View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10667_low_27 (Length: 204)
Name: NF10667_low_27
Description: NF10667
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10667_low_27 |
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Alignment Details
Target: chr5 (Bit Score: 124; Significance: 5e-64; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 18525421 - 18525577
Alignment:
| Q |
18 |
agatttgaagcattgtcagaaattgaggcagctgacagaactaagttaaaggttgatctgatagtgaannnnnnnattattgaacctcctttgattcctg |
117 |
Q |
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| T |
18525421 |
agatttgaagcattgtcagaaattgaggcacctgacagaactaagttaaaggttgatctgatagtgaaattttt-attattgaacctcctttgattcctg |
18525519 |
T |
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| Q |
118 |
caataccatatggtgctgaaacaatggataatggcaaataaaattaccaatctacatt |
175 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
18525520 |
caataccatatggtgctgaaacaatggataatggcagataaaattaccaatctacatt |
18525577 |
T |
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