View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10665_low_2 (Length: 364)

Name: NF10665_low_2
Description: NF10665
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10665_low_2
NF10665_low_2
[»] chr2 (22 HSPs)
chr2 (10-345)||(22363152-22363487)
chr2 (10-126)||(4060175-4060293)
chr2 (10-125)||(42602552-42602669)
chr2 (10-124)||(37480074-37480190)
chr2 (10-122)||(16918539-16918653)
chr2 (28-123)||(42327376-42327471)
chr2 (10-125)||(34041549-34041666)
chr2 (48-125)||(29503269-29503346)
chr2 (10-123)||(41908599-41908714)
chr2 (11-123)||(42922414-42922529)
chr2 (10-124)||(7798997-7799112)
chr2 (48-123)||(23052524-23052599)
chr2 (73-119)||(24191842-24191888)
chr2 (35-124)||(3001378-3001467)
chr2 (72-125)||(12261361-12261414)
chr2 (59-120)||(33962796-33962857)
chr2 (10-123)||(1435064-1435178)
chr2 (11-124)||(14500276-14500391)
chr2 (31-123)||(19016031-19016123)
chr2 (11-84)||(21195638-21195713)
chr2 (31-123)||(32106566-32106658)
chr2 (48-124)||(39714991-39715067)
[»] chr4 (22 HSPs)
chr4 (11-124)||(51250484-51250599)
chr4 (10-102)||(38869789-38869883)
chr4 (10-123)||(37109312-37109427)
chr4 (10-123)||(28635696-28635811)
chr4 (48-120)||(41346964-41347036)
chr4 (48-121)||(40283987-40284060)
chr4 (14-123)||(19238542-19238653)
chr4 (14-123)||(39509070-39509181)
chr4 (14-123)||(55427165-55427276)
chr4 (48-123)||(46545711-46545786)
chr4 (74-124)||(27965537-27965587)
chr4 (73-123)||(40285623-40285673)
chr4 (10-120)||(7292759-7292871)
chr4 (10-124)||(7949415-7949531)
chr4 (10-102)||(15180762-15180853)
chr4 (11-125)||(19680750-19680866)
chr4 (73-126)||(32003086-32003139)
chr4 (10-123)||(37274420-37274536)
chr4 (10-111)||(4249189-4249292)
chr4 (48-124)||(12798683-12798759)
chr4 (10-99)||(23377980-23378071)
chr4 (48-124)||(37720215-37720291)
[»] chr1 (20 HSPs)
chr1 (14-124)||(51814493-51814605)
chr1 (10-124)||(8177143-8177259)
chr1 (11-121)||(33700735-33700847)
chr1 (10-111)||(2799874-2799977)
chr1 (10-123)||(31794225-31794340)
chr1 (11-124)||(36371469-36371584)
chr1 (29-112)||(52336756-52336839)
chr1 (63-124)||(41508830-41508891)
chr1 (10-123)||(9165156-9165271)
chr1 (10-125)||(40257397-40257514)
chr1 (31-124)||(34228873-34228965)
chr1 (59-124)||(45235391-45235456)
chr1 (10-123)||(18037574-18037689)
chr1 (28-123)||(31605829-31605924)
chr1 (10-125)||(46146228-46146345)
chr1 (10-84)||(6122833-6122909)
chr1 (10-125)||(4566546-4566662)
chr1 (48-100)||(15786321-15786373)
chr1 (48-112)||(17410242-17410306)
chr1 (10-95)||(40810495-40810582)
[»] chr8 (21 HSPs)
chr8 (10-123)||(18540298-18540413)
chr8 (11-123)||(968362-968476)
chr8 (10-124)||(28783059-28783175)
chr8 (48-120)||(36205198-36205270)
chr8 (14-121)||(2203494-2203603)
chr8 (48-125)||(16852338-16852415)
chr8 (48-125)||(19703488-19703565)
chr8 (10-124)||(44780075-44780191)
chr8 (10-133)||(12988418-12988542)
chr8 (11-123)||(20994419-20994534)
chr8 (10-102)||(6536541-6536635)
chr8 (31-122)||(29858033-29858124)
chr8 (28-123)||(35287716-35287811)
chr8 (10-123)||(33017214-33017328)
chr8 (31-120)||(2792646-2792735)
chr8 (31-100)||(3305172-3305241)
chr8 (48-121)||(3624582-3624655)
chr8 (48-125)||(3826778-3826855)
chr8 (75-124)||(4830486-4830535)
chr8 (11-120)||(11492035-11492146)
chr8 (31-123)||(23361633-23361725)
[»] chr7 (21 HSPs)
chr7 (10-123)||(26459371-26459486)
chr7 (11-120)||(20952110-20952222)
chr7 (10-124)||(2446307-2446423)
chr7 (10-124)||(30579334-30579450)
chr7 (10-125)||(17040973-17041090)
chr7 (10-123)||(25590611-25590726)
chr7 (10-123)||(39631844-39631959)
chr7 (28-123)||(5273571-5273666)
chr7 (10-123)||(18363696-18363810)
chr7 (64-121)||(21854550-21854607)
chr7 (30-123)||(22760863-22760956)
chr7 (31-123)||(31835192-31835284)
chr7 (11-124)||(43215183-43215298)
chr7 (47-123)||(48771938-48772014)
chr7 (10-124)||(41487361-41487474)
chr7 (10-112)||(18847384-18847487)
chr7 (31-124)||(38374583-38374676)
chr7 (31-124)||(45709692-45709785)
chr7 (10-87)||(9183152-9183231)
chr7 (31-123)||(19553454-19553545)
chr7 (11-84)||(33181172-33181247)
[»] chr3 (26 HSPs)
chr3 (10-125)||(30232328-30232445)
chr3 (11-124)||(15048023-15048138)
chr3 (31-125)||(8051212-8051306)
chr3 (10-125)||(30311304-30311421)
chr3 (10-88)||(44743816-44743896)
chr3 (49-124)||(9557319-9557394)
chr3 (31-124)||(5499391-5499484)
chr3 (10-124)||(10499070-10499186)
chr3 (10-124)||(46518627-46518743)
chr3 (10-123)||(51903839-51903954)
chr3 (30-124)||(31520588-31520682)
chr3 (10-112)||(4844472-4844576)
chr3 (10-112)||(4870168-4870272)
chr3 (48-125)||(32651439-32651515)
chr3 (11-123)||(37788428-37788541)
chr3 (31-123)||(4222141-4222233)
chr3 (48-120)||(16891383-16891454)
chr3 (52-123)||(3054994-3055065)
chr3 (10-109)||(5166442-5166541)
chr3 (10-124)||(27093323-27093438)
chr3 (28-111)||(47236952-47237035)
chr3 (47-112)||(2667873-2667938)
chr3 (10-123)||(16354855-16354968)
chr3 (48-125)||(36720379-36720456)
chr3 (10-81)||(20501738-20501810)
chr3 (11-88)||(28703366-28703445)
[»] scaffold0002 (1 HSPs)
scaffold0002 (11-120)||(94935-95044)
[»] chr5 (20 HSPs)
chr5 (31-120)||(21086717-21086806)
chr5 (10-123)||(8278236-8278351)
chr5 (10-123)||(29075781-29075896)
chr5 (10-123)||(25627057-25627171)
chr5 (10-123)||(16773807-16773922)
chr5 (31-123)||(21589288-21589380)
chr5 (10-102)||(43442217-43442311)
chr5 (10-123)||(21549099-21549213)
chr5 (30-124)||(26078034-26078128)
chr5 (10-125)||(30109270-30109386)
chr5 (30-124)||(34984805-34984899)
chr5 (10-123)||(7918430-7918545)
chr5 (28-124)||(29692367-29692463)
chr5 (14-102)||(18595966-18596056)
chr5 (94-125)||(36497673-36497704)
chr5 (30-124)||(14285160-14285254)
chr5 (10-120)||(12877696-12877808)
chr5 (30-123)||(16457810-16457903)
chr5 (31-123)||(6844729-6844821)
chr5 (10-123)||(22661214-22661329)
[»] chr6 (8 HSPs)
chr6 (10-124)||(12188264-12188380)
chr6 (13-123)||(30127400-30127512)
chr6 (10-125)||(31622952-31623069)
chr6 (11-125)||(12234469-12234585)
chr6 (29-102)||(28363958-28364031)
chr6 (31-124)||(33549103-33549196)
chr6 (49-102)||(24555740-24555793)
chr6 (48-121)||(32613141-32613214)
[»] scaffold0258 (1 HSPs)
scaffold0258 (10-123)||(15284-15399)
[»] scaffold0194 (1 HSPs)
scaffold0194 (28-112)||(13027-13111)
[»] scaffold0417 (1 HSPs)
scaffold0417 (77-124)||(10218-10265)
[»] scaffold0291 (1 HSPs)
scaffold0291 (48-123)||(2471-2546)
[»] scaffold0299 (1 HSPs)
scaffold0299 (48-110)||(11541-11603)
[»] scaffold0009 (1 HSPs)
scaffold0009 (73-123)||(19873-19923)
[»] scaffold0032 (1 HSPs)
scaffold0032 (31-123)||(112282-112374)


Alignment Details
Target: chr2 (Bit Score: 288; Significance: 1e-161; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 10 - 345
Target Start/End: Original strand, 22363152 - 22363487
Alignment:
Q  10 gaagaagctaaattaacccccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggcc 109  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||| ||||| || |||||||||||| ||||||||    
T  22363152 gaagaagctaaattaacccccaaattggcaccggagggaatcgaaccttagatcttgaggcggagcacattcccaaattgcaaaccaatactatcaggcc 22363251  T
Q  110 aactcaagtgggtttacagagaatcacagttaaaatcgcagttgtagtttctgtgatcatagaaacatgacaaactttgacaccatggacatgagaaact 209  Q
    ||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22363252 aactcaagtggatttacatagaatcacagttaaaatcgcagttgcagtttctgtgatcatagaaacatgacaaactttgacaccatggacatgagaaact 22363351  T
Q  210 tcgacaccatggctcacaccgtggttgcagagcttttcttaaagaggacaccaggtttcagcttctacctccatttaaatttatactcttacacctattg 309  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22363352 tcgacaccatggctcacaccgtggttgcagagcttttcttaaatatgacaccaggtttcagcttctacctccatttaaatttatactcttacacctattg 22363451  T
Q  310 ttgaaagaagattaaggaaacttctcttacctacat 345  Q
    ||||||||||||||||||||||||||||||||||||    
T  22363452 ttgaaagaagattaaggaaacttctcttacctacat 22363487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 4060175 - 4060293
Alignment:
Q  10 gaagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    |||||||||||| ||||||||  |||||| |||| |||  |||||||||| ||||||||||| ||||||||||| ||| |  |||||||||||||  |||    
T  4060175 gaagaagctaaactaaccccctcaaattgacaccagagagaatcgaacctgagatcttgaggagaagcacactctcaggtttcaaaccaataccactagg 4060274  T
Q  108 ccaactcaagtgggtttac 126  Q
    ||||| |||||||||||||    
T  4060275 ccaacccaagtgggtttac 4060293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 125
Target Start/End: Complemental strand, 42602669 - 42602552
Alignment:
Q  10 gaagaagctaaattaaccc--ccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    ||||||||||||||| |||  |||||||||||||||||  |||| ||||| ||| ||||||  | ||||||||||||| || ||| |||||||||  |||    
T  42602669 gaagaagctaaattagcccacccaaattggcaccggagagaatcaaacctaagaccttgagaaggagcacactcccaggtcccaagccaataccactagg 42602570  T
Q  108 ccaactcaagtgggttta 125  Q
    ||||| ||||||||||||    
T  42602569 ccaacccaagtgggttta 42602552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 37480190 - 37480074
Alignment:
Q  10 gaagaagctaaattaaccc--ccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    ||||||||||||||| |||  ||||||||| ||||| |  |||||||||| ||| ||||||| | ||||||||| ||| || ||| ||||||||| ||||    
T  37480190 gaagaagctaaattagcccacccaaattgggaccggggagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccaccagg 37480091  T
Q  108 ccaactcaagtgggttt 124  Q
    ||||| |||||||||||    
T  37480090 ccaacccaagtgggttt 37480074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 122
Target Start/End: Original strand, 16918539 - 16918653
Alignment:
Q  10 gaagaagctaaattaaccc--ccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    |||||||||||| ||| ||  ||||| ||||||| |||  |||| ||||| ||| ||||||| | |||||||||||||||| |||||||||||||  |||    
T  16918539 gaagaagctaaactaaaccatccaaagtggcaccagagagaatccaacctaagaccttgaggaggagcacactcccagatcccaaaccaataccactagg 16918638  T
Q  108 ccaactcaagtgggt 122  Q
    ||||| |||||||||    
T  16918639 ccaacccaagtgggt 16918653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 42327376 - 42327471
Alignment:
Q  28 cccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggtt 123  Q
    ||||||||||||||| ||  |||||||||| ||| ||||||| | ||||||||||||| || ||| |||||||||  |||||||| ||||||||||    
T  42327376 cccaaattggcaccgaagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42327471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 125
Target Start/End: Original strand, 34041549 - 34041666
Alignment:
Q  10 gaagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    |||||||||||| ||||||||  ||||||||||| |||| |||| ||||| ||| ||||||| | ||||||||| ||||||  ||  ||||||||  |||    
T  34041549 gaagaagctaaactaaccccctcaaattggcaccagagggaatcaaacctgagaccttgaggaggagcacactctcagatcctaagtcaataccactagg 34041648  T
Q  108 ccaactcaagtgggttta 125  Q
    ||||| ||||||||||||    
T  34041649 ccaacccaagtgggttta 34041666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 29503346 - 29503269
Alignment:
Q  48 aatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggttta 125  Q
    |||||||||| ||| ||||||| | ||||||||||||| || |||||||||||||  |||||||| ||||||||||||    
T  29503346 aatcgaacctgagaccttgaggaggagcacactcccaggtcccaaaccaataccactaggccaacccaagtgggttta 29503269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 123
Target Start/End: Original strand, 41908599 - 41908714
Alignment:
Q  10 gaagaagctaaattaaccc--ccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    |||||||||||| || |||  ||||||||||||||| | ||||||||| | ||| ||||||| | |||||||||| || || |||||| | |||| ||||    
T  41908599 gaagaagctaaactagcccacccaaattggcaccggggataatcgaacttgagaccttgaggaggagcacactccaaggtctcaaaccgacaccaccagg 41908698  T
Q  108 ccaactcaagtgggtt 123  Q
    ||||| ||||||||||    
T  41908699 ccaacccaagtgggtt 41908714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 42922529 - 42922414
Alignment:
Q  11 aagaagctaaattaacccc--caaattggcaccggaggtaatcgaaccttagatctt-gaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    ||||||||||| |||||||  |||||||||||| |||  |||||||||| ||| ||| |||| | ||||||||||||| |  ||| |||||||||  |||    
T  42922529 aagaagctaaactaaccccatcaaattggcaccagagagaatcgaacctgagacctttgaggaggagcacactcccaggttccaagccaataccactagg 42922430  T
Q  108 ccaactcaagtgggtt 123  Q
    ||||| ||||||||||    
T  42922429 ccaacccaagtgggtt 42922414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 7798997 - 7799112
Alignment:
Q  10 gaagaagctaaattaaccccc-aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggc 108  Q
    ||||||||||||||| || |  |||||||||| ||||  ||||||| || |||||| |||| | ||||||||||||  || ||| ||||||||| ||||     
T  7798997 gaagaagctaaattagccacttaaattggcactggagagaatcgaatctgagatctcgaggaggagcacactcccaagtcccaagccaataccaccagga 7799096  T
Q  109 caactcaagtgggttt 124  Q
    |||| |||||||||||    
T  7799097 caacccaagtgggttt 7799112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 123
Target Start/End: Original strand, 23052524 - 23052599
Alignment:
Q  48 aatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggtt 123  Q
    |||||||||| ||| ||||||| ||||||||||||||  || ||| ||||||||| |||||||||  |||||||||    
T  23052524 aatcgaacctgagaccttgaggagaagcacactcccaagtcccaagccaataccaccaggccaacctaagtgggtt 23052599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 119
Target Start/End: Complemental strand, 24191888 - 24191842
Alignment:
Q  73 agcacactcccagatcgcaaaccaataccatcaggccaactcaagtg 119  Q
    ||||||||| ||| || ||| ||||||||||||||||||||||||||    
T  24191888 agcacactctcaggtcccaagccaataccatcaggccaactcaagtg 24191842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 3001467 - 3001378
Alignment:
Q  35 tggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggttt 124  Q
    ||||||| ||| ||||||||||| ||||||  ||| | |||||||||| ||||| |||  ||||||||  |||||||| |||||| ||||    
T  3001467 tggcaccagagataatcgaacctgagatctcaaggaggagcacactcctagatctcaagtcaataccactaggccaacccaagtgagttt 3001378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 12261414 - 12261361
Alignment:
Q  72 aagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggttta 125  Q
    ||||||||| | ||||| |||||||| | |||||| ||||||||||||||||||    
T  12261414 aagcacacttcaagatcccaaaccaacatcatcagaccaactcaagtgggttta 12261361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 33962796 - 33962857
Alignment:
Q  59 agatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgg 120  Q
    |||||| |||| | ||||||||||||| || |||||||||| ||| |||||||| |||||||    
T  33962796 agatctcgaggaggagcacactcccagttcccaaaccaatatcattaggccaacccaagtgg 33962857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 123
Target Start/End: Complemental strand, 1435178 - 1435064
Alignment:
Q  10 gaagaagctaaattaaccc--ccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    ||||||||||||||| |||  |||||||| |||| |||  |||||||| | ||| ||||||| |||||||||||| | ||| ||| ||| |||||  | |    
T  1435178 gaagaagctaaattagcccacccaaattgacaccagagagaatcgaac-tgagaccttgaggagaagcacactcctaaatcccaagccagtaccactatg 1435080  T
Q  108 ccaactcaagtgggtt 123  Q
    ||||| ||||||||||    
T  1435079 ccaacccaagtgggtt 1435064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 14500391 - 14500276
Alignment:
Q  11 aagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggc 108  Q
    ||||||||||| || |||||  ||||||||||| |||  ||||||| || ||| || |||| | |||||||||||||||| ||| |  ||||||  ||||    
T  14500391 aagaagctaaactatccccctcaaattggcaccagagagaatcgaatctgagacctagaggaggagcacactcccagatctcaagcttataccactaggc 14500292  T
Q  109 caactcaagtgggttt 124  Q
    |||  |||||||||||    
T  14500291 caaaccaagtgggttt 14500276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 123
Target Start/End: Complemental strand, 19016123 - 19016031
Alignment:
Q  31 aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggtt 123  Q
    ||||||||||||| |  |||| ||| | ||| || |||| | ||||||||||||  || ||| ||||||||||||| ||||| ||||||||||    
T  19016123 aaattggcaccggggagaatcaaacttgagacctcgaggaggagcacactcccaagtctcaagccaataccatcagaccaacccaagtgggtt 19016031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 21195638 - 21195713
Alignment:
Q  11 aagaagctaaattaaccc--ccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactccca 84  Q
    |||||||||||||| |||  |||||||| |||  |||| |||||||||| ||| ||||||| | ||||||||||||    
T  21195638 aagaagctaaattagcccatccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactccca 21195713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 123
Target Start/End: Complemental strand, 32106658 - 32106566
Alignment:
Q  31 aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggtt 123  Q
    |||||||||||||||  |||||| ||  ||| |||||| || |||||||||| || || |||  ||| |||| ||||||||| ||||||||||    
T  32106658 aaattggcaccggagagaatcgagcccaagaccttgagagggagcacactccaaggtcccaagtcaacaccaccaggccaacccaagtgggtt 32106566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 124
Target Start/End: Complemental strand, 39715067 - 39714991
Alignment:
Q  48 aatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggttt 124  Q
    |||||||||| ||| || |||| | ||||||||||||| || |||  |||||||| || |||||| |||||||||||    
T  39715067 aatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccatgccaacccaagtgggttt 39714991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 2e-28; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 51250484 - 51250599
Alignment:
Q  11 aagaagctaaattaaccc--ccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggc 108  Q
    |||||||||||||| |||  |||||||||||||||||| |||||||| | ||||||||||| | |||||||||||||||| ||| ||||||||| |||||    
T  51250484 aagaagctaaattagcccacccaaattggcaccggagggaatcgaacttgagatcttgaggcggagcacactcccagatcccaagccaataccaccaggc 51250583  T
Q  109 caactcaagtgggttt 124  Q
    |||| |||||||||||    
T  51250584 caacccaagtgggttt 51250599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 38869883 - 38869789
Alignment:
Q  10 gaagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaatacca 102  Q
    |||||||||||| ||||||||  ||||||||||| |||| |||||||||| ||| ||||||| | |||||||||||||||| ||| |||||||||    
T  38869883 gaagaagctaaactaaccccctcaaattggcaccagagggaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatacca 38869789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 123
Target Start/End: Original strand, 37109312 - 37109427
Alignment:
Q  10 gaagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    |||||| ||||| ||||||||  ||||||||||| |||  |||||||||| ||| ||||||| | ||||||||||||| || ||| |||||||||  |||    
T  37109312 gaagaaactaaactaaccccctcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactagg 37109411  T
Q  108 ccaactcaagtgggtt 123  Q
    ||||| ||||||||||    
T  37109412 ccaacccaagtgggtt 37109427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 123
Target Start/End: Complemental strand, 28635811 - 28635696
Alignment:
Q  10 gaagaagctaaattaaccc--ccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    ||||||||||||||| |||  ||||||||||||| |||  |||||||||| ||| ||  ||| | |||||||||||||||| |||  || ||||| ||||    
T  28635811 gaagaagctaaattagcccacccaaattggcaccagagagaatcgaacctaagacctccaggaggagcacactcccagatcccaagtcagtaccaccagg 28635712  T
Q  108 ccaactcaagtgggtt 123  Q
     |||| ||||||||||    
T  28635711 acaacccaagtgggtt 28635696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 41346964 - 41347036
Alignment:
Q  48 aatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgg 120  Q
    |||||||||| |||  | |||| | |||| ||||||||||| ||||||||||||||||||||||| |||||||    
T  41346964 aatcgaacctgagacttcgaggaggagcatactcccagatctcaaaccaataccatcaggccaacccaagtgg 41347036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 40283987 - 40284060
Alignment:
Q  48 aatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtggg 121  Q
    |||| ||||||||| ||||||| || |||||||||||  || ||| |||||||||||| |||||| ||||||||    
T  40283987 aatcaaaccttagaccttgaggagatgcacactcccaagtcccaagccaataccatcatgccaacccaagtggg 40284060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 123
Target Start/End: Original strand, 19238542 - 19238653
Alignment:
Q  14 aagctaaattaaccc--ccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaa 111  Q
    ||||||||||| |||  ||||||||| ||||| |  |||||||||  ||| || |||| | ||||||||||||  || ||| ||||||||| ||||||||    
T  19238542 aagctaaattagcccacccaaattggtaccggggagaatcgaacccgagacctcgaggaggagcacactcccaagtcccaagccaataccaccaggccaa 19238641  T
Q  112 ctcaagtgggtt 123  Q
    | ||||||||||    
T  19238642 cccaagtgggtt 19238653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 123
Target Start/End: Complemental strand, 39509181 - 39509070
Alignment:
Q  14 aagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaa 111  Q
    ||||||||||||||| |  |||||| ||| || |  |||||||||| ||| || |||| | |||||||||||||||| ||| ||| |||||| || ||||    
T  39509181 aagctaaattaacccacctaaattgccactggggagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccattaccatgagaccaa 39509082  T
Q  112 ctcaagtgggtt 123  Q
    | ||||||||||    
T  39509081 cccaagtgggtt 39509070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 123
Target Start/End: Original strand, 55427165 - 55427276
Alignment:
Q  14 aagctaaattaaccc--ccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaa 111  Q
    ||||||||||| |||  ||||||||||||||  |  |||||||||| ||| || |||  | |||| |||||||| || ||| ||||||||| ||||||||    
T  55427165 aagctaaattagcccacccaaattggcaccgcggagaatcgaacctgagacctcgagcaggagcagactcccaggtcccaagccaataccaccaggccaa 55427264  T
Q  112 ctcaagtgggtt 123  Q
    | ||||||||||    
T  55427265 cccaagtgggtt 55427276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 48 - 123
Target Start/End: Complemental strand, 46545786 - 46545711
Alignment:
Q  48 aatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggtt 123  Q
    ||||||| || ||||||||||| | ||||||||| ||| || ||| |||||||||  |||||||| ||||||||||    
T  46545786 aatcgaatctgagatcttgaggaggagcacactctcaggtctcaagccaataccactaggccaacccaagtgggtt 46545711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 27965537 - 27965587
Alignment:
Q  74 gcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggttt 124  Q
    ||||||||||||||| ||| |||||||||  |||||||| |||||||||||    
T  27965537 gcacactcccagatcccaagccaataccactaggccaacccaagtgggttt 27965587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 123
Target Start/End: Complemental strand, 40285673 - 40285623
Alignment:
Q  73 agcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggtt 123  Q
    |||||||||||||||  |||| |||||||| || |||||||||||||||||    
T  40285673 agcacactcccagattccaaatcaataccaccatgccaactcaagtgggtt 40285623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 120
Target Start/End: Original strand, 7292759 - 7292871
Alignment:
Q  10 gaagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    |||||||||||| ||||||||  ||||||||||  |||  |||||||||| |||  |||||| | ||||||||||||| |  ||| |||||||||  ||     
T  7292759 gaagaagctaaactaaccccctcaaattggcactagagagaatcgaacctgagactttgaggaggagcacactcccaggttccaagccaataccactaga 7292858  T
Q  108 ccaactcaagtgg 120  Q
    ||||| |||||||    
T  7292859 ccaacccaagtgg 7292871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 7949415 - 7949531
Alignment:
Q  10 gaagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    ||||||||||||||| ||| |  |||||| |||| |||  |||||||||| ||| ||||||| | |||||||||| || || ||| ||||||||   |||    
T  7949415 gaagaagctaaattagcccacctaaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccgctagg 7949514  T
Q  108 ccaactcaagtgggttt 124  Q
    ||| | |||||||||||    
T  7949515 ccagcccaagtgggttt 7949531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 15180853 - 15180762
Alignment:
Q  10 gaagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaatacca 102  Q
    |||||||||||| ||||||||  ||||||||||| |||  |||||||||| ||| |||||||   || |||||||||| || ||| |||||||||    
T  15180853 gaagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctaagaccttgagg---agtacactcccaggtcccaagccaatacca 15180762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 19680750 - 19680866
Alignment:
Q  11 aagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggc 108  Q
    ||||||||||| ||||| ||  ||||||||||| |||  |||||||||| ||| |||||||   ||||||||||||  || ||| | |||||||  ||||    
T  19680750 aagaagctaaactaacctccttaaattggcaccagagagaatcgaacctaagaccttgaggaagagcacactcccaagtcccaagcgaataccactaggc 19680849  T
Q  109 caactcaagtgggttta 125  Q
    |||  ||||||||||||    
T  19680850 caatccaagtgggttta 19680866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 32003139 - 32003086
Alignment:
Q  73 agcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggtttac 126  Q
    ||||||||  |||||| ||||||||||||| || | ||||||||||||||||||    
T  32003139 agcacactttcagatctcaaaccaataccaccaagtcaactcaagtgggtttac 32003086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 123
Target Start/End: Original strand, 37274420 - 37274536
Alignment:
Q  10 gaagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaa-taccatcag 106  Q
    ||||||||||||||| ||| |  ||||| ||||| |||  |||||||||| ||| ||||||| | ||||||||||||| || ||| |||| ||| |  ||    
T  37274420 gaagaagctaaattagcccacttaaattagcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggtcccaagccaattacgactag 37274519  T
Q  107 gccaactcaagtgggtt 123  Q
    |||||| ||||||||||    
T  37274520 gccaacccaagtgggtt 37274536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 4249292 - 4249189
Alignment:
Q  10 gaagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    |||||||||||| ||||||||  ||||||||||| |||  |||| ||||| ||| ||||||| | |||||||||| | ||| ||| || ||||||  |||    
T  4249292 gaagaagctaaactaaccccctcaaattggcaccagagagaatcaaacctgagaccttgaggaggagcacactccaaaatcccaagcctataccactagg 4249193  T
Q  108 ccaa 111  Q
    ||||    
T  4249192 ccaa 4249189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 124
Target Start/End: Complemental strand, 12798759 - 12798683
Alignment:
Q  48 aatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggttt 124  Q
    |||||||||| | | || |||| | |||||||||||||||| |||||||||||||   || |||| |||||||||||    
T  12798759 aatcgaacctgaaacctcgaggagcagcacactcccagatctcaaaccaataccactcggtcaacccaagtgggttt 12798683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 23378071 - 23377980
Alignment:
Q  10 gaagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaata 99  Q
    |||||||||||| || |||||  ||||||||||  |||  |||||||||| ||| ||||||| | ||||||||||||| || ||| ||||||    
T  23378071 gaagaagctaaactagccccctcaaattggcactagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaata 23377980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 124
Target Start/End: Original strand, 37720215 - 37720291
Alignment:
Q  48 aatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggttt 124  Q
    ||||||||||  || ||||||| |  |||||||||||| || ||| |||||| || ||||||||| |||||||||||    
T  37720215 aatcgaacctgggaccttgaggaggggcacactcccaggtcccaagccaataacaccaggccaacccaagtgggttt 37720291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 6e-22; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 14 - 124
Target Start/End: Complemental strand, 51814605 - 51814493
Alignment:
Q  14 aagctaaattaaccc--ccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaa 111  Q
    ||||||||||| |||  |||||||||||||||||  |||||||||| ||| ||||||| | ||||||||| |||||| |||  |||||||||||||||||    
T  51814605 aagctaaattagcccacccaaattggcaccggagagaatcgaacctgagaccttgaggaggagcacactctcagatctcaagtcaataccatcaggccaa 51814506  T
Q  112 ctcaagtgggttt 124  Q
    | |||||||||||    
T  51814505 cccaagtgggttt 51814493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 8177143 - 8177259
Alignment:
Q  10 gaagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    |||||||||||| ||||||||  ||||||||||| |||  |||||||||| | | ||||||| | |||||||||||||||| ||| |||||||||  |||    
T  8177143 gaagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccactagg 8177242  T
Q  108 ccaactcaagtgggttt 124  Q
    ||||||||| |||||||    
T  8177243 ccaactcaaatgggttt 8177259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 33700735 - 33700847
Alignment:
Q  11 aagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggc 108  Q
    |||||| |||| ||||||||  ||||||||||| |||  |||||||||| ||| ||||||| | |||||||||||||||  ||| |||||||||  ||||    
T  33700735 aagaagttaaactaacccccttaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccagattccaagccaataccactaggc 33700834  T
Q  109 caactcaagtggg 121  Q
    |||| ||||||||    
T  33700835 caacccaagtggg 33700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 2799977 - 2799874
Alignment:
Q  10 gaagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    |||||||||||| ||||||||  ||||||||||| |||  |||||||||| ||| ||||||| | |||||||||||||||| ||| || ||||||  |||    
T  2799977 gaagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagcctataccactagg 2799878  T
Q  108 ccaa 111  Q
    ||||    
T  2799877 ccaa 2799874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 123
Target Start/End: Original strand, 31794225 - 31794340
Alignment:
Q  10 gaagaagctaaattaaccc--ccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    ||||||||||||||| |||  |||||||| |||| |||| ||||||||  |||| ||||||| | ||||||||||||  || ||| |||||||||  |||    
T  31794225 gaagaagctaaattagcccacccaaattgacaccagagggaatcgaactctagaccttgaggaggagcacactcccaagtcccaagccaataccactagg 31794324  T
Q  108 ccaactcaagtgggtt 123  Q
    ||||| ||||||||||    
T  31794325 ccaacccaagtgggtt 31794340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 36371584 - 36371469
Alignment:
Q  11 aagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggc 108  Q
    ||||||||||| ||||||||  ||||||||| | |||  |||||||||| ||| ||||||| | ||||||||||||| |  ||| |||||||||  ||||    
T  36371584 aagaagctaaactaaccccctcaaattggcatcagagagaatcgaacctcagaccttgaggaggagcacactcccaggttccaagccaataccactaggc 36371485  T
Q  109 caactcaagtgggttt 124  Q
    |||| |||||||||||    
T  36371484 caacccaagtgggttt 36371469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 52336756 - 52336839
Alignment:
Q  29 ccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaac 112  Q
    |||||||| |||| ||| ||||||||||| ||||||| ||| | |||||||||||||||| ||| |||||||||  ||||||||    
T  52336756 ccaaattgacaccagagataatcgaacctgagatcttaaggaggagcacactcccagatcccaagccaataccactaggccaac 52336839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 124
Target Start/End: Complemental strand, 41508891 - 41508830
Alignment:
Q  63 cttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggttt 124  Q
    ||||||| | |||||||||||||||| ||||||| ||||| ||||||||| |||||||||||    
T  41508891 cttgaggaggagcacactcccagatcccaaaccagtaccaccaggccaacccaagtgggttt 41508830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 123
Target Start/End: Original strand, 9165156 - 9165271
Alignment:
Q  10 gaagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    |||||| ||||| ||||||||  ||||||||||| |||  ||| |||||| |||  |||||| | ||||||||||||| || ||| |||||||||  |||    
T  9165156 gaagaaactaaagtaaccccctcaaattggcaccagagagaattgaacctgagactttgaggaggagcacactcccaggtcccaagccaataccactagg 9165255  T
Q  108 ccaactcaagtgggtt 123  Q
    ||||| ||||||||||    
T  9165256 ccaacccaagtgggtt 9165271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 125
Target Start/End: Complemental strand, 40257514 - 40257397
Alignment:
Q  10 gaagaagctaaattaaccc--ccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    |||||||||||| || |||  |||||||| |||||||   ||| |||| | ||| || |||| | ||||||||||||| || ||| ||||||||| ||||    
T  40257514 gaagaagctaaactagcccacccaaattgacaccggatagaattgaacttgagacctcgaggaggagcacactcccaggtctcaagccaataccaccagg 40257415  T
Q  108 ccaactcaagtgggttta 125  Q
    ||||| ||||||||||||    
T  40257414 ccaacccaagtgggttta 40257397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 34228965 - 34228873
Alignment:
Q  31 aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggttt 124  Q
    |||||||||||||||  |||| ||||| ||| |||||| |||| |||||||| || || ||| |||| |||| ||| |||||||||||||||||    
T  34228965 aaattggcaccggagagaatccaacctgagaccttgagaggaa-cacactccgaggtcccaagccaacaccaccagaccaactcaagtgggttt 34228873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 45235391 - 45235456
Alignment:
Q  59 agatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggttt 124  Q
    |||||| |||| | ||||||||||||  || ||||||||||||||||| ||||| |||||||||||    
T  45235391 agatctcgaggaggagcacactcccaagtcccaaaccaataccatcagaccaacccaagtgggttt 45235456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 123
Target Start/End: Original strand, 18037574 - 18037689
Alignment:
Q  10 gaagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    ||||||||||||||| ||| |  |||| ||||||||||  |||||||| | |||||| ||   | ||||||||||||  || |||||||||| ||||||     
T  18037574 gaagaagctaaattagcccacctaaatcggcaccggagagaatcgaacttgagatctcgaaaaggagcacactcccaagtcccaaaccaatatcatcaga 18037673  T
Q  108 ccaactcaagtgggtt 123  Q
    ||||| ||||||||||    
T  18037674 ccaacccaagtgggtt 18037689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 31605829 - 31605924
Alignment:
Q  28 cccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggtt 123  Q
    |||||||||||||||| |  |||||||| | ||| ||||||| | |||||||| | || || ||| |||| ||||||||||||||  |||||||||    
T  31605829 cccaaattggcaccggggagaatcgaacttgagaccttgaggaggagcacacttcaaggtcccaagccaacaccatcaggccaacataagtgggtt 31605924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 125
Target Start/End: Original strand, 46146228 - 46146345
Alignment:
Q  10 gaagaagctaaattaaccc--ccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    |||||||||| |||||| |  ||||||||||||||  |  ||| |||||| |||  |||| ||| |||||| ||||||||| ||| | ||||||||| |     
T  46146228 gaagaagctatattaacacacccaaattggcaccgaggaaaattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcgga 46146327  T
Q  108 ccaactcaagtgggttta 125  Q
    ||||| ||||||||||||    
T  46146328 ccaacccaagtgggttta 46146345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 6122909 - 6122833
Alignment:
Q  10 gaagaagctaaattaaccc--ccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactccca 84  Q
    ||||||||||||||| |||  |||||||| |||  |||| |||||||||| ||| ||||||| | ||||||||||||    
T  6122909 gaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactccca 6122833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 125
Target Start/End: Complemental strand, 4566662 - 4566546
Alignment:
Q  10 gaagaagctaaattaaccccc-aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggc 108  Q
    |||||||||||| |||||||  |||||| || | |||  |||||||||| ||| | ||||| | ||||||||||||| |  ||| |||||| ||  ||||    
T  4566662 gaagaagctaaactaaccccttaaattgacatcagagagaatcgaacctgagaccctgaggaggagcacactcccaggttccaagccaatatcactaggc 4566563  T
Q  109 caactcaagtgggttta 125  Q
    |||| ||||||||||||    
T  4566562 caacccaagtgggttta 4566546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 15786321 - 15786373
Alignment:
Q  48 aatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaatac 100  Q
    |||||||||| ||| ||||||| | |||||||||||||||| ||| |||||||    
T  15786321 aatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatac 15786373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 112
Target Start/End: Complemental strand, 17410306 - 17410242
Alignment:
Q  48 aatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaac 112  Q
    |||||||| | |||||| |||| | | |||||||||||||| |||||||||||||  ||||||||    
T  17410306 aatcgaacttgagatctcgaggaggaccacactcccagatcccaaaccaataccactaggccaac 17410242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 40810582 - 40810495
Alignment:
Q  10 gaagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaacc 95  Q
    |||||||||||| |||||| |  ||||||||||| |||  |||||||||| ||| ||||| | | | |||||||||||||| ||||||    
T  40810582 gaagaagctaaactaaccctctcaaattggcaccagagagaatcgaacctgagaccttgaagaggaacacactcccagatcccaaacc 40810495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 6e-19; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 10 - 123
Target Start/End: Complemental strand, 18540413 - 18540298
Alignment:
Q  10 gaagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    ||||||||||||||||||| |  ||||||||||| |||  |||||||||| ||| ||||||| |||| |||||||||| || ||| |||||||||  |||    
T  18540413 gaagaagctaaattaaccctctcaaattggcaccagagagaatcgaacctgagaccttgaggagaagtacactcccaggtcccaagccaataccactagg 18540314  T
Q  108 ccaactcaagtgggtt 123  Q
    ||||| ||||||||||    
T  18540313 ccaacccaagtgggtt 18540298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 968476 - 968362
Alignment:
Q  11 aagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggc 108  Q
    |||||||||||||| ||| |  ||||||||| |||||  |||||||||| ||| || |||| | ||||||||||||| || ||| ||||||||| |||||    
T  968476 aagaagctaaattagcccacctaaattggcatcggagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccaggc 968377  T
Q  109 caactcaagtgggtt 123  Q
    |||||||||||||||    
T  968376 caactcaagtgggtt 968362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 28783175 - 28783059
Alignment:
Q  10 gaagaagctaaattaaccc--ccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    ||||||||||||||| |||  ||||||||||||||  |  |||||||| | ||| ||||||| | ||||||||||||| || ||| ||||||||| || |    
T  28783175 gaagaagctaaattagcccacccaaattggcaccgaggagaatcgaacatgagaccttgaggaggagcacactcccaggtctcaagccaataccaccaag 28783076  T
Q  108 ccaactcaagtgggttt 124  Q
    ||||| |||||||||||    
T  28783075 ccaacccaagtgggttt 28783059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 36205270 - 36205198
Alignment:
Q  48 aatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgg 120  Q
    |||||||| | ||| ||||||| | |||||||||||||||| |||||||||| |||||| ||||| |||||||    
T  36205270 aatcgaacatgagaccttgaggaggagcacactcccagatctcaaaccaataacatcagaccaacccaagtgg 36205198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 2203603 - 2203494
Alignment:
Q  14 aagctaaattaaccc--ccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaa 111  Q
    ||||||||||| |||  ||||||||||||||| |  ||| || ||| ||| ||||||| | ||||||||||||| || ||| |||||||||  |||||||    
T  2203603 aagctaaattagcccacccaaattggcaccggggagaattgaccctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaa 2203504  T
Q  112 ctcaagtggg 121  Q
    | ||||||||    
T  2203503 cccaagtggg 2203494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 16852415 - 16852338
Alignment:
Q  48 aatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggttta 125  Q
    |||||||||| ||| || |||| | ||||||||||||| || ||| |||||||||  |||||||| ||||||||||||    
T  16852415 aatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttta 16852338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 19703488 - 19703565
Alignment:
Q  48 aatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggttta 125  Q
    |||||||||| ||| ||||||| | ||||||||| ||| || ||| |||||||||  |||||||| ||||||||||||    
T  19703488 aatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccactaggccaacccaagtgggttta 19703565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 44780075 - 44780191
Alignment:
Q  10 gaagaagctaaattaaccc--ccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    ||||||||||||||| |||  |||||||| |||  |||| |||| ||||| ||| ||||||| | ||||||||||||  || ||| ||||| |||  |||    
T  44780075 gaagaagctaaattagcccacccaaattgacactagagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaagccaatgccactagg 44780174  T
Q  108 ccaactcaagtgggttt 124  Q
    ||||| |||||||||||    
T  44780175 ccaacccaagtgggttt 44780191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 133
Target Start/End: Complemental strand, 12988542 - 12988418
Alignment:
Q  10 gaagaagctaaattaacccc-caaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggc 108  Q
    |||||||||||| ||||||| |||||||||||| |||   ||||||||| | | ||||||| | |||||||| |||| |  ||| |||||||||  ||||    
T  12988542 gaagaagctaaactaacccctcaaattggcaccagagaggatcgaacctgaaaccttgaggaggagcacacttccaggttccaagccaataccactaggc 12988443  T
Q  109 caactcaagtgggtttacagagaat 133  Q
    |||  |||||||||||  |||||||    
T  12988442 caatccaagtgggttttaagagaat 12988418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 20994419 - 20994534
Alignment:
Q  11 aagaagctaaattaaccc--ccaaattggcaccggaggtaatcgaaccttagatcttgaggg-gaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    |||||||||||||| |||  ||||||||| ||| ||| ||||||| ||| |||  ||||||| | ||||||||||||| || |||  ||||||||  |||    
T  20994419 aagaagctaaattagcccatccaaattggtaccagagataatcgatcctgagactttgagggaggagcacactcccaggtcccaagtcaataccactagg 20994518  T
Q  108 ccaactcaagtgggtt 123  Q
    ||||| ||||||||||    
T  20994519 ccaacccaagtgggtt 20994534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 6536635 - 6536541
Alignment:
Q  10 gaagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaatacca 102  Q
    ||||||||||||||||||| |  ||||||||||| |||  ||| |||||| ||| ||||||| | |||||||||| || || ||| |||||||||    
T  6536635 gaagaagctaaattaacccacctaaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcctaggtcccaagccaatacca 6536541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 29858033 - 29858124
Alignment:
Q  31 aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggt 122  Q
    ||||||||||||  || |||||||||| ||| || |||| | ||||||||||| | || ||| ||||||||| ||||||||  |||||||||    
T  29858033 aaattggcaccgaggggaatcgaacctgagacctcgaggaggagcacactccctggtcccaagccaataccaccaggccaatccaagtgggt 29858124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 35287811 - 35287716
Alignment:
Q  28 cccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggtt 123  Q
    ||||||||||||||||||  |||||||| | | | ||||||| | |||||||||| | ||| ||| |||| |||| |||||| || ||||||||||    
T  35287811 cccaaattggcaccggagagaatcgaacatgataccttgaggaggagcacactccaaaatctcaagccaacaccaccaggcctacccaagtgggtt 35287716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 123
Target Start/End: Complemental strand, 33017328 - 33017214
Alignment:
Q  10 gaagaagctaaattaacccc-caaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggc 108  Q
    ||||||| |||| ||||||| |||||||||||| |||  |||||||||| ||| ||||||| | |||||||| |||| |  ||| ||||||  |  ||||    
T  33017328 gaagaagttaaactaacccctcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacacttccaggttccaagccaatatgacaaggc 33017229  T
Q  109 caactcaagtgggtt 123  Q
    |||| ||||||||||    
T  33017228 caacccaagtgggtt 33017214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 120
Target Start/End: Complemental strand, 2792735 - 2792646
Alignment:
Q  31 aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgg 120  Q
    |||||||||||||||  || ||||||| |||||| |||| | | || |||| |||||| |||  ||| ||||| ||||||||||||||||    
T  2792735 aaattggcaccggagagaaccgaacctgagatctagaggaggaacatactctcagatctcaagtcaaaaccattaggccaactcaagtgg 2792646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 100
Target Start/End: Original strand, 3305172 - 3305241
Alignment:
Q  31 aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaatac 100  Q
    ||||||||||| ||| ||||||||  | ||| ||||||| | ||||| |||||||||| |||||||||||    
T  3305172 aaattggcaccagagataatcgaatttgagaccttgaggaggagcacgctcccagatcccaaaccaatac 3305241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 3624655 - 3624582
Alignment:
Q  48 aatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtggg 121  Q
    |||||||||| ||| ||||| | | ||||||||||||| || ||| |||||||||  |||||||| ||||||||    
T  3624655 aatcgaacctgagaccttgaagaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 3624582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 3826778 - 3826855
Alignment:
Q  48 aatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggttta 125  Q
    |||||||||| |||||| | || | ||||||||| || || |||| |||||||||  |||||||| ||||||||||||    
T  3826778 aatcgaacctgagatctcgtggaggagcacactctcaaatggcaagccaataccactaggccaacccaagtgggttta 3826855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 4830535 - 4830486
Alignment:
Q  75 cacactcccagatcgcaaaccaataccatcaggccaactcaagtgggttt 124  Q
    ||||||| |||||| ||||| ||||||| ||||||||| |||||||||||    
T  4830535 cacactctcagatcccaaacaaataccaccaggccaacccaagtgggttt 4830486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 11492035 - 11492146
Alignment:
Q  11 aagaagctaaattaaccc--ccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggc 108  Q
    |||||||||||||| |||  |||||||| ||| | ||  |||||||||| ||| || |||  | |||||||||||||||| ||| ||||||||  || ||    
T  11492035 aagaagctaaattagcccacccaaattgacactgaagagaatcgaacctaagacctcgagaaggagcacactcccagatctcaagccaataccgacatgc 11492134  T
Q  109 caactcaagtgg 120  Q
    |||| |||||||    
T  11492135 caacccaagtgg 11492146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 123
Target Start/End: Original strand, 23361633 - 23361725
Alignment:
Q  31 aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggtt 123  Q
    |||||| |||| |||  ||| |||||| ||| ||||||| | |||||||||||| ||| |||  |||||||| |||| |||| ||||||||||    
T  23361633 aaattgacaccagagagaattgaacctgagaccttgaggaggagcacactcccatatcccaagtcaataccaccaggtcaacccaagtgggtt 23361725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 6e-19; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 10 - 123
Target Start/End: Original strand, 26459371 - 26459486
Alignment:
Q  10 gaagaagctaaattaacccc--caaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    |||||||||||| |||||||  |||||||||||| |||  |||||||||| ||| ||||||| | ||||||||||||| || ||| |||||||||  |||    
T  26459371 gaagaagctaaactaaccccttcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactagg 26459470  T
Q  108 ccaactcaagtgggtt 123  Q
    ||||| ||||||||||    
T  26459471 ccaacccaagtgggtt 26459486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 20952110 - 20952222
Alignment:
Q  11 aagaagctaaattaaccc---ccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    ||||||||||||||| ||   | |||||| ||| |||| |||||||| || |||| |||||| | ||||||||||||| || ||||||||||||||||||    
T  20952110 aagaagctaaattaatccatccaaaattgacacgggagataatcgaatctgagattttgaggaggagcacactcccaggtcccaaaccaataccatcagg 20952209  T
Q  108 ccaactcaagtgg 120  Q
     |||| |||||||    
T  20952210 tcaacccaagtgg 20952222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 2446423 - 2446307
Alignment:
Q  10 gaagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    ||||||||||||||| ||| |  |||| ||||||||||  |||||||| | |||||| |||| | ||||||||||||  || ||| |||||||||||||     
T  2446423 gaagaagctaaattagcccacctaaatcggcaccggagagaatcgaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccatcaga 2446324  T
Q  108 ccaactcaagtgggttt 124  Q
    ||||| |||||||||||    
T  2446323 ccaacccaagtgggttt 2446307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 30579450 - 30579334
Alignment:
Q  10 gaagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    ||||||||||||||| ||| |  ||||||||||| |||  |||||||||| ||| ||||||| |  | |||||||||| || ||| ||||||||| ||||    
T  30579450 gaagaagctaaattagcccacctaaattggcaccagagaaaatcgaacctgagaccttgaggaggtggacactcccaggtctcaagccaataccaccagg 30579351  T
Q  108 ccaactcaagtgggttt 124  Q
    ||||| |||||||||||    
T  30579350 ccaacccaagtgggttt 30579334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 125
Target Start/End: Original strand, 17040973 - 17041090
Alignment:
Q  10 gaagaagctaaattaaccc--ccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    |||||||||||||| ||||  ||||||||||||  |||  |||||||||| ||| ||||||| | |||||||| ||||||| ||| ||||| |||  ||     
T  17040973 gaagaagctaaattgacccacccaaattggcacttgagagaatcgaacctgagaccttgaggaggagcacacttccagatcccaagccaatgccactaga 17041072  T
Q  108 ccaactcaagtgggttta 125  Q
    ||||| ||||||||||||    
T  17041073 ccaacccaagtgggttta 17041090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 123
Target Start/End: Complemental strand, 25590726 - 25590611
Alignment:
Q  10 gaagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    ||||||||||||||| ||| |  |||||| ||||| ||  |||||||||  ||| || |||| | |||||||||||||||| ||| ||||||||| ||||    
T  25590726 gaagaagctaaattagcccactcaaattgacaccgaagaaaatcgaacccgagacctcgaggaggagcacactcccagatctcaagccaataccaacagg 25590627  T
Q  108 ccaactcaagtgggtt 123  Q
     |||| ||||||||||    
T  25590626 tcaacccaagtgggtt 25590611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 123
Target Start/End: Complemental strand, 39631959 - 39631844
Alignment:
Q  10 gaagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    |||||||||||| ||||||||  ||||||||||  |||  |||||||||| ||| ||||||| | |||  |||||||| || ||| |||||||||  |||    
T  39631959 gaagaagctaaactaaccccctcaaattggcacaagagagaatcgaacctgagaccttgaggaggagcttactcccaggtcccaagccaataccactagg 39631860  T
Q  108 ccaactcaagtgggtt 123  Q
    ||||| ||||||||||    
T  39631859 ccaacccaagtgggtt 39631844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 5273571 - 5273666
Alignment:
Q  28 cccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggtt 123  Q
    ||||||||||||||||||  |||| ||||| ||| ||||||| | |||||||||  || || ||| |||| |||| ||||||||| ||||||||||    
T  5273571 cccaaattggcaccggagacaatcaaacctaagaccttgaggaggagcacactctaaggtcccaagccaacaccaccaggccaacccaagtgggtt 5273666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 123
Target Start/End: Complemental strand, 18363810 - 18363696
Alignment:
Q  10 gaagaagctaaattaacccc-caaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggc 108  Q
    |||||||||||| ||||||| |||||||| ||  |||  |||| ||||| ||| ||||||| | |||||||||||| ||| ||| || ||||||  ||||    
T  18363810 gaagaagctaaactaacccctcaaattggtactagagagaatcaaacctgagaccttgaggaggagcacactcccaaatctcaagcctataccactaggc 18363711  T
Q  109 caactcaagtgggtt 123  Q
    |||| ||||||||||    
T  18363710 caacccaagtgggtt 18363696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 21854607 - 21854550
Alignment:
Q  64 ttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtggg 121  Q
    |||||| | |||||||||||||||| | | ||||||||||||||||||| ||||||||    
T  21854607 ttgaggaggagcacactcccagatccctagccaataccatcaggccaacccaagtggg 21854550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 22760956 - 22760863
Alignment:
Q  30 caaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggtt 123  Q
    |||||||||| ||| |  |||||||||| ||| ||||||| | ||||||||||||| || |||  |||||||| ||| ||||| ||||||||||    
T  22760956 caaattggcatcggggagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagtcaataccaccagaccaacccaagtgggtt 22760863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 123
Target Start/End: Complemental strand, 31835284 - 31835192
Alignment:
Q  31 aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggtt 123  Q
    ||||||||||| | | ||||||||||| ||| ||||||| | |||||||||| ||  | ||| |||| |||| ||||||||| ||||||||||    
T  31835284 aaattggcaccagggataatcgaacctgagaccttgaggaggagcacactccaagcacccaagccaacaccaccaggccaacccaagtgggtt 31835192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 43215298 - 43215183
Alignment:
Q  11 aagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggc 108  Q
    ||||||||||| ||||||||  |||||||||   |||  |||||||||| ||| ||||||| | |||||||||| || || ||| |||||||||  || |    
T  43215298 aagaagctaaactaaccccctcaaattggcataagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccactagac 43215199  T
Q  109 caactcaagtgggttt 124  Q
    |||| |||||||||||    
T  43215198 caacccaagtgggttt 43215183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 123
Target Start/End: Complemental strand, 48772014 - 48771938
Alignment:
Q  47 taatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggtt 123  Q
    ||||||||||| ||| ||  ||| | |||||||||||||||| ||| ||||||||| || |||||| ||||||||||    
T  48772014 taatcgaacctgagacctcaaggaggagcacactcccagatcccaagccaataccaccaagccaacccaagtgggtt 48771938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 41487474 - 41487361
Alignment:
Q  10 gaagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    ||||||||||||||| ||| |  |||||||||||||    |||||||||| ||| ||||||| |||   ||||||||  || ||| ||||||||| ||||    
T  41487474 gaagaagctaaattagcccacctaaattggcaccgggaagaatcgaacctgagaccttgaggagaa---cactcccaagtcccaagccaataccaccagg 41487378  T
Q  108 ccaactcaagtgggttt 124  Q
    ||||| |||||||||||    
T  41487377 ccaacccaagtgggttt 41487361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 112
Target Start/End: Original strand, 18847384 - 18847487
Alignment:
Q  10 gaagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    |||||||| |||||||||| |  |||||||||||||||  || ||||| | |||||||||| || |||||||||  ||||| ||| |||| |||| ||||    
T  18847384 gaagaagccaaattaacccgccaaaattggcaccggagagaaacgaacttgagatcttgagagg-agcacactcgaagatctcaagccaacaccaccagg 18847482  T
Q  108 ccaac 112  Q
    |||||    
T  18847483 ccaac 18847487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 38374583 - 38374676
Alignment:
Q  31 aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggttt 124  Q
    ||||||||||||| |  |||||||||| ||| ||||||| | |||||||||  || || ||| |||| |||| || |||||| |||||||||||    
T  38374583 aaattggcaccggggagaatcgaacctaagaccttgaggaggagcacactctaaggtcccaagccaacaccaccacgccaacccaagtgggttt 38374676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 45709692 - 45709785
Alignment:
Q  31 aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggttt 124  Q
    ||||||| | ||||| ||||||||||| ||| || |||| | ||||||||| |||||| ||| | |||||||  |||||||| ||| |||||||    
T  45709692 aaattggtatcggagataatcgaacctgagacctcgaggaggagcacactctcagatcccaagctaataccactaggccaacccaaatgggttt 45709785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 9183152 - 9183231
Alignment:
Q  10 gaagaagctaaattaaccc--ccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagat 87  Q
    |||||| |||||||| |||  |||||||| |||| ||| ||||||||||| |||  |||||| | |||||||||||||||    
T  9183152 gaagaaactaaattagcccacccaaattgacaccagagataatcgaacctgagactttgaggaggagcacactcccagat 9183231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 123
Target Start/End: Complemental strand, 19553545 - 19553454
Alignment:
Q  31 aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggtt 123  Q
    ||||||| ||||| |  ||| |||||| ||| ||||||| | ||||||||||||| || ||| ||||||||| ||||||||| |||| |||||    
T  19553545 aaattggaaccggggagaattgaacctaagaccttgaggaggagcacactcccaggtc-caagccaataccaccaggccaacccaagcgggtt 19553454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 33181172 - 33181247
Alignment:
Q  11 aagaagctaaattaaccc--ccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactccca 84  Q
    |||||||||||||| |||  |||||||| |||  |||| |||||||||| ||||||||||  | ||||||||||||    
T  33181172 aagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagatcttgagttggagcacactccca 33181247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 9e-18; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 125
Target Start/End: Complemental strand, 30232445 - 30232328
Alignment:
Q  10 gaagaagctaaattaaccc--ccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    |||| |||||||||| |||  |||||||||||||||||  ||| |||||| ||| | ||||| | |||||| | ||||||||||||||||||||| ||||    
T  30232445 gaagtagctaaattagcccaaccaaattggcaccggagagaatggaacctgagaccatgaggaggagcacagttccagatcgcaaaccaataccaccagg 30232346  T
Q  108 ccaactcaagtgggttta 125  Q
     |||| ||||||||||||    
T  30232345 gcaacccaagtgggttta 30232328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 15048023 - 15048138
Alignment:
Q  11 aagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggc 108  Q
    |||||| |||| ||||||||  ||||||||||| ||| ||||||||||| ||| ||||||| | |||||| ||||||||| ||| || ||||||| | ||    
T  15048023 aagaagttaaactaaccccctcaaattggcaccagagataatcgaacctgagaccttgaggaggagcacattcccagatcccaagcctataccattaagc 15048122  T
Q  109 caactcaagtgggttt 124  Q
    |||| |||||||||||    
T  15048123 caacccaagtgggttt 15048138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 125
Target Start/End: Complemental strand, 8051306 - 8051212
Alignment:
Q  31 aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggttta 125  Q
    |||||||||||||||| |||||||| | ||| || |||| |||||| ||| |||| || ||| ||||||||| ||||||||| ||||||||||||    
T  8051306 aaattggcaccggagggaatcgaacttgagacctcgaggagaagcatactgccaggtcccaagccaataccaccaggccaacccaagtgggttta 8051212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 125
Target Start/End: Complemental strand, 30311421 - 30311304
Alignment:
Q  10 gaagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    |||||||||||| ||||||||  |||||||||||  ||  |||||||||| ||| ||||||| | |||||||||||||||| ||| || ||||||  |||    
T  30311421 gaagaagctaaactaaccccctcaaattggcaccaaagagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagcctataccactagg 30311322  T
Q  108 ccaactcaagtgggttta 125  Q
    ||||| || |||||||||    
T  30311321 ccaacccaggtgggttta 30311304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 44743816 - 44743896
Alignment:
Q  10 gaagaagctaaattaaccc--ccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatc 88  Q
    |||||||||||||||||||  |||||||||||| |||| ||||||||||| ||| || |||| | ||||||||||||||||    
T  44743816 gaagaagctaaattaacccacccaaattggcactggagataatcgaacctgagacctcgaggaggagcacactcccagatc 44743896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 9557394 - 9557319
Alignment:
Q  49 atcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggttt 124  Q
    ||||||||| |||||| |||| | ||||||||| |||||| ||| ||||||| ||||||||| |||||||||||||    
T  9557394 atcgaacctgagatctcgaggaggagcacactctcagatcccaagccaatactatcaggccagctcaagtgggttt 9557319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 5499391 - 5499484
Alignment:
Q  31 aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggttt 124  Q
    ||||||||||||| |  ||| |||||||||| ||| ||| | ||||||||| |||||| |||  |||||||| ||||||||| |||||||||||    
T  5499391 aaattggcaccggggagaatagaaccttagaccttaaggaggagcacactctcagatctcaagtcaataccaccaggccaacccaagtgggttt 5499484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 10499070 - 10499186
Alignment:
Q  10 gaagaagctaaattaaccc--ccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    ||||||||||||||| |||  |||||||| || |||||  |||||||||| ||| ||  |||   |||| ||||||||||| ||| ||||||||| ||||    
T  10499070 gaagaagctaaattagcccacccaaattgacatcggagagaatcgaacctgagacctcaaggaagagcagactcccagatcccaagccaataccaccagg 10499169  T
Q  108 ccaactcaagtgggttt 124  Q
    ||||| |||||||||||    
T  10499170 ccaacccaagtgggttt 10499186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 46518743 - 46518627
Alignment:
Q  10 gaagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    |||||||||||| ||||||||  ||||||||| | |||  |||| ||||| | | ||||||| | |||||||||||||||| ||| |||||||||  | |    
T  46518743 gaagaagctaaactaaccccctcaaattggcatcagagagaatcaaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccactatg 46518644  T
Q  108 ccaactcaagtgggttt 124  Q
    ||||| |||||||||||    
T  46518643 ccaacccaagtgggttt 46518627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 123
Target Start/End: Original strand, 51903839 - 51903954
Alignment:
Q  10 gaagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    ||||||||||||||| ||| |  |||||| ||||||||  |||||||||| ||| |  |||| | |||||||||||||||| ||| ||||||||| ||||    
T  51903839 gaagaagctaaattagcccactcaaattgacaccggagagaatcgaacctgagaccacgaggaggagcacactcccagatcccaagccaataccaacagg 51903938  T
Q  108 ccaactcaagtgggtt 123  Q
     |||| || |||||||    
T  51903939 tcaacccaggtgggtt 51903954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 31520588 - 31520682
Alignment:
Q  30 caaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggttt 124  Q
    ||||||| ||| ||||  |||| ||||| ||| || |||| | |||||||||||||||| ||| ||||| ||| ||||||||| |||||||||||    
T  31520588 caaattgacactggagagaatcaaacctaagacctcgaggaggagcacactcccagatcccaagccaatgccaccaggccaacccaagtgggttt 31520682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 112
Target Start/End: Original strand, 4844472 - 4844576
Alignment:
Q  10 gaagaagctaaattaaccccca--aattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    ||||||||||||||| ||| ||  ||||||||||||||  |||||| ||| ||| || |||| | |||||||||||||||| |||  |||||||| |||     
T  4844472 gaagaagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccaga 4844571  T
Q  108 ccaac 112  Q
    |||||    
T  4844572 ccaac 4844576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 112
Target Start/End: Original strand, 4870168 - 4870272
Alignment:
Q  10 gaagaagctaaattaaccccca--aattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    ||||||||||||||| ||| ||  ||||||||||||||  |||||| ||| ||| || |||| | |||||||||||||||| |||  |||||||| |||     
T  4870168 gaagaagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccaga 4870267  T
Q  108 ccaac 112  Q
    |||||    
T  4870268 ccaac 4870272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 32651439 - 32651515
Alignment:
Q  48 aatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggttta 125  Q
    ||||||| || ||||||||||| | ||||||||||||| || ||| |||||||||  ||||||||| |||||||||||    
T  32651439 aatcgaatctgagatcttgaggaggagcacactcccaggtcccaagccaataccactaggccaact-aagtgggttta 32651515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 37788428 - 37788541
Alignment:
Q  11 aagaagctaaattaacccc-caaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggcc 109  Q
    ||||||||||||||||||| |||||||||||  |||  |||||||||| ||| ||||||| | |||||||||| || |  |||  ||||||||   ||||    
T  37788428 aagaagctaaattaacccctcaaattggcactagagagaatcgaacctgagaccttgaggaggagcacactcctaggttccaagtcaataccactgggcc 37788527  T
Q  110 aactcaagtgggtt 123  Q
    ||| ||||||||||    
T  37788528 aacccaagtgggtt 37788541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 123
Target Start/End: Complemental strand, 4222233 - 4222141
Alignment:
Q  31 aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggtt 123  Q
    |||||| |||| |||  |||||||||| |||  |||||| | |||||||||||||||| ||| |||||||||  | |||||| ||||||||||    
T  4222233 aaattgacaccagagagaatcgaacctaagactttgaggaggagcacactcccagatcccaagccaataccactaagccaacccaagtgggtt 4222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 16891383 - 16891454
Alignment:
Q  48 aatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgg 120  Q
    |||||||||| ||| ||||||| ||| |||||| ||||||| ||| ||||||| ||||||| |||||||||||    
T  16891383 aatcgaacctgaga-cttgaggagaaacacacttccagatctcaagccaatactatcaggctaactcaagtgg 16891454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 123
Target Start/End: Complemental strand, 3055065 - 3054994
Alignment:
Q  52 gaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggtt 123  Q
    |||||| ||||||||||| ||||||| |||| || || ||| |||| |||| ||||||||| ||||||||||    
T  3055065 gaacctgagatcttgaggagaagcacgctccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 3054994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 5166541 - 5166442
Alignment:
Q  10 gaagaagctaaattaacc--cccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    ||||||||||||||| ||  || || ||||||||||||  |||||||||| ||||||||||| | |||||||||| || || |||| ||| |||||| ||    
T  5166541 gaagaagctaaattagccaacctaacttggcaccggag--aatcgaacctgagatcttgaggagcagcacactccaaggtctcaaatcaacaccatcggg 5166444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 27093323 - 27093438
Alignment:
Q  10 gaagaagctaaattaacccc-caaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggc 108  Q
    ||||||| |||| ||||||  |||||||||||| |||  |||| ||||| ||| ||||||| | ||||||||||||  |  ||| |||||||||  ||||    
T  27093323 gaagaagataaactaacccttcaaattggcaccagagagaatcaaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggc 27093422  T
Q  109 caactcaagtgggttt 124  Q
    |||| |||||||||||    
T  27093423 caacccaagtgggttt 27093438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 47236952 - 47237035
Alignment:
Q  28 cccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaa 111  Q
    |||||||||||||||| |  |||||||| | ||| ||||| | | ||||||||||| | || ||||||||||||| ||||||||    
T  47236952 cccaaattggcaccggggagaatcgaacatgagaccttgaagaggagcacactcccgggtcccaaaccaataccaccaggccaa 47237035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 112
Target Start/End: Complemental strand, 2667938 - 2667873
Alignment:
Q  47 taatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaac 112  Q
    ||||||||||| ||| || ||||   |||||||||||||||| ||| ||||||||| |||||||||    
T  2667938 taatcgaacctgagacctcgaggaagagcacactcccagatcccaagccaataccaccaggccaac 2667873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 123
Target Start/End: Original strand, 16354855 - 16354968
Alignment:
Q  10 gaagaagctaaattaacccccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggcc 109  Q
    |||||||||||| || |||  || |||||||| |||  |||||||||| ||| | ||||| | ||||||||| ||| |  ||| |||||||||  |||||    
T  16354855 gaagaagctaaactaccccttaatttggcaccagagagaatcgaacctgagaccctgaggaggagcacactcacaggttccaagccaataccactaggcc 16354954  T
Q  110 aactcaagtgggtt 123  Q
    ||| ||||||||||    
T  16354955 aacccaagtgggtt 16354968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 36720456 - 36720379
Alignment:
Q  48 aatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggttta 125  Q
    |||||||||| | | || |||| | |||||||||||| ||| ||| ||||||||| ||| ||||| ||||||||||||    
T  36720456 aatcgaacctgaaacctcgaggaggagcacactcccatatcccaagccaataccaccagaccaacccaagtgggttta 36720379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 20501810 - 20501738
Alignment:
Q  10 gaagaagctaaattaacccc-caaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactc 81  Q
    ||||||||||||||| |||| ||||||||||| ||||  |||||||||| ||| ||| ||| | |||||||||    
T  20501810 gaagaagctaaattagcccctcaaattggcactggagagaatcgaacctgagaccttaaggaggagcacactc 20501738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 28703366 - 28703445
Alignment:
Q  11 aagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatc 88  Q
    ||||||||||| ||||| ||  ||||||||||| |||  |||||||||| ||| ||||| | | ||||||||||||||||    
T  28703366 aagaagctaaactaacctcctcaaattggcaccagagagaatcgaacctgagaccttgaagaggagcacactcccagatc 28703445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 94935 - 95044
Alignment:
Q  11 aagaagctaaattaacccccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggcca 110  Q
    ||||||||||| ||||||  ||||||||||| ||| |||| |||||| ||| ||||||| | ||||||||||||| |  ||| |||||||||  ||||||    
T  94935 aagaagctaaactaacccttaaattggcaccagagataattgaacctgagaccttgaggaggagcacactcccaggttccaagccaataccactaggcca 95034  T
Q  111 actcaagtgg 120  Q
    || |||||||    
T  95035 acccaagtgg 95044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 31 - 120
Target Start/End: Complemental strand, 21086806 - 21086717
Alignment:
Q  31 aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgg 120  Q
    |||||| |||| ||| |||||||| || ||||||||||| | |||||||| |||||||  ||| |||||||||||| |||||||||||||    
T  21086806 aaattgacaccagagataatcgaatctgagatcttgaggaggagcacactgccagatcctaaatcaataccatcagaccaactcaagtgg 21086717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 123
Target Start/End: Original strand, 8278236 - 8278351
Alignment:
Q  10 gaagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    ||||||||||||||| ||| |  |||| |||||||||| ||||| ||| | |||||| |||| | ||||||||||||  || ||| |||||||||||||     
T  8278236 gaagaagctaaattagcccacctaaatcggcaccggagataatcaaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccatcaga 8278335  T
Q  108 ccaactcaagtgggtt 123  Q
    ||||| ||||||||||    
T  8278336 ccaacccaagtgggtt 8278351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 123
Target Start/End: Complemental strand, 29075896 - 29075781
Alignment:
Q  10 gaagaagctaaattaaccc--ccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    ||||||||||||||| |||  | ||||||||||| |||  |||||||| | |||||| |||| | |||||||||||||||| ||| |||||||||  |||    
T  29075896 gaagaagctaaattagcccatctaaattggcaccagagagaatcgaacatgagatctcgaggaggagcacactcccagatcccaagccaataccactagg 29075797  T
Q  108 ccaactcaagtgggtt 123  Q
    | ||| ||||||||||    
T  29075796 caaacccaagtgggtt 29075781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 123
Target Start/End: Complemental strand, 25627171 - 25627057
Alignment:
Q  10 gaagaagctaaattaacccc-caaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggc 108  Q
    |||||||||||| ||||||| ||||||| |||| |||  |||||||||| ||| ||||||| | ||||||||||||  |  ||| |||||||||  ||||    
T  25627171 gaagaagctaaactaacccctcaaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggc 25627072  T
Q  109 caactcaagtgggtt 123  Q
    |||| ||||||||||    
T  25627071 caacccaagtgggtt 25627057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 123
Target Start/End: Complemental strand, 16773922 - 16773807
Alignment:
Q  10 gaagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    ||||||||||||||| ||| |  ||||||||| | |||  |||||||||| ||| || |||| | ||||||||||||| || |||  |||||||| |||     
T  16773922 gaagaagctaaattagcccacctaaattggcatcagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccaga 16773823  T
Q  108 ccaactcaagtgggtt 123  Q
    ||||||||||||||||    
T  16773822 ccaactcaagtgggtt 16773807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 31 - 123
Target Start/End: Complemental strand, 21589380 - 21589288
Alignment:
Q  31 aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggtt 123  Q
    ||||||||||| |||| |||||||||| |||  | |||| | |||| |||||||| || ||| ||||||||| ||||||||| ||||||||||    
T  21589380 aaattggcaccagagggaatcgaacctgagacatcgaggagtagcagactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 21589288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 43442311 - 43442217
Alignment:
Q  10 gaagaagctaaattaaccc--ccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaatacca 102  Q
    |||||| |||||||| |||  |||||||| || | |||  |||||||||| ||| ||||||| | |||||||||||||||| |||||||||||||    
T  43442311 gaagaaactaaattagcccatccaaattgacaacagagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaaaccaatacca 43442217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 123
Target Start/End: Original strand, 21549099 - 21549213
Alignment:
Q  10 gaagaagctaaattaacccc-caaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggc 108  Q
    |||||||||||| ||||||| |||||||||||  |||  |||||||| | |||  || ||| | ||||||||||||| || ||| |||||||||  ||||    
T  21549099 gaagaagctaaactaacccctcaaattggcactagagaaaatcgaacttgagactttaaggaggagcacactcccaggtcccaagccaataccactaggc 21549198  T
Q  109 caactcaagtgggtt 123  Q
    |||| ||||||||||    
T  21549199 caacccaagtgggtt 21549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 26078034 - 26078128
Alignment:
Q  30 caaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggttt 124  Q
    |||||||||||  |||  |||||||||| ||| ||||| | |||||| |||||||  || |||||||||||||  |||||||| |||||||||||    
T  26078034 caaattggcactagagagaatcgaacctgagaccttgaagagaagcatactcccaagtcccaaaccaataccactaggccaacccaagtgggttt 26078128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 125
Target Start/End: Original strand, 30109270 - 30109386
Alignment:
Q  10 gaagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    ||||||||||||||| ||| |  ||||| ||||||| || |||||||||| ||| ||  ||| | ||||||||||||| || ||| ||||||||| || |    
T  30109270 gaagaagctaaattagcccacctaaattagcaccggggg-aatcgaacctgagacctcaaggaggagcacactcccaggtcacaagccaataccaccaag 30109368  T
Q  108 ccaactcaagtgggttta 125  Q
    ||||| ||||||||||||    
T  30109369 ccaacccaagtgggttta 30109386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 34984899 - 34984805
Alignment:
Q  30 caaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggttt 124  Q
    |||||||||||| |||  |||||||||| ||| ||||||| | ||||||||||||| |  ||| |||||||||  || ||||| |||||||||||    
T  34984899 caaattggcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgggttt 34984805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 123
Target Start/End: Original strand, 7918430 - 7918545
Alignment:
Q  10 gaagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    |||||||||||| ||| ||||  ||||||||||| |||  |||||||||| ||| ||||||| | ||  ||||||||| |  ||| |||||||||  |||    
T  7918430 gaagaagctaaactaaacccctcaaattggcaccagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactagg 7918529  T
Q  108 ccaactcaagtgggtt 123  Q
    ||||| ||||||||||    
T  7918530 ccaacccaagtgggtt 7918545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 29692367 - 29692463
Alignment:
Q  28 cccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggttt 124  Q
    |||||||||||| |||||  |||  ||||| |||  |||||| | |||||||||||||||| ||| ||||||||| ||| ||||| ||| |||||||    
T  29692367 cccaaattggcatcggagagaattaaacctgagactttgaggaggagcacactcccagatcccaatccaataccaccagaccaacccaaatgggttt 29692463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 18595966 - 18596056
Alignment:
Q  14 aagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaatacca 102  Q
    |||||||| ||||||||  ||||||||||| |||  |||||||||| ||| ||||||| | |||||| |||||| || ||| |||||||||    
T  18595966 aagctaaactaaccccctcaaattggcaccagagaaaatcgaacctaagaccttgaggaggagcacattcccaggtcacaagccaatacca 18596056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 125
Target Start/End: Complemental strand, 36497704 - 36497673
Alignment:
Q  94 ccaataccatcaggccaactcaagtgggttta 125  Q
    ||||||||||||||||||||||||||||||||    
T  36497704 ccaataccatcaggccaactcaagtgggttta 36497673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 14285254 - 14285160
Alignment:
Q  30 caaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggttt 124  Q
    |||||||||||| |||  |||||||||| ||| ||||||| | ||||||||||||| |  ||| ||||| |||   ||||||| |||||||||||    
T  14285254 caaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggttccaagccaattccactcggccaacccaagtgggttt 14285160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 120
Target Start/End: Complemental strand, 12877808 - 12877696
Alignment:
Q  10 gaagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    ||||||||||||||| ||| |  ||||| | ||| |||  |||||||||| |||  |||||| ||| |||||||||| ||| ||||||||| |||  ||     
T  12877808 gaagaagctaaattagcccacctaaattagtaccagagagaatcgaacctgagacattgaggagaaacacactcccaaatcccaaaccaatgccactaga 12877709  T
Q  108 ccaactcaagtgg 120  Q
    |||||||||||||    
T  12877708 ccaactcaagtgg 12877696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 16457903 - 16457810
Alignment:
Q  30 caaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggtt 123  Q
    |||||||||||||| |  ||| |||| | ||| ||||||| | |||||||||| || || ||| ||||||||| |||||||||  |||||||||    
T  16457903 caaattggcaccggggagaattgaacatgagaccttgaggaggagcacactccaaggtcccaagccaataccaccaggccaacctaagtgggtt 16457810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 123
Target Start/End: Complemental strand, 6844821 - 6844729
Alignment:
Q  31 aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggtt 123  Q
    ||||||||||  ||| ||||||||||||||| || |||| | | |||||||||| ||  |||  |||||||| | ||||||| ||||||||||    
T  6844821 aaattggcacgagagataatcgaaccttagacctcgaggaggaacacactcccaaattccaagtcaataccacctggccaacccaagtgggtt 6844729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 123
Target Start/End: Complemental strand, 22661329 - 22661214
Alignment:
Q  10 gaagaagctaaattaaccc--ccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    ||||||||||||||||| |  ||||||| ||| |||||  ||| |||||| ||||||||||| |  | | |||| |||||| |||  ||||| |||||||    
T  22661329 gaagaagctaaattaactcacccaaattagcatcggagaaaattgaacctgagatcttgaggtggggtatactctcagatcccaagtcaatatcatcagg 22661230  T
Q  108 ccaactcaagtgggtt 123  Q
    | ||| ||||||||||    
T  22661229 ctaacccaagtgggtt 22661214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 12188264 - 12188380
Alignment:
Q  10 gaagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    |||||||||||| ||||||||  ||||||||||  |||  |||||||| | | | ||||||| | ||||||||||||| || ||| |||||||||  |||    
T  12188264 gaagaagctaaactaaccccctcaaattggcactagagagaatcgaacttgaaaccttgaggaggagcacactcccaggtcccaagccaataccactagg 12188363  T
Q  108 ccaactcaagtgggttt 124  Q
    ||||| |||||||||||    
T  12188364 ccaacccaagtgggttt 12188380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 123
Target Start/End: Complemental strand, 30127512 - 30127400
Alignment:
Q  13 gaagctaaattaacc--cccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggcca 110  Q
    |||||||||||||||  || ||||||||||||||   |||||||||| ||| || || | | |||||||||||||| | ||| ||||||||| ||| |||    
T  30127512 gaagctaaattaacctacctaaattggcaccggaaagaatcgaacctgagacctcgaagaggagcacactcccagaccccaagccaataccaccagacca 30127413  T
Q  111 actcaagtgggtt 123  Q
    || ||||||||||    
T  30127412 acccaagtgggtt 30127400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 125
Target Start/End: Original strand, 31622952 - 31623069
Alignment:
Q  10 gaagaagctaaattaaccc--ccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    ||||||||||||||| |||  |||||||| ||||||||  | || ||||| ||| || |||| | ||||||||||||| || ||| ||||||||| | |     
T  31622952 gaagaagctaaattagcccacccaaattgacaccggagtgattcaaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccgga 31623051  T
Q  108 ccaactcaagtgggttta 125  Q
    ||||| ||||||||||||    
T  31623052 ccaacccaagtgggttta 31623069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 12234469 - 12234585
Alignment:
Q  11 aagaagctaaattaaccc--ccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggc 108  Q
    |||||||||||||| |||  | |||||| ||| ||||  |||||||||| ||| || ||| || ||||||||||||| || |||  |||||||| |||||    
T  12234469 aagaagctaaattatcccatctaaattgacactggagagaatcgaacctgagacctcgagagggagcacactcccaggtcccaagtcaataccaccaggc 12234568  T
Q  109 caactcaagtgggttta 125  Q
    ||||  |||||||||||    
T  12234569 caacctaagtgggttta 12234585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 28364031 - 28363958
Alignment:
Q  29 ccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaatacca 102  Q
    |||||||| |||| ||| |||||||| || ||| ||||||| | ||||||||| |||||| |||||||||||||    
T  28364031 ccaaattgacaccagagataatcgaatctgagaccttgaggaggagcacactcgcagatcccaaaccaatacca 28363958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 33549196 - 33549103
Alignment:
Q  31 aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggttt 124  Q
    ||||||||| | |||  |||||||||| ||| || |||| | ||||||||||||| || ||| ||||||||| ||| ||||| |||||||||||    
T  33549196 aaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggttt 33549103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 24555793 - 24555740
Alignment:
Q  49 atcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaatacca 102  Q
    ||||||||| ||||||||||| | |||| ||||| ||||| |||||||||||||    
T  24555793 atcgaacctgagatcttgaggaggagcatactccgagatctcaaaccaatacca 24555740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 32613141 - 32613214
Alignment:
Q  48 aatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtggg 121  Q
    |||||||| | ||||||||||  | |||||||||||||| | |||  |||||||| ||||||||| ||||||||    
T  32613141 aatcgaacatgagatcttgagaaggagcacactcccagaccccaagtcaataccaccaggccaacccaagtggg 32613214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 123
Target Start/End: Original strand, 15284 - 15399
Alignment:
Q  10 gaagaagctaaattaaccccc--aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcagg 107  Q
    ||||||||||||||| ||| |  ||||||||| | |||  |||||||||| ||| || |||| | ||||||||||||| || ||| ||||||||| |||     
T  15284 gaagaagctaaattagcccacctaaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccaga 15383  T
Q  108 ccaactcaagtgggtt 123  Q
    ||||| ||||||||||    
T  15384 ccaacccaagtgggtt 15399  T

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Target: scaffold0194 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 13027 - 13111
Alignment:
Q  28 cccaaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaac 112  Q
    ||||||||| || |||||  |||||||||| ||| ||||||| | |||||||||||||||| ||| ||||||||| || ||||||    
T  13027 cccaaattgacatcggagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagccaataccaccaagccaac 13111  T

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Target: scaffold0417 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 77 - 124
Target Start/End: Complemental strand, 10265 - 10218
Alignment:
Q  77 cactcccagatcgcaaaccaataccatcaggccaactcaagtgggttt 124  Q
    |||||||||||| ||| |||||| |||||||||||| |||||||||||    
T  10265 cactcccagatcccaagccaatatcatcaggccaacccaagtgggttt 10218  T

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Target: scaffold0291 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 48 - 123
Target Start/End: Original strand, 2471 - 2546
Alignment:
Q  48 aatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggtt 123  Q
    |||||||||| ||| ||||||| | ||||||||||||||||  |||||||||||| | | ||||| ||| ||||||    
T  2471 aatcgaacctgagaccttgaggaggagcacactcccagatccaaaaccaataccaccggaccaacccaaatgggtt 2546  T

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Target: scaffold0299 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 110
Target Start/End: Complemental strand, 11603 - 11541
Alignment:
Q  48 aatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggcca 110  Q
    |||||||||| ||| || |||| | |||||||||||||||| ||| ||||||||| |||||||    
T  11603 aatcgaacctgagacctcgaggaggagcacactcccagatcccaagccaataccaccaggcca 11541  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 123
Target Start/End: Original strand, 19873 - 19923
Alignment:
Q  73 agcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggtt 123  Q
    |||| ||||||||||| ||| |||||||||||| ||||| |||||||||||    
T  19873 agcagactcccagatcccaagccaataccatcatgccaattcaagtgggtt 19923  T

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Target: scaffold0032 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 123
Target Start/End: Complemental strand, 112374 - 112282
Alignment:
Q  31 aaattggcaccggaggtaatcgaaccttagatcttgaggggaagcacactcccagatcgcaaaccaataccatcaggccaactcaagtgggtt 123  Q
    |||||||||||||||  |||||||||| ||| ||  | | | | |||||||||||||  ||| ||||||| | ||||||||| ||||||||||    
T  112374 aaattggcaccggagagaatcgaacctcagacctcaaagaggaccacactcccagattccaagccaatacaaccaggccaacccaagtgggtt 112282  T

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