View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10666_low_25 (Length: 241)
Name: NF10666_low_25
Description: NF10666
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10666_low_25 |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 130; Significance: 2e-67; HSPs: 17)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 5 - 190
Target Start/End: Original strand, 30435080 - 30435265
Alignment:
| Q |
5 |
agttttttcagagatggtagtttactaagtgacggaagccgcacaatttcgttgcaattccaaagttgaagagaaattaaattactaagaataatcatcc |
104 |
Q |
| |
|
|||||||| |||||||||||||||| || | |||||||||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
30435080 |
agtttttttagagatggtagtttaccaaataacggaagccgcacaattttgttgcaatccccaagtttaagagaaattaaattactaagaataattatcc |
30435179 |
T |
 |
| Q |
105 |
aacttggtaacgataatccttcatagcaatttatatccaagcacttgagatttgagtgaggttgaagaacttcaagtacttgctca |
190 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||| |
|
|
| T |
30435180 |
aacttggtaacgataatccgtcatagcaatttatatccaagcacttgagatttgagtgaggttgaagctcttcgagtaattgctca |
30435265 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 5 - 198
Target Start/End: Original strand, 30748901 - 30749094
Alignment:
| Q |
5 |
agttttttcagagatggtagtttactaagtgacggaagccgcacaatttcgttgcaattccaaagttgaagagaaattaaattactaagaataatcatcc |
104 |
Q |
| |
|
|||||||| |||||||||||||||| |||| |||||||||||||||||| ||||||| || ||||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
30748901 |
agtttttttagagatggtagtttaccaagtaacggaagccgcacaattttgttgcaaatctcaagttcaagagaaattaaattactaagaataattatcc |
30749000 |
T |
 |
| Q |
105 |
aacttggtaacgataatccttcatagcaatttatatccaagcacttgagatttgagtgaggttgaagaacttcaagtacttgctcaacactaac |
198 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
30749001 |
aacttggtaacgataatccttcatagtaatttattgtcaagcatttgagatttgagtgaggttgaagcacttcaagtacttgctcagcactaac |
30749094 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 30243221 - 30243025
Alignment:
| Q |
1 |
ttccagttttttcagagatggtagtttactaagtgacggaagccgcacaatttcgttgcaattccaaagttgaagagaaattaaattactaagaataatc |
100 |
Q |
| |
|
|||||||||||| ||| |||||||||||| |||| |||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||| ||| |
|
|
| T |
30243221 |
ttccagtttttttagatatggtagtttaccaagtaacggaagccgcacaattttgttgcaattccgaagttcaagagaaattaaattactaagaagaatt |
30243122 |
T |
 |
| Q |
101 |
atccaacttggtaacgataatccttcatagcaatttatatccaagcacttgagatttgagtgaggttgaagaacttcaagtacttgctcaacactaa |
197 |
Q |
| |
|
|||||||||||||| |||||||| |||||| || |||| | |||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |
|
|
| T |
30243121 |
atccaacttggtaaggataatccctcatagaaacttattttcaagcacttgagatttgagtgaggttgaagcacttcaagtacttgctcagcactaa |
30243025 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 4 - 224
Target Start/End: Complemental strand, 30714280 - 30714060
Alignment:
| Q |
4 |
cagttttttcagagatggtagtttactaagtgacggaagccgcacaatttcgttgcaattccaaagttgaagagaaattaaattactaagaataatcatc |
103 |
Q |
| |
|
||||||||| |||||||||||||||| |||| |||||||||||||||||| ||||||| |||| |||||||| |||||||||||||||||| ||| |
|
|
| T |
30714280 |
cagtttttttagagatggtagtttaccaagtaacggaagccgcacaattttcttgcaatggagaagtacaagagaaactaaattactaagaataattatc |
30714181 |
T |
 |
| Q |
104 |
caacttggtaacgataatccttcatagcaatttatatccaagcacttgagatttgagtgaggttgaagaacttcaagtacttgctcaacactaacaacag |
203 |
Q |
| |
|
||||||||||| ||||||||||||||| ||||||| |||||| ||||||||||||||||||||||| |||| |||||||||||| |||||||||||| |
|
|
| T |
30714180 |
caacttggtaatgataatccttcatagtaatttattgtcaagcatttgagatttgagtgaggttgaagctcttcgagtacttgctcagcactaacaacag |
30714081 |
T |
 |
| Q |
204 |
gggtttttggaattccttgtt |
224 |
Q |
| |
|
|||| |||||||||||||||| |
|
|
| T |
30714080 |
gggtctttggaattccttgtt |
30714060 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 29871440 - 29871636
Alignment:
| Q |
1 |
ttccagttttttcagagatggtagtttactaagtgacggaagccgcacaatttcgttgcaattccaaagttgaagagaaattaaattactaagaataatc |
100 |
Q |
| |
|
|||||||||||| |||||||||||||||| |||| |||||||||||||||| | |||||||| | ||||| ||||||||||||||||||||||||||| |
|
|
| T |
29871440 |
ttccagtttttttagagatggtagtttaccaagtaacggaagccgcacaatcttgttgcaatcctcaagtttaagagaaattaaattactaagaataatt |
29871539 |
T |
 |
| Q |
101 |
atccaacttggtaacgataatccttcatagcaatttatatccaagcacttgagatttgagtgaggttgaagaacttcaagtacttgctcaacactaa |
197 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||| |||| |||||||||||| |||||| |
|
|
| T |
29871540 |
atccaacttggtaacgataatccttcatagtaatttattgtcaagcatttgagatttgagtgaggttgaagctcttcgagtacttgctcagcactaa |
29871636 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 30482658 - 30482854
Alignment:
| Q |
1 |
ttccagttttttcagagatggtagtttactaagtgacggaagccgcacaatttcgttgcaattccaaagttgaagagaaattaaattactaagaataatc |
100 |
Q |
| |
|
|||||||||||| |||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||| | |
|
|
| T |
30482658 |
ttccagtttttttagagatggtagtttaccaagtaacggaagccgcacaattttgttgcaattccgaagttcaagagaaattaaattactaagaaggctt |
30482757 |
T |
 |
| Q |
101 |
atccaacttggtaacgataatccttcatagcaatttatatccaagcacttgagatttgagtgaggttgaagaacttcaagtacttgctcaacactaa |
197 |
Q |
| |
|
|||||||||||||||||||| ||||||| | ||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
30482758 |
atccaacttggtaacgataacccttcattgtaatttattgtcaagcatttgagatttgagtgaggttgaagctcttcaagtacttgctcagcactaa |
30482854 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 8 - 190
Target Start/End: Original strand, 29852560 - 29852742
Alignment:
| Q |
8 |
tttttcagagatggtagtttactaagtgacggaagccgcacaatttcgttgcaattccaaagttgaagagaaattaaattactaagaataatcatccaac |
107 |
Q |
| |
|
||||| ||| |||||||||||| |||| |||||||||||||||||| ||||||||||| ||||| ||||||||||||| ||||||||| | ||||||| |
|
|
| T |
29852560 |
ttttttagatatggtagtttacaaagtaacggaagccgcacaattttgttgcaattccgaagttcaagagaaattaaactactaagaaggcttatccaac |
29852659 |
T |
 |
| Q |
108 |
ttggtaacgataatccttcatagcaatttatatccaagcacttgagatttgagtgaggttgaagaacttcaagtacttgctca |
190 |
Q |
| |
|
||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
29852660 |
ttggtaacgataatccttcatagtaatttatgtccaagcacttgagatttgagtgaggttgaagctcttcgagtacttgctca |
29852742 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 30059611 - 30059834
Alignment:
| Q |
1 |
ttccagttttttcagagatggtagtttactaagtgacggaagccgcacaatttcgttgcaattccaaagttgaagagaaattaaattactaagaataatc |
100 |
Q |
| |
|
|||||| ||||| | |||||||||| ||| |||| || |||||||||||| || || ||| | ||||| |||||||| |||||||||||||||||| |
|
|
| T |
30059611 |
ttccaggttttttaaagatggtagtataccaagtaactgaagccgcacaactttcttacaacgcttaagtttaagagaaactaaattactaagaataatt |
30059710 |
T |
 |
| Q |
101 |
atccaacttggtaacgataatccttcatagcaatttatatccaagcacttgagatttgagtgaggttgaagaacttcaagtacttgctcaacactaacaa |
200 |
Q |
| |
|
||||||||||| || |||||||| |||||| || |||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30059711 |
atccaacttggcaaggataatccctcatagaaacttattttcaagcagttgagatttgagtgaggttgaagaacttcaagtacttgctcaacactaacaa |
30059810 |
T |
 |
| Q |
201 |
caggggtttttggaattccttgtt |
224 |
Q |
| |
|
||||| | |||||||||||||||| |
|
|
| T |
30059811 |
cagggttctttggaattccttgtt |
30059834 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 4 - 198
Target Start/End: Complemental strand, 30678014 - 30677820
Alignment:
| Q |
4 |
cagttttttcagagatggtagtttactaagtgacggaagccgcacaatttcgttgcaattccaaagttgaagagaaattaaattactaagaataatcatc |
103 |
Q |
| |
|
|||| |||| |||||||||||||||| | || |||||||||||||||||| |||||| | | ||||| ||||||||||||||||||||||||||| ||| |
|
|
| T |
30678014 |
cagtctttttagagatggtagtttaccacgtaacggaagccgcacaattttgttgcattcctcaagttcaagagaaattaaattactaagaataattatc |
30677915 |
T |
 |
| Q |
104 |
caacttggtaacgataatccttcatagcaatttatatccaagcacttgagatttgagtgaggttgaagaacttcaagtacttgctcaacactaac |
198 |
Q |
| |
|
||||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||||||||| ||| |||||||||||||||||| ||||||| |
|
|
| T |
30677914 |
caacttggtaacgataatctttcatagtaatttattgtcaagcatttgagatttgagtgaggtttaagcacttcaagtacttgctcagcactaac |
30677820 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 30399319 - 30399515
Alignment:
| Q |
1 |
ttccagttttttcagagatggtagtttactaagtgacggaagccgcacaatttcgttgcaattccaaagttgaagagaaattaaattactaagaataatc |
100 |
Q |
| |
|
|||||||||||| ||||| |||||||||| || | || |||| ||||||| || |||||||||| ||||| |||||||| |||||||||||||||||| |
|
|
| T |
30399319 |
ttccagtttttttagagacggtagtttaccaattaactgaagtcgcacaactttcttgcaattcccaagttcaagagaaactaaattactaagaataatt |
30399418 |
T |
 |
| Q |
101 |
atccaacttggtaacgataatccttcatagcaatttatatccaagcacttgagatttgagtgaggttgaagaacttcaagtacttgctcaacactaa |
197 |
Q |
| |
|
|||||||||||||| |||||||| |||||| ||||||| | |||||||||||||||||||||||||||||| ||||| |||||||||| | |||||| |
|
|
| T |
30399419 |
atccaacttggtaatgataatccgtcatagtaatttattttcaagcacttgagatttgagtgaggttgaagcacttcgagtacttgctgagcactaa |
30399515 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 8 - 197
Target Start/End: Complemental strand, 30339367 - 30339178
Alignment:
| Q |
8 |
tttttcagagatggtagtttactaagtgacggaagccgcacaatttcgttgcaattccaaagttgaagagaaattaaattactaagaataatcatccaac |
107 |
Q |
| |
|
||||| |||||||||||||||| |||| || ||||| ||||||||| ||||||||||||||| | ||||||||||||||||||||||| | ||||||| |
|
|
| T |
30339367 |
ttttttagagatggtagtttaccaagtaactgaagcagcacaattttgttgcaattccaaagattaagagaaattaaattactaagaaggcttatccaac |
30339268 |
T |
 |
| Q |
108 |
ttggtaacgataatccttcatagcaatttatatccaagcacttgagatttgagtgaggttgaagaacttcaagtacttgctcaacactaa |
197 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||| | ||||||||||||||||||||||| |||| || ||||||||| |||||| |
|
|
| T |
30339267 |
ttggtaacgataatccttcatagaaatttactgtcaaggaattgagatttgagtgaggttgaagctcttcgagcacttgctcagcactaa |
30339178 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 82 - 212
Target Start/End: Complemental strand, 17418937 - 17418807
Alignment:
| Q |
82 |
taaattactaagaataatcatccaacttggtaacgataatccttcatagcaatttatatccaagcacttgagatttgagtgaggttgaagaacttcaagt |
181 |
Q |
| |
|
|||||||||||||||| | ||||||||||||||| ||| ||| |||||| || |||| | |||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
17418937 |
taaattactaagaatacttatccaacttggtaacaatattccatcatagtaagttattttcaagcacttgagatttgagtgaggttgaagcacttcaagt |
17418838 |
T |
 |
| Q |
182 |
acttgctcaacactaacaacaggggtttttg |
212 |
Q |
| |
|
| ||||||| ||||||||| |||||| |||| |
|
|
| T |
17418837 |
agttgctcagcactaacaataggggtctttg |
17418807 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 197
Target Start/End: Original strand, 30205771 - 30205963
Alignment:
| Q |
5 |
agttttttcagagatggtagtttactaagtgacggaagccgcaca-atttcgttgcaattccaaagttgaagagaaattaaattactaagaataatcatc |
103 |
Q |
| |
|
|||||||||| |||| ||||||||| || |||||||||||||||| ||||| | |||||||||||| ||||| || ||||||||| |||||| | ||| |
|
|
| T |
30205771 |
agttttttcaaagattgtagtttaccaaatgacggaagccgcacacatttc-tcacaattccaaagtacaagagcaactaaattactgagaatacttatc |
30205869 |
T |
 |
| Q |
104 |
caacttggtaacgataatccttcatag---caatttatatccaagcacttgagatttgagtgaggttgaagaacttcaagtacttgctcaacactaa |
197 |
Q |
| |
|
||||||||||| |||||| | |||| ||| |||| ||| | |||||||||||||||||||||||| ||||||| || |||||||| ||||| |
|
|
| T |
30205870 |
caacttggtaagaataatctgttatagtgacaaattat---caacctcttgagatttgagtgaggttgaagcacttcaaatagttgctcaaaactaa |
30205963 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 4380912 - 4381003
Alignment:
| Q |
1 |
ttccagttttttcagagatggtagtttactaagtgacggaagccgcacaatttcgttgcaattccaaagttgaagagaaattaaattactaa |
92 |
Q |
| |
|
||||| |||||| ||||||| |||||||| |||||||||||||||||||| || ||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
4380912 |
ttccaatttttttagagatgttagtttaccaagtgacggaagccgcacaactttgttgcaaacacaaagtttaagagaaattaaattactaa |
4381003 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 190
Target Start/End: Original strand, 30474773 - 30474815
Alignment:
| Q |
148 |
cttgagatttgagtgaggttgaagaacttcaagtacttgctca |
190 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||||||||||| |
|
|
| T |
30474773 |
cttgagatttgagtgaggttgaagcatttcaagtacttgctca |
30474815 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 182
Target Start/End: Complemental strand, 30522362 - 30522299
Alignment:
| Q |
119 |
aatccttcatagcaatttatatccaagcacttgagatttgagtgaggttgaagaacttcaagta |
182 |
Q |
| |
|
||||| ||||||| || ||| | |||| |||||||||||||||||||||||| |||||||||| |
|
|
| T |
30522362 |
aatccgtcatagccatgtattttcaagatcttgagatttgagtgaggttgaagcacttcaagta |
30522299 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 182
Target Start/End: Complemental strand, 30562702 - 30562639
Alignment:
| Q |
119 |
aatccttcatagcaatttatatccaagcacttgagatttgagtgaggttgaagaacttcaagta |
182 |
Q |
| |
|
||||| ||||||| || ||| | |||| |||||||||||||||||||||||| |||||||||| |
|
|
| T |
30562702 |
aatccgtcatagccatgtattttcaagatcttgagatttgagtgaggttgaagcacttcaagta |
30562639 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 4 - 195
Target Start/End: Complemental strand, 20297449 - 20297258
Alignment:
| Q |
4 |
cagttttttcagagatggtagtttactaagtgacggaagccgcacaatttcgttgcaattccaaagttgaagagaaattaaattactaagaataatcatc |
103 |
Q |
| |
|
||||||||| |||||||||||||||| || | |||||||| |||||||||||||||||||| ||||| || ||||| |||||||||||||||||| ||| |
|
|
| T |
20297449 |
cagtttttttagagatggtagtttaccaattaacggaagctgcacaatttcgttgcaattctcaagttcaaaagaaactaaattactaagaataattatc |
20297350 |
T |
 |
| Q |
104 |
caacttggtaacgataatccttcatagcaatttatatccaagcacttgagatttgagtgaggttgaagaacttcaagtacttgctcaacact |
195 |
Q |
| |
|
|||||||||||| | ||||| |||||||||||||| |||||||||||||||||||| ||||||||||| ||||| ||||||| |||| |||| |
|
|
| T |
20297349 |
caacttggtaaccacaatccatcatagcaatttatttccaagcacttgagatttgactgaggttgaagcacttcgagtactttctcagcact |
20297258 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 26706586 - 26706782
Alignment:
| Q |
1 |
ttccagttttttcagagatggtagtttactaagtgacggaagccgcacaatttcgttgcaattccaaagttgaagagaaattaaattactaagaataatc |
100 |
Q |
| |
|
||||||||||| |||||||||||||||| |||| ||||||||||||||| || ||||||| || ||||| |||||||| |||||||||||||||| | |
|
|
| T |
26706586 |
ttccagtttttctagagatggtagtttaccaagtaacggaagccgcacaaatttcttgcaatccccaagttcaagagaaactaaattactaagaatactt |
26706685 |
T |
 |
| Q |
101 |
atccaacttggtaacgataatccttcatagcaatttatatccaagcacttgagatttgagtgaggttgaagaacttcaagtacttgctcaacactaa |
197 |
Q |
| |
|
| |||||||||||| |||||||| || ||| | ||||| |||||||||||||||||||||||||||||||| |||| |||| ||||||||||||| |
|
|
| T |
26706686 |
acccaacttggtaatgataatccgtcgtagtactttatttccaagcacttgagatttgagtgaggttgaagcactttgagtagctgctcaacactaa |
26706782 |
T |
 |
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Target: chr1 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 7582439 - 7582395
Alignment:
| Q |
142 |
caagcacttgagatttgagtgaggttgaagaacttcaagtacttg |
186 |
Q |
| |
|
||||| ||||||||||| |||||||||||| |||||||||||||| |
|
|
| T |
7582439 |
caagctcttgagatttgtgtgaggttgaagcacttcaagtacttg |
7582395 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 204
Target Start/End: Original strand, 7098738 - 7098869
Alignment:
| Q |
73 |
aagagaaattaaattactaagaataatcatccaacttggtaacgataatccttcatagcaatttatatccaagcacttgagatttgagtgaggttgaaga |
172 |
Q |
| |
|
||||| || ||||||||||||| | | ||||||||||| || ||||||||| || ||| ||| | ||||| ||||||||||| ||||||||||| |
|
|
| T |
7098738 |
aagagtaactaaattactaagagttctgatccaacttggaaagcataatccttggtaagaatgtattttcaagctcttgagatttgtatgaggttgaagc |
7098837 |
T |
 |
| Q |
173 |
acttcaagtacttgctcaacactaacaacagg |
204 |
Q |
| |
|
||||||| |||||| ||| |||| | |||||| |
|
|
| T |
7098838 |
acttcaattacttgatcatcactgataacagg |
7098869 |
T |
 |
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