View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10665_high_4 (Length: 269)
Name: NF10665_high_4
Description: NF10665
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10665_high_4 |
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Alignment Details
Target: chr5 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 19 - 259
Target Start/End: Original strand, 2272662 - 2272905
Alignment:
| Q |
19 |
aaatagcagaagaatgaataatgtttaaggacagacttaatgttcgtgtccaagacaaagtgaatatatgttgatgttcatatcagtttattaatttgaa |
118 |
Q |
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| T |
2272662 |
aaatagcagaagaatgaataatgcttaaggacagacttaatgttcgtgtccaagacaaagtgaatatatgttgatgttcatatcagtttattaatttgaa |
2272761 |
T |
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| Q |
119 |
ttgtctagcttttcaattggttctgtgtgcttcactgcaacattatttatttcctccaaatggacattg---ttttgttccatgtattgcttcccatatt |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
2272762 |
ttgtctagcttttcaattggttctgtgtgcttcactgcaacattatttatttcctccaaatggacattgtttttttgttccatgtattgcttcccatatt |
2272861 |
T |
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| Q |
216 |
ttgcttcactgtgttaattgatcaatgtggtccatgcacctatg |
259 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2272862 |
ttgcttcactgtgttaattgatcaatgtggtccatgcacctatg |
2272905 |
T |
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