View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10666_low_11 (Length: 318)
Name: NF10666_low_11
Description: NF10666
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10666_low_11 |
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Alignment Details
Target: chr2 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 49 - 313
Target Start/End: Original strand, 5159116 - 5159381
Alignment:
| Q |
49 |
ggacgatacttatagtactaacttatttcacttgttctctttgatttgtt-taaaaatacaaaaaagtatactagcttttttctggtgtatccttaagta |
147 |
Q |
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| T |
5159116 |
ggacgatacttatagtactaacttgtttcatttgttctctttgattttttgtaaaaatacaaaaaagtatactagcttttttctggtgtatccttaagta |
5159215 |
T |
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| Q |
148 |
aacacaaactcaattgagattttcacgagaataaagttgtttagcaactccttaattaacagttaacataaacaaatacatatactacttgatgtcaatg |
247 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5159216 |
aacacaaactcaattgagattttcacgagaataaagttgtttagcaactccttaattaacagttaacataaacaaatacatatactacttgatgtcaatg |
5159315 |
T |
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| Q |
248 |
ttatgaaaccgtgattcacaagacactgttaagtgttgtatttgaggttcttgttcctttgcttct |
313 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
5159316 |
ttatgaaaccgtgattcacaagacactgttaagtgttgtatttgaggttcttgttcctttgtttct |
5159381 |
T |
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