View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10662_low_15 (Length: 241)
Name: NF10662_low_15
Description: NF10662
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10662_low_15 |
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Alignment Details
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 20 - 233
Target Start/End: Original strand, 29063247 - 29063460
Alignment:
| Q |
20 |
aacggcgagtagcttccaagacaagaactcaccacacgcgcttgtaacgcttgtgcaaaatacgcacctactcgctccggtgaagtaccgaacggtgaag |
119 |
Q |
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| T |
29063247 |
aacggcgagtagcttccaagacaagaactcaccacacgcgcttgtaacgcttgtgcaaaatacgcacctactcgctccggtgaagtaccgaacggtgaag |
29063346 |
T |
|
| Q |
120 |
agagttcagttatctccggtaaaaggtcgttggcgaagtcgaggttatccatggcaacacactcagcacattgaagcaaaagccctagaagtttgagacc |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29063347 |
agagttcagttatctccggtaaaaggtcgttggcgaagtcgaggttatccatggcaacacactcagcacattgaagcaaaagccctagaagtttgagacc |
29063446 |
T |
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| Q |
220 |
tgtagattcttctc |
233 |
Q |
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|||||||||||||| |
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| T |
29063447 |
tgtagattcttctc |
29063460 |
T |
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