View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10667_low_15 (Length: 243)
Name: NF10667_low_15
Description: NF10667
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10667_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 91; Significance: 3e-44; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 33063676 - 33063586
Alignment:
| Q |
13 |
acatcaaatgcagatcaatactcaataacattacaaaactaaatcaattaactgacacaataaaaatgaagcaagcacacaatacagggat |
103 |
Q |
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| T |
33063676 |
acatcaaatgcagatcaatactcaataacattacaaaactaaatcaattaactgacacaataaaaatgaagcaagcacacaatacagggat |
33063586 |
T |
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Target: chr7; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 33063512 - 33063465
Alignment:
| Q |
177 |
gcagatcaatatcaatacatcaacagatcaaatcaattaactaattat |
224 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33063512 |
gcagatcaatatcaatacatcaacagatcaaatcaattaactaattat |
33063465 |
T |
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