
Q  298 aaacatg 304  Q
     ||||||    
T  736399 gaacatg 736393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 100 - 304
Target Start/End: Complemental strand, 860493 - 860288
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  |    
T  860493 tttcaccaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 860395  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 297  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| |    
T  860394 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat 860295  T
Q  298 aaacatg 304  Q
     ||||||    
T  860294 gaacatg 860288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 229 - 304
Target Start/End: Original strand, 5238184 - 5238259
Alignment:
Q  229 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||    
T  5238184 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatg 5238259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 229 - 304
Target Start/End: Complemental strand, 24661414 - 24661339
Alignment:
Q  229 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||    
T  24661414 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatg 24661339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 229 - 304
Target Start/End: Original strand, 43685643 - 43685718
Alignment:
Q  229 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||    
T  43685643 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatg 43685718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 100 - 303
Target Start/End: Complemental strand, 21852249 - 21852045
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| |||||||||||||||||| ||||| ||||| ||| | ||||||||||| |||||||||  |||| ||| | || |||  |    
T  21852249 tttcaccaaaacaccaaca-caattcaaattctcatcaacaatcaatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca 21852151  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 297  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| | |||  ||||||| |||||||||| |||||| |||||||||    
T  21852150 taacatcatttgaacaagaatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatattt 21852051  T
Q  298 aaacat 303  Q
    ||||||    
T  21852050 aaacat 21852045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 100 - 304
Target Start/End: Complemental strand, 21844856 - 21844651
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| |||||||||||||||||| ||||| ||||| ||| | ||||||||||| |||||||||  |||| ||| | || |||  |    
T  21844856 tttcaccaaaacaccaaca-caattcaaattctcatcaacaatcaatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca 21844758  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 297  Q
     ||||||| ||| |||| ||||| | ||||| | ||| |||||  | |  ||||||| | |||  ||||||| |||||||||| |||||| |||||||||    
T  21844757 taacatcatttgaacaaaaatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatattt 21844658  T
Q  298 aaacatg 304  Q
    |||||||    
T  21844657 aaacatg 21844651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 304
Target Start/End: Complemental strand, 24929165 - 24928882
Alignment:
Q  13 catcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaattcacaaatttcaccaaaaca 112  Q
    |||||||||| |||||||| || ||| ||| ||||| || ||||||||| |||||||||||| | || ||        |||||| |||||||| ||| ||    
T  24929165 catcaacaattaaccacaaccagaacttatgatcatgcattccatcatatttcaacaacaacatgtcgta--------attcaccaatttcacaaaacca 24929074  T
Q  113 ccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgc 212  Q
    ||||||||||| ||  |||||| || |||  |||||| ||| |||||||||||||||||||||||  | |||||| |||| || | | ||| |||||||     
T  24929073 ccaacaacaatccat-ttctcaacaacaaatcatgaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacaaccataacctcaattga 24928975  T
Q  213 acaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    ||||||  |||| |||||| |||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| | | ||||| ||||||    
T  24928974 acaagagacataactcaatccaaccacaacttagcgaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatg 24928882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 304
Target Start/End: Original strand, 30120690 - 30120895
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| ||||||||||| |||||||||||| ||||| ||| | ||||||||||| |||||||||  |||| ||| | || |||  |    
T  30120690 tttcaccaaaacaccaaca-caattcaaattatcatcatcaatcgatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca 30120788  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 297  Q
     ||||||||||| ||| |||||| | ||||| | ||| |||||  | |  ||||||| | |||  ||||||| |||||||||| |||||| | ||||| |    
T  30120789 taacatcaattgaacatgaatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatat 30120888  T
Q  298 aaacatg 304  Q
     ||||||    
T  30120889 gaacatg 30120895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 244
Target Start/End: Original strand, 23837154 - 23837308
Alignment:
Q  90 aattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaac-atgtatacccaagcaatgattcatcaactataacatct 188  Q
    ||||||| |||||||| ||| ||||| |||||| |||  ||||||||| |||  ||||||  ||| |||||||||| |||| |||||||| | ||||||     
T  23837154 aattcaccaatttcacaaaaccaccaccaacaactcat-ttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatca 23837252  T
Q  189 attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 244  Q
     |||||| ||||||||||||||| ||| || || || | ||||||||| |||||||    
T  23837253 cttagcaacaacaacatcaattgaacatgactcttaccacaattcaacaacaacat 23837308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 174
Target Start/End: Complemental strand, 16674672 - 16674603
Alignment:
Q  104 accaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcat 174  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||| ||| | || |||||||| ||||||    
T  16674672 accaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatgcaaactcaagcaattattcat 16674603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 22321654 - 22321597
Alignment:
Q  13 catcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaa 70  Q
    |||||||||||||||||||||| ||||||||||||| || ||||||| |||| |||||    
T  22321654 catcaacaatcaaccacaatcacaacatataatcatgcattccatcacaatttaacaa 22321597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 211
Target Start/End: Original strand, 41246613 - 41246735
Alignment:
Q  89 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaa-catgtatacccaagcaatgattcatcaactataacatc 187  Q
    ||||||||||||||||||||||||||||||||| ||| | |||||| || ||| ||||||| |||| | |||||||| |||| | |||| | | |||||     
T  41246613 caattcacaaatttcaccaaaacaccaacaacatttc-atttctcaacaacaaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatg 41246711  T
Q  188 tattagcatcaacaacatcaattg 211  Q
      ||| || |||||||||||||||    
T  41246712 acttaacaacaacaacatcaattg 41246735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 23217924 - 23218004
Alignment:
Q  13 catcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaatt 93  Q
    |||||||||||||||||||  | ||| ||||||||| || ||||||| | |||||||||||| | ||||| ||| ||||||    
T  23217924 catcaacaatcaaccacaactacaacttataatcatgcattccatcacatttcaacaacaacatgtcataattcatcaatt 23218004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 162
Target Start/End: Complemental strand, 13662561 - 13662492
Alignment:
Q  92 ttcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaa 162  Q
    ||||| |||||||| ||| |||||||||||||| |  |||||||||||||||||| |  ||||||||||||    
T  13662561 ttcaccaatttcacaaaaccaccaacaacaatttag-ttctcatcatcaatccataattatgtatacccaa 13662492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 22981241 - 22981299
Alignment:
Q  16 caacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    ||||||||||||||||  | ||| ||||||||| || ||||||| ||||||||||||||    
T  22981241 caacaatcaaccacaacaacaacttataatcatgcattccatcaaaattcaacaacaac 22981299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 41507177 - 41507116
Alignment:
Q  13 catcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    |||||||||| |||||||| || ||| ||| ||||| || ||||||||| ||||||||||||    
T  41507177 catcaacaattaaccacaaccacaacttatgatcatgcattccatcatatttcaacaacaac 41507116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 267; Significance: 1e-149; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 2 - 300
Target Start/End: Complemental strand, 16744508 - 16744210
Alignment:
Q  2 aatgagatggacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaattcacaaatt 101  Q
    ||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16744508 aatgagatcaacatcaactatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaattcacaaatt 16744409  T
Q  102 tcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaaca 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  16744408 tcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactacaacatttattagcatcaaca 16744309  T
Q  202 acatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaa 300  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  16744308 acatcaattgcacaagaatcatagctcaattcaactataacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaa 16744210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 106 - 304
Target Start/End: Complemental strand, 17912771 - 17912573
Alignment:
Q  106 caaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacat 205  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||| ||| ||||||||||| |||||||||||| | |||||| |||| || ||| |||||    
T  17912771 caaaacacccacaacaattcaaattttcatcatcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataacat 17912672  T
Q  206 caattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    | |||| ||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||    
T  17912671 cgattgaacatgaatcatagctcaattcaactacaacatatcaaattcatcaattttgcacaattttcataacttttcatttttacatatttaaacatg 17912573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 89 - 304
Target Start/End: Complemental strand, 15859331 - 15859115
Alignment:
Q  89 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatct 188  Q
    |||||||| | ||||||||||||| ||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| | ||||||     
T  15859331 caattcaccattttcaccaaaacaacaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatca 15859232  T
Q  189 attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcattt 287  Q
    |||| || | | ||||||||||| |||||||||||| ||||||||||| ||||| | |  ||||||| | |||  |||||||||||| ||||| ||||||    
T  15859231 attaacagccataacatcaattgaacaagaatcataactcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcattt 15859132  T
Q  288 ctacatatttaaacatg 304  Q
     | ||||||| ||||||    
T  15859131 gttcatatttgaacatg 15859115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 209
Target Start/End: Complemental strand, 15468717 - 15468520
Alignment:
Q  13 catcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaatt-cacaaatttcaccaaaac 111  Q
    |||||||||| |||||||| || ||| ||| |||||||| ||||||||  |||||||||||| | ||||| |||  ||||| ||||||||||||||||||    
T  15468717 catcaacaattaaccacaaccacaacttatgatcatacattccatcatgtttcaacaacaacatgtcataattcaccaatttcacaaatttcaccaaaac 15468618  T
Q  112 accaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaat 209  Q
    | ||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||  || ||||||||  ||| ||  ||||||||||||    
T  15468617 aacaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcattcacaataacatcagttaacaataacaacatcaat 15468520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 13 - 209
Target Start/End: Original strand, 22275088 - 22275285
Alignment:
Q  13 catcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttc-ctcaattcacaaatttcaccaaaac 111  Q
    |||||||||| |||||||| || ||| ||| ||||| || ||||||||  |||||||||||| | ||||| ||| || | ||||||||||||||||||||    
T  22275088 catcaacaattaaccacaaccacaacttatgatcatgcattccatcatgtttcaacaacaacatgtcataattcactaatttcacaaatttcaccaaaac 22275187  T
Q  112 accaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaat 209  Q
    ||||||||||||||||||||||||||||||| |||||| ||| ||||| ||||||||||||||  || ||||||||  ||| ||  ||||||||||||    
T  22275188 accaacaacaattcaaattctcatcatcaattcatgaatatgcatacctaagcaatgattcattcacaataacatcagttaacaataacaacatcaat 22275285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 100 - 222
Target Start/End: Complemental strand, 12030443 - 12030321
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| |||||||| |||| || | |    
T  12030443 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccataacatcaattaacaacca 12030344  T
Q  200 caacatcaattgcacaagaatca 222  Q
     | ||||||||| ||||||||||    
T  12030343 tagcatcaattgaacaagaatca 12030321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 100 - 304
Target Start/End: Complemental strand, 14842856 - 14842652
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| | |||||| |||| |||||||||  |||||||| |||| |||| |    
T  14842856 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaatcaattattcatcaatcataacatcaattaacatcca 14842758  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | |  ||||||| | |||  |||||||||||||||||| |||||| |||| ||||     
T  14842757 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcataacttatcatttttacacatttg 14842658  T
Q  299 aacatg 304  Q
    ||||||    
T  14842657 aacatg 14842652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 100 - 304
Target Start/End: Complemental strand, 15936922 - 15936718
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||| || ||||| |||||||||  | |||||| |||| |||| |    
T  15936922 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatcca 15936824  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | || ||||||| | |||  |||||||||||| ||||| |||||| |||| ||||     
T  15936823 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttatcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttg 15936724  T
Q  299 aacatg 304  Q
    ||||||    
T  15936723 aacatg 15936718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 100 - 304
Target Start/End: Original strand, 2049777 - 2049982
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | |    
T  2049777 tttcaccaaaacaccaacaacaattcaaattttcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaacca 2049876  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
     | ||||||||| |||| ||||| | ||||| | ||| ||||| | |  ||||||| | |||  |||||||||||| || || |||| | |||||||||     
T  2049877 tagcatcaattgaacaaaaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaagttatcatgtttacatatttg 2049976  T
Q  299 aacatg 304  Q
    ||||||    
T  2049977 aacatg 2049982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 15614808 - 15614923
Alignment:
Q  107 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 206  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | ||||||    
T  15614808 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc 15614907  T
Q  207 aattgcacaagaatca 222  Q
    |||||  |||||||||    
T  15614908 aattgagcaagaatca 15614923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 100 - 304
Target Start/End: Complemental strand, 15938764 - 15938560
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| ||||||||||| ||| |||||||||||||| ||| |||| || ||||| |||||||||  | |||||| |||| |||| |    
T  15938764 tttcaccaaaacaccaaca-caattcaaattttcagcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatcca 15938666  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | || ||||||| | |||  |||||||||||| ||||| |||||| |||| ||||     
T  15938665 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttatcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttg 15938566  T
Q  299 aacatg 304  Q
    ||||||    
T  15938565 aacatg 15938560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 89 - 304
Target Start/End: Complemental strand, 51158325 - 51158109
Alignment:
Q  89 caattcacaaatttcaccaaaacacc-aacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatc 187  Q
    |||||||||||||| | ||||||||  |||||||  |||||||  |||| ||||| |||||| ||| |||||||||||||||||||||||| | ||||||    
T  51158325 caattcacaaattt-agcaaaacacttaacaacatctcaaattaacatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatc 51158227  T
Q  188 tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatt 286  Q
     |||| || | | ||||||||||| |||||||||||| ||||||  ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||    
T  51158226 aattaacagccataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatt 51158127  T
Q  287 tctacatatttaaacatg 304  Q
    | ||||||||| ||||||    
T  51158126 tttacatatttgaacatg 51158109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 304
Target Start/End: Original strand, 13838783 - 13839066
Alignment:
Q  13 catcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaattcacaaatttcaccaaaaca 112  Q
    |||||||||| |||||||| || ||| ||| ||||| || ||||||||| |||||||||||| | || ||        |||||| |||||||| ||| ||    
T  13838783 catcaacaattaaccacaaccacaacttatgatcattcattccatcatatttcaacaacaacatgtcgta--------attcaccaatttcacaaaacca 13838874  T
Q  113 ccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgc 212  Q
    ||||||||||| ||  |||||| || |||  |||||| ||| |||||||| ||||||||||||||| | |||||| |||| || | | |||||||||||     
T  13838875 ccaacaacaatccat-ttctcaacaacaaatcatgaatatgcatacccaaacaatgattcatcaaccacaacatcaattaacagccataacatcaattga 13838973  T
Q  213 acaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    |||||||||||| |||||| |||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| | | ||||| ||||||    
T  13838974 acaagaatcataactcaatccaaccacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatg 13839066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 107 - 242
Target Start/End: Original strand, 47984624 - 47984759
Alignment:
Q  107 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 206  Q
    |||||| || |||||||||||||||||||||||||| |||||| ||| |||||||||  ||||||||||||| | |||||| |||| || ||| ||||||    
T  47984624 aaaacatcagcaacaattcaaattctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatc 47984723  T
Q  207 aattgcacaagaatcatagctcaattcaactacaac 242  Q
    ||||| ||| |||||| | |||||| |||| |||||    
T  47984724 aattgaacatgaatcacatctcaatccaacaacaac 47984759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 107 - 242
Target Start/End: Original strand, 48003198 - 48003333
Alignment:
Q  107 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 206  Q
    |||||| || |||||||||||||||||||||||||| |||||| ||| |||||||||  ||||||||||||| | |||||| |||| || ||| ||||||    
T  48003198 aaaacatcagcaacaattcaaattctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatc 48003297  T
Q  207 aattgcacaagaatcatagctcaattcaactacaac 242  Q
    ||||| ||| |||||| | |||||| |||| |||||    
T  48003298 aattgaacatgaatcacatctcaatccaacaacaac 48003333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 229 - 304
Target Start/End: Complemental strand, 2449404 - 2449329
Alignment:
Q  229 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| |||||||    
T  2449404 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatg 2449329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 107 - 242
Target Start/End: Original strand, 47993911 - 47994046
Alignment:
Q  107 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 206  Q
    |||||| || |||||||||||||||||||||||||| |||||| ||| |||||||||  ||||||||||||| | || ||| |||| || ||| ||||||    
T  47993911 aaaacatcagcaacaattcaaattctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatc 47994010  T
Q  207 aattgcacaagaatcatagctcaattcaactacaac 242  Q
    ||||| ||| |||||| | |||||| |||| |||||    
T  47994011 aattgaacatgaatcacatctcaatccaacaacaac 47994046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 107 - 242
Target Start/End: Original strand, 48012484 - 48012619
Alignment:
Q  107 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 206  Q
    |||||| || |||||||||||||||||||||||||| |||||| ||| |||||||||  ||||||||||||| | || ||| |||| || ||| ||||||    
T  48012484 aaaacatcagcaacaattcaaattctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatc 48012583  T
Q  207 aattgcacaagaatcatagctcaattcaactacaac 242  Q
    ||||| ||| |||||| | |||||| |||| |||||    
T  48012584 aattgaacatgaatcacatctcaatccaacaacaac 48012619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 2449463 - 2449391
Alignment:
Q  2 aatgagatggacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    ||||||||  |||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  2449463 aatgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaac 2449391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 100 - 174
Target Start/End: Original strand, 41270043 - 41270116
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcat 174  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||| | ||||||||||| ||||||    
T  41270043 tttcaccaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatgcaaacccaagcaattattcat 41270116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 100 - 174
Target Start/End: Original strand, 55316187 - 55316260
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcat 174  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||| | ||||||||||| ||||||    
T  55316187 tttcaccaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatgcaaacccaagcaattattcat 55316260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 100 - 174
Target Start/End: Original strand, 45860773 - 45860846
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcat 174  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||||||||| ||| | ||||||||||| ||||||    
T  45860773 tttcaccaaaacaccaaca-caactcaaattctcatcaacaatccatgaatatgcaaacccaagcaattattcat 45860846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 174
Target Start/End: Complemental strand, 13955185 - 13955112
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcat 174  Q
    ||||||||||||||||||| ||| ||||||| |||||| ||||||||||| ||| | ||||||||||| ||||||    
T  13955185 tttcaccaaaacaccaaca-caactcaaattatcatcaacaatccatgaatatgcaaacccaagcaattattcat 13955112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 174
Target Start/End: Complemental strand, 13976017 - 13975944
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcat 174  Q
    ||||||||||||||||||| ||| ||||||| |||||| ||||||||||| ||| | ||||||||||| ||||||    
T  13976017 tttcaccaaaacaccaaca-caactcaaattatcatcaacaatccatgaatatgcaaacccaagcaattattcat 13975944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 19231945 - 19231994
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaa 149  Q
    |||||||||||||||||||||||| |||||| ||||||||||| ||||||    
T  19231945 tttcaccaaaacaccaacaacaatccaaattatcatcatcaattcatgaa 19231994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 18969968 - 18970048
Alignment:
Q  13 catcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaatt 93  Q
    ||||||||||||||||||| || ||| ||||||||| |  ||||||| |||||||||||||| | ||||| ||| ||||||    
T  18969968 catcaacaatcaaccacaaccacaacttataatcatgctttccatcagaattcaacaacaacatgtcataattcatcaatt 18970048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 304
Target Start/End: Original strand, 16821099 - 16821312
Alignment:
Q  92 ttcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctatt 191  Q
    ||||| |||||||| ||| |||||||||| ||| |  || ||||||| |||||||||| ||| | ||||||||||| |||||||||  |||| ||| | |    
T  16821099 ttcaccaatttcacaaaaccaccaacaaccatttat-ttatcatcattaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaat 16821197  T
Q  192 agcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttct 289  Q
    | |||  | ||||||||||| ||| |||||| | ||||| ||||| |||||  | |  ||||||| | |||| |||||||  ||||| |||  ||||| |    
T  16821198 aacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcatagcttaacattttt 16821297  T
Q  290 acatatttaaacatg 304  Q
    |||||||| ||||||    
T  16821298 acatatttgaacatg 16821312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 121
Target Start/End: Complemental strand, 22144564 - 22144532
Alignment:
Q  89 caattcacaaatttcaccaaaacaccaacaaca 121  Q
    |||||||||||||||||||||||||||||||||    
T  22144564 caattcacaaatttcaccaaaacaccaacaaca 22144532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 250
Target Start/End: Complemental strand, 12265053 - 12264932
Alignment:
Q  129 ttctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctc 228  Q
    |||||||||||||||||| |  |||||||||||||  || ||||| | || | ||||||  |||  | ||||||||||||| | ||| |||||| | |||    
T  12265053 ttctcatcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctc 12264954  T
Q  229 aattcaactacaacatgtcaaa 250  Q
    | |||||| ||||||| |||||    
T  12264953 atttcaacaacaacatatcaaa 12264932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 48421624 - 48421685
Alignment:
Q  13 catcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    |||||||||| |||||||| || ||  ||||||||| || ||||||||| ||||||||||||    
T  48421624 catcaacaattaaccacaaccacaatttataatcatgcattccatcatatttcaacaacaac 48421685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 244
Target Start/End: Complemental strand, 11329214 - 11329098
Alignment:
Q  129 ttctcatcatcaatccatgaa-catgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 227  Q
    ||||||||| |||  |||||| |||| |||||||||| |||| | |||| | | ||||||  |||||| |||||||||||||||  || ||||| || |     
T  11329214 ttctcatcaacaaatcatgaatcatgcatacccaagccatgaattatcatcaacaacatcacttagcaacaacaacatcaattgatcatgaatcttatca 11329115  T
Q  228 caattcaactacaacat 244  Q
    ||||||||| |||||||    
T  11329114 caattcaacaacaacat 11329098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 263; Significance: 1e-146; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 2 - 304
Target Start/End: Original strand, 7292886 - 7293188
Alignment:
Q  2 aatgagatggacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaattcacaaatt 101  Q
    ||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7292886 aatgagatcaacatcaacaatcaaccacaatcacaacatataatcatacactccatcataattcaacaacaacttatcatatttcatcaattcacaaatt 7292985  T
Q  102 tcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaaca 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7292986 tcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaaca 7293085  T
Q  202 acatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaac 301  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||    
T  7293086 acatcaattgcacaagaatcatagctcaattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaac 7293185  T
Q  302 atg 304  Q
    |||    
T  7293186 atg 7293188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 88 - 304
Target Start/End: Complemental strand, 13037322 - 13037105
Alignment:
Q  88 tcaattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatc 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| |||||||||||||||||||||||| | ||||||    
T  13037322 tcaattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatc 13037223  T
Q  188 tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatt 286  Q
     ||||  ||  | ||||| ||||| |||||||||||| ||||||  ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||    
T  13037222 aattaatattcataacattaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatt 13037123  T
Q  287 tctacatatttaaacatg 304  Q
    | | | ||||| ||||||    
T  13037122 tgttcctatttgaacatg 13037105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 107 - 304
Target Start/End: Complemental strand, 47481320 - 47481122
Alignment:
Q  107 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 206  Q
    |||||||||||||||||||||||| ||||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| ||||  | | | ||||||    
T  47481320 aaaacaccaacaacaattcaaattatcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaaaaacatcaattaagagcgataacatc 47481221  T
Q  207 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    ||||| |||||||||||| ||||||||||| ||||| | |  ||||||| | |||   ||||||||||| ||||| |||||| ||||||||| ||||||    
T  47481220 aattgaacaagaatcataactcaattcaacaacaacttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatg 47481122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 100 - 304
Target Start/End: Complemental strand, 11581035 - 11580830
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    |||||||||||||||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||||||| | |||||| |||| || | |    
T  11581035 tttcaccaaaacaccaacaacaattcaaattctcgtcctcaattcatgaatatgtatacccaagcaatgattcatcaaccacaacatcaattaacagcca 11580936  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
     ||||||||||| |||||||||||| ||||||  ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| | | |||||     
T  11580935 taacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttg 11580836  T
Q  299 aacatg 304  Q
    ||||||    
T  11580835 aacatg 11580830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 100 - 304
Target Start/End: Original strand, 36052634 - 36052836
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||||| | |||||| |||| || | |    
T  36052634 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaacca 36052733  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
    |||||||||||| |||||||||| | ||||| | |   ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| |||||||||     
T  36052734 caacatcaattgaacaagaatcaaatctcaaatta---acaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 36052830  T
Q  299 aacatg 304  Q
    ||||||    
T  36052831 aacatg 36052836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 100 - 304
Target Start/End: Original strand, 16211733 - 16211938
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    |||||||||||||||||||||||||||||||||| |||| ||| |||||| ||| ||||||||||||||| |||||||| | |||||| |||| || | |    
T  16211733 tttcaccaaaacaccaacaacaattcaaattctcttcattaattcatgaatatgcatacccaagcaatgaatcatcaaccacaacatcaattaacaacca 16211832  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
     ||||||||||  |||||||||| | ||||| | ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| |||||||||     
T  16211833 taacatcaatttaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 16211932  T
Q  299 aacatg 304  Q
    ||||||    
T  16211933 aacatg 16211938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 100 - 304
Target Start/End: Complemental strand, 18254130 - 18253926
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||| || ||||| |||||||||  | |||||| |||| |||| |    
T  18254130 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatcca 18254032  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| |||| ||||     
T  18254031 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttg 18253932  T
Q  299 aacatg 304  Q
    ||||||    
T  18253931 aacatg 18253926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 103 - 304
Target Start/End: Complemental strand, 16479244 - 16479041
Alignment:
Q  103 caccaaaacaccaacaacaattcaaa-ttctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaaca 201  Q
    |||||||||||||||||||||||||| || |||||||||||||||||| ||| ||||||||||| |||||||||||| | |||||| | || || ||| |    
T  16479244 caccaaaacaccaacaacaattcaaaattttcatcatcaatccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaata 16479145  T
Q  202 acatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccattttgcacaattttcataacttctcatttctacatatttaaa 300  Q
    ||||||||||  ||||||||| | ||||| | ||  | ||| |  | ||||||| | |||  |||||||||||| ||||| |||||| ||||||||| ||    
T  16479144 acatcaattgagcaagaatcaaatctcaaattaaaaataacttaacaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaa 16479045  T
Q  301 catg 304  Q
    ||||    
T  16479044 catg 16479041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 107 - 236
Target Start/End: Original strand, 13320988 - 13321117
Alignment:
Q  107 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 206  Q
    ||||||||||||||||| |||||||||||||||||| ||||||  || | |||||||  ||||||||||||| | |||||| |||| || ||| ||||||    
T  13320988 aaaacaccaacaacaatccaaattctcatcatcaattcatgaatgtgcaaacccaagtcatgattcatcaacaacaacatcaattaacaacaataacatc 13321087  T
Q  207 aattgcacaagaatcatagctcaattcaac 236  Q
    ||||| ||| |||||||| |||||||||||    
T  13321088 aattgaacatgaatcatatctcaattcaac 13321117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 11516265 - 11516337
Alignment:
Q  2 aatgagatggacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    ||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11516265 aatgagatcaacatcaacaatcaaccacaatcataacatatactcatacactccatcataattcaacaacaac 11516337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 15441789 - 15441717
Alignment:
Q  2 aatgagatggacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    ||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15441789 aatgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 15441717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 30262354 - 30262282
Alignment:
Q  2 aatgagatggacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    ||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30262354 aatgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 30262282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 229 - 304
Target Start/End: Original strand, 11516324 - 11516399
Alignment:
Q  229 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||    
T  11516324 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatg 11516399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 229 - 304
Target Start/End: Complemental strand, 15441730 - 15441655
Alignment:
Q  229 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||    
T  15441730 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatg 15441655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 229 - 304
Target Start/End: Complemental strand, 30262295 - 30262220
Alignment:
Q  229 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||    
T  30262295 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatg 30262220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 100 - 231
Target Start/End: Original strand, 3059933 - 3060064
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||| ||||||||| ||||||  ||||||| ||||| ||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| ||   |    
T  3059933 tttcatcaaaacacccacaacatctcaaattatcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtca 3060032  T
Q  200 caacatcaattgcacaagaatcatagctcaat 231  Q
     ||||||||||| |||||||||||| ||||||    
T  3060033 taacatcaattgaacaagaatcataactcaat 3060064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 100 - 222
Target Start/End: Original strand, 10989378 - 10989499
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| | ||||||||||| |||||||||  |||| ||| | || |||  |    
T  10989378 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca 10989476  T
Q  200 caacatcaattgcacaagaatca 222  Q
     ||||||| ||| ||||||||||    
T  10989477 taacatcatttgaacaagaatca 10989499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 100 - 304
Target Start/End: Original strand, 13572644 - 13572849
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||||||||| ||| | ||||||||||| |||||| ||  |||| ||| | || |||  |    
T  13572644 tttcaccaaaacaccaaca-caactcaaattctcatcaacaatccatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattca 13572742  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 297  Q
     ||||||| ||| ||||| |||| | ||||| | ||| |||||  | |  ||||||| | |||  ||||||| |||||||||| |||||| |||||||||    
T  13572743 taacatcatttgaacaagcatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatattt 13572842  T
Q  298 aaacatg 304  Q
    |||||||    
T  13572843 aaacatg 13572849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 100 - 222
Target Start/End: Original strand, 2437425 - 2437546
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| | || |||||||| |||||||||  |||| ||| | || |||  |    
T  2437425 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaactcaagcaattattcatcaatcataatatcaaataacattca 2437523  T
Q  200 caacatcaattgcacaagaatca 222  Q
     ||||||| ||| ||||||||||    
T  2437524 taacatcatttgaacaagaatca 2437546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 242
Target Start/End: Complemental strand, 13911292 - 13911168
Alignment:
Q  118 aacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaag 217  Q
    |||||||||||||||||||||||||||||||| ||| | ||||||| ||| |||||||||  |||| ||| | || |||  | ||||||||||| ||| |    
T  13911292 aacaattcaaattctcatcatcaatccatgaatatgcaaacccaagaaattattcatcaatcataatatcaaataacattcataacatcaattgaacatg 13911193  T
Q  218 aatcatagctcaattcaactacaac 242  Q
    ||||| | ||||| ||||| |||||    
T  13911192 aatcacatctcaaatcaacaacaac 13911168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 235
Target Start/End: Complemental strand, 296257 - 296128
Alignment:
Q  103 caccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaa 202  Q
    ||||||||||||||||  ||||||| || ||| |||||||||||||| | | |||||||| || | ||||||||||   |||||| ||||  | ||||||    
T  296257 caccaaaacaccaacacaaattcaatttttcaacatcaatccatgaataagcatacccaatcagtaattcatcaac---aacatcaattaatagcaacaa 296161  T
Q  203 catcaattgcacaagaatcatagctcaattcaa 235  Q
    ||||||||| ||| |||||| | | ||||||||    
T  296160 catcaattgaacatgaatcacaacacaattcaa 296128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 174
Target Start/End: Complemental strand, 25292633 - 25292560
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcat 174  Q
    ||||||||||||||||||| ||| |||||||||||| | ||||||||||| ||| | ||||||||||| ||||||    
T  25292633 tttcaccaaaacaccaaca-caactcaaattctcattaacaatccatgaatatgcaaacccaagcaattattcat 25292560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 13351999 - 13352079
Alignment:
Q  13 catcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaatt 93  Q
    ||||||||||| ||||||| || ||| ||||||||| || ||||||  |||||||||||||| | ||||| ||| ||||||    
T  13351999 catcaacaatctaccacaaccacaacttataatcatgcattccatcccaattcaacaacaacatgtcataattcatcaatt 13352079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 121
Target Start/End: Complemental strand, 15822723 - 15822691
Alignment:
Q  89 caattcacaaatttcaccaaaacaccaacaaca 121  Q
    |||||||||||||||||||||||||||||||||    
T  15822723 caattcacaaatttcaccaaaacaccaacaaca 15822691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 244
Target Start/End: Complemental strand, 17224230 - 17224075
Alignment:
Q  89 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaac-atgtatacccaagcaatgattcatcaactataacatc 187  Q
    |||||||| ||||| || ||| |||||||||||| |||  ||||||||| |||  ||||||  ||| |||||||||| |||| ||||||   | ||||||    
T  17224230 caattcaccaattttacaaaaccaccaacaacaactcat-ttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcattaacaacatc 17224132  T
Q  188 tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 244  Q
      |||||| ||||||||||||||| ||| || || ||   ||||||||| |||||||    
T  17224131 acttagcaacaacaacatcaattgaacatgactcttacaacaattcaacaacaacat 17224075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 263; Significance: 1e-146; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 2 - 304
Target Start/End: Original strand, 26680070 - 26680372
Alignment:
Q  2 aatgagatggacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaattcacaaatt 101  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||    
T  26680070 aatgagatcaacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcatcgattcccaaatt 26680169  T
Q  102 tcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaaca 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26680170 tcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaaca 26680269  T
Q  202 acatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaac 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||    
T  26680270 acatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatctattttgcacaattttcataacttttcatttttacatatttaaac 26680369  T
Q  302 atg 304  Q
    |||    
T  26680370 atg 26680372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 104 - 304
Target Start/End: Complemental strand, 15675381 - 15675180
Alignment:
Q  104 accaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaac 203  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||| | |||||| |||| || ||| |||    
T  15675381 accaaaacaccaacaacaattcaaattttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataac 15675282  T
Q  204 atcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaaca 302  Q
    |||||||| ||| |||||||| ||||||||||| ||||| | |  ||||||| | |||  |||||||||||| |||||| ||||| |||||| || ||||    
T  15675281 atcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaaca 15675182  T
Q  303 tg 304  Q
    ||    
T  15675181 tg 15675180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 89 - 304
Target Start/End: Original strand, 13246386 - 13246602
Alignment:
Q  89 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatct 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| |||||||||||||||||||||||| | ||||||     
T  13246386 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatca 13246485  T
Q  189 attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcattt 287  Q
    |||| || | | ||||||||||| |||||||||||| ||||||  ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| ||||||    
T  13246486 attaacagccataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcattt 13246585  T
Q  288 ctacatatttaaacatg 304  Q
     | | ||||| ||||||    
T  13246586 gttcctatttgaacatg 13246602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 107 - 294
Target Start/End: Original strand, 31115603 - 31115791
Alignment:
Q  107 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 206  Q
    |||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||| | |||||| |||| || ||| ||||||    
T  31115603 aaaacaccaacaacaattcaaattttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatc 31115702  T
Q  207 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacata 294  Q
    ||||| ||| |||||||| ||||||||||| ||||| | |  ||||||| | |||  ||| |||||||| |||||| ||||| ||||||    
T  31115703 aattgaacatgaatcatatctcaattcaacaacaacttaggaaaattcaccaattgagcataattttcacaacttcacatttttacata 31115791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 89 - 224
Target Start/End: Complemental strand, 54118551 - 54118416
Alignment:
Q  89 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatct 188  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| | ||||||     
T  54118551 caattcaccattttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatca 54118452  T
Q  189 attagcatcaacaacatcaattgcacaagaatcata 224  Q
    |||| || | | ||||||||||| ||||||||||||    
T  54118451 attaacaactataacatcaattgaacaagaatcata 54118416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 100 - 231
Target Start/End: Original strand, 111362 - 111493
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||| ||||||||||||||||  ||||||| ||||| ||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | |    
T  111362 tttcatcaaaacaccaacaacatctcaaattatcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaacca 111461  T
Q  200 caacatcaattgcacaagaatcatagctcaat 231  Q
     ||||||||||| |||||||||||| ||||||    
T  111462 taacatcaattgaacaagaatcataactcaat 111493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 10104523 - 10104440
Alignment:
Q  104 accaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatc 187  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||| | ||||||    
T  10104523 accaaaacaccaacaacaattcaaattttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatc 10104440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 100 - 304
Target Start/End: Original strand, 10644187 - 10644392
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| | ||||||||||| |||||||||  |||| ||| | || |||  |    
T  10644187 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca 10644285  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 297  Q
     ||||||||||| ||| |||||| | ||||| ||||| |||||  | |  ||||||| | |||| |||||||  |||||||||  ||||| |||||||||    
T  10644286 taacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatattt 10644385  T
Q  298 aaacatg 304  Q
     ||||||    
T  10644386 gaacatg 10644392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 229 - 304
Target Start/End: Original strand, 10488659 - 10488734
Alignment:
Q  229 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| |||||||    
T  10488659 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatg 10488734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 229 - 304
Target Start/End: Complemental strand, 16328092 - 16328017
Alignment:
Q  229 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| |||||||    
T  16328092 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatg 16328017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 10488600 - 10488672
Alignment:
Q  2 aatgagatggacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    ||||||||  |||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  10488600 aatgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaac 10488672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 16328134 - 16328079
Alignment:
Q  19 caatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  16328134 caatcaactacaatcataacatataatcataccctccatcataattcaacaacaac 16328079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 304
Target Start/End: Original strand, 47357622 - 47357827
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| ||  |||||||||||||||||||||||||| ||  |||||||| |||| |||||||||  |||| ||| | || |||  |    
T  47357622 tttcaccaaaacaccaaca-cagctcaaattctcatcatcaatccatgaatatacatacccaatcaattattcatcaatcataatatcaaataacattca 47357720  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 297  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| |    
T  47357721 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat 47357820  T
Q  298 aaacatg 304  Q
     ||||||    
T  47357821 gaacatg 47357827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 304
Target Start/End: Complemental strand, 13048517 - 13048312
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| ||| |||||||||||| | | ||||||||| ||| | ||||||||||| |||||| ||  |||  ||||| || |||  |    
T  13048517 tttcaccaaaacaccaaca-caactcaaattctcattaactatccatgaatatgcaaacccaagcaattattcattaatcatattatctaataacattca 13048419  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 297  Q
     ||||||| ||| ||||| |||| | |||||   ||| |||||  | |  ||||||||| |||  ||||||| |||||||||| || ||| |||||||||    
T  13048418 taacatcatttgaacaagcatcacatctcaaactaacaacaacttaggagaaattcatcaattgagcacaatattcataacttatcctttttacatattt 13048319  T
Q  298 aaacatg 304  Q
    |||||||    
T  13048318 aaacatg 13048312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 197 - 304
Target Start/End: Complemental strand, 10104449 - 10104341
Alignment:
Q  197 caacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatat 295  Q
    ||||||||||||||| ||| |||||||| ||||||||||| ||||| | |  ||||||| | |||  |||||||||||| |||||| ||||| ||||||     
T  10104449 caacaacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataa 10104350  T
Q  296 ttaaacatg 304  Q
    || ||||||    
T  10104349 ttgaacatg 10104341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 7849970 - 7850044
Alignment:
Q  103 caccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaac 178  Q
    |||||||||||||||| ||||||||||| |||||| |||| |||||  |||||||| ||||  |||||||||||||    
T  7849970 caccaaaacaccaaca-caattcaaattttcatcaccaattcatgattatgtatactcaagtcatgattcatcaac 7850044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 15044794 - 15044938
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaac-atgtatacccaagcaatgattcatcaactataacatctattagcatca 198  Q
    |||||||||| || ||||||||||| |  |||||||||||||  |||||   ||| | |||||||| |||| |||||| | | ||||||  |||||| ||    
T  15044794 tttcaccaaagcaacaacaacaatttat-ttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcatcaacaacatcacttagcaaca 15044892  T
Q  199 acaacatcaattgcacaagaatcatagctcaattcaactacaacat 244  Q
    ||||||||||||| ||| ||||| || | ||||||||| |||||||    
T  15044893 acaacatcaattgaacatgaatcttatcacaattcaacaacaacat 15044938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 19559410 - 19559471
Alignment:
Q  13 catcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    ||||||||||| ||||||| || ||| ||||||||| || ||||||| ||||||||||||||    
T  19559410 catcaacaatctaccacaaccacaacttataatcatgcattccatcacaattcaacaacaac 19559471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 244
Target Start/End: Complemental strand, 41166172 - 41166083
Alignment:
Q  155 atacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 244  Q
    |||||||||| ||||||||||||| | ||||||  |||||| ||||||||||||||| ||| || || |  | ||||||||| |||||||    
T  41166172 atacccaagccatgattcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttgccacaattcaacaacaacat 41166083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 121
Target Start/End: Original strand, 44055870 - 44055902
Alignment:
Q  89 caattcacaaatttcaccaaaacaccaacaaca 121  Q
    |||||||||||||||||||||||||||||||||    
T  44055870 caattcacaaatttcaccaaaacaccaacaaca 44055902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 7186068 - 7185981
Alignment:
Q  157 acccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 244  Q
    |||||||| |||| |||||||| |||| |||| |||||| ||||||||||||||  ||| |||||  | | ||||||||| |||||||    
T  7186068 acccaagccatgaatcatcaacaataatatctcttagcaacaacaacatcaattaaacatgaatctcatcacaattcaacaacaacat 7185981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 2 - 304
Target Start/End: Complemental strand, 37459 - 37157
Alignment:
Q  2 aatgagatggacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaattcacaaatt 101  Q
    ||||||||  |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  37459 aatgagatcaacattaacaatcaaccacaatcacaacatataatcatacactccatcataattcaacaaaaacttatcatatttcatcaattcacaaatt 37360  T
Q  102 tcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaaca 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37359 tcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaaca 37260  T
Q  202 acatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaac 301  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| ||||    
T  37259 acatcaattgcacaagaatcatagctcaatccaactacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaac 37160  T
Q  302 atg 304  Q
    |||    
T  37159 atg 37157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 98; Significance: 3e-48; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 100 - 304
Target Start/End: Original strand, 19173 - 19378
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || |||    
T  19173 tttcaccaaaacaccaacaataattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaa 19272  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
     ||||||||||| ||| |||||||| ||||||||||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| |||||||||     
T  19273 taacatcaattgaacaggaatcataactcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 19372  T
Q  299 aacatg 304  Q
    ||||||    
T  19373 aacatg 19378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 100 - 304
Target Start/End: Original strand, 21257 - 21462
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || |||    
T  21257 tttcaccaaaacaccaacaataattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaa 21356  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
     ||||||||||| ||| |||||||| ||||||||||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| |||||||||     
T  21357 taacatcaattgaacaggaatcataactcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 21456  T
Q  299 aacatg 304  Q
    ||||||    
T  21457 aacatg 21462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 94; Significance: 7e-46; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 100 - 304
Target Start/End: Complemental strand, 37209 - 37004
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | |    
T  37209 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagcca 37110  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
     ||| ||||||| |||||| ||||| |||||| |||| ||||| | |  ||||||| | |||| |||||||||||| ||||| |||||| |||||||||     
T  37109 taacgtcaattgaacaagattcataactcaatccaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttttacatatttg 37010  T
Q  299 aacatg 304  Q
    ||||||    
T  37009 aacatg 37004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 7e-46; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 89 - 304
Target Start/End: Complemental strand, 19795011 - 19794795
Alignment:
Q  89 caattcacaaatttcaccaaaa-caccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatc 187  Q
    |||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  19795011 caattcacaa-tttcaccaaaaacaccaacaaaaattcaaattctcatcatcaatccatgaatatgcatacccaagcaatgattcatcaactataacatc 19794913  T
Q  188 tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatt 286  Q
     |||| |   || ||||||||||| |||||||||||| ||||||||||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||    
T  19794912 aattaacggaaataacatcaattgaacaagaatcataactcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatt 19794813  T
Q  287 tctacatatttaaacatg 304  Q
    | | | ||||| ||||||    
T  19794812 tgttcctatttgaacatg 19794795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 100 - 304
Target Start/End: Complemental strand, 36982737 - 36982532
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    |||||| ||||||||||||| |||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||||| | |||||| |||| || |||    
T  36982737 tttcactaaaacaccaacaataattcaaattctcatcatcaattcatgaatatgcatacccaaacaatgattcatcaacaacaacatcaattaacaacaa 36982638  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
     ||||||||||| ||| |||||||| ||||||||||| ||||| || | ||||||| | |||  |||||||||||| ||||| |||||| |||||||||     
T  36982637 taacatcaattgaacaggaatcataactcaattcaacaacaacttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 36982538  T
Q  299 aacatg 304  Q
    ||||||    
T  36982537 aacatg 36982532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 303
Target Start/End: Complemental strand, 24341681 - 24341481
Alignment:
Q  104 accaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaac 203  Q
    |||||||||||||||| |||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||   |||||| |||| || ||| |||    
T  24341681 accaaaacaccaacaataattcaaattttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaggaacatcaattaacaacaataac 24341582  T
Q  204 atcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaaca 302  Q
    |||||||| ||| |||||||| ||||||||||| ||||| | |  ||||||| | |||  |||||||||||| |||||| ||||| |||||| || ||||    
T  24341581 atcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaaca 24341482  T
Q  303 t 303  Q
    |    
T  24341481 t 24341481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 100 - 304
Target Start/End: Original strand, 8891209 - 8891414
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||||| ||||||||||||||| ||||| |||||| ||| |||||||||||||||||||||||| | |||||| ||||  | | |    
T  8891209 tttcaccaaaacaccaacaaccattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatagcca 8891308  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
     ||||||||||| |||||||||||| ||||||  ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| | | |||||     
T  8891309 taacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttg 8891408  T
Q  299 aacatg 304  Q
    ||||||    
T  8891409 aacatg 8891414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 107 - 304
Target Start/End: Complemental strand, 25265679 - 25265481
Alignment:
Q  107 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 206  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||| ||||||||| ||| | |||||| |||| || ||||||||||    
T  25265679 aaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatc 25265580  T
Q  207 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    ||||| ||| |  ||  | |  |||||||| ||||||| |  ||||||| | |||  |||||||||||| |||||| ||||| |||||| || ||||||    
T  25265579 aattgaacatggttctcatcataattcaacaacaacatagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatg 25265481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 103 - 304
Target Start/End: Complemental strand, 7508138 - 7507935
Alignment:
Q  103 caccaaaacaccaacaacaattcaaa-ttctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaaca 201  Q
    |||||||||||||||||||||||||| || |||||||||||||||||| ||| ||||||||||| |||||||||||| | |||||| | || || ||| |    
T  7508138 caccaaaacaccaacaacaattcaaaattttcatcatcaatccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaata 7508039  T
Q  202 acatcaatt-gcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaa 299  Q
    |||||||||   ||| |||||||| ||||||| ||| ||||| | | |||||||| | |||   ||||||||||||||||| | |||| ||||||||| |    
T  7508038 acatcaattaaaacatgaatcatatctcaatt-aacaacaacttagccaaattcaccaattgaacacaattttcataacttattatttttacatatttga 7507940  T
Q  300 acatg 304  Q
    |||||    
T  7507939 acatg 7507935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 100 - 304
Target Start/End: Original strand, 462706 - 462910
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||| |||||||||||||||| |||||||||| ||| ||||| |||||| ||| |||||||||||||||||||||||  |  ||||| |||| || | |    
T  462706 tttcatcaaaacaccaacaaca-ttcaaattcttatcctcaattcatgaatatgcatacccaagcaatgattcatcaatcacgacatcaattaacagcca 462804  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
     ||||||||||| |||||||||||| ||||||  ||| ||||| | |  ||||||| | |||   ||||||||||| ||||| |||||| |||||||||     
T  462805 taacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgaacacaattttcacaacttatcatttttacatatttg 462904  T
Q  299 aacatg 304  Q
    ||||||    
T  462905 aacatg 462910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 229 - 304
Target Start/End: Complemental strand, 19689567 - 19689492
Alignment:
Q  229 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||    
T  19689567 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatg 19689492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 229 - 304
Target Start/End: Original strand, 23820168 - 23820243
Alignment:
Q  229 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||    
T  23820168 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatg 23820243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 100 - 222
Target Start/End: Complemental strand, 19886945 - 19886824
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  |    
T  19886945 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 19886847  T
Q  200 caacatcaattgcacaagaatca 222  Q
     ||||||| ||| ||||||||||    
T  19886846 taacatcatttgaacaagaatca 19886824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 100 - 230
Target Start/End: Complemental strand, 43643250 - 43643123
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||| ||||||||||||| |   ||||||| ||||||||||| |||||| ||| ||||||||||| |||||||||||||| |||||| |||| || |||    
T  43643250 tttcatcaaaacaccaacatc---tcaaattatcatcatcaattcatgaatatgcatacccaagcagtgattcatcaactacaacatcaattaacagcaa 43643154  T
Q  200 caacatcaattgcacaagaatcatagctcaa 230  Q
     | ||||||||| |||||||||||| |||||    
T  43643153 tagcatcaattgaacaagaatcatatctcaa 43643123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 229 - 304
Target Start/End: Complemental strand, 14906606 - 14906531
Alignment:
Q  229 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| |||||||    
T  14906606 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatg 14906531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 229 - 304
Target Start/End: Original strand, 20015108 - 20015183
Alignment:
Q  229 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| |||||||    
T  20015108 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatg 20015183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 14906665 - 14906593
Alignment:
Q  2 aatgagatggacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    ||||||||  |||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  14906665 aatgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaac 14906593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 20015049 - 20015121
Alignment:
Q  2 aatgagatggacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    ||||||||  |||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  20015049 aatgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaac 20015121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 23820109 - 23820181
Alignment:
Q  2 aatgagatggacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    ||||||||  |||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  23820109 aatgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaac 23820181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 19689600 - 19689554
Alignment:
Q  28 acaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  19689600 acaatcataacatataatcatacactccatcataattcaacaacaac 19689554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 100 - 297
Target Start/End: Complemental strand, 20627609 - 20627411
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||| ||||||||||||||||  ||||||| ||||| ||||| |||||| ||  |||||||||||||||||||||||| | |||| | |||| || | |    
T  20627609 tttcatcaaaacaccaacaacatctcaaattatcatcctcaattcatgaatatccatacccaagcaatgattcatcaaccacaacaccaattaacaacca 20627510  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccattttgcacaattttcataacttctcatttctacatattt 297  Q
     || |||||||| |||||||| | | ||||| | ||| ||||| |  | ||||||| | |||  |||||||||||| || || |||||| |||||||||    
T  20627509 taaaatcaattgaacaagaattaaatctcaaattaacaacaacttaacaaaattcaccaattgagcacaattttcacaagttatcatttttacatattt 20627411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 167
Target Start/End: Complemental strand, 17396948 - 17396882
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaat 167  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||||||||| ||| | |||||||||||    
T  17396948 tttcaccaaaacaccaaca-caactcaaattctcatcaacaatccatgaatatgcaaacccaagcaat 17396882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 19669335 - 19669279
Alignment:
Q  155 atacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattg 211  Q
    |||||||||| |||| |||||||| ||||||||  |||||| |||||||||||||||    
T  19669335 atacccaagccatgaatcatcaacaataacatcacttagcaacaacaacatcaattg 19669279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 25601911 - 25601972
Alignment:
Q  13 catcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    |||||||||| |||||||| || ||| ||| ||||| || ||||||||| ||||||||||||    
T  25601911 catcaacaattaaccacaaccacaacttatgatcatgcattccatcatatttcaacaacaac 25601972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 121
Target Start/End: Original strand, 32465813 - 32465845
Alignment:
Q  89 caattcacaaatttcaccaaaacaccaacaaca 121  Q
    ||||||| |||||||||||||||||||||||||    
T  32465813 caattcataaatttcaccaaaacaccaacaaca 32465845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 2e-43; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 104 - 304
Target Start/End: Complemental strand, 22054125 - 22053924
Alignment:
Q  104 accaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaac 203  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||| ||||| |||||||||||||||||||||| | |||||| |||| || ||| |||    
T  22054125 accaaaacaccaacaacaattcaaattttcatcatcaattcatgaatatgtagacccaagcaatgattcatcaacaacaacatcaattaacagcaataac 22054026  T
Q  204 atcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaaca 302  Q
    |||||||| ||| |||||||| ||||||||||| ||||| | |  ||||||| | |||  |||||||||||| |||||| ||||| |||||| || ||||    
T  22054025 atcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaaca 22053926  T
Q  303 tg 304  Q
    ||    
T  22053925 tg 22053924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 89 - 304
Target Start/End: Complemental strand, 27182854 - 27182638
Alignment:
Q  89 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatct 188  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||| ||||||||||||||||||| | ||||||     
T  27182854 caattcaaaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatactcaagcaatgattcatcaaccacaacatca 27182755  T
Q  189 attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcattt 287  Q
    |||| || | | ||||||||||| |||||||||||| ||||||  ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| ||||||    
T  27182754 attaacagccataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcattt 27182655  T
Q  288 ctacatatttaaacatg 304  Q
     | | ||||| ||||||    
T  27182654 gttcctatttgaacatg 27182638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 100 - 304
Target Start/End: Original strand, 23506932 - 23507137
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||||| | |||||| |||| || | |    
T  23506932 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaacca 23507031  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| |||||||||     
T  23507032 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 23507131  T
Q  299 aacatg 304  Q
    ||||||    
T  23507132 aacatg 23507137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 108 - 304
Target Start/End: Complemental strand, 18531355 - 18531158
Alignment:
Q  108 aaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatca 207  Q
    ||||||||||||||||||||||| ||||||||||| |||||| |||||||||| ||||||||||||||||| | |||||| |||| || ||| |||||||    
T  18531355 aaacaccaacaacaattcaaattttcatcatcaattcatgaatatgtatacccgagcaatgattcatcaacaacaacatcaattaacagcaataacatca 18531256  T
Q  208 attgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    |||| ||| |||||||| ||||||||||| ||||| | |  ||||||| | |||   ||||||||||| |||||| ||||| |||||| || ||||||    
T  18531255 attgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgaacacaattttcacaacttcacatttttacataattgaacatg 18531158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 13 - 209
Target Start/End: Complemental strand, 17471956 - 17471768
Alignment:
Q  13 catcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaattcacaaatttcaccaaaaca 112  Q
    |||||||||| |||||||| || ||| ||| ||||| || ||||||||  |||||||||||| | |||||        |||||| |||||||||||||||    
T  17471956 catcaacaattaaccacaaccacaacttatgatcatgcattccatcatgtttcaacaacaacatgtcata--------attcaccaatttcaccaaaaca 17471865  T
Q  113 ccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaat 209  Q
    |||||||||||||||||||||||||||||| |||||| |||  |||||||||||||||||||  || ||||||||  ||| ||  ||||||||||||    
T  17471864 ccaacaacaattcaaattctcatcatcaattcatgaatatgcgtacccaagcaatgattcattcacaataacatcagttaacaataacaacatcaat 17471768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 103 - 234
Target Start/End: Original strand, 34939248 - 34939379
Alignment:
Q  103 caccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaa 202  Q
    |||||||||||||||||||||||||||| |||||| | || |||||| ||| ||||||||||| |||||||||||| | |||||| |||| || ||| ||    
T  34939248 caccaaaacaccaacaacaattcaaattttcatcacctattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacagcaataa 34939347  T
Q  203 catcaattgcacaagaatcatagctcaattca 234  Q
    |||||| || |||||||||||| |||||||||    
T  34939348 catcaactgaacaagaatcataactcaattca 34939379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 20623007 - 20623079
Alignment:
Q  2 aatgagatggacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    ||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20623007 aatgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 20623079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 21233753 - 21233681
Alignment:
Q  2 aatgagatggacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    ||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21233753 aatgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 21233681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 100 - 304
Target Start/End: Complemental strand, 18778276 - 18778071
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | ||  ||  |    
T  18778276 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataatattca 18778178  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 297  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| |    
T  18778177 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat 18778078  T
Q  298 aaacatg 304  Q
     ||||||    
T  18778077 gaacatg 18778071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 229 - 304
Target Start/End: Original strand, 20623066 - 20623141
Alignment:
Q  229 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||    
T  20623066 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatg 20623141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 229 - 304
Target Start/End: Complemental strand, 21233694 - 21233619
Alignment:
Q  229 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||    
T  21233694 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatg 21233619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 100 - 304
Target Start/End: Complemental strand, 22366765 - 22366560
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  |    
T  22366765 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 22366667  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 297  Q
     ||||||| ||| ||||| |||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| |    
T  22366666 taacatcatttgaacaagcatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat 22366567  T
Q  298 aaacatg 304  Q
     ||||||    
T  22366566 gaacatg 22366560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 100 - 304
Target Start/End: Original strand, 25426596 - 25426801
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  |    
T  25426596 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 25426694  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 297  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| |  ||| ||||||| |||||||||| |||||| | ||||| |    
T  25426695 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcatttttgcatatat 25426794  T
Q  298 aaacatg 304  Q
     ||||||    
T  25426795 gaacatg 25426801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 100 - 222
Target Start/End: Original strand, 12342 - 12463
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  |    
T  12342 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 12440  T
Q  200 caacatcaattgcacaagaatca 222  Q
     ||||||| ||| ||||||||||    
T  12441 taacatcatttgaacaagaatca 12463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 100 - 222
Target Start/End: Complemental strand, 21073879 - 21073758
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  |    
T  21073879 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattga 21073781  T
Q  200 caacatcaattgcacaagaatca 222  Q
     ||||||| ||| ||||||||||    
T  21073780 taacatcatttgaacaagaatca 21073758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 29190552 - 29190478
Alignment:
Q  107 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactat 181  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||||||    
T  29190552 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactat 29190478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 232 - 304
Target Start/End: Original strand, 37052844 - 37052916
Alignment:
Q  232 tcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||    
T  37052844 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcatttccacatattcaaacatg 37052916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 229 - 304
Target Start/End: Original strand, 16536294 - 16536369
Alignment:
Q  229 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| |||||||    
T  16536294 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatg 16536369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 25900630 - 25900558
Alignment:
Q  2 aatgagatggacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    ||||||||  |||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  25900630 aatgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaac 25900558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 37052782 - 37052854
Alignment:
Q  2 aatgagatggacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    ||||||||  |||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  37052782 aatgagatcaacatcatcaatcaaccacaatcataacatataatcataccctccatcataactcaacaacaac 37052854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 100 - 304
Target Start/End: Original strand, 19499867 - 19500072
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||| ||||||| ||| |||||  |||| ||| | || |||  |    
T  19499867 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcataccaaagcaattattaatcaatcataatatcaaataacattca 19499965  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 297  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| |  ||| ||||||| |||||||||| |||||| | ||||| |    
T  19499966 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcatttttgcatatat 19500065  T
Q  298 aaacatg 304  Q
     ||||||    
T  19500066 gaacatg 19500072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 100 - 242
Target Start/End: Complemental strand, 43443679 - 43443538
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||| ||| | ||||||||||| |||||||||  |||| ||| | || |||  |    
T  43443679 tttcaccaaaacaccaaca-caattcaaatcctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca 43443581  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaac 242  Q
     ||||||| ||| |||||| ||| | ||||| ||||| |||||    
T  43443580 taacatcatttgaacaagactcacatctcaaatcaacaacaac 43443538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 119 - 304
Target Start/End: Complemental strand, 4200251 - 4200064
Alignment:
Q  119 acaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaaga 218  Q
    ||||||||||||||||||||||| ||||||| ||| | ||||||||||| |||||||||  |||| ||| | || |||  | ||||||||||| ||| ||    
T  4200251 acaattcaaattctcatcatcaacccatgaatatgcaaacccaagcaatcattcatcaatcataatatcaaataacattcataacatcaattgaacatga 4200152  T
Q  219 atcatagctcaattcaactacaacat--gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    |||| | ||||| ||||| |||||||  |  ||||||| | |||| ||| ||| |||||||||| |||||| | ||||| | ||||||    
T  4200151 atcacatctcaaatcaacaacaacataagagaaattcaccaatttagcataatattcataacttatcatttttgcatatatgaacatg 4200064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 16536235 - 16536307
Alignment:
Q  2 aatgagatggacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    ||||||||  |||||| |||||||| |||||||||||||| |||||||| |||||||||||||||||||||||    
T  16536235 aatgagatcaacatcatcaatcaactacaatcataacatacaatcataccctccatcataattcaacaacaac 16536307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 304
Target Start/End: Original strand, 27009809 - 27010014
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||||||||| ||| | ||||||||||| |||||| ||  |||| ||| | || |||  |    
T  27009809 tttcaccaaaacaccaaca-caactcaaattctcatcaacaatccatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattca 27009907  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 297  Q
     ||||||| ||| ||||| |||| | ||||| | ||| |||||  | |  ||||||| | |||  | ||||| |||||||||| |||||| |||||||||    
T  27009908 taacatcatttgaacaagcatcacatctcaaattaacaacaacttaggagaaattcaccaattgagtacaatattcataacttatcatttttacatattt 27010007  T
Q  298 aaacatg 304  Q
    |||||||    
T  27010008 aaacatg 27010014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 229 - 303
Target Start/End: Complemental strand, 25900571 - 25900498
Alignment:
Q  229 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacat 303  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||  ||||||| ||||||    
T  25900571 aattcaacaacaacatgtcaa-ttcatccattttgcacaattttcataacttttcattttcacatattcaaacat 25900498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 244
Target Start/End: Original strand, 19862186 - 19862319
Alignment:
Q  111 caccaacaacaattcaaattctcatcatcaatccatgaac-atgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaat 209  Q
    |||||||||||| |||  |||||||||||||  ||||||  ||| | |||||||  |||| |||||||| |||| |||  |||||| |||||||||||||    
T  19862186 caccaacaacaactcat-ttctcatcatcaaatcatgaattatgaacacccaagtcatgaatcatcaacaataatatcacttagcaacaacaacatcaat 19862284  T
Q  210 tgcacaagaatcatagctcaattcaactacaacat 244  Q
    |||||| || || || | ||||||||| |||||||    
T  19862285 tgcacatgattcttatcacaattcaacaacaacat 19862319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 244
Target Start/End: Original strand, 23493885 - 23494029
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaac-atgtatacccaagcaatgattcatcaactataacatctattagcatca 198  Q
    |||||||||| || ||||||||| | |  |||||||||||||  ||||||  ||| | |||||||| |||| |||||| | | ||||||  |||||| ||    
T  23493885 tttcaccaaaccaacaacaacaacttat-ttctcatcatcaaatcatgaattatgaacacccaagccatgaatcatcatcaacaacatcacttagcaaca 23493983  T
Q  199 acaacatcaattgcacaagaatcatagctcaattcaactacaacat 244  Q
    ||||||||||||| ||| ||||| || | ||||||||| |||||||    
T  23493984 acaacatcaattgaacatgaatcttatcacaattcaacaacaacat 23494029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 2031697 - 2031758
Alignment:
Q  13 catcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    |||||||||| |||||||| || ||| ||| ||||| || ||||||||| ||||||||||||    
T  2031697 catcaacaattaaccacaaccacaacttatgatcatgcattccatcatatttcaacaacaac 2031758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 89 - 231
Target Start/End: Original strand, 9338 - 9480
Alignment:
Q  89 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatct 188  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| | ||||||     
T  9338 caattcaccattttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatca 9437  T
Q  189 attagcatcaacaacatcaattgcacaagaatcatagctcaat 231  Q
    |||| || | | ||||||||||| |||||||||||| ||||||    
T  9438 attaacagccataacatcaattgaacaagaatcataactcaat 9480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 2e-40; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 89 - 304
Target Start/End: Original strand, 23153403 - 23153619
Alignment:
Q  89 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatct 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||| ||||||||||||| |||||||||||||| | ||||||     
T  23153403 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatccttaattcatgaatatgtatacccaagtaatgattcatcaaccacaacatca 23153502  T
Q  189 attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcattt 287  Q
    |||| || | | || |||||||| |||||||||||| ||||||  ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| ||||||    
T  23153503 attaacagccataatatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcattt 23153602  T
Q  288 ctacatatttaaacatg 304  Q
     | | ||||| ||||||    
T  23153603 gttcctatttgaacatg 23153619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 107 - 304
Target Start/End: Complemental strand, 14626407 - 14626209
Alignment:
Q  107 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 206  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | ||||||    
T  14626407 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc 14626308  T
Q  207 aattgcacaagaatcatagctcaattcaactacaacatgtca-aattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    |||||  ||||||||| | ||||| | ||| ||||| |  || |||||| | |||   ||||||||||||||||| |||||| ||||||||| ||||||    
T  14626307 aattgagcaagaatcaaatctcaagttaacaacaacttagcataattcaccaattgcacacaattttcataacttatcatttttacatatttgaacatg 14626209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 100 - 304
Target Start/End: Complemental strand, 35009735 - 35009530
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || |||    
T  35009735 tttcaccaaaacaccaacaataattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacaacaa 35009636  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
    |||||||||||| ||| |  ||  | |  |||||||| ||||||| |  ||||||| | |||  |||||||||||| |||||| ||||| |||||| ||     
T  35009635 caacatcaattgaacatggttctcatcataattcaacaacaacatagcaaaattcaccaattgagcacaattttcaaaacttcacatttttacataattg 35009536  T
Q  299 aacatg 304  Q
    ||||||    
T  35009535 aacatg 35009530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 103 - 304
Target Start/End: Complemental strand, 1658040 - 1657839
Alignment:
Q  103 caccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaa 202  Q
    |||||||||||||||||||||||||||| |||||| | || |||||| ||| ||||||||||| |||||||||||| | |||||| |||| || ||| ||    
T  1658040 caccaaaacaccaacaacaattcaaattttcatcacctattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataa 1657941  T
Q  203 catcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaac 301  Q
    |||||| || |||||||||||| |||||||| || | ||| | |  |||| |||| |||  ||||||||||||||||||| ||||| |||||| || |||    
T  1657940 catcaactgaacaagaatcataactcaattc-acaataacttagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaac 1657842  T
Q  302 atg 304  Q
    |||    
T  1657841 atg 1657839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 100 - 304
Target Start/End: Original strand, 25175531 - 25175736
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  |    
T  25175531 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 25175629  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 297  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| |    
T  25175630 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat 25175729  T
Q  298 aaacatg 304  Q
     ||||||    
T  25175730 gaacatg 25175736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 107 - 304
Target Start/End: Complemental strand, 1650382 - 1650184
Alignment:
Q  107 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 206  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||| ||||||||||| |||||||||||| | |||||| | || || ||| ||||||    
T  1650382 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatc 1650283  T
Q  207 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    |||||  ||||||||| | ||||| | ||| | ||| | |  ||||||| | |||  |||||||||||| ||||| |||||  ||||||||| ||||||    
T  1650282 aattgagcaagaatcaaatctcaaattaaccataacttagcaaaattcaccaattgagcacaattttcacaacttatcattcttacatatttgaacatg 1650184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 103 - 304
Target Start/End: Original strand, 15862443 - 15862643
Alignment:
Q  103 caccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaa 202  Q
    |||||||||||||||||||||||||||| |||||| | || |||||| ||| ||||||||||| |||||||||||| | |||||| |||| || ||| ||    
T  15862443 caccaaaacaccaacaacaattcaaattttcatcacctattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattatcagcaataa 15862542  T
Q  203 catcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaac 301  Q
    ||| || || |||||||||||| |||||||| || | ||| | |  |||| |||| |||  ||||||||||||||||||| ||||| |||||| || |||    
T  15862543 cat-aaatgaacaagaatcataactcaattc-acaataacttagcaaaatccatcaattgagcacaattttcataacttcacatttatacataattgaac 15862640  T
Q  302 atg 304  Q
    |||    
T  15862641 atg 15862643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 103 - 236
Target Start/End: Original strand, 27740808 - 27740941
Alignment:
Q  103 caccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaa 202  Q
    |||||||||||||||| ||||||||||| ||||||||||| |||||| ||| |||||||| | |||||||||| || | ||||||   ||  | |||| |    
T  27740808 caccaaaacaccaacaccaattcaaattttcatcatcaattcatgaatatgcatacccaaaccatgattcatccacaacaacatcagataatagcaacca 27740907  T
Q  203 catcaattgcacaagaatcatagctcaattcaac 236  Q
    ||||||||| ||| |||||||| |||||||||||    
T  27740908 catcaattgaacatgaatcatatctcaattcaac 27740941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 100 - 304
Target Start/End: Complemental strand, 27654267 - 27654062
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||| ||| ||||||||||||||||||| |||||||||| ||| ||||||||||||| |||||||||  |||| ||| | || |||  |    
T  27654267 tttcaccaaaacaccgaca-caattcaaattctcatcattaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 27654169  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 297  Q
     ||||||| | | |||||||||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| |    
T  27654168 taacatcattggaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat 27654069  T
Q  298 aaacatg 304  Q
     ||||||    
T  27654068 gaacatg 27654062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 177
Target Start/End: Complemental strand, 16826038 - 16825962
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaa 177  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||| | ||||||| |||||||||    
T  16826038 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcataacaaagcaattattcatcaa 16825962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 89 - 243
Target Start/End: Complemental strand, 18381975 - 18381821
Alignment:
Q  89 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaac-atgtatacccaagcaatgattcatcaactataacatc 187  Q
    |||||||| |||||||| ||| |||||||||||| |||  ||||||||| |||  ||||||  ||| |||||||||| |||| |||||||| | ||||||    
T  18381975 caattcaccaatttcacaaaaccaccaacaacaactcat-ttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatc 18381877  T
Q  188 tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 243  Q
      |||||| ||||||||||||||| ||| || || || | ||||||||| ||||||    
T  18381876 acttagcaacaacaacatcaattgaacatgactcttatcacaattcaacaacaaca 18381821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 15889914 - 15889853
Alignment:
Q  13 catcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    ||||||||||||||||||| || ||| ||||||||| || ||||||| |||||| |||||||    
T  15889914 catcaacaatcaaccacaaccacaacttataatcatgcattccatcacaattcatcaacaac 15889853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 220
Target Start/End: Complemental strand, 22362032 - 22361926
Alignment:
Q  114 caacaacaattcaaattctcatcatcaatccatgaac-atgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgc 212  Q
    ||||||||| |||| |||||||||||||| ||||||  ||| | |||||||| |||| |||||||| | || |||  |||||| |||||||||||||||     
T  22362032 caacaacaactcaa-ttctcatcatcaattcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattga 22361934  T
Q  213 acaagaat 220  Q
    ||| ||||    
T  22361933 acatgaat 22361926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 25640760 - 25640702
Alignment:
Q  16 caacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    ||||||||||||||||  | ||| ||||||||| || ||||||| ||||||||||||||    
T  25640760 caacaatcaaccacaacaacaacttataatcatgcattccatcaaaattcaacaacaac 25640702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 118
Target Start/End: Original strand, 32898745 - 32898774
Alignment:
Q  89 caattcacaaatttcaccaaaacaccaaca 118  Q
    ||||||||||||||||||||||||||||||    
T  32898745 caattcacaaatttcaccaaaacaccaaca 32898774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 15005114 - 15005034
Alignment:
Q  13 catcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaatt 93  Q
    |||||| ||||||| |||| || ||| ||||||||| || || |||| |||||||||||||| | ||||| ||| ||||||    
T  15005114 catcaataatcaactacaaccacaacttataatcattcattctatcacaattcaacaacaacatgtcataattcatcaatt 15005034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 22585754 - 22585674
Alignment:
Q  13 catcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaatt 93  Q
    |||||||||||||| | || || ||| ||||||||| || | ||||| |||||||||||||| | ||||| ||| ||||||    
T  22585754 catcaacaatcaactataaccacaacttataatcatgcattgcatcacaattcaacaacaacatgtcataattcttcaatt 22585674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 22590585 - 22590505
Alignment:
Q  13 catcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaatt 93  Q
    |||||||||||||| | || || ||| ||||||||| || | ||||| |||||||||||||| | ||||| ||| ||||||    
T  22590585 catcaacaatcaactataaccacaacttataatcatgcattgcatcacaattcaacaacaacatgtcataattcttcaatt 22590505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 244
Target Start/End: Complemental strand, 25367490 - 25367374
Alignment:
Q  129 ttctcatcatcaatccatgaa-catgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagct 227  Q
    ||||||||| |||| |||||| |||| | |||||||| |||| | ||| |  | ||||||  |||||| ||||||||||||||| ||| ||||| || |     
T  25367490 ttctcatcaacaattcatgaatcatgcacacccaagccatgaattatcgataacaacatcacttagcaacaacaacatcaattgaacatgaatcttatca 25367391  T
Q  228 caattcaactacaacat 244  Q
    ||||||||| |||||||    
T  25367390 caattcaacaacaacat 25367374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 2e-39; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 100 - 242
Target Start/End: Original strand, 20445646 - 20445788
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | |    
T  20445646 tttcaccaaaacaccaacaacaattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacagcca 20445745  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaac 242  Q
     |||||||||||  ||||||||||| | ||||||||| |||||    
T  20445746 taacatcaattgatcaagaatcataacacaattcaacaacaac 20445788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 100 - 242
Target Start/End: Original strand, 20531411 - 20531553
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | |    
T  20531411 tttcaccaaaacaccaacaacaattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacagcca 20531510  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaac 242  Q
     |||||||||||  ||||||||||| | ||||||||| |||||    
T  20531511 taacatcaattgatcaagaatcataacacaattcaacaacaac 20531553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 100 - 304
Target Start/End: Original strand, 20931312 - 20931517
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||| ||| ||||||||| ||| |||||||||| | |||||| |||| || | |    
T  20931312 tttcaccaaaacaccaacaacaattcaaattctcatcattaattcatgaatatgcatacccaagaaattattcatcaaccacaacatcaattaacaacca 20931411  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||  | |  ||||||| | |||| |||||||||||||||||| |||||| ||||||| |     
T  20931412 taacatcaattgaacaagaatcaaatctcaaattaacaacaatttagcaaaattcaccaatttagcacaattttcataacttatcatttttacatatatg 20931511  T
Q  299 aacatg 304  Q
    ||||||    
T  20931512 aacatg 20931517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 100 - 304
Target Start/End: Original strand, 22227777 - 22227981
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| | ||||||||||| |||||||||  |||||||| |||| |||  |    
T  22227777 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattca 22227875  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | |  ||||||| | |||   ||||||||||||||||| |||||| |||||||||     
T  22227876 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaacaattggacacaattttcataacttatcatttttacatatttg 22227975  T
Q  299 aacatg 304  Q
    ||||||    
T  22227976 aacatg 22227981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 100 - 304
Target Start/End: Original strand, 22232474 - 22232678
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| | ||||||||||| |||||||||  |||||||| |||| |||  |    
T  22232474 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattca 22232572  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | |  ||||||| | |||   ||||||||||||||||| |||||| |||||||||     
T  22232573 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaacaattggacacaattttcataacttatcatttttacatatttg 22232672  T
Q  299 aacatg 304  Q
    ||||||    
T  22232673 aacatg 22232678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 89 - 304
Target Start/End: Complemental strand, 20893933 - 20893717
Alignment:
Q  89 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatct 188  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||  ||||| ||| |||||||| ||||||||||||||| | ||||||     
T  20893933 caattcacaaatttcttcaaaacaccaacaacaattcaaattctcatcatcaatttatgaatatgcatacccaaacaatgattcatcaaccacaacatca 20893834  T
Q  189 attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcattt 287  Q
    |||| ||   | ||||||||||| ||||||||||||  |||||  ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| ||||||    
T  20893833 attaacagtcataacatcaattgaacaagaatcataaatcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcattt 20893734  T
Q  288 ctacatatttaaacatg 304  Q
     | | ||||| ||||||    
T  20893733 gttcctatttgaacatg 20893717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 100 - 222
Target Start/End: Original strand, 20913004 - 20913126
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||||| | || ||| |||| || | |    
T  20913004 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaagatcaattaacaacca 20913103  T
Q  200 caacatcaattgcacaagaatca 222  Q
     ||||||||||| ||||||||||    
T  20913104 taacatcaattgaacaagaatca 20913126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 2116228 - 2116343
Alignment:
Q  107 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 206  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | ||||||    
T  2116228 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc 2116327  T
Q  207 aattgcacaagaatca 222  Q
    |||||  |||||||||    
T  2116328 aattgagcaagaatca 2116343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 100 - 231
Target Start/End: Complemental strand, 37844746 - 37844616
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||| |||||||||||||||| |||||||||||||| ||||| |||||| ||| ||||||||||||||| |||||||| | |||||| |||| || | |    
T  37844746 tttcatcaaaacaccaacaaca-ttcaaattctcatcctcaattcatgaatatgcatacccaagcaatgactcatcaaccacaacatcaattaacaacca 37844648  T
Q  200 caacatcaattgcacaagaatcatagctcaat 231  Q
     ||||||||||| |||||||||||| ||||||    
T  37844647 taacatcaattgaacaagaatcataactcaat 37844616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 103 - 304
Target Start/End: Original strand, 41394191 - 41394394
Alignment:
Q  103 caccaaaacaccaacaacaattcaaa-ttctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaaca 201  Q
    |||||||||||||||||||||||||| || |||||||||||||||||| ||| |||||||| || |||||||||||| | |||||| | || || ||| |    
T  41394191 caccaaaacaccaacaacaattcaaaattttcatcatcaatccatgaatatgcatacccaatcagtgattcatcaacaacaacatcaaataacaacaata 41394290  T
Q  202 acatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaa 300  Q
    ||||||||||  ||||||||| | |||||   ||| | ||| | |  ||||||| | |||  |||||||||||| ||||| |||||| ||||||||| ||    
T  41394291 acatcaattgagcaagaatcaaatctcaacataacaataacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaa 41394390  T
Q  301 catg 304  Q
    ||||    
T  41394391 catg 41394394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 229 - 304
Target Start/End: Original strand, 51452589 - 51452664
Alignment:
Q  229 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||    
T  51452589 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatg 51452664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 107 - 187
Target Start/End: Original strand, 45051416 - 45051496
Alignment:
Q  107 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatc 187  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||| ||||||||||| |||||||||||| ||||||||    
T  45051416 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcagtgattcatcaacaataacatc 45051496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 51452530 - 51452602
Alignment:
Q  2 aatgagatggacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    ||||||||  |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  51452530 aatgagatcaacatcatcaatcaactacaatcataacatataatcatacactccatcataattcaacaacaac 51452602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 100 - 174
Target Start/End: Complemental strand, 5072672 - 5072599
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcat 174  Q
    ||||||||||||||||||| ||| || ||||||||||||||||||||||| ||| | ||||||||||| ||||||    
T  5072672 tttcaccaaaacaccaaca-caactctaattctcatcatcaatccatgaatatgcaaacccaagcaattattcat 5072599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 100 - 174
Target Start/End: Complemental strand, 18601402 - 18601329
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcat 174  Q
    ||||||||||||||||||| ||| || ||||||||||||||||||||||| ||| | ||||||||||| ||||||    
T  18601402 tttcaccaaaacaccaaca-caactctaattctcatcatcaatccatgaatatgcaaacccaagcaattattcat 18601329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 121
Target Start/End: Original strand, 49967607 - 49967638
Alignment:
Q  90 aattcacaaatttcaccaaaacaccaacaaca 121  Q
    ||||||||||||||||||||||||||||||||    
T  49967607 aattcacaaatttcaccaaaacaccaacaaca 49967638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 104 - 304
Target Start/End: Original strand, 8820 - 9021
Alignment:
Q  104 accaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaac 203  Q
    |||||||||||||||| |||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||| | |||||| ||||  | ||| |||    
T  8820 accaaaacaccaacaaaaattcaaattttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaatagcaataac 8919  T
Q  204 atcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaaca 302  Q
    |||||||| |||  ||||||| ||||||||||| ||||| | |  ||||||| | |||  |||||||||||| |||||| ||||| |||||| || ||||    
T  8920 atcaattgaacattaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaaca 9019  T
Q  303 tg 304  Q
    ||    
T  9020 tg 9021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 100 - 304
Target Start/End: Original strand, 148688 - 148893
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||  |||||||||||||||||||||||| | ||| || |||| || | |    
T  148688 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatacatacccaagcaatgattcatcaaccacaacttcaattaacaacca 148787  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| |||||||||     
T  148788 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 148887  T
Q  299 aacatg 304  Q
    ||||||    
T  148888 aacatg 148893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 100 - 231
Target Start/End: Original strand, 48565 - 48696
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| ||||  | | |    
T  48565 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatagcca 48664  T
Q  200 caacatcaattgcacaagaatcatagctcaat 231  Q
     ||||||||||| |||||||||||| ||||||    
T  48665 taacatcaattgaacaagaatcataactcaat 48696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 177
Target Start/End: Original strand, 36065 - 36137
Alignment:
Q  104 accaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaa 177  Q
    |||| |||||||||| |||||||||||||||||||||||||||||| ||| | ||||||||||| |||||||||    
T  36065 accataacaccaaca-caattcaaattctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaa 36137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 100 - 304
Target Start/End: Original strand, 1091 - 1296
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| | ||||||||||| |||||||||| | || ||| |||| || | |    
T  1091 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcacacccaagcaattattcatcaaccacaatatcaattaacaacca 1190  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| |||||||||     
T  1191 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 1290  T
Q  299 aacatg 304  Q
    ||||||    
T  1291 aacatg 1296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 100 - 304
Target Start/End: Complemental strand, 3877 - 3673
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| ||||||||| |||| |||||||||||| || ||| ||||||||||||| |||| ||||  | |||||| |||| |||| |    
T  3877 tttcaccaaaacaccaaca-caattcaaactctcctcatcaatccatcaatatgcatacccaagcaattattcctcaatcacaacatcaattaacatcca 3779  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | |  ||||| | | |||  |||||||||||| ||||| |||||| |||||||||     
T  3778 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaatttaccaattgagcacaattttcacaacttatcatttttacatatttg 3679  T
Q  299 aacatg 304  Q
    ||||||    
T  3678 aacatg 3673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 100 - 304
Target Start/End: Original strand, 12083 - 12285
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| ||  |||||||| |||| |||  |    
T  12083 tttcactaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatgaatcataacatcaattaacattca 12181  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
     ||||||||||| |||||||||| | |||||||  || ||||| |  | ||||||| | |||| |||||||||||| ||||| |||||| |||| |||||    
T  12182 taacatcaattgaacaagaatcaaatctcaatt--acaacaacttaacaaaattcaccaatttagcacaattttcacaacttatcatttttacacattta 12279  T
Q  299 aacatg 304  Q
    ||||||    
T  12280 aacatg 12285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 100 - 304
Target Start/End: Original strand, 48155 - 48359
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||| ||||| |||||||||  | |||||| |||| |||| |    
T  48155 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaggcaattattcatcaatcacaacatcaattaacatcta 48253  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| |  | ||||||| | |||  |||||||||||| ||||| |||||| |||| ||||     
T  48254 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttaacaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttg 48353  T
Q  299 aacatg 304  Q
    ||||||    
T  48354 aacatg 48359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 73; Significance: 2e-33; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 100 - 232
Target Start/End: Complemental strand, 128464 - 128332
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||| |||| |||||||||  | |||||| |||| |||| |    
T  128464 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaatcaattattcatcaatcacaacatccattaacatcca 128365  T
Q  200 caacatcaattgcacaagaatcatagctcaatt 232  Q
     ||||||||||| |||||||||| | |||||||    
T  128364 taacatcaattgaacaagaatcaaatctcaatt 128332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 242
Target Start/End: Complemental strand, 31942 - 31819
Alignment:
Q  119 acaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaaga 218  Q
    |||||||||||||||||||| |||||||||| ||| | ||||||||||| |||||||||  |||| ||  | || |||  | ||||||||||| ||| ||    
T  31942 acaattcaaattctcatcattaatccatgaatatgcaaacccaagcaattattcatcaatcataatattaaataacattcataacatcaattgaacatga 31843  T
Q  219 atcatagctcaattcaactacaac 242  Q
    |||| | ||||| ||||| |||||    
T  31842 atcacatctcaaatcaacaacaac 31819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 121
Target Start/End: Original strand, 22650 - 22678
Alignment:
Q  93 tcacaaatttcaccaaaacaccaacaaca 121  Q
    |||||||||||||||||||||||||||||    
T  22650 tcacaaatttcaccaaaacaccaacaaca 22678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 100 - 304
Target Start/End: Original strand, 8846 - 9050
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||||  | |||||| |||| |||| |    
T  8846 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatacatgaatatgcatacccaagcaattattcatcaatcacaacatcaattaacatcca 8944  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| |  | ||||||| | |||  |||||||||||| |||||  ||||| |||||| ||     
T  8945 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttaacaaaattcaccaattgagcacaattttcacaacttaacatttttacataattg 9044  T
Q  299 aacatg 304  Q
    ||||||    
T  9045 aacatg 9050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 100 - 304
Target Start/End: Complemental strand, 5356 - 5152
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||| |||||||||||||||| |||||||||||||| ||||| |||||| ||| |||||||||||||||||||||||  | |||||| |||| || | |    
T  5356 tttcatcaaaacaccaacaaca-ttcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagcca 5258  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaac-atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
     ||||||||||| |||||||||||| |||| |  ||| |||||  ||  ||||||| | |||  |||||||||||| ||||| |||||| |||||||||     
T  5257 taacatcaattgaacaagaatcataactcattctaacaacaactttgcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 5158  T
Q  299 aacatg 304  Q
    ||||||    
T  5157 aacatg 5152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 100 - 304
Target Start/End: Complemental strand, 1250 - 1047
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||| ||| ||||||||||||| |||||||||  |||||||  |||| |||| |    
T  1250 tttcaccaaaacaccaa-aacaattcaaattttcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataacataaattaacatcca 1152  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
     ||||||| ||| |||||||| | | ||||||| ||| ||||| | |  ||||||||| |||  |||||||||||| ||||| | |||| |||||||||     
T  1151 taacatcacttgaacaagaataaaatctcaatt-aacaacaacttagcaaaattcatcaattgagcacaattttcacaacttattatttttacatatttg 1053  T
Q  299 aacatg 304  Q
    ||||||    
T  1052 aacatg 1047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 89 - 297
Target Start/End: Original strand, 41686 - 41894
Alignment:
Q  89 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatct 188  Q
    |||||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||| ||| |||||||| ||||||||||||| ||| |||| |     
T  41686 caattcacaa-tttcaccaaaacaccaacaacaattcaaattctaataatcaattcatgaatatgcatacccaaccaatgattcatcatctacaacaaca 41784  T
Q  189 attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcattt 287  Q
    |||| || | | | ||||||||| |||||||||||| ||||||  ||| ||||| | |  ||||||| | |||  |||||||||||| || || ||||||    
T  41785 attaacagccatagcatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaaattatcattt 41884  T
Q  288 ctacatattt 297  Q
     |||||||||    
T  41885 ttacatattt 41894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 70; Significance: 1e-31; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 100 - 304
Target Start/End: Complemental strand, 123460 - 123255
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| |||||||||| || |||||||||| | |||||| |||| || | |    
T  123460 tttcaccaaaacaccaacaacaattcaaattctcatcttcaattcatgaatatgcatacccaagccattattcatcaaccacaacatcaattaacaacca 123361  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
     ||||||||||| |||||||||||| || |||  ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| | | |||||     
T  123360 taacatcaattgaacaagaatcataacttaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttg 123261  T
Q  299 aacatg 304  Q
    ||||||    
T  123260 aacatg 123255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 121
Target Start/End: Complemental strand, 255106 - 255074
Alignment:
Q  89 caattcacaaatttcaccaaaacaccaacaaca 121  Q
    ||||||||||||||||| |||||||||||||||    
T  255106 caattcacaaatttcacgaaaacaccaacaaca 255074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 121
Target Start/End: Complemental strand, 261712 - 261680
Alignment:
Q  89 caattcacaaatttcaccaaaacaccaacaaca 121  Q
    ||||||||||||||||| |||||||||||||||    
T  261712 caattcacaaatttcacgaaaacaccaacaaca 261680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 107 - 211
Target Start/End: Original strand, 41622 - 41726
Alignment:
Q  107 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 206  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| | ||||||  ||| || ||||||||||    
T  41622 aaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcatttaacaacaacaacatc 41721  T
Q  207 aattg 211  Q
    |||||    
T  41722 aattg 41726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 100 - 231
Target Start/End: Complemental strand, 247738 - 247607
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||||| ||||||||||||||| ||| | |||||| ||| |||||||||||||||||||||||| | |||||| |||| ||   |    
T  247738 tttcaccaaaacaccaacaaccattcaaattctcatcctcagttcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtca 247639  T
Q  200 caacatcaattgcacaagaatcatagctcaat 231  Q
     ||||||||||| |||||||||||| ||||||    
T  247638 taacatcaattgaacaagaatcataactcaat 247607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 102 - 224
Target Start/End: Complemental strand, 828 - 706
Alignment:
Q  102 tcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaaca 201  Q
    ||||||||||||||||||| ||||||||||||||| ||||| | |||| ||| |||||||||||||||||||||||| | |||||| ||||||| | | |    
T  828 tcaccaaaacaccaacaaccattcaaattctcatcctcaattcctgaatatgcatacccaagcaatgattcatcaaccacaacatcaattagcagccata 729  T
Q  202 acatcaattgcacaagaatcata 224  Q
    |||||||||  ||||||||||||    
T  728 acatcaattaaacaagaatcata 706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 67; Significance: 9e-30; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 107 - 304
Target Start/End: Complemental strand, 9626 - 9428
Alignment:
Q  107 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 206  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | ||||||    
T  9626 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc 9527  T
Q  207 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    | |||  ||||||||| | ||||| | ||| | ||| | |  ||||||| | |||  |||| ||||||| ||||| |||||| ||||||||| ||||||    
T  9526 atttgagcaagaatcaaatctcaaattaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatg 9428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 107 - 304
Target Start/End: Complemental strand, 16524 - 16326
Alignment:
Q  107 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 206  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | ||||||    
T  16524 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc 16425  T
Q  207 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    | |||  ||||||||| | ||||| | ||| | ||| | |  ||||||| | |||  |||| ||||||| ||||| |||||| ||||||||| ||||||    
T  16424 atttgagcaagaatcaaatctcaaattaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatg 16326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 100 - 304
Target Start/End: Original strand, 107715 - 107919
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| | ||||||||||| |||||||||  | |||||| |||| |||| |    
T  107715 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcacaacatcaattaacatcca 107813  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | || ||||||| | |||  |||||||||| | ||||| |||||| | || ||||     
T  107814 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttatcaaaattcaccaattgagcacaatttttacaacttatcatttttgcacatttg 107913  T
Q  299 aacatg 304  Q
    ||||||    
T  107914 aacatg 107919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 100 - 304
Target Start/End: Complemental strand, 64812 - 64607
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||||||||| ||| | ||||||||||| |||||| ||  |||| ||| | || |||  |    
T  64812 tttcaccaaaacaccaaca-caactcaaattctcatcaacaatccatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattca 64714  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 297  Q
     ||||||| ||| ||||| |||| | ||||| | ||| |||||  | |  ||||||| | |||  ||||||| |||||||||| |||||| |||||||||    
T  64713 taacatcatttgaacaagcatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatattt 64614  T
Q  298 aaacatg 304  Q
    |||||||    
T  64613 aaacatg 64607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 107 - 304
Target Start/End: Original strand, 2936 - 3135
Alignment:
Q  107 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 206  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||| |||| |||||| |||||||||||| | |||||| | || || ||| ||||||    
T  2936 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacacaagcagtgattcatcaacaacaacatcaaataacaacaataacatc 3035  T
Q  207 aatt-gcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    ||||   ||| |||||||| ||||||||||| ||||| | |  ||||||| | |||  |||||||||||| |||||| ||||| |||||| || ||||||    
T  3036 aattaaaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatg 3135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 100 - 304
Target Start/End: Complemental strand, 6358 - 6155
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| ||||||||||||| |||||||||  ||||||   |||| |||| |    
T  6358 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataacaaaaattaacatcca 6260  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
     ||||||| ||| |||||||||| | ||||||| ||| ||||| | |  ||||||| | |||  |||||||||| | ||||| | |||| |||||||||     
T  6259 taacatcacttgaacaagaatcaaatctcaatt-aacaacaacttagcaaaattcaccaattcagcacaatttttacaacttattatttttacatatttg 6161  T
Q  299 aacatg 304  Q
    ||||||    
T  6160 aacatg 6155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 107 - 304
Target Start/End: Original strand, 13480 - 13678
Alignment:
Q  107 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 206  Q
    |||||||| |||| |||||||||||||||| ||||| |||||| ||| |||||||||  ||||||||||||| | |||||| |||| || ||||||||||    
T  13480 aaaacacctacaaaaattcaaattctcatcgtcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaacaacatc 13579  T
Q  207 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    ||||| ||| |  ||  | |  |||||||| ||||||| |  ||||||||| |||  |||||||||||| |||||| ||||| |||||| || ||||||    
T  13580 aattgaacatggttctcatcataattcaacaacaacatagcaaaattcatcaattgagcacaattttcacaacttcacatttttacataattgaacatg 13678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 100 - 222
Target Start/End: Original strand, 48482 - 48603
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||| ||||||||||||| ||||||||||| |||||||||||||||||| ||| | ||||||||||| |||||||||  |||||||| |||| |||| |    
T  48482 tttcatcaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacatcca 48580  T
Q  200 caacatcaattgcacaagaatca 222  Q
     |||||||| || ||||||||||    
T  48581 taacatcaagtgaacaagaatca 48603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 304
Target Start/End: Complemental strand, 26710 - 26506
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||| |||||||||||||||| | |||||||||||| ||||| ||| || ||| |||||||||||||||||||||||  | |||||| |||| || | |    
T  26710 tttcatcaaaacaccaacaacact-caaattctcatcctcaattcatcaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagcca 26612  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
     ||||||||||| |||||||||||| |||| |  ||| ||||| | |  ||||||| | |||  | |||||||||| ||||| |||||| |||||||||     
T  26611 taacatcaattgaacaagaatcataactcattctaacaacaacttagcaaaattcaccaattgagaacaattttcacaacttatcatttttacatatttg 26512  T
Q  299 aacatg 304  Q
    ||||||    
T  26511 aacatg 26506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 107 - 211
Target Start/End: Complemental strand, 8466 - 8362
Alignment:
Q  107 aaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatc 206  Q
    ||||||||| |||||||||||||||||||||||||| |||| | ||| |||||||||| ||||||||| ||| | |||||| |||| || ||||||||||    
T  8466 aaaacaccagcaacaattcaaattctcatcatcaattcatgtatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatc 8367  T
Q  207 aattg 211  Q
    |||||    
T  8366 aattg 8362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 242
Target Start/End: Complemental strand, 34755 - 34614
Alignment:
Q  103 caccaaaacaccaacaacaattcaaa-ttctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaaca 201  Q
    |||||||||||||||||||||||||| || |||||||||||||||||| ||| ||||||||| | |||||||||||| | |||||| | || || ||| |    
T  34755 caccaaaacaccaacaacaattcaaaattttcatcatcaatccatgaatatgcatacccaagtagtgattcatcaacaacaacatcaaataacaacaata 34656  T
Q  202 acatcaatt-gcacaagaatcatagctcaattcaactacaac 242  Q
    |||||||||   ||| |||||||| ||||||||||| |||||    
T  34655 acatcaattaaaacatgaatcatatctcaattcaacaacaac 34614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 304
Target Start/End: Complemental strand, 5498 - 5295
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| | ||||||||||| |||||| ||  | |||||| |||| |||  |    
T  5498 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgca-acccaagcaattattcattaatcacaacatcaattaacattca 5401  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaac-atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
     ||||||||||| |||||||||| | ||||| | ||| |||||   |  ||||||| | |||   ||||||||||||||||| |||||| |||||||||     
T  5400 taacatcaattgaacaagaatcaaatctcaaattaacaacaactcagcaaaattcaccaattgaacacaattttcataacttatcatttttacatatttg 5301  T
Q  299 aacatg 304  Q
    ||||||    
T  5300 aacatg 5295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 56; Significance: 3e-23; HSPs: 4)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 229 - 304
Target Start/End: Original strand, 22637 - 22712
Alignment:
Q  229 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| |||||||    
T  22637 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatg 22712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 229 - 304
Target Start/End: Original strand, 26892 - 26967
Alignment:
Q  229 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| |||||||    
T  26892 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatg 26967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 22578 - 22650
Alignment:
Q  2 aatgagatggacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    ||||||||  |||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  22578 aatgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaac 22650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 26833 - 26905
Alignment:
Q  2 aatgagatggacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    ||||||||  |||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  26833 aatgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaac 26905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 229 - 304
Target Start/End: Complemental strand, 1748 - 1673
Alignment:
Q  229 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttctcatttctacatatttaaacatg 304  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| |||||||    
T  1748 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatg 1673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 1807 - 1735
Alignment:
Q  2 aatgagatggacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    ||||||||  |||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  1807 aatgagatcaacatcatcaatcaactacaatcataacatataatcataccctccatcataattcaacaacaac 1735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 100 - 304
Target Start/End: Original strand, 42965 - 43170
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||| ||| | ||||||||||| |||||||||  |||| ||| | || |||  |    
T  42965 tttcaccaaaacaccaaca-caatttaaattctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca 43063  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 297  Q
     ||||||| ||| ||| |||||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| ||||||||||  ||||| |||||||||    
T  43064 taacatcacttgaacacgaatcacatctcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttaacatttttacatattt 43163  T
Q  298 aaacatg 304  Q
     ||||||    
T  43164 gaacatg 43170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 90 - 304
Target Start/End: Original strand, 271983 - 272197
Alignment:
Q  90 aattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatcta 189  Q
    ||||||| |||||||| ||| ||||||||||||| ||  |||||   | |||| |||||| ||| |||||||||||||||||||||||| | |||||| |    
T  271983 aattcactaatttcacaaaaccaccaacaacaatccat-ttctctataacaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaa 272081  T
Q  190 ttagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttc 288  Q
    ||| || | | |||| |||||| |||||||||||| |||||| |||| ||||| | |  ||||||| | |||| |||||||||||| ||||| ||||||     
T  272082 ttaacagctataacaccaattgaacaagaatcataactcaatccaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttg 272181  T
Q  289 tacatatttaaacatg 304  Q
    | | ||||| ||||||    
T  272182 ttcctatttgaacatg 272197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 56; Significance: 3e-23; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 90 - 304
Target Start/End: Original strand, 171863 - 172077
Alignment:
Q  90 aattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatcta 189  Q
    ||||||| |||||||| ||| ||||||||||||| ||  |||| | || |||  |||||| ||| ||||| |||||||||||||||||| | |||||| |    
T  171863 aattcaccaatttcacaaaaccaccaacaacaatccat-ttcttaacaacaaatcatgaatatgcatacctaagcaatgattcatcaaccacaacatcaa 171961  T
Q  190 ttagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttc 288  Q
    ||| || | | ||||||||||| ||||||||| || ||||||||||| ||||| | |  ||||||| | |||| |||||||||||| ||||| ||||||     
T  171962 ttaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttg 172061  T
Q  289 tacatatttaaacatg 304  Q
    | | ||||| ||||||    
T  172062 ttcctatttgaacatg 172077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 90 - 304
Target Start/End: Original strand, 177566 - 177780
Alignment:
Q  90 aattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatcta 189  Q
    ||||||| |||||||| ||| ||||||||||||| ||  |||| | || |||  |||||| ||| ||||| |||||||||||||||||| | |||||| |    
T  177566 aattcaccaatttcacaaaaccaccaacaacaatccat-ttcttaacaacaaatcatgaatatgcatacctaagcaatgattcatcaaccacaacatcaa 177664  T
Q  190 ttagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttc 288  Q
    ||| || | | ||||||||||| ||||||||| || ||||||||||| ||||| | |  ||||||| | |||| |||||||||||| ||||| ||||||     
T  177665 ttaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttg 177764  T
Q  289 tacatatttaaacatg 304  Q
    | | ||||| ||||||    
T  177765 ttcctatttgaacatg 177780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 121
Target Start/End: Complemental strand, 70914 - 70882
Alignment:
Q  89 caattcacaaatttcaccaaaacaccaacaaca 121  Q
    |||||||||||||||||||||||||||||||||    
T  70914 caattcacaaatttcaccaaaacaccaacaaca 70882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 171794 - 171855
Alignment:
Q  13 catcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    |||||||||| |||||||| || ||| ||| ||||| || ||||||||| ||||||||||||    
T  171794 catcaacaattaaccacaaccacaacttatgatcatgcattccatcatatttcaacaacaac 171855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 177497 - 177558
Alignment:
Q  13 catcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    |||||||||| |||||||| || ||| ||| ||||| || ||||||||| ||||||||||||    
T  177497 catcaacaattaaccacaaccacaacttatgatcatgcattccatcatatttcaacaacaac 177558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1560 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold1560
Description:

Target: scaffold1560; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 100 - 222
Target Start/End: Complemental strand, 147 - 26
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||| ||| | ||||||||||| |||||||||  |||||||| |||| |||  |    
T  147 tttcaccaaaacaccaa-aacaattcaaattttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattca 49  T
Q  200 caacatcaattgcacaagaatca 222  Q
     || |||| ||| ||||||||||    
T  48 taatatcatttgaacaagaatca 26  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 100 - 222
Target Start/End: Original strand, 3690 - 3811
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||| ||||| ||||||||||| |||||||||||||||||| ||| | ||||||| ||| |||||||||  |||||||| |||| |||  |    
T  3690 tttcaccaaaacatcaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaagtaattattcatcaatcataacatcaattaacattca 3788  T
Q  200 caacatcaattgcacaagaatca 222  Q
     ||||||||||| ||||||||||    
T  3789 taacatcaattgaacaagaatca 3811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 304
Target Start/End: Complemental strand, 14344 - 14140
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| | || |||||||| |||||||||  |||||||| |  | |||  |    
T  14344 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaactcaagcaattattcatcaatcataacatcaaacaacattca 14246  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
     ||||| ||||| |||||||||  | ||||| | | | ||||| | |  ||||||| | |||  ||||||| |||||||||| |||||| |||||||||     
T  14245 taacattaattgaacaagaatccaatctcaaattatcaacaacttaggaaaattcaccaattgagcacaatcttcataacttatcatttttacatatttc 14146  T
Q  299 aacatg 304  Q
    ||||||    
T  14145 aacatg 14140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 304
Target Start/End: Complemental strand, 21399 - 21195
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| || |||||||| ||||||| |||||||||| ||| | || |||||||| |||||||||  |||||||| | || |||  |    
T  21399 tttcaccaaaacaccaaca-cagttcaaattttcatcattaatccatgaatatgcaaactcaagcaattattcatcaatcataacatcaaataacattca 21301  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattttgcacaattttcataacttctcatttctacatattta 298  Q
     ||||||||||| |||||||||  | ||||| | ||| ||||| | |  ||||||| | |||  || |||| |||||||||| |||||| |||||||||     
T  21300 taacatcaattgaacaagaatccaatctcaaattaacaacaacttaggaaaattcaccaattgagctcaatcttcataacttatcatttttacatatttg 21201  T
Q  299 aacatg 304  Q
    ||||||    
T  21200 aacatg 21195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 100 - 304
Target Start/End: Original strand, 3 - 208
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaa 199  Q
    ||||||||||||||||||| ||| |||||||||||||| |||| |||||| ||| | ||||||||||| |||||| ||  |||| ||| | || |||  |    
T  3 tttcaccaaaacaccaaca-caactcaaattctcatcaacaattcatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattca 101  T
Q  200 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattttgcacaattttcataacttctcatttctacatattt 297  Q
     ||||||| ||| ||||| |||| | ||||| | ||| |||||  | |  ||||||| | |||  ||||||| | |||||||| |||||| |||||||||    
T  102 taacatcatttgaacaagcatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatatacataacttatcatttttacatattt 201  T
Q  298 aaacatg 304  Q
    |||||||    
T  202 aaacatg 208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1404 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold1404
Description:

Target: scaffold1404; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 1815 - 1863
Alignment:
Q  100 tttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaa 149  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1815 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaa 1863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 108 - 177
Target Start/End: Original strand, 3183 - 3252
Alignment:
Q  108 aaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaa 177  Q
    |||||||||||||||||| ||||||| |||||||| |||||| |||  ||||||| ||||||||||||||    
T  3183 aaacaccaacaacaattccaattctcttcatcaattcatgaatatgcctacccaaacaatgattcatcaa 3252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 244
Target Start/End: Complemental strand, 77139 - 76984
Alignment:
Q  89 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaac-atgtatacccaagcaatgattcatcaactataacatc 187  Q
    |||||||| |||||||| ||| |||||||||||| |||  ||||||||| |||  ||||||  ||| |||||||||| |||| |||||||  | || |||    
T  77139 caattcaccaatttcacaaaaccaccaacaacaactcat-ttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaataacaatatc 77041  T
Q  188 tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 244  Q
      |||||| ||||||||||||||| ||| |||||  | | ||||||||| |||||||    
T  77040 acttagcaacaacaacatcaattgaacatgaatctcaccacaattcaacaacaacat 76984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 132542 - 132420
Alignment:
Q  89 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaa-catgtatacccaagcaatgattcatcaactataacatc 187  Q
    ||||||||||||||||||||||||||||||||| ||| | |||||| || ||| ||||||| |||| | |||||||| |||| | |||| | | |||||     
T  132542 caattcacaaatttcaccaaaacaccaacaacatttc-atttctcaacaacaaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatg 132444  T
Q  188 tattagcatcaacaacatcaattg 211  Q
      ||| || |||||||||||||||    
T  132443 acttaacaacaacaacatcaattg 132420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 1089 - 1028
Alignment:
Q  13 catcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    |||||||||| |||||||| || ||| ||||||||| || ||||||||| ||||||||||||    
T  1089 catcaacaattaaccacaaccacaacttataatcatgcattccatcatatttcaacaacaac 1028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 45876 - 45815
Alignment:
Q  13 catcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    |||||||||| |||||||| || ||| ||||||||| || ||||||||| ||||||||||||    
T  45876 catcaacaattaaccacaaccacaacttataatcatgcattccatcatatttcaacaacaac 45815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 250
Target Start/End: Original strand, 54412 - 54533
Alignment:
Q  129 ttctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctc 228  Q
    |||||||||||||||||| || ||||||||||||   |||||||| | || | ||||||  |||  | ||||||||||||| | ||| |||||| | |||    
T  54412 ttctcatcatcaatccataaatatgtatacccaactcatgattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctc 54511  T
Q  229 aattcaactacaacatgtcaaa 250  Q
    | |||||| ||||||| |||||    
T  54512 atttcaacaacaacatatcaaa 54533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 173
Target Start/End: Original strand, 45007 - 45051
Alignment:
Q  129 ttctcatcatcaatccatgaacatgtatacccaagcaatgattca 173  Q
    |||||||||||||||||| || |||||||||||||  ||||||||    
T  45007 ttctcatcatcaatccataaatatgtatacccaagtcatgattca 45051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 79533 - 79616
Alignment:
Q  129 ttctcatcatcaatccatgaac-atgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattg 211  Q
    ||||||||| |||| ||||||  ||| |||||||||| |||| |||||||| |||| |||  |||||| |||||||||||||||    
T  79533 ttctcatcaccaattcatgaattatgaatacccaagccatgaatcatcaacaataatatcacttagcaacaacaacatcaattg 79616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1734 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1734
Description:

Target: scaffold1734; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 1286 - 1347
Alignment:
Q  13 catcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    |||||||||| |||||||| || ||| ||| ||||| || ||||||||| ||||||||||||    
T  1286 catcaacaattaaccacaaccacaacttatgatcatgcattccatcatatttcaacaacaac 1347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 12068 - 12007
Alignment:
Q  13 catcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    |||||||||| || ||||| || ||| ||||||||| || ||||||||| ||||||||||||    
T  12068 catcaacaattaaacacaaccacaacttataatcatgcattccatcatatttcaacaacaac 12007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 118
Target Start/End: Original strand, 7522 - 7551
Alignment:
Q  89 caattcacaaatttcaccaaaacaccaaca 118  Q
    ||||||||||||||||||||||||||||||    
T  7522 caattcacaaatttcaccaaaacaccaaca 7551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 3406 - 3467
Alignment:
Q  13 catcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    |||||||||| |||||||| || ||| ||| ||||| || ||||||||| ||||||||||||    
T  3406 catcaacaattaaccacaaccacaacttatgatcatgcattccatcatatttcaacaacaac 3467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 24557 - 24496
Alignment:
Q  13 catcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaac 74  Q
    |||||||||| |||||||| || ||| ||| ||||| || ||||||||| ||||||||||||    
T  24557 catcaacaattaaccacaaccacaacttatgatcatgcattccatcatatttcaacaacaac 24496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 118
Target Start/End: Original strand, 38253 - 38282
Alignment:
Q  89 caattcacaaatttcaccaaaacaccaaca 118  Q
    ||||||||||||||||||||||||||||||    
T  38253 caattcacaaatttcaccaaaacaccaaca 38282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 2476 - 2532
Alignment:
Q  155 atacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattg 211  Q
    |||||||||| |||| |||||||| | ||||||  |||||| |||||||||||||||    
T  2476 atacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattg 2532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 1705 - 1629
Alignment:
Q  17 aacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaatt 93  Q
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T  1705 aacaattaatcacaaccacaacttataatcatgcattccatcatatttcaacaacaacatgtcataattcatcaatt 1629  T

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