View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10667_low_19 (Length: 238)
Name: NF10667_low_19
Description: NF10667
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10667_low_19 |
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Alignment Details
Target: chr4 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 18 - 224
Target Start/End: Original strand, 15832766 - 15832972
Alignment:
| Q |
18 |
gagtgttctttcaaagagatggaaatttctttggacatcttttcctgatcttgatttcacaactcttgatccatttccacttatttcaaccaaaaatcat |
117 |
Q |
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| T |
15832766 |
gagtgttctttcaaagagatggaaatttctttggacatcttttcctgatcttgatttcacaactcttgatccatttccacttatttcaaccaaaaatcat |
15832865 |
T |
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| Q |
118 |
aagaaaattgatatatcaagacaccctttatcttcttcaaaacttgatttcatcacccaagttctttctattcgcgacgtaaaacataaagacataaggg |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |
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| T |
15832866 |
aagaaaattgatatatcaagacaccctttatcttcttcaaaacttgatttcatcacccaagttctttctattcgcgatgtaaaacataaagatataaggg |
15832965 |
T |
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| Q |
218 |
tcctttg |
224 |
Q |
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| T |
15832966 |
tcctttg |
15832972 |
T |
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