View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10662_low_13 (Length: 250)

Name: NF10662_low_13
Description: NF10662
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10662_low_13
NF10662_low_13
[»] chr3 (12 HSPs)
chr3 (14-218)||(36626170-36626366)
chr3 (69-119)||(3457263-3457314)
chr3 (79-114)||(1618560-1618595)
chr3 (69-119)||(3961519-3961570)
chr3 (77-131)||(20200783-20200838)
chr3 (77-131)||(20202965-20203020)
chr3 (72-130)||(25631356-25631415)
chr3 (69-131)||(50520109-50520172)
chr3 (72-113)||(35864833-35864875)
chr3 (69-149)||(29250583-29250664)
chr3 (72-112)||(40487504-40487545)
chr3 (72-132)||(50194183-50194244)
[»] chr5 (11 HSPs)
chr5 (69-132)||(11976783-11976847)
chr5 (72-124)||(28235777-28235830)
chr5 (69-132)||(13422109-13422173)
chr5 (69-131)||(8811877-8811940)
chr5 (72-130)||(43148917-43148976)
chr5 (23-119)||(6830479-6830576)
chr5 (72-132)||(20257524-20257585)
chr5 (72-112)||(31391621-31391662)
chr5 (69-124)||(2415728-2415784)
chr5 (69-132)||(8096346-8096410)
chr5 (69-124)||(9425321-9425377)
[»] chr8 (10 HSPs)
chr8 (72-118)||(43135421-43135468)
chr8 (69-131)||(17019426-17019489)
chr8 (69-131)||(17549863-17549926)
chr8 (69-124)||(12243948-12244004)
chr8 (69-119)||(1215078-1215129)
chr8 (72-118)||(2656065-2656112)
chr8 (69-119)||(13575946-13575997)
chr8 (73-118)||(24842807-24842852)
chr8 (69-132)||(18994208-18994272)
chr8 (69-112)||(45445677-45445721)
[»] chr2 (10 HSPs)
chr2 (73-130)||(6174009-6174067)
chr2 (77-132)||(11985082-11985138)
chr2 (77-124)||(27477345-27477393)
chr2 (72-130)||(4228315-4228374)
chr2 (72-130)||(30420861-30420920)
chr2 (72-132)||(8806058-8806119)
chr2 (71-119)||(16570680-16570729)
chr2 (72-132)||(17994575-17994636)
chr2 (69-124)||(1930272-1930328)
chr2 (72-132)||(2808301-2808361)
[»] chr1 (12 HSPs)
chr1 (72-129)||(48217629-48217687)
chr1 (72-113)||(5324406-5324447)
chr1 (72-132)||(50148562-50148623)
chr1 (69-124)||(15312351-15312407)
chr1 (69-119)||(13969377-13969428)
chr1 (69-119)||(13999283-13999334)
chr1 (72-118)||(27872929-27872976)
chr1 (69-119)||(29726326-29726377)
chr1 (69-119)||(42491213-42491264)
chr1 (72-114)||(51868491-51868534)
chr1 (80-132)||(51916523-51916576)
chr1 (69-112)||(13144680-13144724)
[»] scaffold0022 (1 HSPs)
scaffold0022 (72-132)||(83264-83325)
[»] chr4 (8 HSPs)
chr4 (39-132)||(12199542-12199637)
chr4 (72-132)||(43853643-43853704)
chr4 (69-131)||(26674704-26674767)
chr4 (72-114)||(44947612-44947655)
chr4 (69-114)||(11299876-11299922)
chr4 (72-132)||(4644058-4644119)
chr4 (72-112)||(53811228-53811268)
chr4 (69-112)||(56172154-56172198)
[»] scaffold0150 (1 HSPs)
scaffold0150 (69-120)||(10065-10117)
[»] chr7 (9 HSPs)
chr7 (69-143)||(5238275-5238350)
chr7 (72-118)||(7640617-7640664)
chr7 (72-114)||(32521775-32521818)
chr7 (69-113)||(47156711-47156756)
chr7 (77-132)||(19404605-19404661)
chr7 (77-132)||(20083531-20083587)
chr7 (69-124)||(35141395-35141451)
chr7 (69-124)||(36350493-36350549)
chr7 (69-124)||(37714805-37714861)
[»] chr6 (3 HSPs)
chr6 (72-130)||(8196237-8196296)
chr6 (72-118)||(17334941-17334988)
chr6 (49-114)||(30608381-30608449)


Alignment Details
Target: chr3 (Bit Score: 103; Significance: 2e-51; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 14 - 218
Target Start/End: Original strand, 36626170 - 36626366
Alignment:
Q  14 aggcataggtattctgatcactttaaatttgtcacattatgtgtaggtattttacttttatgttattaacttggatgttgtgagttgttcgcaaattcat 113  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    ||||    ||||| |||||||||| ||||||||||||    
T  36626170 aggcataggtattccgatcactttaaatttgtcacattatgtgtaggtatttttctttt----tatt----tggatattgtgagttgatcgcaaattcat 36626261  T
Q  114 cattttcatttgtagcgatatagaatttgtgtttgtgtctgatatacttc-aagnnnnnnnattactatagtattctatcaatatgaatgaatgattata 212  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| | ||        |||||||||||| || |||||||||||||||||||||||    
T  36626262 cattttcatttgtagtgatatagaatttgtgtttgtgtctgatatactccaaaatttttttattactatagtactc-atcaatatgaatgaatgattata 36626360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 119
Target Start/End: Original strand, 3457263 - 3457314
Alignment:
Q  69 ttttatgttattaacttggatgttgtgag-ttgttcgcaaattcatcatttt 119  Q
    ||||||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  3457263 ttttatgctattaacatggatgttgtgagtttgttcgcaaattcatcatttt 3457314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 114
Target Start/End: Complemental strand, 1618595 - 1618560
Alignment:
Q  79 ttaacttggatgttgtgagttgttcgcaaattcatc 114  Q
    ||||| ||||||||||||||||||||||||||||||    
T  1618595 ttaacctggatgttgtgagttgttcgcaaattcatc 1618560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 119
Target Start/End: Complemental strand, 3961570 - 3961519
Alignment:
Q  69 ttttatgttattaacttggatgttgtgag-ttgttcgcaaattcatcatttt 119  Q
    ||||||||||||||  ||||||||||||| ||||| ||||||||||||||||    
T  3961570 ttttatgttattaatatggatgttgtgagtttgtttgcaaattcatcatttt 3961519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 20200838 - 20200783
Alignment:
Q  77 tattaacttggatgttgtgagt-tgttcgcaaattcatcattttcatttgtagcga 131  Q
    ||||||| |||||||||||||| |||||||| ||||||| ||||||||| ||||||    
T  20200838 tattaacatggatgttgtgagtctgttcgcatattcatccttttcatttttagcga 20200783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 20203020 - 20202965
Alignment:
Q  77 tattaacttggatgttgtgagt-tgttcgcaaattcatcattttcatttgtagcga 131  Q
    ||||||| |||||||||||||| |||||||| ||||||| ||||||||| ||||||    
T  20203020 tattaacatggatgttgtgagtctgttcgcatattcatccttttcatttttagcga 20202965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 130
Target Start/End: Complemental strand, 25631415 - 25631356
Alignment:
Q  72 tatgttattaacttggatgttgtgag-ttgttcgcaaattcatcattttcatttgtagcg 130  Q
    ||||||||||||||||||| |||||| ||||||||| ||||||| ||| ||||| |||||    
T  25631415 tatgttattaacttggatgatgtgagtttgttcgcagattcatcctttacatttttagcg 25631356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 50520109 - 50520172
Alignment:
Q  69 ttttatgttattaacttggatgttgtgagt-tgttcgcaaattcatcattttcatttgtagcga 131  Q
    ||||||| ||||||| |||||||||||||| ||||| || |||||||||||| |||| ||||||    
T  50520109 ttttatgctattaacatggatgttgtgagtctgttcacagattcatcatttttatttttagcga 50520172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 113
Target Start/End: Complemental strand, 35864875 - 35864833
Alignment:
Q  72 tatgttattaacttggatgttgtga-gttgttcgcaaattcat 113  Q
    |||| |||||||||||||||||||| |||||||||||||||||    
T  35864875 tatgctattaacttggatgttgtgaggttgttcgcaaattcat 35864833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 29250664 - 29250583
Alignment:
Q  69 ttttatgttattaacttggatgttgtgagtt-gttcgcaaattcatcattttcatttgtagcgatatagaatttgtgtttgt 149  Q
    |||||| || ||| |||||||| || ||||| ||||| | ||||||||||||| ||| ||||||| | ||||||||||||||    
T  29250664 ttttattttgttatcttggatgatgagagtttgttcgtagattcatcattttcctttttagcgatgttgaatttgtgtttgt 29250583  T

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Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 112
Target Start/End: Original strand, 40487504 - 40487545
Alignment:
Q  72 tatgttattaacttggatgttgtgag-ttgttcgcaaattca 112  Q
    |||||||||||||||| ||||||||| |||||||||||||||    
T  40487504 tatgttattaacttgggtgttgtgagtttgttcgcaaattca 40487545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 132
Target Start/End: Complemental strand, 50194244 - 50194183
Alignment:
Q  72 tatgttattaacttggatgttgtgag-ttgttcgcaaattcatcattttcatttgtagcgat 132  Q
    |||| ||||||||||||||||||||| ||||||||| ||||||| ||| | ||| |||||||    
T  50194244 tatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacgtttttagcgat 50194183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 11976847 - 11976783
Alignment:
Q  69 ttttatgttattaacttggatgttgtgag-ttgttcgcaaattcatcattttcatttgtagcgat 132  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||| ||| ||||| |||||||    
T  11976847 ttttatgttattaacttggatgttgtgagtttgttcgcagattcatcctttacatttttagcgat 11976783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 28235777 - 28235830
Alignment:
Q  72 tatgttattaacttggatgttgtgag-ttgttcgcaaattcatcattttcattt 124  Q
    |||| ||||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  28235777 tatgctattaacttggatgttgtgagtttgttcgcagattcatcatttacattt 28235830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 13422109 - 13422173
Alignment:
Q  69 ttttatgttattaacttggatgttgtgag-ttgttcgcaaattcatcattttcatttgtagcgat 132  Q
    ||||||| ||||||||||||||||||||| ||||||||| ||||||| ||| | ||| |||||||    
T  13422109 ttttatgctattaacttggatgttgtgagtttgttcgcatattcatcctttacgtttttagcgat 13422173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 8811940 - 8811877
Alignment:
Q  69 ttttatgttattaacttggatgttgtgagtt-gttcgcaaattcatcattttcatttgtagcga 131  Q
    ||||||| ||||||| |||||| |||||||| |||| |||||||||||||||| ||| ||||||    
T  8811940 ttttatgctattaacatggatgatgtgagtttgttcacaaattcatcattttcgtttttagcga 8811877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 130
Target Start/End: Original strand, 43148917 - 43148976
Alignment:
Q  72 tatgttattaacttggatgttgtgag-ttgttcgcaaattcatcattttcatttgtagcg 130  Q
    |||| ||||||||||||||||||||| ||||||||| ||||||| ||| ||||| |||||    
T  43148917 tatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacatttttagcg 43148976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 119
Target Start/End: Complemental strand, 6830576 - 6830479
Alignment:
Q  23 tattctgatcactttaaatttgtcacattatgtgtaggtattttacttttatgttattaacttggatgttgtgag-ttgttcgcaaattcatcatttt 119  Q
    ||||||||||| ||||| |||||||||||||| ||||  ||||    |||||| |||| ||| |||| || |||| |||||| |||||||||||||||    
T  6830576 tattctgatcattttaattttgtcacattatgggtagacatttattgtttatgctatttactgggattttatgagtttgttctcaaattcatcatttt 6830479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 132
Target Start/End: Complemental strand, 20257585 - 20257524
Alignment:
Q  72 tatgttattaacttggatgttgtgag-ttgttcgcaaattcatcattttcatttgtagcgat 132  Q
    ||||||||||||||||||| |||||| |||||| || ||||||||||| | ||| |||||||    
T  20257585 tatgttattaacttggatgatgtgagtttgttcacagattcatcatttacgtttttagcgat 20257524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 112
Target Start/End: Complemental strand, 31391662 - 31391621
Alignment:
Q  72 tatgttattaacttggatgttgtgag-ttgttcgcaaattca 112  Q
    |||| ||||||||||||||||||||| |||||||||||||||    
T  31391662 tatgctattaacttggatgttgtgagtttgttcgcaaattca 31391621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 124
Target Start/End: Original strand, 2415728 - 2415784
Alignment:
Q  69 ttttatgttattaacttggatgttgtgagt-tgttcgcaaattcatcattttcattt 124  Q
    ||||||| ||||||| |||||||||||||| ||||| |||||||||| |||| ||||    
T  2415728 ttttatgctattaacatggatgttgtgagtctgttcacaaattcatcctttttattt 2415784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 8096410 - 8096346
Alignment:
Q  69 ttttatgttattaacttggatgttgtgagtt-gttcgcaaattcatcattttcatttgtagcgat 132  Q
    ||||||| ||||||||||| || |||||||| ||||||||||||| | ||| ||||| |||||||    
T  8096410 ttttatgctattaacttgggtggtgtgagtttgttcgcaaattcaccctttacatttttagcgat 8096346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 9425377 - 9425321
Alignment:
Q  69 ttttatgttattaacttggatgttgtgag-ttgttcgcaaattcatcattttcattt 124  Q
    |||||||||||||||||||||| |||||| ||||||||| |||| || |||| ||||    
T  9425377 ttttatgttattaacttggatgatgtgagtttgttcgcatattcgtcctttttattt 9425321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 118
Target Start/End: Complemental strand, 43135468 - 43135421
Alignment:
Q  72 tatgttattaacttggatgttgtgagt-tgttcgcaaattcatcattt 118  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  43135468 tatgttattaacttggatgttgtgagtatgttcgcaaattcatcattt 43135421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 17019426 - 17019489
Alignment:
Q  69 ttttatgttattaacttggatgttgtgag-ttgttcgcaaattcatcattttcatttgtagcga 131  Q
    ||||||| ||||||| ||||||||||||| ||||||||||||||||| ||||| ||| ||||||    
T  17019426 ttttatgctattaacatggatgttgtgagtttgttcgcaaattcatccttttcgtttttagcga 17019489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 17549863 - 17549926
Alignment:
Q  69 ttttatgttattaacttggatgttgtgag-ttgttcgcaaattcatcattttcatttgtagcga 131  Q
    ||||||| ||||||| ||||||||||||| ||||||||||||||||| ||||| ||| ||||||    
T  17549863 ttttatgctattaacatggatgttgtgagtttgttcgcaaattcatccttttcgtttttagcga 17549926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 12244004 - 12243948
Alignment:
Q  69 ttttatgttattaacttggatgttgtgag-ttgttcgcaaattcatcattttcattt 124  Q
    ||||||||||||||| ||||||||||||| ||||||||| ||||||| |||| ||||    
T  12244004 ttttatgttattaacatggatgttgtgagtttgttcgcagattcatcctttttattt 12243948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 119
Target Start/End: Complemental strand, 1215129 - 1215078
Alignment:
Q  69 ttttatgttattaacttggatgttgtgag-ttgttcgcaaattcatcatttt 119  Q
    ||||||||||||||| | ||||||||||| |||||| |||||||||||||||    
T  1215129 ttttatgttattaacattgatgttgtgagtttgttcacaaattcatcatttt 1215078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 118
Target Start/End: Original strand, 2656065 - 2656112
Alignment:
Q  72 tatgttattaacttggatgttgtgagtt-gttcgcaaattcatcattt 118  Q
    |||| |||||||||||||| |||||||| |||||||||||||||||||    
T  2656065 tatgctattaacttggatgctgtgagtttgttcgcaaattcatcattt 2656112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 119
Target Start/End: Complemental strand, 13575997 - 13575946
Alignment:
Q  69 ttttatgttattaacttggatgttgtgag-ttgttcgcaaattcatcatttt 119  Q
    ||||||| ||||||| ||||||||||||| ||||||||||||||||| ||||    
T  13575997 ttttatgctattaacatggatgttgtgagtttgttcgcaaattcatcctttt 13575946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 24842852 - 24842807
Alignment:
Q  73 atgttattaacttggatgttgtgagttgttcgcaaattcatcattt 118  Q
    ||||||||||||||||   ||||||||||||||| |||||||||||    
T  24842852 atgttattaacttggaaactgtgagttgttcgcatattcatcattt 24842807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 18994208 - 18994272
Alignment:
Q  69 ttttatgttattaacttggatgttgtga-gttgttcgcaaattcatcattttcatttgtagcgat 132  Q
    ||||||| ||||||| ||||||||||||  ||||||||| ||||||| |||| |||| |||||||    
T  18994208 ttttatgctattaacatggatgttgtgattttgttcgcagattcatcctttttatttttagcgat 18994272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 112
Target Start/End: Complemental strand, 45445721 - 45445677
Alignment:
Q  69 ttttatgttattaacttggatgttgtgag-ttgttcgcaaattca 112  Q
    ||||||| ||||||||||||||||||||| ||||||||| |||||    
T  45445721 ttttatgctattaacttggatgttgtgagtttgttcgcatattca 45445677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.00000000009; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 73 - 130
Target Start/End: Original strand, 6174009 - 6174067
Alignment:
Q  73 atgttattaacttggatgttgtgag-ttgttcgcaaattcatcattttcatttgtagcg 130  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| ||| ||||| |||||    
T  6174009 atgttattaacttggatgttgtgagtttgttcgcagattcatcctttacatttttagcg 6174067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 11985138 - 11985082
Alignment:
Q  77 tattaacttggatgttgtgagtt-gttcgcaaattcatcattttcatttgtagcgat 132  Q
    |||||||||||||||||||| || ||||||||||||||||||| | ||| |||||||    
T  11985138 tattaacttggatgttgtgaatttgttcgcaaattcatcatttacgtttttagcgat 11985082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 124
Target Start/End: Original strand, 27477345 - 27477393
Alignment:
Q  77 tattaacttggatgttgtgagt-tgttcgcaaattcatcattttcattt 124  Q
    |||||||||||||||||||||| |||||||| ||||||||||| |||||    
T  27477345 tattaacttggatgttgtgagtatgttcgcagattcatcatttacattt 27477393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 130
Target Start/End: Original strand, 4228315 - 4228374
Alignment:
Q  72 tatgttattaacttggatgttgtgag-ttgttcgcaaattcatcattttcatttgtagcg 130  Q
    |||| ||||||||||||||||||||| ||||||||| ||||||| ||| ||||| |||||    
T  4228315 tatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacatttttagcg 4228374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 130
Target Start/End: Original strand, 30420861 - 30420920
Alignment:
Q  72 tatgttattaacttggatgttgtgag-ttgttcgcaaattcatcattttcatttgtagcg 130  Q
    |||| ||||||||||||||||||||| ||||||||| ||||||| ||| ||||| |||||    
T  30420861 tatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacatttttagcg 30420920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 8806058 - 8806119
Alignment:
Q  72 tatgttattaacttggatgttgtgag-ttgttcgcaaattcatcattttcatttgtagcgat 132  Q
    |||| ||||||||||||||||||||| ||||||||| ||||||| ||| | ||| |||||||    
T  8806058 tatgctattaacttggatgttgtgagattgttcgcagattcatcctttacgtttttagcgat 8806119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 16570680 - 16570729
Alignment:
Q  71 ttatgttattaacttggatgttgtgagtt-gttcgcaaattcatcatttt 119  Q
    |||| |||||||| | ||||||||||||| ||||||||||||||||||||    
T  16570680 ttatattattaacatagatgttgtgagtttgttcgcaaattcatcatttt 16570729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 132
Target Start/End: Complemental strand, 17994636 - 17994575
Alignment:
Q  72 tatgttattaacttggatgttgtgag-ttgttcgcaaattcatcattttcatttgtagcgat 132  Q
    |||| ||||||||||||||||||||| ||||||||| |||||||  || | |||||||||||    
T  17994636 tatgctattaacttggatgttgtgagtttgttcgcatattcatccgttacgtttgtagcgat 17994575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 1930328 - 1930272
Alignment:
Q  69 ttttatgttattaacttggatgttgtgagtt-gttcgcaaattcatcattttcattt 124  Q
    ||||||| |||||| ||| ||||||||| || ||||||||||||| |||||||||||    
T  1930328 ttttatgctattaatttgaatgttgtgattttgttcgcaaattcaacattttcattt 1930272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 132
Target Start/End: Complemental strand, 2808361 - 2808301
Alignment:
Q  72 tatgttattaacttggatgttgtgagttgttcgcaaattcatcattttcatttgtagcgat 132  Q
    |||| |||||||||||||| |||||||||||| || ||||||| ||| | ||| |||||||    
T  2808361 tatgctattaacttggatgatgtgagttgttcacagattcatcctttacgtttttagcgat 2808301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.00000000009; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 129
Target Start/End: Original strand, 48217629 - 48217687
Alignment:
Q  72 tatgttattaacttggatgttgtgag-ttgttcgcaaattcatcattttcatttgtagc 129  Q
    |||| ||||||||||||||||||||| ||||||||||||||||| ||| ||||| ||||    
T  48217629 tatgctattaacttggatgttgtgagtttgttcgcaaattcatcctttacatttttagc 48217687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 113
Target Start/End: Complemental strand, 5324447 - 5324406
Alignment:
Q  72 tatgttattaacttggatgttgtgagttgttcgcaaattcat 113  Q
    |||| |||||||||||||||||||||||||||||| ||||||    
T  5324447 tatgctattaacttggatgttgtgagttgttcgcagattcat 5324406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 50148562 - 50148623
Alignment:
Q  72 tatgttattaacttggatgttgtgagttg-ttcgcaaattcatcattttcatttgtagcgat 132  Q
    |||| |||||||||||||||||||||||| |||||| ||||||| ||| ||||| |||||||    
T  50148562 tatgctattaacttggatgttgtgagttgtttcgcagattcatcctttacatttttagcgat 50148623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 15312407 - 15312351
Alignment:
Q  69 ttttatgttattaacttggatgttgtgag-ttgttcgcaaattcatcattttcattt 124  Q
    ||||||||||||||| ||||||||||||| ||||||||| ||||||| |||| ||||    
T  15312407 ttttatgttattaacatggatgttgtgagtttgttcgcagattcatcctttttattt 15312351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 119
Target Start/End: Complemental strand, 13969428 - 13969377
Alignment:
Q  69 ttttatgttattaacttggatgttgtgag-ttgttcgcaaattcatcatttt 119  Q
    ||||||||||||||| ||||||||||||| ||||||||| ||||||| ||||    
T  13969428 ttttatgttattaacatggatgttgtgagtttgttcgcagattcatcctttt 13969377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 119
Target Start/End: Original strand, 13999283 - 13999334
Alignment:
Q  69 ttttatgttattaacttggatgttgtgag-ttgttcgcaaattcatcatttt 119  Q
    ||||||||||||||| |||| |||||||| ||||||||| ||||||||||||    
T  13999283 ttttatgttattaacatggacgttgtgagtttgttcgcagattcatcatttt 13999334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 118
Target Start/End: Original strand, 27872929 - 27872976
Alignment:
Q  72 tatgttattaacttggatgttgtgag-ttgttcgcaaattcatcattt 118  Q
    ||||||||||||||| |||||||||| ||||||||| |||||||||||    
T  27872929 tatgttattaacttgaatgttgtgagtttgttcgcagattcatcattt 27872976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 119
Target Start/End: Complemental strand, 29726377 - 29726326
Alignment:
Q  69 ttttatgttattaacttggatgttgtgag-ttgttcgcaaattcatcatttt 119  Q
    ||||||| ||||||| ||||||||||||| |||||| |||||||||||||||    
T  29726377 ttttatgctattaacatggatgttgtgagtttgttcacaaattcatcatttt 29726326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 119
Target Start/End: Original strand, 42491213 - 42491264
Alignment:
Q  69 ttttatgttattaacttggatgttgtgag-ttgttcgcaaattcatcatttt 119  Q
    ||||||||||||||| ||||||||||||| |||||| || ||||||||||||    
T  42491213 ttttatgttattaacatggatgttgtgagtttgttcacagattcatcatttt 42491264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 114
Target Start/End: Complemental strand, 51868534 - 51868491
Alignment:
Q  72 tatgttattaacttggatgttgtgag-ttgttcgcaaattcatc 114  Q
    ||||||||||||||||||| |||||| |||||||||||||||||    
T  51868534 tatgttattaacttggatgctgtgagtttgttcgcaaattcatc 51868491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 132
Target Start/End: Complemental strand, 51916576 - 51916523
Alignment:
Q  80 taacttggatgttgtgagtt-gttcgcaaattcatcattttcatttgtagcgat 132  Q
    |||||||| ||||||||||| |||| |||||||||||||| ||||| |||||||    
T  51916576 taacttgggtgttgtgagtttgttcccaaattcatcatttacatttttagcgat 51916523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 112
Target Start/End: Complemental strand, 13144724 - 13144680
Alignment:
Q  69 ttttatgttattaacttggatgttgtgag-ttgttcgcaaattca 112  Q
    ||||||| ||||||||||||||||||||| ||||||||| |||||    
T  13144724 ttttatgctattaacttggatgttgtgagtttgttcgcagattca 13144680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 132
Target Start/End: Complemental strand, 83325 - 83264
Alignment:
Q  72 tatgttattaacttggatgttgtgag-ttgttcgcaaattcatcattttcatttgtagcgat 132  Q
    |||| ||||||||||||||||||||| ||||||||| ||||||||||| | ||| |||||||    
T  83325 tatgctattaacttggatgttgtgagtttgttcgcagattcatcatttacgtttttagcgat 83264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000003; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 132
Target Start/End: Complemental strand, 12199637 - 12199542
Alignment:
Q  39 aatttgtcacattatgtgtaggtattttactttt--atgttattaacttggatgttgtgagtt-gttcgcaaattcatcattttcatttgtagcgat 132  Q
    ||||| ||| ||||| ||||||||||||||| ||  ||||||||| ||||| ||||||||||| ||||||| ||||| ||||| | |||||||||||    
T  12199637 aatttatcatattatttgtaggtattttactgttgtatgttatta-cttgggtgttgtgagtttgttcgcagattcaccatttacgtttgtagcgat 12199542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 43853643 - 43853704
Alignment:
Q  72 tatgttattaacttggatgttgtgag-ttgttcgcaaattcatcattttcatttgtagcgat 132  Q
    |||||||||||||||||||||||||| ||||||||| ||| | ||||| ||||| |||||||    
T  43853643 tatgttattaacttggatgttgtgagtttgttcgcagattaaccatttacatttttagcgat 43853704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 26674704 - 26674767
Alignment:
Q  69 ttttatgttattaacttggatgttgtgag-ttgttcgcaaattcatcattttcatttgtagcga 131  Q
    ||||||| ||||||| ||||||||||||| |||||| || |||||||||||| |||| ||||||    
T  26674704 ttttatgctattaacatggatgttgtgagtttgttcacagattcatcatttttatttttagcga 26674767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 114
Target Start/End: Original strand, 44947612 - 44947655
Alignment:
Q  72 tatgttattaacttggatgttgtgag-ttgttcgcaaattcatc 114  Q
    |||||||||||||||||||||||||| ||||||||| |||||||    
T  44947612 tatgttattaacttggatgttgtgagtttgttcgcagattcatc 44947655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 114
Target Start/End: Complemental strand, 11299922 - 11299876
Alignment:
Q  69 ttttatgttattaacttggatgttgtgag-ttgttcgcaaattcatc 114  Q
    ||||||||||||||||||| ||||||||| ||||||||| |||||||    
T  11299922 ttttatgttattaacttgggtgttgtgagtttgttcgcagattcatc 11299876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 4644058 - 4644119
Alignment:
Q  72 tatgttattaacttggatgttgtgag-ttgttcgcaaattcatcattttcatttgtagcgat 132  Q
    |||| ||||||||||||||||||||| ||||||||| ||||||| ||| | ||| |||||||    
T  4644058 tatgctattaacttggatgttgtgagcttgttcgcagattcatcctttacgtttttagcgat 4644119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 112
Target Start/End: Original strand, 53811228 - 53811268
Alignment:
Q  72 tatgttattaacttggatgttgtgagttgttcgcaaattca 112  Q
    |||| ||||||||||| |||||||||||||||||| |||||    
T  53811228 tatgctattaacttgggtgttgtgagttgttcgcagattca 53811268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 112
Target Start/End: Original strand, 56172154 - 56172198
Alignment:
Q  69 ttttatgttattaacttggatgttgtgag-ttgttcgcaaattca 112  Q
    ||||||||||||||| ||||||||||||| ||||||||| |||||    
T  56172154 ttttatgttattaacatggatgttgtgagtttgttcgcagattca 56172198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 120
Target Start/End: Complemental strand, 10117 - 10065
Alignment:
Q  69 ttttatgttattaacttggatgttgtgag-ttgttcgcaaattcatcattttc 120  Q
    ||||||| ||||||| ||||||||||||| ||||||||||||||||| |||||    
T  10117 ttttatgctattaacatggatgttgtgagtttgttcgcaaattcatccttttc 10065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 32; Significance: 0.000000005; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 5238275 - 5238350
Alignment:
Q  69 ttttatgttattaacttggatgttgtgag-ttgttcgcaaattcatcattttcatttgtagcgatatagaatttgt 143  Q
    ||||||||||||||| |||||| |||||| |||||| |||||||||| |||| |||| || |||| | ||||||||    
T  5238275 ttttatgttattaacatggatgatgtgagtttgttctcaaattcatcctttttatttttaacgattttgaatttgt 5238350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 118
Target Start/End: Complemental strand, 7640664 - 7640617
Alignment:
Q  72 tatgttattaacttggatgttgtgag-ttgttcgcaaattcatcattt 118  Q
    |||| ||||||||||||||||||||| ||||||||| |||||||||||    
T  7640664 tatgctattaacttggatgttgtgagtttgttcgcagattcatcattt 7640617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 114
Target Start/End: Complemental strand, 32521818 - 32521775
Alignment:
Q  72 tatgttattaacttggatgttgtgag-ttgttcgcaaattcatc 114  Q
    |||||||||||||||||||||||||| |||||| ||||||||||    
T  32521818 tatgttattaacttggatgttgtgagtttgttcacaaattcatc 32521775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 47156711 - 47156756
Alignment:
Q  69 ttttatgttattaacttggatgttgtgagt-tgttcgcaaattcat 113  Q
    ||||||||||||||| |||||||||||||| ||||| |||||||||    
T  47156711 ttttatgttattaacatggatgttgtgagtctgttcacaaattcat 47156756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 19404661 - 19404605
Alignment:
Q  77 tattaacttggatgttgtgag-ttgttcgcaaattcatcattttcatttgtagcgat 132  Q
    |||||||||||||| |||||| ||||||||| ||||||| ||| ||||| |||||||    
T  19404661 tattaacttggatgctgtgagtttgttcgcagattcatcctttacatttttagcgat 19404605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 20083531 - 20083587
Alignment:
Q  77 tattaacttggatgttgtgagtt-gttcgcaaattcatcattttcatttgtagcgat 132  Q
    ||||||||| |||||| | |||| ||||||| ||||||||||| |||||||||||||    
T  20083531 tattaactttgatgttattagtttgttcgcagattcatcatttacatttgtagcgat 20083587  T

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Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 35141451 - 35141395
Alignment:
Q  69 ttttatgttattaacttggatgttgtgag-ttgttcgcaaattcatcattttcattt 124  Q
    |||||| |||||||| ||||||||||||| ||||||||| ||||||| |||| ||||    
T  35141451 ttttatattattaacatggatgttgtgagtttgttcgcagattcatcctttttattt 35141395  T

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Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 124
Target Start/End: Original strand, 36350493 - 36350549
Alignment:
Q  69 ttttatgttattaacttggatgttgtga-gttgttcgcaaattcatcattttcattt 124  Q
    ||||||| ||||||| |||||||||||| ||||||| |||||||||| |||| ||||    
T  36350493 ttttatgctattaacatggatgttgtgaggttgttcacaaattcatcctttttattt 36350549  T

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Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 124
Target Start/End: Original strand, 37714805 - 37714861
Alignment:
Q  69 ttttatgttattaacttggatgttgtgag-ttgttcgcaaattcatcattttcattt 124  Q
    |||||||||||| || ||||||||||||| ||||||||| ||||||| |||| ||||    
T  37714805 ttttatgttatttacatggatgttgtgagtttgttcgcatattcatcttttttattt 37714861  T

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Target: chr6 (Bit Score: 32; Significance: 0.000000005; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 130
Target Start/End: Complemental strand, 8196296 - 8196237
Alignment:
Q  72 tatgttattaacttggatgttgtgagt-tgttcgcaaattcatcattttcatttgtagcg 130  Q
    |||| |||||||||||||| ||||||| |||||||||||||||| ||| ||||| |||||    
T  8196296 tatgctattaacttggatgctgtgagtgtgttcgcaaattcatcctttacatttttagcg 8196237  T

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Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 118
Target Start/End: Original strand, 17334941 - 17334988
Alignment:
Q  72 tatgttattaacttggatgttgtgag-ttgttcgcaaattcatcattt 118  Q
    |||| ||||||||||||||||||||| ||||||||| |||||||||||    
T  17334941 tatgctattaacttggatgttgtgagtttgttcgcagattcatcattt 17334988  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 30608449 - 30608381
Alignment:
Q  49 attatgtgtaggtattttac--ttttatgttattaacttggatgttgtgag-ttgttcgcaaattcatc 114  Q
    ||||| |||||| |||||||  || |||| ||||||||||||||||||||| ||||| |||||||||||    
T  30608449 attatttgtaggcattttaccgttgtatgctattaacttggatgttgtgagattgtttgcaaattcatc 30608381  T

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