View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10662_low_11 (Length: 261)
Name: NF10662_low_11
Description: NF10662
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10662_low_11 |
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Alignment Details
Target: chr5 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 11 - 245
Target Start/End: Complemental strand, 5884328 - 5884094
Alignment:
| Q |
11 |
cataggtctaagttccacttcggtgaaaccattgtatgatttttgtgctagcttttgtattagtctcgtaatctcatctcttcttatttccaagaaggaa |
110 |
Q |
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| T |
5884328 |
cataggtctaagttccacttcggtgaaaccattgtatgatttttgtgctagcttttgtattagtctcataatctcatctcttcgtatttccaagaaggaa |
5884229 |
T |
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| Q |
111 |
tttaaacgatgagatgagagtatttcaattgataatattcgtcgaagattgcgccaatggtcaccataaggtgattgtgctaccgtagtattgttgtagc |
210 |
Q |
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| T |
5884228 |
tttaaacgatgagatgagagtatttcaattgataatattcgtcgaagattgcgccaatggtcaccataaggtgattgtgctaccgtagtattgttgtagc |
5884129 |
T |
|
| Q |
211 |
caatatattttccagttaagaaatgaggtcggttc |
245 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
5884128 |
caatatattttccagttaagaaatgaggtcggttc |
5884094 |
T |
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