View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10661_low_21 (Length: 295)
Name: NF10661_low_21
Description: NF10661
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10661_low_21 |
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Alignment Details
Target: chr1 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 1 - 279
Target Start/End: Complemental strand, 3915433 - 3915155
Alignment:
| Q |
1 |
aaagattccaagaaataataactaagcaaataactcacagcttcagaagatgttccaagtcaccaagggaagaaggaattggtccagatattttgttgtt |
100 |
Q |
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| T |
3915433 |
aaagattccaagaaataataactaagcaaataactcacagcttcagaagatgttccaagtcaccaagggaagaaggaattggtccagatattttgttgtt |
3915334 |
T |
|
| Q |
101 |
tgaaatatccctggaagaaataatctattaatataaaatcaaagatatgagcttaaggagataaactacaaaataattcatacttacaatgtatccaaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3915333 |
tgaaatatccctggaagaaataatctattaatataaaatcaaagatatgagcttaaggagataaactacaaaataattcatacttacaatgtatccaaat |
3915234 |
T |
|
| Q |
201 |
taccaatccgtgacaattcaattggaatgggaccctgaaggttgtttgacgaaagattcctacagaagaccaacaaaac |
279 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3915233 |
taccaatccgtgacaattcaattggaatgggaccctgaaggttgtttgacgaaagattcctacagaagaccaacaaaac |
3915155 |
T |
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