View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10668_4 (Length: 457)

Name: NF10668_4
Description: NF10668
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10668_4
NF10668_4
[»] chr6 (24 HSPs)
chr6 (218-457)||(4923578-4923817)
chr6 (63-219)||(30438736-30438892)
chr6 (76-219)||(28605569-28605712)
chr6 (75-177)||(12217532-12217635)
chr6 (74-166)||(12605662-12605754)
chr6 (69-168)||(10145265-10145364)
chr6 (69-219)||(2913332-2913482)
chr6 (76-176)||(8264978-8265078)
chr6 (84-156)||(9343134-9343206)
chr6 (81-160)||(3847466-3847545)
chr6 (80-176)||(359587-359683)
chr6 (10-72)||(4923814-4923876)
chr6 (67-132)||(17598108-17598173)
chr6 (69-135)||(2913416-2913482)
chr6 (75-177)||(29284539-29284641)
chr6 (89-161)||(33127843-33127915)
chr6 (69-136)||(2230431-2230498)
chr6 (73-117)||(8265073-8265117)
chr6 (69-117)||(23916228-23916276)
chr6 (69-117)||(31632204-31632252)
chr6 (74-117)||(18491758-18491801)
chr6 (87-219)||(23916145-23916276)
chr6 (69-136)||(33119984-33120051)
chr6 (187-219)||(19388005-19388037)
[»] chr4 (77 HSPs)
chr4 (69-216)||(54864063-54864210)
chr4 (69-216)||(43141768-43141915)
chr4 (69-220)||(37895253-37895404)
chr4 (68-177)||(8347533-8347642)
chr4 (69-219)||(33622879-33623029)
chr4 (69-219)||(35877313-35877463)
chr4 (69-219)||(36196364-36196514)
chr4 (69-224)||(32193469-32193624)
chr4 (73-212)||(50511251-50511390)
chr4 (75-219)||(25874704-25874849)
chr4 (76-174)||(50511471-50511569)
chr4 (74-219)||(43556690-43556836)
chr4 (69-219)||(33615778-33615928)
chr4 (72-177)||(35929012-35929117)
chr4 (77-176)||(52966437-52966536)
chr4 (80-219)||(52136698-52136837)
chr4 (74-220)||(4418101-4418247)
chr4 (69-219)||(25756711-25756861)
chr4 (63-161)||(24100752-24100850)
chr4 (75-208)||(54673315-54673448)
chr4 (75-219)||(19350611-19350753)
chr4 (69-219)||(29686399-29686549)
chr4 (84-153)||(52278032-52278101)
chr4 (66-177)||(31853063-31853174)
chr4 (75-166)||(42159978-42160069)
chr4 (74-218)||(56491072-56491216)
chr4 (69-214)||(27587250-27587395)
chr4 (103-175)||(40592755-40592827)
chr4 (69-177)||(9813497-9813605)
chr4 (63-117)||(52136692-52136746)
chr4 (78-175)||(1205091-1205187)
chr4 (84-153)||(22210803-22210872)
chr4 (69-133)||(53225729-53225793)
chr4 (66-116)||(25756708-25756758)
chr4 (70-151)||(41116562-41116643)
chr4 (69-117)||(4418198-4418246)
chr4 (62-110)||(17316588-17316636)
chr4 (73-161)||(23558963-23559051)
chr4 (69-117)||(29686399-29686447)
chr4 (74-117)||(1100900-1100943)
chr4 (76-175)||(1140871-1140970)
chr4 (81-136)||(24100886-24100941)
chr4 (69-136)||(44111827-44111894)
chr4 (68-126)||(16412232-16412290)
chr4 (69-135)||(37895254-37895320)
chr4 (76-117)||(7086232-7086273)
chr4 (64-133)||(48361046-48361115)
chr4 (74-135)||(56491076-56491137)
chr4 (69-117)||(32193474-32193522)
chr4 (69-132)||(19150657-19150720)
chr4 (69-132)||(20459326-20459389)
chr4 (72-111)||(27587248-27587287)
chr4 (80-175)||(28460756-28460851)
chr4 (66-117)||(36196361-36196412)
chr4 (69-132)||(42804255-42804318)
chr4 (69-132)||(47866035-47866098)
chr4 (71-117)||(3740405-3740451)
chr4 (75-117)||(9894630-9894672)
chr4 (87-133)||(21554193-21554239)
chr4 (185-219)||(29686515-29686549)
chr4 (79-117)||(31853168-31853206)
chr4 (69-135)||(31854378-31854444)
chr4 (69-111)||(42160080-42160122)
chr4 (74-132)||(43020760-43020818)
chr4 (194-223)||(5813690-5813719)
chr4 (72-117)||(28815880-28815925)
chr4 (74-135)||(43141770-43141831)
chr4 (80-117)||(54673411-54673448)
chr4 (74-135)||(54864147-54864208)
chr4 (69-117)||(3094363-3094411)
chr4 (187-219)||(25756829-25756861)
chr4 (74-110)||(28020585-28020621)
chr4 (75-135)||(32517775-32517835)
chr4 (194-222)||(33615775-33615803)
chr4 (69-117)||(33622879-33622927)
chr4 (69-97)||(34319502-34319530)
chr4 (69-117)||(48195991-48196039)
[»] chr8 (40 HSPs)
chr8 (63-219)||(34604774-34604930)
chr8 (69-219)||(13831874-13832024)
chr8 (69-219)||(35583882-35584032)
chr8 (80-219)||(29690446-29690585)
chr8 (69-219)||(7548496-7548647)
chr8 (69-219)||(45372704-45372854)
chr8 (69-219)||(43932048-43932198)
chr8 (80-156)||(44579955-44580031)
chr8 (69-219)||(43292567-43292717)
chr8 (69-175)||(34745256-34745362)
chr8 (69-219)||(43409833-43409983)
chr8 (78-156)||(9633089-9633167)
chr8 (87-176)||(38298543-38298632)
chr8 (64-132)||(10839757-10839825)
chr8 (84-177)||(38494253-38494346)
chr8 (75-175)||(24599674-24599774)
chr8 (115-176)||(40645752-40645813)
chr8 (69-117)||(43932048-43932096)
chr8 (69-172)||(5356792-5356895)
chr8 (68-135)||(29690519-29690586)
chr8 (69-136)||(35794608-35794675)
chr8 (62-117)||(40645702-40645757)
chr8 (69-135)||(43409833-43409899)
chr8 (76-133)||(7693118-7693175)
chr8 (82-175)||(9550152-9550245)
chr8 (74-133)||(24822808-24822867)
chr8 (69-132)||(35011211-35011274)
chr8 (69-135)||(34604864-34604930)
chr8 (69-135)||(35583966-35584032)
chr8 (79-117)||(43292669-43292707)
chr8 (63-136)||(1223116-1223189)
chr8 (67-136)||(5031461-5031530)
chr8 (67-132)||(22429532-22429597)
chr8 (69-133)||(10184636-10184700)
chr8 (69-117)||(24177971-24178019)
chr8 (187-219)||(34745256-34745288)
chr8 (187-219)||(43292567-43292599)
chr8 (76-136)||(43332566-43332626)
chr8 (187-219)||(43932166-43932198)
chr8 (76-132)||(44796348-44796404)
[»] chr7 (61 HSPs)
chr7 (64-219)||(41487785-41487940)
chr7 (69-219)||(41395661-41395811)
chr7 (69-175)||(47484064-47484170)
chr7 (69-166)||(12806907-12807004)
chr7 (69-219)||(27320293-27320443)
chr7 (69-176)||(18064721-18064828)
chr7 (68-166)||(40198602-40198700)
chr7 (74-175)||(45123249-45123350)
chr7 (64-172)||(37006502-37006611)
chr7 (74-219)||(24164520-24164665)
chr7 (94-219)||(47280173-47280297)
chr7 (67-219)||(47612287-47612439)
chr7 (76-219)||(22618169-22618312)
chr7 (75-175)||(45025599-45025699)
chr7 (68-216)||(10674121-10674269)
chr7 (69-133)||(24932382-24932446)
chr7 (66-214)||(41088848-41088996)
chr7 (59-161)||(33901027-33901129)
chr7 (61-161)||(13860274-13860374)
chr7 (69-154)||(48948941-48949028)
chr7 (100-175)||(7456462-7456537)
chr7 (79-219)||(29559436-29559576)
chr7 (81-177)||(33039601-33039699)
chr7 (66-136)||(10007658-10007728)
chr7 (100-177)||(7999489-7999566)
chr7 (69-166)||(14543267-14543364)
chr7 (79-212)||(3633197-3633330)
chr7 (80-172)||(28248441-28248533)
chr7 (69-132)||(2523856-2523919)
chr7 (67-219)||(40234765-40234917)
chr7 (100-176)||(39413858-39413934)
chr7 (68-135)||(29559435-29559502)
chr7 (62-117)||(40234758-40234813)
chr7 (75-117)||(22618264-22618306)
chr7 (69-135)||(47612373-47612439)
chr7 (76-117)||(3633197-3633238)
chr7 (67-136)||(11668097-11668166)
chr7 (185-226)||(24932484-24932525)
chr7 (74-135)||(41088935-41088996)
chr7 (75-135)||(7456424-7456484)
chr7 (69-117)||(24164617-24164665)
chr7 (81-161)||(31903007-31903087)
chr7 (69-117)||(33901139-33901187)
chr7 (63-126)||(13807235-13807298)
chr7 (69-132)||(27231919-27231982)
chr7 (69-136)||(36245458-36245525)
chr7 (87-134)||(48082816-48082863)
chr7 (69-135)||(7107713-7107779)
chr7 (69-135)||(21857064-21857130)
chr7 (67-117)||(28248536-28248586)
chr7 (87-133)||(41850613-41850659)
chr7 (67-136)||(28677399-28677468)
chr7 (88-133)||(29365706-29365751)
chr7 (67-136)||(40142855-40142924)
chr7 (69-133)||(26982759-26982823)
chr7 (187-223)||(33901033-33901069)
chr7 (88-136)||(34118021-34118069)
chr7 (69-117)||(41487892-41487940)
chr7 (69-117)||(45025695-45025743)
chr7 (67-146)||(45058081-45058161)
chr7 (187-219)||(48119331-48119363)
[»] chr5 (39 HSPs)
chr5 (69-216)||(20502086-20502233)
chr5 (69-219)||(33247291-33247440)
chr5 (67-221)||(38978739-38978893)
chr5 (69-219)||(29451892-29452041)
chr5 (69-219)||(7537020-7537170)
chr5 (74-219)||(29874316-29874461)
chr5 (69-176)||(35204923-35205029)
chr5 (69-176)||(35212130-35212236)
chr5 (79-219)||(24173419-24173559)
chr5 (80-236)||(29002724-29002880)
chr5 (69-175)||(32455182-32455288)
chr5 (69-219)||(5355550-5355700)
chr5 (69-175)||(27600758-27600863)
chr5 (74-208)||(9630245-9630379)
chr5 (74-172)||(33970703-33970801)
chr5 (69-219)||(13932460-13932610)
chr5 (69-166)||(19211279-19211376)
chr5 (69-219)||(73783-73933)
chr5 (62-116)||(13932563-13932617)
chr5 (69-117)||(8680642-8680690)
chr5 (88-171)||(13128211-13128294)
chr5 (69-132)||(13789818-13789881)
chr5 (74-117)||(17225162-17225205)
chr5 (69-156)||(35318576-35318663)
chr5 (69-132)||(38394427-38394490)
chr5 (73-111)||(13278993-13279031)
chr5 (69-135)||(15968310-15968376)
chr5 (69-109)||(5355660-5355700)
chr5 (69-132)||(3814057-3814120)
chr5 (69-116)||(7313928-7313975)
chr5 (69-132)||(22731344-22731407)
chr5 (69-135)||(5240221-5240287)
chr5 (67-117)||(29031137-29031187)
chr5 (69-111)||(30132841-30132883)
chr5 (185-219)||(30132903-30132937)
chr5 (68-136)||(11931967-11932036)
chr5 (68-117)||(40515278-40515327)
chr5 (69-117)||(73783-73831)
chr5 (85-133)||(892562-892610)
[»] chr3 (56 HSPs)
chr3 (69-219)||(27302078-27302228)
chr3 (69-219)||(45113733-45113883)
chr3 (81-220)||(43901592-43901731)
chr3 (79-219)||(53284325-53284465)
chr3 (69-219)||(16123756-16123905)
chr3 (69-219)||(53703729-53703880)
chr3 (69-219)||(31376174-31376324)
chr3 (69-219)||(39616910-39617060)
chr3 (76-177)||(21944295-21944396)
chr3 (76-156)||(46220372-46220452)
chr3 (75-142)||(50660014-50660081)
chr3 (69-161)||(19227365-19227457)
chr3 (69-161)||(24489370-24489461)
chr3 (69-176)||(50100236-50100344)
chr3 (69-175)||(44118226-44118332)
chr3 (69-213)||(48643609-48643753)
chr3 (81-177)||(36191485-36191584)
chr3 (69-166)||(48346502-48346599)
chr3 (69-124)||(2544436-2544491)
chr3 (111-219)||(8769175-8769282)
chr3 (69-132)||(21662885-21662948)
chr3 (69-132)||(53441993-53442056)
chr3 (103-217)||(2544491-2544606)
chr3 (100-150)||(44664212-44664262)
chr3 (111-172)||(8764273-8764334)
chr3 (69-117)||(31376174-31376222)
chr3 (65-135)||(22003879-22003949)
chr3 (65-135)||(22011396-22011466)
chr3 (81-175)||(45746482-45746576)
chr3 (69-117)||(53703831-53703880)
chr3 (69-125)||(25113348-25113404)
chr3 (69-117)||(39616910-39616958)
chr3 (75-135)||(48643609-48643669)
chr3 (76-135)||(379156-379215)
chr3 (84-213)||(19899626-19899756)
chr3 (69-132)||(28406553-28406616)
chr3 (69-132)||(51516957-51517019)
chr3 (67-117)||(105468-105518)
chr3 (69-135)||(42896141-42896207)
chr3 (87-133)||(51723395-51723441)
chr3 (69-135)||(53284399-53284465)
chr3 (103-172)||(6061115-6061184)
chr3 (68-133)||(25313626-25313691)
chr3 (80-129)||(34269327-34269376)
chr3 (87-136)||(44518053-44518102)
chr3 (187-219)||(2544436-2544468)
chr3 (85-117)||(4190725-4190757)
chr3 (69-117)||(8769235-8769282)
chr3 (65-161)||(13356791-13356887)
chr3 (187-219)||(19227425-19227457)
chr3 (69-133)||(27161440-27161504)
chr3 (69-133)||(28406466-28406530)
chr3 (69-117)||(36571471-36571519)
chr3 (66-98)||(40344852-40344884)
chr3 (69-117)||(43901682-43901730)
chr3 (187-219)||(53703729-53703761)
[»] chr2 (32 HSPs)
chr2 (69-222)||(36103389-36103542)
chr2 (64-207)||(15239703-15239846)
chr2 (69-177)||(28143786-28143894)
chr2 (69-214)||(40534517-40534662)
chr2 (63-177)||(23464537-23464652)
chr2 (69-213)||(45076341-45076485)
chr2 (84-156)||(27306725-27306797)
chr2 (69-219)||(25795237-25795387)
chr2 (69-177)||(41464713-41464821)
chr2 (81-177)||(3365316-3365412)
chr2 (84-166)||(9373446-9373528)
chr2 (69-219)||(27311576-27311726)
chr2 (79-219)||(6971579-6971719)
chr2 (69-176)||(38448980-38449087)
chr2 (69-117)||(6971671-6971719)
chr2 (84-172)||(11687521-11687609)
chr2 (69-133)||(12873722-12873786)
chr2 (75-133)||(5109368-5109426)
chr2 (69-135)||(25795237-25795303)
chr2 (87-133)||(28249018-28249064)
chr2 (77-150)||(6971503-6971576)
chr2 (87-132)||(12962722-12962767)
chr2 (68-137)||(36881531-36881600)
chr2 (81-145)||(44283605-44283670)
chr2 (69-136)||(7943521-7943589)
chr2 (69-133)||(41153196-41153260)
chr2 (69-132)||(45034397-45034460)
chr2 (69-135)||(3365274-3365340)
chr2 (69-135)||(29866165-29866231)
chr2 (75-132)||(38554544-38554601)
chr2 (194-227)||(39063768-39063801)
chr2 (94-150)||(4410845-4410901)
[»] scaffold0200 (1 HSPs)
scaffold0200 (60-214)||(25618-25773)
[»] chr1 (42 HSPs)
chr1 (84-214)||(45977098-45977228)
chr1 (64-219)||(52279233-52279388)
chr1 (69-219)||(51590429-51590579)
chr1 (74-219)||(13320302-13320447)
chr1 (83-219)||(44224283-44224418)
chr1 (69-216)||(15699463-15699610)
chr1 (81-219)||(27687840-27687978)
chr1 (100-176)||(29438168-29438244)
chr1 (69-212)||(19998410-19998553)
chr1 (91-156)||(32837657-32837722)
chr1 (62-208)||(31050242-31050388)
chr1 (69-219)||(48565526-48565676)
chr1 (102-172)||(13770741-13770811)
chr1 (69-142)||(25238649-25238722)
chr1 (74-219)||(13321718-13321863)
chr1 (74-224)||(22182759-22182909)
chr1 (67-131)||(29256685-29256749)
chr1 (69-133)||(50155383-50155447)
chr1 (69-136)||(38040358-38040425)
chr1 (103-161)||(12175508-12175566)
chr1 (80-219)||(18038698-18038837)
chr1 (69-117)||(48565628-48565676)
chr1 (69-117)||(51590531-51590579)
chr1 (61-135)||(26545080-26545154)
chr1 (87-175)||(640539-640626)
chr1 (69-117)||(34768375-34768423)
chr1 (76-136)||(49944839-49944899)
chr1 (87-126)||(18744576-18744615)
chr1 (69-132)||(26924212-26924275)
chr1 (69-132)||(43929431-43929494)
chr1 (74-117)||(52030872-52030915)
chr1 (65-111)||(22182760-22182806)
chr1 (87-136)||(7375551-7375600)
chr1 (76-117)||(34174892-34174933)
chr1 (81-153)||(2543322-2543394)
chr1 (69-117)||(5966873-5966921)
chr1 (69-133)||(9675961-9676025)
chr1 (69-117)||(18038789-18038837)
chr1 (69-117)||(19998512-19998560)
chr1 (80-156)||(20486667-20486743)
chr1 (75-135)||(33325416-33325476)
chr1 (85-117)||(52112972-52113004)
[»] scaffold0059 (2 HSPs)
scaffold0059 (69-219)||(26585-26735)
scaffold0059 (69-117)||(26585-26633)
[»] scaffold0110 (1 HSPs)
scaffold0110 (69-177)||(40232-40340)
[»] scaffold0023 (2 HSPs)
scaffold0023 (69-219)||(112822-112972)
scaffold0023 (69-117)||(112822-112870)
[»] scaffold0767 (2 HSPs)
scaffold0767 (69-177)||(3808-3916)
scaffold0767 (187-219)||(3808-3840)
[»] scaffold0176 (1 HSPs)
scaffold0176 (81-153)||(19308-19377)
[»] scaffold0015 (1 HSPs)
scaffold0015 (69-168)||(17384-17483)
[»] scaffold0287 (2 HSPs)
scaffold0287 (79-212)||(12755-12888)
scaffold0287 (76-117)||(12847-12888)
[»] scaffold0533 (1 HSPs)
scaffold0533 (77-176)||(3282-3381)
[»] scaffold0027 (1 HSPs)
scaffold0027 (83-175)||(5457-5549)
[»] scaffold0460 (2 HSPs)
scaffold0460 (80-161)||(12223-12304)
scaffold0460 (80-156)||(7656-7732)
[»] scaffold0007 (1 HSPs)
scaffold0007 (69-133)||(77344-77408)


Alignment Details
Target: chr6 (Bit Score: 212; Significance: 1e-116; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 218 - 457
Target Start/End: Complemental strand, 4923817 - 4923578
Alignment:
Q  218 tactatatttgttcttaaagtacaagacatttaagaaagggaaaacacctaatggctaatgaggtcccaatcttaatatggtccctaatgtttgaaactg 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  4923817 tactatatttgttcttaaagtacaagacatttaagaaagggaaaacccctaatggctaataaggtcccaatcttaatatggtccctaatgtttgaaattg 4923718  T
Q  318 tgcatcccttttttcttgtttctttttcagtgggtgtgacttggaaaggttgggatgtcagaggtggcgttataaaggcggggtgtgttggtgggcgaat 417  Q
    |||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4923717 tgcatcacttttttcttgtttctttttcagtaggtgtgacttgaaaaggttgggatgtcagaggtggcgttataaaggcggggtgtgttggtgggcgaat 4923618  T
Q  418 tcatcgcctcattaggctgtgtgctttctgaggttgactg 457  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  4923617 tcatcgcctcattaggctatgtgctttctgaggttgactg 4923578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 63 - 219
Target Start/End: Original strand, 30438736 - 30438892
Alignment:
Q  63 aaatattacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcc 162  Q
    ||||| |||| ||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||     
T  30438736 aaataatactcccttcgatccttattataagaaaaagttgactttttagattcatagaataattaatgtattttattgtaaatatagactagatacatca 30438835  T
Q  163 cttatacaatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    |||||||||| ||||       |||||| | |||||||||||||| |||||||||||    
T  30438836 cttatacaataaaccaaaaaagttaattatttcttataataaggatcggagggagta 30438892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 76 - 219
Target Start/End: Complemental strand, 28605712 - 28605569
Alignment:
Q  76 tccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaa 175  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||  || || |||| |||| ||||||||    
T  28605712 tccggtccttattataagaaaaagctgaccttttagattcatagaataattaatgtatcttattgtaaatatagtttaaatacatcacttacacaatgaa 28605613  T
Q  176 ccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    ||       |||||||| |||||||||||||||| |||||||||    
T  28605612 ccaaaaaagttaattgtttcttataataaggaccagagggagta 28605569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 75 - 177
Target Start/End: Complemental strand, 12217635 - 12217532
Alignment:
Q  75 ctccggtccttattataagaaaaag-ttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatg 173  Q
    ||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||     
T  12217635 ctccggtccttattataagaaaaaaattgactttttagattcatagaataattaatgtatcttattgtaaatatagactagatacatcacttatacaata 12217536  T
Q  174 aacc 177  Q
    ||||    
T  12217535 aacc 12217532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 74 - 166
Target Start/End: Complemental strand, 12605754 - 12605662
Alignment:
Q  74 cctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatccctta 166  Q
    ||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| || |||| ||||    
T  12605754 cctccggtctttattataagaaaaagttgacattttaggttcatggaataattaatgtatcttattgtaaatatagactaaatacatcactta 12605662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 69 - 168
Target Start/End: Complemental strand, 10145364 - 10145265
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| ||| ||||| ||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  10145364 tactcccttcggtctttattataaaaaaaaattgactttttaggttcataaaataattaatgtatcttattgtaaatatagactagatacatcacttata 10145265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 69 - 219
Target Start/End: Original strand, 2913332 - 2913482
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| |||||||||||||||||||| || | |||||||||||| ||||| |||||||||||||   |  || |||||||||||||||| |||  ||||||    
T  2913332 tactccctccggtccttattataagcaacatttgactttttagattcattgaataattaatgttcgtcgttataaatatagactagatacattacttata 2913431  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    |||||||||       | ||||||  |||||||||||||||||||||||||    
T  2913432 caatgaacctaaaaagtcaattgttgcttataataaggaccggagggagta 2913482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 76 - 176
Target Start/End: Original strand, 8264978 - 8265078
Alignment:
Q  76 tccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaa 175  Q
    ||||||| ||||||||| ||| | |||| |||||  ||||||||||||||||||||||||| || |||||||||||||||| |||| |||| ||||||||    
T  8264978 tccggtctttattataaaaaacaattgatttttttagttcatagaataattaatgtatcttgttataaatatagactagatacatcacttacacaatgaa 8265077  T
Q  176 c 176  Q
    |    
T  8265078 c 8265078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 84 - 156
Target Start/End: Original strand, 9343134 - 9343206
Alignment:
Q  84 ttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagat 156  Q
    ||||||||||||| | |||||||||||| |||||||||||||||||||||||| || ||||||||||||||||    
T  9343134 ttattataagaaataattgactttttagattcatagaataattaatgtatcttgttataaatatagactagat 9343206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 81 - 160
Target Start/End: Complemental strand, 3847545 - 3847466
Alignment:
Q  81 tccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcat 160  Q
    ||||| ||||||||||||  |||||||||||||||||| |||||||||| ||| ||||| ||||||||||||||||||||    
T  3847545 tccttgttataagaaaaaagtgactttttaggttcatataataattaatatattttattataaatatagactagatgcat 3847466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 80 - 176
Target Start/End: Complemental strand, 359683 - 359587
Alignment:
Q  80 gtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaac 176  Q
    ||||||||||||||||| | |||||||||||||||||  |||||| ||||||||||  || |||||||||| ||||| |||| |||| |||||||||    
T  359683 gtccttattataagaaacaattgactttttaggttcaatgaataactaatgtatctcgttataaatatagattagatacatcacttacacaatgaac 359587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 4923876 - 4923814
Alignment:
Q  10 attatactatgagtatgtcgtttatacttttttatcactcaagatgtctttttaaatattact 72  Q
    |||||||||||||||  |||||||||| ||||||||||||||||||| |||||||||||||||    
T  4923876 attatactatgagtacatcgtttatacatttttatcactcaagatgtatttttaaatattact 4923814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 17598108 - 17598173
Alignment:
Q  67 attacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgta 132  Q
    ||||||||||||||||||| |||||||||||| |||||||||||  || |||||||||||||||||    
T  17598108 attacttcctccggtccttcttataagaaaaaattgactttttaaatttatagaataattaatgta 17598173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 2913482 - 2913416
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatct 135  Q
    |||| |||||||||||||||||||| || | |||||||||||||||||| | |||| ||||||||||    
T  2913482 tactccctccggtccttattataagcaacaattgactttttaggttcattgtataagtaatgtatct 2913416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 75 - 177
Target Start/End: Complemental strand, 29284641 - 29284539
Alignment:
Q  75 ctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatga 174  Q
    |||| |||||||| |||||||| | || ||| ||||| ||||| |||||||||||| ||||  || |||||||||||||||| |||| |||| | |||||    
T  29284641 ctcccgtccttataataagaaacaattaactgtttagtttcattgaataattaatgcatctcgttataaatatagactagatacatcacttacataatga 29284542  T
Q  175 acc 177  Q
    |||    
T  29284541 acc 29284539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 33127915 - 33127843
Alignment:
Q  89 ataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatc 161  Q
    |||||||| | |||||||||||| || || |||||||||||||||||| ||  ||||||||||||||| ||||    
T  33127915 ataagaaacaattgactttttagatttattgaataattaatgtatcttgttacaaatatagactagatacatc 33127843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 2230498 - 2230431
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatctt 136  Q
    |||| |||||||||||  |||||||||||  |||||||||||| ||||| || |||||||||||||||    
T  2230498 tactccctccggtcctatttataagaaaactttgactttttagattcattgagtaattaatgtatctt 2230431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 117
Target Start/End: Complemental strand, 8265117 - 8265073
Alignment:
Q  73 tcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    ||||||| ||||||||||||||||||||||| |||||| ||||||    
T  8265117 tcctccgttccttattataagaaaaagttgattttttaagttcat 8265073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 23916276 - 23916228
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||| ||||||||||||||||||||||| | |||||||||||| |||||    
T  23916276 tactccctccggtccttattataagaaacaattgactttttagattcat 23916228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 31632252 - 31632204
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||| |||||||||  ||||||||| |||||||||||||||||||||||    
T  31632252 tactccctccggtcactattataagtaaaagttgactttttaggttcat 31632204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 117
Target Start/End: Complemental strand, 18491801 - 18491758
Alignment:
Q  74 cctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||||||||  ||||||||| |||||||||||||||||||||||    
T  18491801 cctccggtcactattataagtaaaagttgactttttaggttcat 18491758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 219
Target Start/End: Original strand, 23916145 - 23916276
Alignment:
Q  87 ttataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaaccnnnnnnntt 186  Q
    |||||| ||| ||||||||||| | ||||||  |||| |||||||||||  || |||||||||| |||||  ||| | || |||||||| |       |     
T  23916145 ttataaaaaacagttgactttt-acgttcattaaatatttaatgtatctcgttataaatatagattagatatatcacatacacaatgaatctaaaaagtc 23916243  T
Q  187 aattgtctcttataataaggaccggagggagta 219  Q
    |||||| ||||||||||||||||||||||||||    
T  23916244 aattgtttcttataataaggaccggagggagta 23916276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 33120051 - 33119984
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatctt 136  Q
    ||||||||||||| ||  |||||||||||  |||||||||||| ||||| |||||||  |||||||||    
T  33120051 tacttcctccggttctatttataagaaaattttgactttttagattcattgaataatcgatgtatctt 33119984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 219
Target Start/End: Complemental strand, 19388037 - 19388005
Alignment:
Q  187 aattgtctcttataataaggaccggagggagta 219  Q
    ||||||||||||||| |||||||||||||||||    
T  19388037 aattgtctcttataaaaaggaccggagggagta 19388005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 7e-56; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 69 - 216
Target Start/End: Original strand, 54864063 - 54864210
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  54864063 tactccctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatacatcacttata 54864162  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggaggga 216  Q
    |||||||||       |||||||| |||||||||||||||||||||||    
T  54864163 caatgaaccaaaaaagttaattgtttcttataataaggaccggaggga 54864210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 69 - 216
Target Start/End: Complemental strand, 43141915 - 43141768
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||    
T  43141915 tacttcctccggtctttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagattagatacatcacttata 43141816  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggaggga 216  Q
    |||||||||       |||||||| |||||||||||||||||||||||    
T  43141815 caatgaaccaaaaaagttaattgtttcttataataaggaccggaggga 43141768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 69 - 220
Target Start/End: Complemental strand, 37895404 - 37895253
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||| |||| ||||||    
T  37895404 tactccctccggtccttattataagaaaaagttgactttttagattcatagaataattaatgtattttattgtaaatgtagactagatacatcacttata 37895305  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagtac 220  Q
    |||||||||       | || ||| |||||||||||||||||||||||||||    
T  37895304 caatgaaccaaaaaaatcaactgtttcttataataaggaccggagggagtac 37895253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 8347642 - 8347533
Alignment:
Q  68 ttacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttat 167  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||  ||||    
T  8347642 ttactccctccggtccttattataagaaaaagttgactttttaggttcatagaataaataatgtatcttattgtaaatatagactagatacatcatttat 8347543  T
Q  168 acaatgaacc 177  Q
    ||||||||||    
T  8347542 acaatgaacc 8347533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 69 - 219
Target Start/End: Complemental strand, 33623029 - 33622879
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| |||||| ||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||| | ||||    
T  33623029 tactccctccgatccctattataagaaaaaattgactttttacgttcatagaataattaatgtatcttattgtaaatataaactagatacatcacctata 33622930  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    |||||||||       |||||||| ||||||||||||||||||||||||||    
T  33622929 caatgaaccaaaaaagttaattgtttcttataataaggaccggagggagta 33622879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 69 - 219
Target Start/End: Original strand, 35877313 - 35877463
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| || |||| |||| |    
T  35877313 tactccctccggtccttattataagaaaaagttgactttttagattcatagaataattaatgtatcttattgtaaatatagtctaaatacatcacttaca 35877412  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    |||||||||       |||||||| |||||||||||||| ||| |||||||    
T  35877413 caatgaaccaaaaaaattaattgtttcttataataaggatcggtgggagta 35877463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 69 - 219
Target Start/End: Complemental strand, 36196514 - 36196364
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| ||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||| ||||||| || |||| ||||||    
T  36196514 tactccctccggtccttattataagaaaaaattgattttttagattcatagaataattaatgtatcttattgtaaatgtagactatatacatcacttata 36196415  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
     ||||||||       | |||||| ||||||||||||||||||||||||||    
T  36196414 aaatgaaccaaaaaaatcaattgtttcttataataaggaccggagggagta 36196364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 69 - 224
Target Start/End: Complemental strand, 32193624 - 32193469
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    ||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||||  ||||||||||||||| |||  |||| |    
T  32193624 tacttcctccggtccttattataagaaaacgttgattttttaagttcatagaataattaatgtaccttattagaaatatagactagatacattacttaca 32193525  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagtactata 224  Q
     ||||||||       | |||||| |||||||||||||||||||||||||||||||    
T  32193524 taatgaaccaaaaaagtcaattgtttcttataataaggaccggagggagtactata 32193469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 73 - 212
Target Start/End: Complemental strand, 50511390 - 50511251
Alignment:
Q  73 tcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaat 172  Q
    ||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||| ||| || |||| |||| |||||    
T  50511390 tcctccggtccttattataagaaaaagttgactctttagatttatagaataattaatgtatcttattgtaaatatagtctaaatacatcacttacacaat 50511291  T
Q  173 gaaccnnnnnnnttaattgtctcttataataaggaccgga 212  Q
    |||||       |||||||| ||||||||||| |||||||    
T  50511290 gaaccaaaaaagttaattgtttcttataataaagaccgga 50511251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 75 - 219
Target Start/End: Original strand, 25874704 - 25874849
Alignment:
Q  75 ctccggtccttattataagaaaaagtt-gactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatg 173  Q
    |||||||||||||||||| |||||  | || ||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||    
T  25874704 ctccggtccttattataaaaaaaaaatagattttttagattcatagaataattaatgtattttattgtaaatatagactagatacatcacttatacaatg 25874803  T
Q  174 aaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    ||||       |||||| | ||||||||||||||||||||||||||    
T  25874804 aaccaaaaaaattaattctttcttataataaggaccggagggagta 25874849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 76 - 174
Target Start/End: Complemental strand, 50511569 - 50511471
Alignment:
Q  76 tccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatga 174  Q
    ||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||    
T  50511569 tccggtcttcattataagaaaaagttgactctttaggttcatagaataattaatgtatcttattgtaaatataaactagatacatcccttacacaatga 50511471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 74 - 219
Target Start/End: Complemental strand, 43556836 - 43556690
Alignment:
Q  74 cctccggtccttattataagaaaaag-ttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaat 172  Q
    |||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| | || |||| ||||     
T  43556836 cctccggtccttattataagaaaaaaattgattttttaggttcatagaataattaatgtatcttattgtaaatgtagactagatacgtcacttacacaac 43556737  T
Q  173 gaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    ||||        | |||||| ||||||||||||||||||||||||||    
T  43556736 gaactaaaaaaatcaattgtttcttataataaggaccggagggagta 43556690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 69 - 219
Target Start/End: Original strand, 33615778 - 33615928
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| |||||||||||||||||||||||   |||| ||||||| ||||| || ||||||||||||||||||||||||||||||||||| |||| |||| |    
T  33615778 tactccctccggtccttattataagaaacttttgattttttagattcattgagtaattaatgtatcttattgtaaatatagactagatacatcacttaca 33615877  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    ||||||| |       | |||||| | ||||||||||||||||||||||||    
T  33615878 caatgaatctaaaaattcaattgttttttataataaggaccggagggagta 33615928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 72 - 177
Target Start/End: Original strand, 35929012 - 35929117
Alignment:
Q  72 ttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaa 171  Q
    ||||||| ||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||| ||||| |||| |||| ||||    
T  35929012 ttcctcccgtctttattataagaaaaagttgattttttaggtttatagaataattaatgtatcttattataaatatagattagatacatcacttacacaa 35929111  T
Q  172 tgaacc 177  Q
    ||||||    
T  35929112 tgaacc 35929117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 77 - 176
Target Start/End: Complemental strand, 52966536 - 52966437
Alignment:
Q  77 ccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaac 176  Q
    |||||||||||||||||||| | |||||||||| |||||||||||||||||||| ||||| || |||||||||||||||| |||| ||||||||||||||    
T  52966536 ccggtccttattataagaaacaattgacttttttggttcatagaataattaatgcatcttgttataaatatagactagatacatcacttatacaatgaac 52966437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 80 - 219
Target Start/End: Complemental strand, 52136837 - 52136698
Alignment:
Q  80 gtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaaccnn 179  Q
    ||||||||||||||||| | |||| |||||  ||||||||||||||||||||||||| || ||||||||||||| || |||| |||| ||||||||||      
T  52136837 gtccttattataagaaacaattgatttttttagttcatagaataattaatgtatcttgttataaatatagactaaatacatcacttacacaatgaaccta 52136738  T
Q  180 nnnnnttaattgtctcttataataaggaccggagggagta 219  Q
         |||||| | ||||||||||||||||||||||||||    
T  52136737 aaaagttaattttttcttataataaggaccggagggagta 52136698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 74 - 220
Target Start/End: Original strand, 4418101 - 4418247
Alignment:
Q  74 cctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatg 173  Q
    ||||||||||||||||||||||| | |||| |||||  |||||||||||||||||||||| || || |||||||| |||| || |||| |||| ||||||    
T  4418101 cctccggtccttattataagaaacaattgatttttttagttcatagaataattaatgtattttgttataaatataaactaaatacatcacttacacaatg 4418200  T
Q  174 aaccnnnnnnnttaattgtctcttataataaggaccggagggagtac 220  Q
    ||||       | |||| | |||||||||||||||||||||||||||    
T  4418201 aacctaaaaaatcaattttttcttataataaggaccggagggagtac 4418247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 69 - 219
Target Start/End: Complemental strand, 25756861 - 25756711
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| ||||||||||||||||||||||| | ||||||||||| |||||| | |||||||||||||||  || |||||| ||||||||| |||| |||| |    
T  25756861 tactccctccggtccttattataagaaacaattgactttttatgttcattggataattaatgtatctcgttataaatagagactagatacatcacttaca 25756762  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    || ||||||       | |||| | ||||||||||||||||||||||||||    
T  25756761 cagtgaacctaaaaagtcaattatttcttataataaggaccggagggagta 25756711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 63 - 161
Target Start/End: Original strand, 24100752 - 24100850
Alignment:
Q  63 aaatattacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatc 161  Q
    |||||||||| |||||| |||||||||||||||| | || ||||||||| ||||| |||||||||||||||||| || |||||||||||||||| ||||    
T  24100752 aaatattactccctccgatccttattataagaaataattaactttttagattcattgaataattaatgtatcttgttataaatatagactagatacatc 24100850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 54673315 - 54673448
Alignment:
Q  75 ctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatga 174  Q
    |||||||||||||||||||||| | |||||||||||||||||| |||||| ||||| ||||  || |||||||||||||||| |||| |||| | |||||    
T  54673315 ctccggtccttattataagaaacatttgactttttaggttcattgaataagtaatgcatctcgttataaatatagactagatacatcacttacataatga 54673414  T
Q  175 accnnnnnnnttaattgtctcttataataaggac 208  Q
    |||       | |||||| |||||||||||||||    
T  54673415 acctaaaaagtcaattgtttcttataataaggac 54673448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 75 - 219
Target Start/End: Complemental strand, 19350753 - 19350611
Alignment:
Q  75 ctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatga 174  Q
    ||||||||||||||| || ||||||||||||||||||||| |||||||| ||||||| ||||||| |||||| ||||||||| | || |||| |||||||    
T  19350753 ctccggtccttattaaaaaaaaaagttgactttttaggtttatagaatacttaatgt-tcttattataaataaagactagatac-tcacttacacaatga 19350656  T
Q  175 accnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    |||       |||||||| ||||||||||| || |||||| ||||    
T  19350655 accaaaaaaattaattgtttcttataataaagatcggaggaagta 19350611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 69 - 219
Target Start/End: Complemental strand, 29686549 - 29686399
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| ||||||||||||||||||||||| | || | ||||||  ||||| | ||||||||||||| || || |||||||||||||||| ||||  ||| |    
T  29686549 tactccctccggtccttattataagaaacaattaattttttaaattcattgtataattaatgtatattgttataaatatagactagatacatcatttaca 29686450  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    |||||||||       | || ||| ||||||||||||||||||||||||||    
T  29686449 caatgaacctaaaaagtcaaatgtttcttataataaggaccggagggagta 29686399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 52278101 - 52278032
Alignment:
Q  84 ttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagacta 153  Q
    ||||||||||||||| |||||||||||| || |||||||||||||| |||||||||||||||||||||||    
T  52278101 ttattataagaaaaaattgactttttagatttatagaataattaatatatcttattgtaaatatagacta 52278032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 66 - 177
Target Start/End: Original strand, 31853063 - 31853174
Alignment:
Q  66 tattacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatccctt 165  Q
    ||||||| ||| || || ||||||||||||| | |||| |||||   |||||||||||||||||||||||| || |||||||||||||||| |||| |||    
T  31853063 tattactcccttcgatctttattataagaaataattgatttttttaattcatagaataattaatgtatcttgttataaatatagactagatacatcactt 31853162  T
Q  166 atacaatgaacc 177  Q
    | ||||||||||    
T  31853163 acacaatgaacc 31853174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 75 - 166
Target Start/End: Original strand, 42159978 - 42160069
Alignment:
Q  75 ctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatccctta 166  Q
    |||||||||||||||||||||| | |||| |||||  ||||||||||||||||||||||||| || ||||||||||||| || |||| ||||    
T  42159978 ctccggtccttattataagaaataattgattttttttgttcatagaataattaatgtatcttgttataaatatagactaaatacatcactta 42160069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 74 - 218
Target Start/End: Complemental strand, 56491216 - 56491072
Alignment:
Q  74 cctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatg 173  Q
    |||| ||||||||||||||| || |  |||||||||| |||||| |||||||||||||| ||  || |||||||||||||||| |||  |||||||||||    
T  56491216 cctcgggtccttattataagcaacaaatgactttttaagttcattgaataattaatgtacctcgttataaatatagactagatacattacttatacaatg 56491117  T
Q  174 aaccnnnnnnnttaattgtctcttataataaggaccggagggagt 218  Q
    ||||       | |||||   ||||||||||||||||||||||||    
T  56491116 aacctaaaaagtcaattgctgcttataataaggaccggagggagt 56491072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 69 - 214
Target Start/End: Complemental strand, 27587395 - 27587250
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| |||||| |||||||||||||||| | || | ||||||||||||| |||||||||||||||||  || |||||||| ||||||| ||||  |||||    
T  27587395 tactacctccgatccttattataagaaataatttattttttaggttcattgaataattaatgtatctcgttataaatatacactagatacatcatttata 27587296  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagg 214  Q
     ||| || |       | |||||| |||||||||||||||||||||    
T  27587295 taataaatctaaaaagtcaattgtttcttataataaggaccggagg 27587250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 103 - 175
Target Start/End: Complemental strand, 40592827 - 40592755
Alignment:
Q  103 actttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaa 175  Q
    |||||||||||| ||||||||||||||||||||| || |||||||| ||||||| |||| |||||||||||||    
T  40592827 actttttaggtttatagaataattaatgtatcttgttataaatataaactagatacatcacttatacaatgaa 40592755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 69 - 177
Target Start/End: Complemental strand, 9813605 - 9813497
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    ||||||||||| ||||||| ||||| || | ||||||||||||||| || | || ||||||| ||||  || |||||||||||||||| |||| |||| |    
T  9813605 tacttcctccgatccttataataagcaacaattgactttttaggtttattgcatgattaatgcatctcgttataaatatagactagatacatcacttaca 9813506  T
Q  169 caatgaacc 177  Q
    |||||||||    
T  9813505 caatgaacc 9813497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 52136692 - 52136746
Alignment:
Q  63 aaatattacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||||||||| ||||||||||||||||||||||||| || |||||||||||||||    
T  52136692 aaatattactccctccggtccttattataagaaaaaattaactttttaggttcat 52136746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 175
Target Start/End: Original strand, 1205091 - 1205187
Alignment:
Q  78 cggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaa 175  Q
    ||||| ||||||||| ||| | || ||||||| | ||| | ||||||||||||||||||||| |||||||||||||||| |||| |||| ||||||||    
T  1205091 cggtctttattataaaaaacaattaacttttttgattcgt-gaataattaatgtatcttattataaatatagactagatacatcacttagacaatgaa 1205187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 22210803 - 22210872
Alignment:
Q  84 ttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagacta 153  Q
    ||||||||||||| | |||||||||||  ||||| ||||||||||| |||||| ||||||||||||||||    
T  22210803 ttattataagaaacaattgactttttaaattcattgaataattaatatatcttgttgtaaatatagacta 22210872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 53225793 - 53225729
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtat 133  Q
    |||| |||||||||||  |||||||||||| |||||||||||| ||||| |||||||||||||||    
T  53225793 tactccctccggtcctatttataagaaaaaattgactttttagattcattgaataattaatgtat 53225729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 25756708 - 25756758
Alignment:
Q  66 tattacttcctccggtccttattataagaaaaagttgactttttaggttca 116  Q
    ||||||| ||||||||||||||||||||||| | |||||||||||||||||    
T  25756708 tattactccctccggtccttattataagaaataattgactttttaggttca 25756758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 70 - 151
Target Start/End: Original strand, 41116562 - 41116643
Alignment:
Q  70 acttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagac 151  Q
    |||||||||||||||  |||||||||||| || ||||||||| ||||| || ||||| |||||||||||   ||||||||||    
T  41116562 acttcctccggtcctatttataagaaaaatttaactttttagattcattgagtaattgatgtatcttatctaaaatatagac 41116643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 4418246 - 4418198
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||| ||||||||||||||||||||||||| |||| |||||||||||||    
T  4418246 tactccctccggtccttattataagaaaaaattgattttttaggttcat 4418198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 17316636 - 17316588
Alignment:
Q  62 taaatattacttcctccggtccttattataagaaaaagttgacttttta 110  Q
    |||||| |||| |||||||||||||||||||||||||||| ||||||||    
T  17316636 taaatactactccctccggtccttattataagaaaaagttaacttttta 17316588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 161
Target Start/End: Complemental strand, 23559051 - 23558963
Alignment:
Q  73 tcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatc 161  Q
    |||||||||| |||||||||| || | |||| |||||||| |||| | ||||||||| |||||  || |||||||||||||||| ||||    
T  23559051 tcctccggtctttattataagtaacaattgattttttaggctcattggataattaatatatctcgttataaatatagactagatacatc 23558963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 29686399 - 29686447
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||| ||||||||||||||||||||||| | ||||||||||||||||||    
T  29686399 tactccctccggtccttattataagaaacatttgactttttaggttcat 29686447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 74 - 117
Target Start/End: Original strand, 1100900 - 1100943
Alignment:
Q  74 cctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    ||||||||||||||||||||||| | ||||||||||||||||||    
T  1100900 cctccggtccttattataagaaacatttgactttttaggttcat 1100943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 76 - 175
Target Start/End: Original strand, 1140871 - 1140970
Alignment:
Q  76 tccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaa 175  Q
    ||||||| |||||| || ||| | |||| ||||||| ||||| |||||||| |||||| || || ||||||||||| |||| |||| |||| ||||||||    
T  1140871 tccggtcattattagaataaacaattgaatttttagattcattgaataattgatgtattttgttataaatatagaccagatacatcacttacacaatgaa 1140970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 136
Target Start/End: Complemental strand, 24100941 - 24100886
Alignment:
Q  81 tccttattataagaaaaagttgactttttaggttcatagaataattaatgtatctt 136  Q
    |||||||||||||||| | || ||||||||| ||||| ||||||||||||||||||    
T  24100941 tccttattataagaaataattaactttttagattcattgaataattaatgtatctt 24100886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 44111894 - 44111827
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatctt 136  Q
    |||| ||||||||| |  ||||||||||||||||||||||||| ||||| || ||||| |||||||||    
T  44111894 tactccctccggtcttatttataagaaaaagttgactttttagattcattgagtaattgatgtatctt 44111827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 126
Target Start/End: Original strand, 16412232 - 16412290
Alignment:
Q  68 ttacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataatt 126  Q
    |||||||||||||| ||  |||||||||||| |||||||||||| ||||| ||||||||    
T  16412232 ttacttcctccggttctatttataagaaaaaattgactttttagattcattgaataatt 16412290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 37895254 - 37895320
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatct 135  Q
    |||| ||||||||||||||||||||||| |||||| ||||| ||||||| | |||| | ||||||||    
T  37895254 tactccctccggtccttattataagaaacagttgatttttttggttcattgtataagtgatgtatct 37895320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 76 - 117
Target Start/End: Complemental strand, 7086273 - 7086232
Alignment:
Q  76 tccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    ||||||||||||||||||||| | ||||||||||||||||||    
T  7086273 tccggtccttattataagaaacatttgactttttaggttcat 7086232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 64 - 133
Target Start/End: Original strand, 48361046 - 48361115
Alignment:
Q  64 aatattacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtat 133  Q
    |||| |||| |||||||||||  |||||||||||| |||||||||||| ||||| || ||||| ||||||    
T  48361046 aataatactccctccggtcctatttataagaaaaatttgactttttagattcattgagtaattgatgtat 48361115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 56491076 - 56491137
Alignment:
Q  74 cctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatct 135  Q
    |||||||||||||||||||| |  | |||||||||||||||||| | |||| ||||||||||    
T  56491076 cctccggtccttattataagcagcaattgactttttaggttcattgtataagtaatgtatct 56491137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 32193474 - 32193522
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||| ||||||||||||||||||||||| | |||||||||| |||||||    
T  32193474 tactccctccggtccttattataagaaacaattgacttttttggttcat 32193522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 19150657 - 19150720
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgta 132  Q
    |||| ||| |||||||  ||||||||||||||||||||||||| || || || |||||||||||    
T  19150657 tactccctacggtcctatttataagaaaaagttgactttttagatttattgagtaattaatgta 19150720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 20459389 - 20459326
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgta 132  Q
    |||| |||||||||||  ||||||||||||||| ||||||||| |||||  ||||||| |||||    
T  20459389 tactacctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgta 20459326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 111
Target Start/End: Original strand, 27587248 - 27587287
Alignment:
Q  72 ttcctccggtccttattataagaaaaagttgactttttag 111  Q
    ||||||||||||||||||||||||| | ||||||||||||    
T  27587248 ttcctccggtccttattataagaaacaattgactttttag 27587287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 175
Target Start/End: Original strand, 28460756 - 28460851
Alignment:
Q  80 gtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaa 175  Q
    |||| ||||||||||||   |||| ||||||| |||||    |||||||| |||||| |||||||||||||||| || |||| |||||| ||||||    
T  28460756 gtccctattataagaaatttttgattttttagattcattatgtaattaatttatcttgttgtaaatatagactaaatacatcacttatataatgaa 28460851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 36196361 - 36196412
Alignment:
Q  66 tattacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    ||||||| ||||||||||||||||||||||| | |||| ||||| |||||||    
T  36196361 tattactccctccggtccttattataagaaacaattgatttttttggttcat 36196412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 42804255 - 42804318
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgta 132  Q
    |||| |||||||||||  ||||||||||||||| ||||||||| |||||  ||||||| |||||    
T  42804255 tactacctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgta 42804318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 47866035 - 47866098
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgta 132  Q
    |||| |||||||||||  ||||||||||||||| ||||||||| |||||  ||||||| |||||    
T  47866035 tactacctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgta 47866098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 117
Target Start/End: Complemental strand, 3740451 - 3740405
Alignment:
Q  71 cttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    ||||||||||||  || |||||| |||||||||||||||||||||||    
T  3740451 cttcctccggtcactaatataagcaaaagttgactttttaggttcat 3740405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 9894630 - 9894672
Alignment:
Q  75 ctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    ||||||||||  ||||||||||||||||||||||||| |||||    
T  9894630 ctccggtcctatttataagaaaaagttgactttttagattcat 9894672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 133
Target Start/End: Complemental strand, 21554239 - 21554193
Alignment:
Q  87 ttataagaaaaagttgactttttaggttcatagaataattaatgtat 133  Q
    ||||||||||||||||| ||||||| ||||| || ||||||||||||    
T  21554239 ttataagaaaaagttgattttttagattcattgagtaattaatgtat 21554193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 29686515 - 29686549
Alignment:
Q  185 ttaattgtctcttataataaggaccggagggagta 219  Q
    |||||||| ||||||||||||||||||||||||||    
T  29686515 ttaattgtttcttataataaggaccggagggagta 29686549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 117
Target Start/End: Complemental strand, 31853206 - 31853168
Alignment:
Q  79 ggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||| ||||||||||||||| ||||||||||||||||||    
T  31853206 ggtctttattataagaaaaatttgactttttaggttcat 31853168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 31854378 - 31854444
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatct 135  Q
    |||||| ||||||||| |||| |||| |||||||||||||||| | ||| |||||||  ||||||||    
T  31854378 tacttcatccggtcctaattacaagagaaagttgactttttagatacattgaataatgtatgtatct 31854444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 111
Target Start/End: Complemental strand, 42160122 - 42160080
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttag 111  Q
    |||||||||||||| ||||||||||||| | ||||||||||||    
T  42160122 tacttcctccggtctttattataagaaacatttgactttttag 42160080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 132
Target Start/End: Original strand, 43020760 - 43020818
Alignment:
Q  74 cctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgta 132  Q
    |||||||||||  ||||||||||||||| ||||||||| |||||  ||||||| |||||    
T  43020760 cctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgta 43020818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 223
Target Start/End: Original strand, 5813690 - 5813719
Alignment:
Q  194 tcttataataaggaccggagggagtactat 223  Q
    ||||||||||||||||||||||||||||||    
T  5813690 tcttataataaggaccggagggagtactat 5813719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 117
Target Start/End: Complemental strand, 28815925 - 28815880
Alignment:
Q  72 ttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    ||||| |||||  ||||||||| |||||||||||||||||||||||    
T  28815925 ttccttcggtcactattataagcaaaagttgactttttaggttcat 28815880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 43141770 - 43141831
Alignment:
Q  74 cctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatct 135  Q
    ||||||||||||||||||||||| | || ||||||| ||||||| | |||| | ||||||||    
T  43141770 cctccggtccttattataagaaacaattaacttttttggttcattgtataagtgatgtatct 43141831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 54673448 - 54673411
Alignment:
Q  80 gtccttattataagaaaaagttgactttttaggttcat 117  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  54673448 gtccttattataagaaacaattgactttttaggttcat 54673411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 54864208 - 54864147
Alignment:
Q  74 cctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatct 135  Q
    ||||||||||||||||||||||| | || ||||||| ||||||| | |||| | ||||||||    
T  54864208 cctccggtccttattataagaaacaattaacttttttggttcattgtataagtgatgtatct 54864147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 3094411 - 3094363
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||| |||||||||  ||||||||  |||||||||||||||||||||||    
T  3094411 tactccctccggtcactattataaccaaaagttgactttttaggttcat 3094363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 219
Target Start/End: Original strand, 25756829 - 25756861
Alignment:
Q  187 aattgtctcttataataaggaccggagggagta 219  Q
    |||||| ||||||||||||||||||||||||||    
T  25756829 aattgtttcttataataaggaccggagggagta 25756861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 28020621 - 28020585
Alignment:
Q  74 cctccggtccttattataagaaaaagttgacttttta 110  Q
    ||||||||| || ||||||||||||||||||||||||    
T  28020621 cctccggtcatttttataagaaaaagttgacttttta 28020585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 75 - 135
Target Start/End: Original strand, 32517775 - 32517835
Alignment:
Q  75 ctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatct 135  Q
    ||||||||||  |||||||| |||||||||||||||| | ||| |||||||  ||||||||    
T  32517775 ctccggtcctatttataagagaaagttgactttttagatacattgaataatatatgtatct 32517835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 194 - 222
Target Start/End: Complemental strand, 33615803 - 33615775
Alignment:
Q  194 tcttataataaggaccggagggagtacta 222  Q
    |||||||||||||||||||||||||||||    
T  33615803 tcttataataaggaccggagggagtacta 33615775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 33622879 - 33622927
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||| ||||||||||||||||||||||| | || ||||||| |||||||    
T  33622879 tactccctccggtccttattataagaaacaattaacttttttggttcat 33622927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 97
Target Start/End: Original strand, 34319502 - 34319530
Alignment:
Q  69 tacttcctccggtccttattataagaaaa 97  Q
    |||||||||||||||||||||||||||||    
T  34319502 tacttcctccggtccttattataagaaaa 34319530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 48196039 - 48195991
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    ||||||||||||||||  |||||||||| | |||||||||| |||||||    
T  48196039 tacttcctccggtcctatttataagaaacatttgacttttttggttcat 48195991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 108; Significance: 5e-54; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 63 - 219
Target Start/End: Original strand, 34604774 - 34604930
Alignment:
Q  63 aaatattacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcc 162  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||     
T  34604774 aaataatactccctccggtccttattataagaaaaagttgactttttaggttcatagaataaataatgtatcttattgtaaatatagactagatacatca 34604873  T
Q  163 cttatacaatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    |||||||||||||||       | |||||| ||||||||||||||||||||||||||    
T  34604874 cttatacaatgaaccaaaaaaatcaattgtttcttataataaggaccggagggagta 34604930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 69 - 219
Target Start/End: Complemental strand, 13832024 - 13831874
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||    
T  13832024 tactccctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactatatacatcacttata 13831925  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    |||||||||       |||||||| ||||||||||||||||| ||||||||    
T  13831924 caatgaaccaaaaaagttaattgtttcttataataaggaccgaagggagta 13831874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 69 - 219
Target Start/End: Original strand, 35583882 - 35584032
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| ||||| |||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||    
T  35583882 tactccctccagtccttattataagaaaaatatgaccttttaggttcatagaataattaatgtatcttattgtaaatatagattagatacatcacttata 35583981  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    |||||||||       |||||||| ||||||||||||||||||||||||||    
T  35583982 caatgaaccaaaaaagttaattgtttcttataataaggaccggagggagta 35584032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 80 - 219
Target Start/End: Original strand, 29690446 - 29690585
Alignment:
Q  80 gtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaaccnn 179  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||      
T  29690446 gtccttattataagaaaaaactgactttttaggttcatagaataattaatgtatcttattataaatatagactagatacatcacttatacaatgaaccaa 29690545  T
Q  180 nnnnnttaattgtctcttataataaggaccggagggagta 219  Q
         |||||||| ||||||||||||||||||||| ||||    
T  29690546 aaaagttaattgtttcttataataaggaccggaggaagta 29690585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 69 - 219
Target Start/End: Complemental strand, 7548647 - 7548496
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgacttttt-aggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttat 167  Q
    |||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||| ||| || |||| ||||     
T  7548647 tactccctccggtccttattataagaaaaagttgatttttttaggttcatagaataattaatgcatcttattgtaaatatagtctaaatacatcacttac 7548548  T
Q  168 acaatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    ||||||||||       |||||||| ||||||||||||||||||||||||||    
T  7548547 acaatgaaccaaaaaaattaattgtttcttataataaggaccggagggagta 7548496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 69 - 219
Target Start/End: Original strand, 45372704 - 45372854
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||| |    
T  45372704 tactccctccggtccttaatataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgaaaatatagactagatacatcacttaca 45372803  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    || |||| |       | ||||||  |||||||||||||||||||||||||    
T  45372804 cattgaatcaaaaaagtcaattgttacttataataaggaccggagggagta 45372854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 69 - 219
Target Start/End: Complemental strand, 43932198 - 43932048
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| ||||||||||||||||||||||| | |||||||||||| ||||| |||||||||||||||||| || |||||||||| ||||| ||||  || ||    
T  43932198 tactccctccggtccttattataagaaacaattgactttttagattcattgaataattaatgtatcttgttataaatatagattagatacatcatttgta 43932099  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    |||||||||       | |||||| ||||||||||||||||||||||||||    
T  43932098 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 43932048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 80 - 156
Target Start/End: Complemental strand, 44580031 - 44579955
Alignment:
Q  80 gtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagat 156  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44580031 gtccttattataagaaaaagttgactttttaagttcatagaataattaatgtatcttattgtaaatatagactagat 44579955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 69 - 219
Target Start/End: Original strand, 43292567 - 43292717
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| ||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||| || |||||||||||||||| |||| |||| |    
T  43292567 tactccctccggtccttattataagaaacaattgacttttttggttcatagaataattaatgtatcttgttataaatatagactagatacatcacttaca 43292666  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
     ||||||||       | || ||| |||||||||||||||| || ||||||    
T  43292667 taatgaacctaaaaagtcaaatgtttcttataataaggaccagatggagta 43292717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 69 - 175
Target Start/End: Original strand, 34745256 - 34745362
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| ||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||| || |||||||||||||||| |||| |||| |    
T  34745256 tactccctccggtccttattataagaaacaattgacttttttggttcatagaataattaatgtatcttgttataaatatagactagatacatcacttaca 34745355  T
Q  169 caatgaa 175  Q
     ||||||    
T  34745356 taatgaa 34745362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 69 - 219
Target Start/End: Complemental strand, 43409983 - 43409833
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| ||||||||||||||||| || || |  ||||||||| ||||||| |||||||||||||| ||  || |||||||||||||||| |||  ||||||    
T  43409983 tactccctccggtccttattattagcaacaaatgactttttcggttcattgaataattaatgtacctcgttataaatatagactagatacattacttata 43409884  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    |||||||||       | |||||   |||||||||||||||||||||||||    
T  43409883 caatgaacctaaaaagtcaattgctgcttataataaggaccggagggagta 43409833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 9633089 - 9633167
Alignment:
Q  78 cggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagat 156  Q
    ||||||||||||||||||| | ||||| |||||| ||||| | |||||||||||||||| || ||||||||||||||||    
T  9633089 cggtccttattataagaaacaattgacgttttagattcattgtataattaatgtatcttgttataaatatagactagat 9633167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 38298632 - 38298543
Alignment:
Q  87 ttataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaac 176  Q
    |||||||||| | |||| ||||||||||||| |||||||||||||||||  || ||||||||| |||||| |||| |||| |||||||||    
T  38298632 ttataagaaacaattgattttttaggttcattgaataattaatgtatctcgttataaatataggctagatacatcacttacacaatgaac 38298543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 10839757 - 10839825
Alignment:
Q  64 aatattacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgta 132  Q
    ||||||||||||||| |||||  |||||||||||| |||||||||||| ||||| ||||||||||||||    
T  10839757 aatattacttcctccagtcctatttataagaaaaaattgactttttagattcattgaataattaatgta 10839825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 177
Target Start/End: Original strand, 38494253 - 38494346
Alignment:
Q  84 ttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaacc 177  Q
    ||||||||||||| | ||||||||||  ||||||||||||||||||||||||| || |||||||| | ||||| || | |||| ||||| ||||    
T  38494253 ttattataagaaataattgactttttttgttcatagaataattaatgtatcttgttataaatataaattagatacaccacttacacaataaacc 38494346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 75 - 175
Target Start/End: Original strand, 24599674 - 24599774
Alignment:
Q  75 ctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatga 174  Q
    |||||||| ||||||||||||| | |||||||||||  ||||| |||||| |||||||| | ||| |||||||||  ||||| ||||  |||||||||||    
T  24599674 ctccggtctttattataagaaataattgactttttaaattcattgaataaataatgtatttcattataaatataggttagatacatcagttatacaatga 24599773  T
Q  175 a 175  Q
    |    
T  24599774 a 24599774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 40645813 - 40645752
Alignment:
Q  115 catagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaac 176  Q
    |||||||||||||||||||||| || |||||||||||||||| |||| |||| | |||||||    
T  40645813 catagaataattaatgtatcttgttataaatatagactagatacatcacttacataatgaac 40645752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 43932048 - 43932096
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||| ||||||||||||||||||||||| | ||||||||||||||||||    
T  43932048 tactccctccggtccttattataagaaacaattgactttttaggttcat 43932096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 172
Target Start/End: Original strand, 5356792 - 5356895
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    ||||| || |||||||||||||||| || | |||||||||||| ||||| | |||||||| | ||||  || ||||||| || ||||| |||| ||||||    
T  5356792 tactttcttcggtccttattataagcaacaattgactttttagattcattggataattaacgcatctcgttataaatatggattagatacatcacttata 5356891  T
Q  169 caat 172  Q
    ||||    
T  5356892 caat 5356895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 29690586 - 29690519
Alignment:
Q  68 ttacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatct 135  Q
    ||||||||||||||||||||||||||||| | || ||||||| ||||||| | |||| | ||||||||    
T  29690586 ttacttcctccggtccttattataagaaacaattaacttttttggttcattgtataagtgatgtatct 29690519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 35794675 - 35794608
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatctt 136  Q
    |||| |||||||||||||||||||||||   || ||||||||| ||||| || |||||||||||||||    
T  35794675 tactccctccggtccttattataagaaactttttactttttagattcattgagtaattaatgtatctt 35794608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 40645702 - 40645757
Alignment:
Q  62 taaatattacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||||| |||||||||| ||||||||||||||||| | ||||||||||| ||||||    
T  40645702 taaataatacttcctccagtccttattataagaaacatttgactttttaagttcat 40645757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 43409833 - 43409899
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatct 135  Q
    |||| |||||||||||||||||||| |  | |||||||||||||||||| | |||| ||||||||||    
T  43409833 tactccctccggtccttattataagcagcaattgactttttaggttcattgtataagtaatgtatct 43409899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 76 - 133
Target Start/End: Complemental strand, 7693175 - 7693118
Alignment:
Q  76 tccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtat 133  Q
    |||||||||  |||||||||||| |||||||||||| ||||| || ||||||||||||    
T  7693175 tccggtcctatttataagaaaaaattgactttttagattcattgagtaattaatgtat 7693118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 82 - 175
Target Start/End: Complemental strand, 9550245 - 9550152
Alignment:
Q  82 ccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaa 175  Q
    ||||||||||||||| | |||||||||||  || || |||||| ||||||||||  |  |||||||||||||||| |||| ||||  |||||||    
T  9550245 ccttattataagaaacaattgactttttaaatttattgaataactaatgtatctcgtaataaatatagactagatacatcacttacccaatgaa 9550152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 24822867 - 24822808
Alignment:
Q  74 cctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtat 133  Q
    |||||||||||  |||||||||||| |||||||||||| || || | |||||||||||||    
T  24822867 cctccggtcctatttataagaaaaaattgactttttagatttattgtataattaatgtat 24822808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 35011211 - 35011274
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgta 132  Q
    |||| |||||||||||  ||||||||||||||| | ||||||| |||||  |||||||||||||    
T  35011211 tactacctccggtcctatttataagaaaaagttaattttttagattcattcaataattaatgta 35011274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 34604930 - 34604864
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatct 135  Q
    |||| ||||||||||||||||||||||| | |||| ||||| ||||||| | |||| | ||||||||    
T  34604930 tactccctccggtccttattataagaaacaattgatttttttggttcattgtataagtgatgtatct 34604864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 35584032 - 35583966
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatct 135  Q
    |||| ||||||||||||||||||||||| | || ||||||| ||||||| | |||| | ||||||||    
T  35584032 tactccctccggtccttattataagaaacaattaacttttttggttcattgtataagtgatgtatct 35583966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 117
Target Start/End: Complemental strand, 43292707 - 43292669
Alignment:
Q  79 ggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  43292707 ggtccttattataagaaacatttgactttttaggttcat 43292669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 136
Target Start/End: Original strand, 1223116 - 1223189
Alignment:
Q  63 aaatattacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatctt 136  Q
    ||||| |||| ||||||||| |  ||||||||||||  ||||||||||| ||||| |  |||||||||||||||    
T  1223116 aaataatactccctccggtcatatttataagaaaaaagtgactttttagattcattgtgtaattaatgtatctt 1223189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 5031461 - 5031530
Alignment:
Q  67 attacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatctt 136  Q
    ||||||||||||||||||  |||||||||||| || ||||||||  |||||  | ||||| |||||||||    
T  5031461 attacttcctccggtcctatttataagaaaaatttaactttttaaattcattaagtaattgatgtatctt 5031530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 22429532 - 22429597
Alignment:
Q  67 attacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgta 132  Q
    |||||| |||||||||||  ||||||||||||||| | ||||||| || ||  |||||||||||||    
T  22429532 attactacctccggtcctatttataagaaaaagttaattttttagatttattcaataattaatgta 22429597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 10184700 - 10184636
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtat 133  Q
    ||||||||||| || |  |||||||||||| | |||||||||| ||||| |||||||| ||||||    
T  10184700 tacttcctccgatcatatttataagaaaaaatcgactttttagattcattgaataattgatgtat 10184636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 24177971 - 24178019
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||| |||||||||||  ||||||||||||||| ||||||||| |||||    
T  24177971 tactacctccggtcctatttataagaaaaagttaactttttagattcat 24178019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 219
Target Start/End: Complemental strand, 34745288 - 34745256
Alignment:
Q  187 aattgtctcttataataaggaccggagggagta 219  Q
    |||||| ||||||||||||||||||||||||||    
T  34745288 aattgtttcttataataaggaccggagggagta 34745256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 219
Target Start/End: Complemental strand, 43292599 - 43292567
Alignment:
Q  187 aattgtctcttataataaggaccggagggagta 219  Q
    |||||| ||||||||||||||||||||||||||    
T  43292599 aattgtttcttataataaggaccggagggagta 43292567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 43332566 - 43332626
Alignment:
Q  76 tccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatctt 136  Q
    |||||||||  |||||||||||  |||||||||||| ||||| || |||||||| ||||||    
T  43332566 tccggtcctatttataagaaaattttgactttttagattcattgagtaattaatatatctt 43332626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 219
Target Start/End: Original strand, 43932166 - 43932198
Alignment:
Q  187 aattgtctcttataataaggaccggagggagta 219  Q
    |||||| ||||||||||||||||||||||||||    
T  43932166 aattgtttcttataataaggaccggagggagta 43932198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 44796348 - 44796404
Alignment:
Q  76 tccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgta 132  Q
    |||||||||  ||||||||||||||| ||||||||| |||||  ||||||| |||||    
T  44796348 tccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgta 44796404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 107; Significance: 2e-53; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 64 - 219
Target Start/End: Original strand, 41487785 - 41487940
Alignment:
Q  64 aatattacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatccc 163  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |    
T  41487785 aataatactccctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatacatcac 41487884  T
Q  164 ttatacaatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    ||| ||||||||||       | |||||| ||||||||||||||||||||||||||    
T  41487885 ttacacaatgaaccaaaaaaatcaattgtttcttataataaggaccggagggagta 41487940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 69 - 219
Target Start/End: Complemental strand, 41395811 - 41395661
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||| |||| ||||||    
T  41395811 tacttccttcggttcttattataagaaaaagttgactttttagattcatagaataattaatatatcttattataaatatagactagatacatcacttata 41395712  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    |||||||         |||||||| |||||||||||||| |||| ||||||    
T  41395711 caatgaattaaaaaagttaattgtttcttataataaggatcggaaggagta 41395661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 69 - 175
Target Start/End: Complemental strand, 47484170 - 47484064
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||      
T  47484170 tactccctcctgtccttattataagtaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatacatcacttacg 47484071  T
Q  169 caatgaa 175  Q
    |||||||    
T  47484070 caatgaa 47484064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 12806907 - 12807004
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatccctta 166  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||| ||||    
T  12806907 tactccctccggtccttattataagaaaaagttgactttttaggttcataaaataattaatgtatcttattgtaaatatagactacatacatcactta 12807004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 69 - 219
Target Start/End: Original strand, 27320293 - 27320443
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| ||||| ||||||||||||||||||||||||||||||| ||||||| ||||||| || |||||||||||||||||||||||||  |||  ||||||    
T  27320293 tactccctcccgtccttattataagaaaaagttgactttttaagttcataaaataattgatatatcttattgtaaatatagactagaaacattacttata 27320392  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    |||||||||       | |||||| |||||||||||||||| |||||||||    
T  27320393 caatgaaccaaaaaaatcaattgtttcttataataaggaccagagggagta 27320443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 69 - 176
Target Start/End: Original strand, 18064721 - 18064828
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| ||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||| |||| |    
T  18064721 tactccctccggtccttaatataagaaaaagttaactttttaagttcatagaataattaatgtatcttattgaaaatatagactagatacatcacttaaa 18064820  T
Q  169 caatgaac 176  Q
    ||||||||    
T  18064821 caatgaac 18064828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 40198602 - 40198700
Alignment:
Q  68 ttacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatccctta 166  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| || |||| ||||    
T  40198602 ttactccctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgcatcttgttgtaaatatagactaaatacatcgctta 40198700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 74 - 175
Target Start/End: Original strand, 45123249 - 45123350
Alignment:
Q  74 cctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatg 173  Q
    ||||||||||||| ||||| |||||||||||||||||  ||||||||||||||||||||||||||| |||||||||| ||||| |||| |||||||||||    
T  45123249 cctccggtccttactataaaaaaaagttgactttttaaattcatagaataattaatgtatcttattataaatatagattagatacatcacttatacaatg 45123348  T
Q  174 aa 175  Q
    ||    
T  45123349 aa 45123350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 37006611 - 37006502
Alignment:
Q  64 aatattacttcctccggtccttattataagaaaaag-ttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcc 162  Q
    |||| |||||| |||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||| ||||||||||||| ||| ||| ||||     
T  37006611 aataatacttcatccggtccttattataagaaaaaaattgactttttaagttcatagaataattaatgtatcatattgtaaatataaactggatacatca 37006512  T
Q  163 cttatacaat 172  Q
    ||||||||||    
T  37006511 cttatacaat 37006502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 74 - 219
Target Start/End: Original strand, 24164520 - 24164665
Alignment:
Q  74 cctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatg 173  Q
    ||||||||||||||||||||||| | |||| ||||| |||||||||||||||||||||||||| ||  ||||||||||||||| |||| |||| | ||||    
T  24164520 cctccggtccttattataagaaacaattgatttttttggttcatagaataattaatgtatcttgttagaaatatagactagatacatcacttacataatg 24164619  T
Q  174 aaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    ||||       | || ||| |||||||||||||| |||||||||||    
T  24164620 aacctaaaaagtcaaatgtttcttataataaggatcggagggagta 24164665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 94 - 219
Target Start/End: Complemental strand, 47280297 - 47280173
Alignment:
Q  94 aaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaaccnnnnnnnttaattgtc 193  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||   |||||||||||| |       ||||||||     
T  47280297 aaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactaaatacattatttatacaatgaa-caaaaaagttaattgtt 47280199  T
Q  194 tcttataataaggaccggagggagta 219  Q
    ||||||||||| || |||||||||||    
T  47280198 tcttataataaagatcggagggagta 47280173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 67 - 219
Target Start/End: Original strand, 47612287 - 47612439
Alignment:
Q  67 attacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatccctta 166  Q
    |||||| ||||||||||||||||| || || |  ||||||||||||||||| |||||||||||||||||  || |||||||||||||||| |||  ||||    
T  47612287 attactccctccggtccttattattagcaacaaatgactttttaggttcattgaataattaatgtatctcgttataaatatagactagatacattactta 47612386  T
Q  167 tacaatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    |||||||||||       | |||||   |||||||||||||||||||||||||    
T  47612387 tacaatgaacctaaaaagtcaattgctgcttataataaggaccggagggagta 47612439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 76 - 219
Target Start/End: Original strand, 22618169 - 22618312
Alignment:
Q  76 tccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaa 175  Q
    |||| ||||||||||||||||   |||| ||||||| ||||| || ||||||||||||||| ||||||||||||||||||| |||| |||| ||||||||    
T  22618169 tccgttccttattataagaaatttttgattttttagattcattgagtaattaatgtatcttgttgtaaatatagactagatacatcacttacacaatgaa 22618268  T
Q  176 ccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    ||       | |||||| |||||||||||||||||||| |||||    
T  22618269 cctaaaaagtcaattgtttcttataataaggaccggagtgagta 22618312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 75 - 175
Target Start/End: Original strand, 45025599 - 45025699
Alignment:
Q  75 ctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatga 174  Q
    |||||||||||||||||||||| | |||| ||||| |||||||||||||||||||||||||| || |||||||||||||||| |||| |||| | |||||    
T  45025599 ctccggtccttattataagaaacaattgatttttttggttcatagaataattaatgtatcttgttataaatatagactagatacatcacttacataatga 45025698  T
Q  175 a 175  Q
    |    
T  45025699 a 45025699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 68 - 216
Target Start/End: Original strand, 10674121 - 10674269
Alignment:
Q  68 ttacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttat 167  Q
    ||||| |||||||| |||||||||| ||| | |||||||||||||||||| |||||||||||||||||| || |||||||||| ||||| |||| ||||     
T  10674121 ttactccctccggtacttattataaaaaacatttgactttttaggttcattgaataattaatgtatcttgttataaatatagattagatacatcacttac 10674220  T
Q  168 acaatgaaccnnnnnnnttaattgtctcttataataaggaccggaggga 216  Q
    | |||||| |       | |||||| |||||||||||||| ||||||||    
T  10674221 ataatgaatctaaaaagtcaattgtttcttataataaggatcggaggga 10674269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 24932382 - 24932446
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtat 133  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24932382 tacttccttcggtccttattataagaaaaaattgactttttaggttcatagaataattaatgtat 24932446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 66 - 214
Target Start/End: Original strand, 41088848 - 41088996
Alignment:
Q  66 tattacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatccctt 165  Q
    ||||||| |||||||||||||||| |||||| | |||||||||||| ||||| ||||||||||||||| |  || |||||||||||||||| |||  |||    
T  41088848 tattactccctccggtccttattacaagaaacaattgactttttagattcattgaataattaatgtatttcgttataaatatagactagatacattactt 41088947  T
Q  166 atacaatgaaccnnnnnnnttaattgtctcttataataaggaccggagg 214  Q
    | || || ||||       | |||||| |||||||||||||||||||||    
T  41088948 acacgattaacctaaaaagtcaattgtttcttataataaggaccggagg 41088996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 59 - 161
Target Start/End: Original strand, 33901027 - 33901129
Alignment:
Q  59 ttttaaatattacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgc 158  Q
    ||||||||| |||| ||||| ||||||||||||||||| | |||| ||||| | ||||||||||| |||||||||||| || |||||||||||||||| |    
T  33901027 ttttaaatagtactccctcctgtccttattataagaaacaattgatttttttgattcatagaatagttaatgtatcttgttataaatatagactagatac 33901126  T
Q  159 atc 161  Q
    |||    
T  33901127 atc 33901129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 61 - 161
Target Start/End: Complemental strand, 13860374 - 13860274
Alignment:
Q  61 ttaaatattacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcat 160  Q
    |||| ||||| | |||||| |||||||||||||||| | |||||||||||| ||||| | ||||||||||||| || || |||||||||||||||| |||    
T  13860374 ttaattattattccctccgatccttattataagaaacaattgactttttagattcattgtataattaatgtatattgttataaatatagactagatacat 13860275  T
Q  161 c 161  Q
    |    
T  13860274 c 13860274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 69 - 154
Target Start/End: Original strand, 48948941 - 48949028
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgact--ttttaggttcatagaataattaatgtatcttattgtaaatatagactag 154  Q
    ||||| |||||||||||||||||||||| | || |||  |||| |||||||||||||||||||||||||| || ||||||||||||||    
T  48948941 tactttctccggtccttattataagaaataattaactcttttttggttcatagaataattaatgtatcttgttataaatatagactag 48949028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 100 - 175
Target Start/End: Complemental strand, 7456537 - 7456462
Alignment:
Q  100 ttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaa 175  Q
    |||||||||||| ||||| || ||||||||||||||| ||||||||||||||||||| ||||  ||||||||||||    
T  7456537 ttgactttttagattcattgagtaattaatgtatcttgttgtaaatatagactagatacatcatttatacaatgaa 7456462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 79 - 219
Target Start/End: Complemental strand, 29559576 - 29559436
Alignment:
Q  79 ggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaaccn 178  Q
    ||||||||||| |||||| | |||||||||||| ||||| ||||||||||||||| |  || |||||||||||||||| |||  |||| || |||||||     
T  29559576 ggtccttattacaagaaacaattgactttttagattcattgaataattaatgtatttcgttataaatatagactagatacattacttacacgatgaacct 29559477  T
Q  179 nnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
          | |||||| |||||||||||||| |||||| ||||    
T  29559476 aaaaagtcaattgtttcttataataaggatcggaggtagta 29559436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 81 - 177
Target Start/End: Complemental strand, 33039699 - 33039601
Alignment:
Q  81 tccttattataagaaaaagttgactttttaggttcata--gaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaacc 177  Q
    |||||||| |||| || | ||||||||||||||| |||  |||||||||||||||| | ||||||||||||||||||| ||||||| | ||||||||||    
T  33039699 tccttattttaaggaacaattgactttttaggtttatatagaataattaatgtatcatgttgtaaatatagactagatacatccctaacacaatgaacc 33039601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 66 - 136
Target Start/End: Complemental strand, 10007728 - 10007658
Alignment:
Q  66 tattacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatctt 136  Q
    ||||||| |||||||||||  ||||||||||||||||||||||||| ||||| | ||||||||||||||||    
T  10007728 tattactccctccggtcctatttataagaaaaagttgactttttagattcattgtataattaatgtatctt 10007658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 177
Target Start/End: Complemental strand, 7999566 - 7999489
Alignment:
Q  100 ttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaacc 177  Q
    ||||||||||||||||||  ||||||||||| ||||  || |||||||||||||||| |||| |||| ||||||||||    
T  7999566 ttgactttttaggttcattaaataattaatgcatctcgttataaatatagactagatacatcacttacacaatgaacc 7999489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 14543267 - 14543364
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatccctta 166  Q
    |||| ||||| ||| |||||||||||||   |||| ||||||| ||||| || |||||||||||||||  |||||||||||||||||| |||| ||||    
T  14543267 tactccctcctgtctttattataagaaacttttgattttttagattcattgagtaattaatgtatcttgatgtaaatatagactagatacatcactta 14543364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 79 - 212
Target Start/End: Complemental strand, 3633330 - 3633197
Alignment:
Q  79 ggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaaccn 178  Q
    |||||||||||||||||| | |||||||||||||||||| |  ||| | ||||||||  || ||||| |||||||||| |||| |||| | ||||||||     
T  3633330 ggtccttattataagaaatatttgactttttaggttcattgtttaagtgatgtatctcgttataaatgtagactagatacatcacttaaataatgaacct 3633231  T
Q  179 nnnnnnttaattgtctcttataataaggaccgga 212  Q
          | || ||| |||||||||||||||||||    
T  3633230 aaaaagtcaaatgtttcttataataaggaccgga 3633197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 80 - 172
Target Start/End: Original strand, 28248441 - 28248533
Alignment:
Q  80 gtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaat 172  Q
    ||||||||||||||||| | ||||| |||||| ||||| |||||||||||| ||||  || ||||||||||||| || |||| |||| |||||    
T  28248441 gtccttattataagaaacaattgacattttagattcattgaataattaatgcatctcgttataaatatagactatatacatcacttacacaat 28248533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 2523919 - 2523856
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgta 132  Q
    |||| |||||||||||  ||||||||||||||||||||||||| ||||| || |||||||||||    
T  2523919 tactccctccggtcctatttataagaaaaagttgactttttagattcattgagtaattaatgta 2523856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 219
Target Start/End: Complemental strand, 40234917 - 40234765
Alignment:
Q  67 attacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatccctta 166  Q
    |||||| ||| || || |||||||||||||   ||| ||| |||  ||||| || ||||| ||||||||| ||||||||||||||||||| ||||  |||    
T  40234917 attactcccttcgatctttattataagaaatttttgtcttcttaaattcattgagtaattcatgtatcttgttgtaaatatagactagatacatcagtta 40234818  T
Q  167 tacaatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
     |||||||| |       | |||||| |||||||||||| |||||||||||||    
T  40234817 cacaatgaatctaaaaagtcaattgtttcttataataagaaccggagggagta 40234765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 39413858 - 39413934
Alignment:
Q  100 ttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaac 176  Q
    |||||||||||  || || |||||||||||||||| | |||||||||| || ||||| |||| ||||||||||||||    
T  39413858 ttgactttttatattaattgaataattaatgtatcatgttgtaaatattgattagatacatcacttatacaatgaac 39413934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 29559435 - 29559502
Alignment:
Q  68 ttacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatct 135  Q
    ||||| |||||| |||||||||||||||| | |||||||||||||||||| |  ||| ||||||||||    
T  29559435 ttactacctccgatccttattataagaaacaattgactttttaggttcatcgtgtaagtaatgtatct 29559502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 40234758 - 40234813
Alignment:
Q  62 taaatattacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    ||||||||||| |||||||| |||||||||||||| | |||||||||||| |||||    
T  40234758 taaatattactccctccggttcttattataagaaacaattgactttttagattcat 40234813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 22618306 - 22618264
Alignment:
Q  75 ctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||||||||||||||||||||| | ||||||||||||||||||    
T  22618306 ctccggtccttattataagaaacaattgactttttaggttcat 22618264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 47612439 - 47612373
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatct 135  Q
    |||| |||||||||||||||||||| |  | |||||||||||||||||| | |||| ||||||||||    
T  47612439 tactccctccggtccttattataagcagcaattgactttttaggttcattgtataagtaatgtatct 47612373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 3633197 - 3633238
Alignment:
Q  76 tccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    ||||||||||||||||||||| | ||||||||||||||||||    
T  3633197 tccggtccttattataagaaacatttgactttttaggttcat 3633238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 11668166 - 11668097
Alignment:
Q  67 attacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatctt 136  Q
    |||||||||| |||||||  |||||||||||| |||||||||||  ||||| || ||||| |||||||||    
T  11668166 attacttccttcggtcctatttataagaaaaatttgactttttacattcattgattaattgatgtatctt 11668097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 24932484 - 24932525
Alignment:
Q  185 ttaattgtctcttataataaggaccggagggagtactatatt 226  Q
    ||||||||||||||||||||||| |||||||||||| |||||    
T  24932484 ttaattgtctcttataataaggatcggagggagtacaatatt 24932525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 41088996 - 41088935
Alignment:
Q  74 cctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatct 135  Q
    ||||||||||||||||||||||| | ||||||||||||||| || |  ||| ||||||||||    
T  41088996 cctccggtccttattataagaaacaattgactttttaggttaatcgtgtaagtaatgtatct 41088935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 135
Target Start/End: Original strand, 7456424 - 7456484
Alignment:
Q  75 ctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatct 135  Q
    |||||||||||||||||||||| | |||||||||||| ||||| | |||| | ||||||||    
T  7456424 ctccggtccttattataagaaatatttgactttttagattcattgtataaatgatgtatct 7456484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 24164665 - 24164617
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||| |||||| |||||||||||||||| | ||||||||||||||||||    
T  24164665 tactccctccgatccttattataagaaacatttgactttttaggttcat 24164617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 81 - 161
Target Start/End: Complemental strand, 31903087 - 31903007
Alignment:
Q  81 tccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatc 161  Q
    |||||||||||| ||| | || | ||||||||||||| ||||||||||||||| |  |  |||||||||||||||| ||||    
T  31903087 tccttattataaaaaataattaattttttaggttcattgaataattaatgtatttcgtcataaatatagactagatacatc 31903007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 33901187 - 33901139
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||||||||||||| ||||||||||||| | |||||||||||| |||||    
T  33901187 tacttcctccggtctttattataagaaacatttgactttttagattcat 33901139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 13807235 - 13807298
Alignment:
Q  63 aaatattacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataatt 126  Q
    ||||| |||| ||||||||| |  ||||||||||||||||||||||||| ||||| || |||||    
T  13807235 aaatactactccctccggtcttatttataagaaaaagttgactttttagattcattgagtaatt 13807298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 27231982 - 27231919
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgta 132  Q
    |||| |||||||||||  ||||||||||||||| ||||||||| |||||  ||||||| |||||    
T  27231982 tactacctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgta 27231919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 36245525 - 36245458
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatctt 136  Q
    |||| ||||| |||||  |||||||||||| |||||||||||| ||||| || ||||| |||||||||    
T  36245525 tactccctcctgtcctatttataagaaaaaattgactttttagattcattgagtaattgatgtatctt 36245458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 134
Target Start/End: Original strand, 48082816 - 48082863
Alignment:
Q  87 ttataagaaaaagttgactttttaggttcatagaataattaatgtatc 134  Q
    ||||||||||||||||||||||||| ||||| |  |||||||||||||    
T  48082816 ttataagaaaaagttgactttttagattcattgtgtaattaatgtatc 48082863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 7107779 - 7107713
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatct 135  Q
    |||| |||||||||||  ||| |||| |||||||||||||||| | ||| |||||||| ||||||||    
T  7107779 tactacctccggtcctatttacaagagaaagttgactttttagatacattgaataatttatgtatct 7107713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 21857064 - 21857130
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatct 135  Q
    |||| |||||||||  ||||||||| ||||||| |||||||||   ||| |||||||||||||||||    
T  21857064 tactccctccggtcactattataagcaaaagtttactttttagacacattgaataattaatgtatct 21857130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 117
Target Start/End: Complemental strand, 28248586 - 28248536
Alignment:
Q  67 attacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||||||||||||||| |||||| |||||| | || |||||||||||||||    
T  28248586 attacttcctccggtcattattacaagaaacaattaactttttaggttcat 28248536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 41850613 - 41850659
Alignment:
Q  87 ttataagaaaaagttgactttttaggttcatagaataattaatgtat 133  Q
    ||||||||||||||| | ||||||| ||||| |||||||||||||||    
T  41850613 ttataagaaaaagttaattttttagattcattgaataattaatgtat 41850659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 28677468 - 28677399
Alignment:
Q  67 attacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatctt 136  Q
    |||||| |||||| ||||  |||||||||||| |||||||||||| || || || ||||| |||||||||    
T  28677468 attactccctccgatcctatttataagaaaaaattgactttttagatttattgagtaattgatgtatctt 28677399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 29365751 - 29365706
Alignment:
Q  88 tataagaaaaagttgactttttaggttcatagaataattaatgtat 133  Q
    ||||||||||| |||||||||||| ||||| || ||||||||||||    
T  29365751 tataagaaaaaattgactttttagattcattgagtaattaatgtat 29365706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 40142924 - 40142855
Alignment:
Q  67 attacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatctt 136  Q
    |||||| |||||||||||   ||||||||||| |||| ||||||| || || | ||||||||||||||||    
T  40142924 attactccctccggtcctatgtataagaaaaaattgattttttagatttattgtataattaatgtatctt 40142855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 26982759 - 26982823
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtat 133  Q
    |||||||| |||||  ||||||||| |||| || ||||||||| | ||| |||||||||||||||    
T  26982759 tacttccttcggtcactattataagcaaaacttcactttttagatacattgaataattaatgtat 26982823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 223
Target Start/End: Complemental strand, 33901069 - 33901033
Alignment:
Q  187 aattgtctcttataataaggaccggagggagtactat 223  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  33901069 aattgtttcttataataaggacaggagggagtactat 33901033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 34118069 - 34118021
Alignment:
Q  88 tataagaaaaagttgactttttaggttcatagaataattaatgtatctt 136  Q
    |||||||||||||||||||||||  ||||| |  |||||||||||||||    
T  34118069 tataagaaaaagttgactttttaaattcattgtgtaattaatgtatctt 34118021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 41487940 - 41487892
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||| ||||||||||||||||||||||| | |||| ||||| |||||||    
T  41487940 tactccctccggtccttattataagaaacaattgatttttttggttcat 41487892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 45025743 - 45025695
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||||||||||||| ||||||||||||| | |||| ||||||| |||||    
T  45025743 tacttcctccggtctttattataagaaacatttgattttttagattcat 45025695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 67 - 146
Target Start/End: Complemental strand, 45058161 - 45058081
Alignment:
Q  67 attacttcctccggtccttatt-ataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaata 146  Q
    ||||||||||||  |||||||| |||||||| | |||  ||||||  |  ||||||||||||||||||||| |||||||||    
T  45058161 attacttcctcctatccttatttataagaaacaattgtatttttaaatatatagaataattaatgtatcttgttgtaaata 45058081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 219
Target Start/End: Complemental strand, 48119363 - 48119331
Alignment:
Q  187 aattgtctcttataataaggaccggagggagta 219  Q
    ||||||||||||||| |||||||||||||||||    
T  48119363 aattgtctcttataaaaaggaccggagggagta 48119331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 107; Significance: 2e-53; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 69 - 216
Target Start/End: Original strand, 20502086 - 20502233
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||| |    
T  20502086 tacttcctccggtccttattataagaaaaagttgactttttagattcatagaataattaatgtatcttattgtaaatatagactagatacatcacttaca 20502185  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggaggga 216  Q
    |||||||||       |||||||| |||||||||||||||||||||||    
T  20502186 caatgaaccaaaaaaattaattgtttcttataataaggaccggaggga 20502233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 69 - 219
Target Start/End: Complemental strand, 33247440 - 33247291
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||  ||| ||||||    
T  33247440 tacttcctccggtccttgttataagaaaaagttgactttttaggttcata-aataattaatatatcttattgtaaatatagactagatatatcacttata 33247342  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
     ||||||||       |||||||||||||||||||||||||||||||||||    
T  33247341 gaatgaaccaaaaaagttaattgtctcttataataaggaccggagggagta 33247291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 67 - 221
Target Start/End: Original strand, 38978739 - 38978893
Alignment:
Q  67 attacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatccctta 166  Q
    |||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  38978739 attactccctccagtccttattataagaaaaagttgactttttagattcatagaataattaatatatcttattgtaaatatagactagatacatcactta 38978838  T
Q  167 tacaatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagtact 221  Q
     ||||||||||       |||||||| |||||||||||||| |||||||||||||    
T  38978839 cacaatgaaccaaaaaaattaattgtttcttataataaggatcggagggagtact 38978893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 69 - 219
Target Start/End: Original strand, 29451892 - 29452041
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||| |||| |    
T  29451892 tactccctccggtccttattataagaaaaagttgattttttagattcatagaataattaatgtatcttattgtaaatatatactagatacatcacttaca 29451991  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    |||||||||       | |||||| |||||||||||||| |||||||||||    
T  29451992 caatgaacc-aaaaaatcaattgtttcttataataaggatcggagggagta 29452041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 69 - 219
Target Start/End: Original strand, 7537020 - 7537170
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| |||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||| ||||||||| ||||||| |||| |||| |    
T  7537020 tactccctccggttcttattataagaaaaaattgacttcttaggttaatagaataattaatgtatcttatcgtaaatatatactagatacatcacttaca 7537119  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    |||||||||       | |||||| | ||||||||||||||||||||||||    
T  7537120 caatgaaccaaaaaaatcaattgttttttataataaggaccggagggagta 7537170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 74 - 219
Target Start/End: Complemental strand, 29874461 - 29874316
Alignment:
Q  74 cctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatg 173  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||  ||||||||||||||| |||| |||| ||||||    
T  29874461 cctccggtccttaatataagaaaaagttaactttttaggttcatagaataattaatgtattttattaaaaatatagactagatacatcacttaaacaatg 29874362  T
Q  174 aaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    ||||       | |||||| ||||||| |||| |||||||||||||    
T  29874361 aaccaaaaaagtcaattgtttcttatattaagaaccggagggagta 29874316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 69 - 176
Target Start/End: Original strand, 35204923 - 35205029
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| ||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |    
T  35204923 tactccctcctgtacttattataagaaaaagttga-tttttaggttcatagaataattaatgtatcttattgtaaatatagtctagatacatcccttaca 35205021  T
Q  169 caatgaac 176  Q
    ||||||||    
T  35205022 caatgaac 35205029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 69 - 176
Target Start/End: Complemental strand, 35212236 - 35212130
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| ||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |    
T  35212236 tactccctcctgtacttattataagaaaaagttga-tttttaggttcatagaataattaatgtatcttattgtaaatatagtctagatacatcccttaca 35212138  T
Q  169 caatgaac 176  Q
    ||||||||    
T  35212137 caatgaac 35212130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 79 - 219
Target Start/End: Complemental strand, 24173559 - 24173419
Alignment:
Q  79 ggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaaccn 178  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||| ||||| |||| |||| |||||||||      
T  24173559 ggtccttattataagaaaaagttgactttttaagtttatagaataattaatgtatcttattgaaaatatagattagatacatcacttacacaatgaacta 24173460  T
Q  179 nnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
          | |||| | ||||||||||||||| ||||||||||    
T  24173459 aaaaaatcaattatttcttataataaggactggagggagta 24173419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 80 - 236
Target Start/End: Complemental strand, 29002880 - 29002724
Alignment:
Q  80 gtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaaccnn 179  Q
    |||||||||||||||||||||||| |||||||||| || ||||||||||| |||||||| | ||||||||||||||| |||| |||| ||||||||||      
T  29002880 gtccttattataagaaaaagttgattttttaggtttatggaataattaatatatcttatcgaaaatatagactagatacatcacttacacaatgaaccaa 29002781  T
Q  180 nnnnnttaattgtctcttataataaggaccggagggagtactatatttgttcttaaa 236  Q
         | |||||| |||||||| ||||| |||||||||||||   ||||||||||||    
T  29002780 aaaagtcaattgtttcttataacaaggatcggagggagtactgcctttgttcttaaa 29002724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 69 - 175
Target Start/End: Complemental strand, 32455288 - 32455182
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| ||||| |||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||  |    
T  32455288 tactccctccagtccttattataagaaaaagttaacattttaagttcatagaataattaatgtatcttattgtaaatatagactagatacatcacttcca 32455189  T
Q  169 caatgaa 175  Q
    |||||||    
T  32455188 caatgaa 32455182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 69 - 219
Target Start/End: Original strand, 5355550 - 5355700
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| |||||| || ||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||| || |||| |||| |    
T  5355550 tactccctccgatctttattctaagaaaaagttaacattttaggttcatagaataattaatgtatcttattgtaaatataaactaaatacatcacttaca 5355649  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    ||||||||        | || ||| ||||||||||||||||||||||||||    
T  5355650 caatgaactaaaaaagtcaactgtttcttataataaggaccggagggagta 5355700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 69 - 175
Target Start/End: Original strand, 27600758 - 27600863
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| ||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||  ||| |||| |    
T  27600758 tactccctccggtctttattataagaaaaa-ttgactttttaagttcatagaataattaatgtatcttattgtaaatatagattagataaatcacttaca 27600856  T
Q  169 caatgaa 175  Q
    |||||||    
T  27600857 caatgaa 27600863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 74 - 208
Target Start/End: Complemental strand, 9630379 - 9630245
Alignment:
Q  74 cctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatg 173  Q
    ||||||||| ||||||||| ||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||  ||| ||  ||| |||| ||||||    
T  9630379 cctccggtctttattataacaaaaaattgattttttagattcatagaataattaatgtatcttattgtaaatataatctaaatatatcacttacacaatg 9630280  T
Q  174 aaccnnnnnnnttaattgtctcttataataaggac 208  Q
    ||||       |||||||| |||||||||||||||    
T  9630279 aaccaaaaaaattaattgtttcttataataaggac 9630245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 74 - 172
Target Start/End: Complemental strand, 33970801 - 33970703
Alignment:
Q  74 cctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaat 172  Q
    |||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||| |||||  ||||||| |||| || ||||  |||||||||    
T  33970801 cctccggtccttattataagaaaaagttgattgtttagtttcatagaataattaatgtattttattaaaaatatatactaaatacatcatttatacaat 33970703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 69 - 219
Target Start/End: Original strand, 13932460 - 13932610
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| |||||||||||| |||||||||| | ||||||||||| |||||| | |||||||||||||||  || |||||| ||||||||| |||| |||| |    
T  13932460 tactccctccggtccttgttataagaaacaattgactttttatgttcattggataattaatgtatctcgttataaatagagactagatacatcacttaca 13932559  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    || ||||||       | |||| | |||||||||||||||| |||||||||    
T  13932560 cagtgaacctaaaaagtcaattatttcttataataaggaccagagggagta 13932610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 19211279 - 19211376
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatccctta 166  Q
    |||| |||||||||||||||||||||||   |||||||||||  ||||| || ||||||||||||||| ||||||||||||||||||| |||| ||||    
T  19211279 tactccctccggtccttattataagaaacttttgactttttatattcattgagtaattaatgtatcttgttgtaaatatagactagatacatcactta 19211376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 69 - 219
Target Start/End: Complemental strand, 73933 - 73783
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| ||||||||| ||||||||||||| | ||||||||| |||||||| ||||||||||| |||||  || |||| | ||| ||||| ||||  ||| |    
T  73933 tactccctccggtctttattataagaaacaattgacttttcaggttcattgaataattaatatatctcgttataaacaaagagtagatacatcatttaca 73834  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    ||||||| |       | |||||| | ||||||||||||||||||||||||    
T  73833 caatgaatctaaaaagtcaattgttttttataataaggaccggagggagta 73783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 13932617 - 13932563
Alignment:
Q  62 taaatattacttcctccggtccttattataagaaaaagttgactttttaggttca 116  Q
    ||||||||||| |||| |||||||||||||||||| | |||||||||||||||||    
T  13932617 taaatattactccctctggtccttattataagaaataattgactttttaggttca 13932563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 8680690 - 8680642
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||| ||||||||||||||||||||||| | ||||||||||||||||||    
T  8680690 tactccctccggtccttattataagaaacatttgactttttaggttcat 8680642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 171
Target Start/End: Original strand, 13128211 - 13128294
Alignment:
Q  88 tataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaa 171  Q
    ||||||||| | || |||||||| ||| || ||||||||||| |||||  || ||||||||||||||||||||| |||| ||||    
T  13128211 tataagaaataattaactttttatgtttattgaataattaatatatctcgttataaatatagactagatgcatcacttacacaa 13128294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 13789881 - 13789818
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgta 132  Q
    |||| |||||||| ||  |||||||||||||||||||||| || ||||| ||||||||||||||    
T  13789881 tactccctccggttctatttataagaaaaagttgacttttcagattcattgaataattaatgta 13789818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 74 - 117
Target Start/End: Original strand, 17225162 - 17225205
Alignment:
Q  74 cctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    ||||||||| |||||||||| |||||||||||||||||||||||    
T  17225162 cctccggtcgttattataagcaaaagttgactttttaggttcat 17225205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 35318663 - 35318576
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagat 156  Q
    |||||| | |||||||||||| |||||| | |||| |||||| ||| || |||||||||||||||||  || ||||||| ||||||||    
T  35318663 tacttctttcggtccttattacaagaaacaattgattttttaagtttattgaataattaatgtatctcgttataaatatggactagat 35318576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 38394427 - 38394490
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgta 132  Q
    |||| |||||| ||||  |||||||||||| |||||||||||| ||||| ||||||||||||||    
T  38394427 tactccctccgatcctatttataagaaaaaattgactttttagattcattgaataattaatgta 38394490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 111
Target Start/End: Complemental strand, 13279031 - 13278993
Alignment:
Q  73 tcctccggtccttattataagaaaaagttgactttttag 111  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  13279031 tcctccggtccttattataagaaacagttgactttttag 13278993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 15968310 - 15968376
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatct 135  Q
    |||| |||||||||||  ||||||||||||||| | ||||||| |||||  ||||||||||||||||    
T  15968310 tactacctccggtcctatttataagaaaaagttaattttttagattcattcaataattaatgtatct 15968376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 5355700 - 5355660
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgacttttt 109  Q
    |||| ||||||||||||||||||||||| ||||||||||||    
T  5355700 tactccctccggtccttattataagaaacagttgacttttt 5355660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 3814120 - 3814057
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgta 132  Q
    |||| ||||||||| |  |||||||||||| |||||||||||| ||| | ||||||||||||||    
T  3814120 tactccctccggtcttgtttataagaaaaaattgactttttagattcgttgaataattaatgta 3814057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 116
Target Start/End: Complemental strand, 7313975 - 7313928
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttca 116  Q
    |||| |||||||||  ||||||||| ||||||||||||||||||||||    
T  7313975 tactccctccggtcactattataagcaaaagttgactttttaggttca 7313928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 22731407 - 22731344
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgta 132  Q
    |||| |||||||||||  ||||||||||||||| | ||||||| |||||  |||||||||||||    
T  22731407 tactacctccggtcctatttataagaaaaagttaattttttagattcattaaataattaatgta 22731344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 5240221 - 5240287
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatct 135  Q
    |||| |||||||||  ||||||||| |||| |||| ||||||| | ||| |||||||||||||||||    
T  5240221 tactccctccggtcactattataagcaaaatttgattttttagatacattgaataattaatgtatct 5240287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 117
Target Start/End: Complemental strand, 29031187 - 29031137
Alignment:
Q  67 attacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||||| |||||||||||  ||||||||||||||| ||||||||| |||||    
T  29031187 attactccctccggtcctatttataagaaaaagttaactttttagattcat 29031137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 111
Target Start/End: Original strand, 30132841 - 30132883
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttag 111  Q
    |||| ||||||||||||||||||||||||| || |||||||||    
T  30132841 tactccctccggtccttattataagaaaaaattaactttttag 30132883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 30132903 - 30132937
Alignment:
Q  185 ttaattgtctcttataataaggaccggagggagta 219  Q
    |||||||| ||||||||||||||||||||||||||    
T  30132903 ttaattgtttcttataataaggaccggagggagta 30132937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 11931967 - 11932036
Alignment:
Q  68 ttacttcctccggtccttattataagaaaaag-ttgactttttaggttcatagaataattaatgtatctt 136  Q
    ||||| |||||||||||  ||||||||||||  |||||||||||| ||||| |  |||||||||||||||    
T  11931967 ttactccctccggtcctatttataagaaaaaaattgactttttagattcattgtgtaattaatgtatctt 11932036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 117
Target Start/End: Complemental strand, 40515327 - 40515278
Alignment:
Q  68 ttacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||||||||||||||  ||||||||| ||||||| ||||||||| |||||    
T  40515327 ttacttcctccggtcactattataagcaaaagttcactttttagattcat 40515278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 73783 - 73831
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||| ||||||||||||||||||| ||| | |||||||||||| |||||    
T  73783 tactccctccggtccttattataaaaaacaattgactttttagattcat 73831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 892562 - 892610
Alignment:
Q  85 tattataagaaaaagttgactttttaggttcatagaataattaatgtat 133  Q
    ||||||||| |||| || ||||||||| ||||| |||||||||||||||    
T  892562 tattataagcaaaaattcactttttagattcattgaataattaatgtat 892610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 4e-48; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 69 - 219
Target Start/End: Complemental strand, 27302228 - 27302078
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||    
T  27302228 tacttcctccggtctttattataagaaaaagttgactttttaggttcatagaataattaatgtatctaattgtaaatatagactagatacatcacttata 27302129  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    |||||||||       |||||| | ||||||||||| |||||||| |||||    
T  27302128 caatgaaccaaaaaagttaattctttcttataataaagaccggagagagta 27302078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 69 - 219
Target Start/End: Complemental strand, 45113883 - 45113733
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |    
T  45113883 tactccctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatacatcacttaca 45113784  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    |||||||||       | |||||| |||||||||||||| | |||||||||    
T  45113783 caatgaaccaaaaaaatcaattgtttcttataataaggatcagagggagta 45113733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 81 - 220
Target Start/End: Original strand, 43901592 - 43901731
Alignment:
Q  81 tccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaaccnnn 180  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||  ||| ||||||||||       
T  43901592 tccttattatatgaaaaagttgactttttaggttcatagaataattaatgtatcttattgaaaatatagactaggtacatcatttacacaatgaaccaaa 43901691  T
Q  181 nnnnttaattgtctcttataataaggaccggagggagtac 220  Q
        |||||||| ||||||||||||||||||||| |||||    
T  43901692 aaagttaattgtttcttataataaggaccggaggtagtac 43901731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 79 - 219
Target Start/End: Original strand, 53284325 - 53284465
Alignment:
Q  79 ggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaaccn 178  Q
    ||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||| |||||||||| |||| |||||||||| ||||     
T  53284325 ggtccttattataagaaaaagttgattttttagtttcataaaataattaatgtatcttattgtaaatgtagactagatacatcacttatacaataaacca 53284424  T
Q  179 nnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
          | |||||| ||||||||||||||||||||| ||||    
T  53284425 aaaaaatcaattgtttcttataataaggaccggaggaagta 53284465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 69 - 219
Target Start/End: Original strand, 16123756 - 16123905
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||| ||| |||||||||| |||||||||||||||||||||||||| |||  ||||||    
T  16123756 tacttcctccggtccttattataagaaaaaattgactttt-aggtttataaaataattaatatatcttattgtaaatatagactagatacattacttata 16123854  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    |||||||||       |||||||| | ||||||||||||||| | ||||||    
T  16123855 caatgaaccaaaaaagttaattgttttttataataaggaccgaacggagta 16123905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 69 - 219
Target Start/End: Original strand, 53703729 - 53703880
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| ||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||| || |||||||||||||||| |||| |||| |    
T  53703729 tactccctccggtccttattataagaaacaattgacttttttggttcatagaataattaatgtatcttgttataaatatagactagatacatcacttaca 53703828  T
Q  169 caatgaaccnnnnnnnttaa-ttgtctcttataataaggaccggagggagta 219  Q
    |||||||||       | || || | ||||||||||||||||||||||||||    
T  53703829 caatgaacctaaaaggtcaacttttttcttataataaggaccggagggagta 53703880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 69 - 219
Target Start/End: Complemental strand, 31376324 - 31376174
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| |||||||||||||||| |||||| | |||||||||| |||||||||||||||||||||||||| || |||||||||||||||| |||| |||| |    
T  31376324 tactccctccggtccttattacaagaaacaattgacttttttggttcatagaataattaatgtatcttcttataaatatagactagatacatcacttaca 31376225  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
     ||||||||       | || ||| ||||||||||||||||||||||||||    
T  31376224 taatgaacctaaaaagtcaaatgtttcttataataaggaccggagggagta 31376174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 69 - 219
Target Start/End: Complemental strand, 39617060 - 39616910
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| |||||||||||||||| |||||| | |||||||||| |||||||||||||||||||||||||| || |||||||||||||||| |||| |||| |    
T  39617060 tactccctccggtccttattacaagaaacaattgacttttttggttcatagaataattaatgtatcttgttataaatatagactagatacatcacttaca 39616961  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
     ||||||||       | || ||| ||||||||||||||||||||||||||    
T  39616960 taatgaaccttaaaagtcaaatgtttcttataataaggaccggagggagta 39616910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 76 - 177
Target Start/End: Original strand, 21944295 - 21944396
Alignment:
Q  76 tccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaa 175  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || | |||| |||| |||    
T  21944295 tccggtccttattataagaaaaaattgactttttaggttcatagaataattaatgtatcttagtgtagatatagactagatacaccacttacacaaggaa 21944394  T
Q  176 cc 177  Q
    ||    
T  21944395 cc 21944396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 76 - 156
Target Start/End: Original strand, 46220372 - 46220452
Alignment:
Q  76 tccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagat 156  Q
    ||||||||||||||||||||||| |||| ||||||  |||||||||||||||||||||||||||||||||||| |||||||    
T  46220372 tccggtccttattataagaaaaaattgattttttatattcatagaataattaatgtatcttattgtaaatatatactagat 46220452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 75 - 142
Target Start/End: Complemental strand, 50660081 - 50660014
Alignment:
Q  75 ctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgta 142  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  50660081 ctccggtccttattataagaaaaagttgactttttagatttatagaataattaatgtatcttattgta 50660014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 69 - 161
Target Start/End: Complemental strand, 19227457 - 19227365
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatc 161  Q
    |||| ||||||||||||||||||||||| | |||| ||||| ||||||||||||||||||| |||||| || |||||||||||||||| ||||    
T  19227457 tactccctccggtccttattataagaaacaattgatttttttggttcatagaataattaatttatcttgttataaatatagactagatacatc 19227365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 69 - 161
Target Start/End: Complemental strand, 24489461 - 24489370
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatc 161  Q
    |||| |||||| |||||||||||||| |||||||| ||||||  |||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  24489461 tactccctccgatccttattataagacaaagttga-tttttaaattcatagaataattaatgtatcttatagtaaatataaactagatacatc 24489370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 69 - 176
Target Start/End: Complemental strand, 50100344 - 50100236
Alignment:
Q  69 tacttcctccggtccttattataagaaaa-agttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttat 167  Q
    |||| ||||||||||||||||||| |||| | || |||| || | ||||||||| |||||| |||||||||| |||||||||||||||| |||| |||||    
T  50100344 tactccctccggtccttattataaaaaaataattaacttgtttgattcatagaaaaattaacgtatcttattataaatatagactagatacatcacttat 50100245  T
Q  168 acaatgaac 176  Q
    |||||||||    
T  50100244 acaatgaac 50100236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 69 - 175
Target Start/End: Complemental strand, 44118332 - 44118226
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    ||||||||| |||||||||||||||||| | |||||||||||| |||||   ||||||||||||| || || |||||||||||||||| ||||  ||| |    
T  44118332 tacttcctctggtccttattataagaaacaattgactttttagattcattatataattaatgtatattgttataaatatagactagatacatcatttaca 44118233  T
Q  169 caatgaa 175  Q
    |||||||    
T  44118232 caatgaa 44118226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 69 - 213
Target Start/End: Complemental strand, 48643753 - 48643609
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| ||||| |||||||||| |||||| | |||||||||||| ||||| ||||||||||||||| |  || |||||||||||||||| |||  |||| |    
T  48643753 tactccctccagtccttattacaagaaacaattgactttttagattcattgaataattaatgtatttcgttataaatatagactagatacattacttaca 48643654  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggag 213  Q
    | || ||||       | |||||| ||||||||||||||||||||    
T  48643653 cgattaacctaaaaagtcaattgtttcttataataaggaccggag 48643609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 81 - 177
Target Start/End: Original strand, 36191485 - 36191584
Alignment:
Q  81 tccttattataagaaaaagttgactttttaggttcatagaata---attaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaacc 177  Q
    |||||||||||||||| | |||||||||| |||||||||||||   ||||||||||||| || || ||||||||||||| |||| |||| | ||||||||    
T  36191485 tccttattataagaaacaattgacttttttggttcatagaataatgattaatgtatcttgttatatatatagactagatacatcacttacataatgaacc 36191584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 48346599 - 48346502
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatccctta 166  Q
    |||| |||||| ||||||||||||||||   || ||||||||| |||||  | ||||||||||||||| || |||||||||||||||| |||| ||||    
T  48346599 tactccctccgatccttattataagaaactttttactttttagattcattaagtaattaatgtatcttgttataaatatagactagatacatcactta 48346502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 124
Target Start/End: Original strand, 2544436 - 2544491
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataa 124  Q
    |||| ||||||||||||||||||||||| | |||||||||||||||||| ||||||    
T  2544436 tactccctccggtccttattataagaaacaattgactttttaggttcattgaataa 2544491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 219
Target Start/End: Original strand, 8769175 - 8769282
Alignment:
Q  111 ggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaaccnnnnnnnttaattgtctcttataataaggaccg 210  Q
    |||||||||||| ||||||||||||| || |||||||||| ||||| |||| |||| |||||||||        |||| | | |||||||||||||||||    
T  8769175 ggttcatagaatgattaatgtatcttgttataaatatagattagatacatcacttacacaatgaacttaaaaagttaact-tttcttataataaggaccg 8769273  T
Q  211 gagggagta 219  Q
    |||||||||    
T  8769274 gagggagta 8769282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 21662885 - 21662948
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgta 132  Q
    |||| |||||||||||  ||||||||||||||||||||||||| ||||| || |||||||||||    
T  21662885 tactccctccggtcctatttataagaaaaagttgactttttagattcattgagtaattaatgta 21662948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 53442056 - 53441993
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgta 132  Q
    |||| |||||||||||  ||||||||||||||||||||||||  ||||| ||||||||||||||    
T  53442056 tactccctccggtcctatttataagaaaaagttgactttttaaattcattgaataattaatgta 53441993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 103 - 217
Target Start/End: Original strand, 2544491 - 2544606
Alignment:
Q  103 actttttaggttcatagaataattaatgtatcttattgtaaa-tatagactagatgcatcccttatacaatgaaccnnnnnnnttaattgtctcttataa 201  Q
    ||||||||||||||| |||||||| ||||||||| || |||| ||||||| | || |||| ||||||||||||| |       | |||||| |||| |||    
T  2544491 actttttaggttcattgaataattgatgtatcttgttataaattatagaccaaatacatcacttatacaatgaatctaaaaagtcaattgtttcttgtaa 2544590  T
Q  202 taaggaccggagggag 217  Q
    ||||||||||||||||    
T  2544591 taaggaccggagggag 2544606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 44664212 - 44664262
Alignment:
Q  100 ttgactttttaggttcatagaataattaatgtatcttattgtaaatataga 150  Q
    |||| ||||||||||||| ||||||||||||||||||||| ||||||||||    
T  44664212 ttgattttttaggttcattgaataattaatgtatcttattataaatataga 44664262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 8764273 - 8764334
Alignment:
Q  111 ggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaat 172  Q
    |||||||||||||||||||||||||| || |||||||||| ||||| |||| |||| |||||    
T  8764273 ggttcatagaataattaatgtatcttgttataaatatagattagatacatcacttacacaat 8764334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 31376174 - 31376222
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||| ||||||||||||||||||||||| | ||||||||||||||||||    
T  31376174 tactccctccggtccttattataagaaacatttgactttttaggttcat 31376222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 135
Target Start/End: Complemental strand, 22003949 - 22003879
Alignment:
Q  65 atattacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatct 135  Q
    ||||||||||||||||||||  |||||| | ||| |||||||||||| | ||| |||||||| ||||||||    
T  22003949 atattacttcctccggtcctatttataacagaaaattgactttttagatacattgaataatttatgtatct 22003879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 135
Target Start/End: Complemental strand, 22011466 - 22011396
Alignment:
Q  65 atattacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatct 135  Q
    ||||||||||||||||||||  |||||| | ||| |||||||||||| | ||| |||||||| ||||||||    
T  22011466 atattacttcctccggtcctatttataacagaaaattgactttttagatacattgaataatttatgtatct 22011396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 175
Target Start/End: Original strand, 45746482 - 45746576
Alignment:
Q  81 tccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaa 175  Q
    |||||| ||||||||| | |||| ||||||| || || ||||||||||| |||||  || |||||||||||||||| |||| |||| ||| ||||    
T  45746482 tccttagtataagaaacaattgattttttagatttattgaataattaatatatctcgttataaatatagactagatccatcacttacacattgaa 45746576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 53703880 - 53703831
Alignment:
Q  69 tacttcctccggtccttattataaga-aaaagttgactttttaggttcat 117  Q
    |||| ||||||||||||||||||||| |||||||||| ||||||||||||    
T  53703880 tactccctccggtccttattataagaaaaaagttgaccttttaggttcat 53703831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 25113348 - 25113404
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataat 125  Q
    ||||||||||||||||  |||||||| |||||||||||||||| | ||| |||||||    
T  25113348 tacttcctccggtcctatttataagagaaagttgactttttagatacattgaataat 25113404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 39616910 - 39616958
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||| ||||||||||||||||||||||| | ||||||||| ||||||||    
T  39616910 tactccctccggtccttattataagaaacatttgacttttaaggttcat 39616958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 135
Target Start/End: Original strand, 48643609 - 48643669
Alignment:
Q  75 ctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatct 135  Q
    |||||||||||||||||||||| | ||||||||||||||| || |  ||| ||||||||||    
T  48643609 ctccggtccttattataagaaacaattgactttttaggttaatcgtgtaagtaatgtatct 48643669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 379215 - 379156
Alignment:
Q  76 tccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatct 135  Q
    |||||||||  |||||||| |||||||||||||||| | ||| |||||||| ||||||||    
T  379215 tccggtcctatttataagagaaagttgactttttagatacattgaataatttatgtatct 379156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 213
Target Start/End: Original strand, 19899626 - 19899756
Alignment:
Q  84 ttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttat--tgtaaatatagactagatgcatcccttatacaatgaaccnnnn 181  Q
    ||||||||||||| | |||| ||||||||||||| |||||||||| | ||||| |  | || ||||||||||||| ||||  ||| ||||||||||        
T  19899626 ttattataagaaacaattga-tttttaggttcattgaataattaacgcatcttgttatatatatatagactagatacatcatttacacaatgaacctata 19899724  T
Q  182 nnnttaattgtctcttataataaggaccggag 213  Q
       | |||||| | ||||||||||||||||||    
T  19899725 gagtcaattgttttttataataaggaccggag 19899756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 28406616 - 28406553
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgta 132  Q
    |||| |||||||||||  ||| |||||| | |||||||||||||||||| |||||||| |||||    
T  28406616 tactccctccggtcctatttacaagaaacaattgactttttaggttcattgaataatttatgta 28406553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 51516957 - 51517019
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgta 132  Q
    |||| |||||||||||  ||||||||||||||||||||||||| || || || |||||||||||    
T  51516957 tactccctccggtcctatttataagaaaaagttgactttttagatt-atggagtaattaatgta 51517019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 117
Target Start/End: Complemental strand, 105518 - 105468
Alignment:
Q  67 attacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||| |||||||||||  | ||||||| |||||||||||||||||||||||    
T  105518 attatttcctccggtcacttttataagcaaaagttgactttttaggttcat 105468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 42896141 - 42896207
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatct 135  Q
    |||| ||||||||| ||||||||||||  | || ||||||||||||||| |||||| | ||||||||    
T  42896141 tactccctccggtctttattataagaagcaattcactttttaggttcattgaataactgatgtatct 42896207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 51723395 - 51723441
Alignment:
Q  87 ttataagaaaaagttgactttttaggttcatagaataattaatgtat 133  Q
    ||||||||||||||||| ||||||| ||||| || ||||||||||||    
T  51723395 ttataagaaaaagttgattttttagattcattgagtaattaatgtat 51723441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 53284465 - 53284399
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatct 135  Q
    |||||||||||||||||||||||||||| | |||| ||||| |||| || | |||| | ||||||||    
T  53284465 tacttcctccggtccttattataagaaacaattgatttttttggtttattgtataagtgatgtatct 53284399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 172
Target Start/End: Original strand, 6061115 - 6061184
Alignment:
Q  103 actttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaat 172  Q
    ||||||||| |||||||||||||||||| || |  || |||||||| ||||||| |||| |||| |||||    
T  6061115 actttttagattcatagaataattaatgcatttcgttataaatatatactagatacatcacttacacaat 6061184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 25313691 - 25313626
Alignment:
Q  68 ttacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtat 133  Q
    |||||| ||||| || ||||||||||||| | ||||||||||| ||||||  || |||||||||||    
T  25313691 ttactttctccgatctttattataagaaacaattgactttttaagttcattaaacaattaatgtat 25313626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 129
Target Start/End: Complemental strand, 34269376 - 34269327
Alignment:
Q  80 gtccttattataagaaaaagttgactttttaggttcatagaataattaat 129  Q
    ||||||||||||| ||| | |||||||||||| ||||| |||||||||||    
T  34269376 gtccttattataaaaaacatttgactttttagattcattgaataattaat 34269327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 136
Target Start/End: Original strand, 44518053 - 44518102
Alignment:
Q  87 ttataagaaaaagttgactttttaggttcatagaataattaatgtatctt 136  Q
    |||||||||||  |||||||||||| ||||| || |||||||||||||||    
T  44518053 ttataagaaaactttgactttttagattcattgagtaattaatgtatctt 44518102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 219
Target Start/End: Complemental strand, 2544468 - 2544436
Alignment:
Q  187 aattgtctcttataataaggaccggagggagta 219  Q
    |||||| ||||||||||||||||||||||||||    
T  2544468 aattgtttcttataataaggaccggagggagta 2544436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 117
Target Start/End: Complemental strand, 4190757 - 4190725
Alignment:
Q  85 tattataagaaaaagttgactttttaggttcat 117  Q
    ||||||||| |||||||||||||||||||||||    
T  4190757 tattataagcaaaagttgactttttaggttcat 4190725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 8769282 - 8769235
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||| |||||||||||||||||||| ||||||| |||||||| ||||||    
T  8769282 tactccctccggtccttattataag-aaaagttaactttttaagttcat 8769235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 161
Target Start/End: Complemental strand, 13356887 - 13356791
Alignment:
Q  65 atattacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatc 161  Q
    |||||||| ||||  || ||||||||||||||   |||||||||||  |||||  ||||| ||||||||||   | |||||||||||||||| ||||    
T  13356887 atattactccctctagttcttattataagaaactattgactttttaaattcattaaataagtaatgtatctcggtataaatatagactagatacatc 13356791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 219
Target Start/End: Original strand, 19227425 - 19227457
Alignment:
Q  187 aattgtctcttataataaggaccggagggagta 219  Q
    |||||| ||||||||||||||||||||||||||    
T  19227425 aattgtttcttataataaggaccggagggagta 19227457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 27161440 - 27161504
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtat 133  Q
    |||||||||||||| |||||||||  ||||  | | |||||||||||||||||||| | ||||||    
T  27161440 tacttcctccggtcattattataaacaaaaaattattttttaggttcatagaataaatgatgtat 27161504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 28406466 - 28406530
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtat 133  Q
    |||| |||||||||||  ||| |||||| | |||||||||||| ||| | |||||||||||||||    
T  28406466 tactccctccggtcctatttacaagaaacaattgactttttagattcgttgaataattaatgtat 28406530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 36571519 - 36571471
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    ||||| ||||||||  ||||||||| |||||||||||||||| ||||||    
T  36571519 tactttctccggtcactattataagtaaaagttgactttttaagttcat 36571471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 98
Target Start/End: Original strand, 40344852 - 40344884
Alignment:
Q  66 tattacttcctccggtccttattataagaaaaa 98  Q
    ||||||| |||||||||||||||||||||||||    
T  40344852 tattactccctccggtccttattataagaaaaa 40344884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 43901730 - 43901682
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||| ||||||||||||||||||||||| | || ||||||| |||||||    
T  43901730 tactacctccggtccttattataagaaacaattaacttttttggttcat 43901682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 219
Target Start/End: Complemental strand, 53703761 - 53703729
Alignment:
Q  187 aattgtctcttataataaggaccggagggagta 219  Q
    |||||| ||||||||||||||||||||||||||    
T  53703761 aattgtttcttataataaggaccggagggagta 53703729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 2e-47; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 69 - 222
Target Start/End: Complemental strand, 36103542 - 36103389
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||| |    
T  36103542 tactccctccggtccttattataagaaaaagttgattttttaggttcatagaataattaatgtatcttattgtaaatatagtctagatacatcacttaca 36103443  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagtacta 222  Q
    ||||||||        |||||||| | |||||||||||||||||||||||||||    
T  36103442 caatgaactaaaaatgttaattgtttattataataaggaccggagggagtacta 36103389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 64 - 207
Target Start/End: Complemental strand, 15239846 - 15239703
Alignment:
Q  64 aatattacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatccc 163  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |    
T  15239846 aataatactccctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatatatcttattgtaaatatagactagatacatcac 15239747  T
Q  164 ttatacaatgaaccnnnnnnnttaattgtctcttataataagga 207  Q
    ||| ||||||||||       | |||||| ||||||||||||||    
T  15239746 ttacacaatgaaccaacaaaatcaattgtttcttataataagga 15239703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 69 - 177
Target Start/End: Complemental strand, 28143894 - 28143786
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |||| |    
T  28143894 tactccctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattataaatatagactagatacatcacttaca 28143795  T
Q  169 caatgaacc 177  Q
    |||||||||    
T  28143794 caatgaacc 28143786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 69 - 214
Target Start/End: Complemental strand, 40534662 - 40534517
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||  |||||    
T  40534662 tactccctccggtccttattataagataaagttgactttttaggttcatagaataaataatgtatcttattgtaaatatagactagatacatcatttata 40534563  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagg 214  Q
    ||||||||        | |||||| |||||||||||||||||||||    
T  40534562 caatgaactaaaaaaatcaattgtttcttataataaggaccggagg 40534517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 63 - 177
Target Start/End: Complemental strand, 23464652 - 23464537
Alignment:
Q  63 aaatattacttcctccggtccttattataagaaaaagttgact-ttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatc 161  Q
    ||||| ||||||  ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23464652 aaataatacttcacccggtccttattataagaaaaagttgattattttaggttcatagaataattaatgtatcttattgtaaatatagactagatacatc 23464553  T
Q  162 ccttatacaatgaacc 177  Q
     |||||||||||||||    
T  23464552 tcttatacaatgaacc 23464537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 69 - 213
Target Start/End: Original strand, 45076341 - 45076485
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||| |||| |    
T  45076341 tactccctccggtccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactagatacatcacttaca 45076440  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggag 213  Q
    |||||||||       | |||||| | ||||||||||||||||||    
T  45076441 caatgaaccaaaaaagtcaattgttttttataataaggaccggag 45076485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 84 - 156
Target Start/End: Original strand, 27306725 - 27306797
Alignment:
Q  84 ttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagat 156  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  27306725 ttattataagaaaaagttgactttttaggttcattgaataattaatgtatcttattgtaaatatagactagat 27306797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 69 - 219
Target Start/End: Complemental strand, 25795387 - 25795237
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| |||||||||||||||| |||||| | |||||||||||| ||||| ||||||||||||||| |  || |||||||||||||||| |||  |||| |    
T  25795387 tactccctccggtccttattacaagaaacaattgactttttagattcattgaataattaatgtatttcgttataaatatagactagatacattacttaca 25795288  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    | || ||||       | |||||| ||||||||||||||||||||| ||||    
T  25795287 cgattaacctaaaaagtcaattgtttcttataataaggaccggaggtagta 25795237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 69 - 177
Target Start/End: Original strand, 41464713 - 41464821
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||||| ||||||| ||||||||| ||| | |||| |||||| |||||| |||||||||||||||||  || |||||||||||||||| |||| |||| |    
T  41464713 tacttcatccggtctttattataaaaaacaattgattttttaagttcattgaataattaatgtatctcgttataaatatagactagatacatcacttaca 41464812  T
Q  169 caatgaacc 177  Q
    |||||||||    
T  41464813 caatgaacc 41464821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 81 - 177
Target Start/End: Complemental strand, 3365412 - 3365316
Alignment:
Q  81 tccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaacc 177  Q
    |||||||||||||||| | |||| ||||| | ||||| ||||||||||| |||||| || |||||||||| ||||| |||| |||||||||||||||    
T  3365412 tccttattataagaaataattgatttttttgattcattgaataattaatatatcttgttataaatatagattagatacatcacttatacaatgaacc 3365316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 84 - 166
Target Start/End: Complemental strand, 9373528 - 9373446
Alignment:
Q  84 ttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatccctta 166  Q
    ||||||||||||| | |||||||||||  ||||| |||||||||| ||||||| |||||||||||||||| || |||| ||||    
T  9373528 ttattataagaaacaattgactttttaaattcattgaataattaacgtatcttgttgtaaatatagactacatacatcactta 9373446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 219
Target Start/End: Complemental strand, 27311726 - 27311576
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| |||||||||||||| | |||||| | |||| ||||||| || || |||||||||| ||||||| || ||||||||||||||||  |||  || ||    
T  27311726 tactccctccggtccttatcacaagaaacaattgattttttagatttattgaataattaacgtatcttgttataaatatagactagatatatcatttgta 27311627  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    |||||||||       | |||||| |||||||||||| | | |||||||||    
T  27311626 caatgaacctaaaaagtcaattgtttcttataataagaatccgagggagta 27311576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 219
Target Start/End: Original strand, 6971579 - 6971719
Alignment:
Q  79 ggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaaccn 178  Q
    |||||||||||||||||| | |||||||||||  || || | ||||||||||||| || || |||||||||| ||||| ||||  ||| ||||||||||     
T  6971579 ggtccttattataagaaacaattgactttttaaatttattgtataattaatgtatattgttataaatatagattagatacatcatttacacaatgaacct 6971678  T
Q  179 nnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
          | || ||| ||||||||||||||| ||||| ||||    
T  6971679 aaaaagtcaaatgtttcttataataaggacaggaggaagta 6971719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 176
Target Start/End: Complemental strand, 38449087 - 38448980
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    ||||||| ||||| |||||| ||||||| | ||||||||||||||||||  ||||||| ||| ||||| |  ||||||||||  |||| |||| |||| |    
T  38449087 tacttccaccggttcttattttaagaaacaattgactttttaggttcattaaataattgatgcatcttgtgataaatatagatcagatacatcacttaca 38448988  T
Q  169 caatgaac 176  Q
    ||||||||    
T  38448987 caatgaac 38448980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 6971719 - 6971671
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||||||||| ||||||||||||||||| | ||||||||||||||||||    
T  6971719 tacttcctcctgtccttattataagaaacatttgactttttaggttcat 6971671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 172
Target Start/End: Complemental strand, 11687609 - 11687521
Alignment:
Q  84 ttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaat 172  Q
    ||||||||||||| | |||||||||||| || || ||||||||||| || ||  || |||||||||||||||| |||| |||| |||||    
T  11687609 ttattataagaaacaattgactttttagatttattgaataattaatataactcgttataaatatagactagatacatcacttacacaat 11687521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 12873722 - 12873786
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtat 133  Q
    |||| |||||| ||||| ||||||||||||||||||||||||| |||||  | ||||||||||||    
T  12873722 tactccctccgatcctttttataagaaaaagttgactttttagattcattaagtaattaatgtat 12873786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 5109368 - 5109426
Alignment:
Q  75 ctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtat 133  Q
    ||||||||||  ||||||||||||||| ||||||||| ||||| || ||||||||||||    
T  5109368 ctccggtcctatttataagaaaaagttaactttttagattcattgagtaattaatgtat 5109426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 25795237 - 25795303
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatct 135  Q
    |||| ||||||||||||||||||||||| | ||||||||||||||| || |  ||| ||||||||||    
T  25795237 tactacctccggtccttattataagaaacaattgactttttaggttaatcgtgtaagtaatgtatct 25795303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 133
Target Start/End: Complemental strand, 28249064 - 28249018
Alignment:
Q  87 ttataagaaaaagttgactttttaggttcatagaataattaatgtat 133  Q
    ||||||||||||||||||||||||| |||||  ||||||||||||||    
T  28249064 ttataagaaaaagttgactttttagattcattaaataattaatgtat 28249018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 6971503 - 6971576
Alignment:
Q  77 ccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatataga 150  Q
    |||||||||||||||||||| | |||||||||||  || || | ||||||||||||| || || ||||||||||    
T  6971503 ccggtccttattataagaaacaattgactttttaaatttattgtataattaatgtatattgttataaatataga 6971576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 12962722 - 12962767
Alignment:
Q  87 ttataagaaaaagttgactttttaggttcatagaataattaatgta 132  Q
    ||||||||||||||||||||||||| ||||| || |||||||||||    
T  12962722 ttataagaaaaagttgactttttagattcattgagtaattaatgta 12962767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 68 - 137
Target Start/End: Original strand, 36881531 - 36881600
Alignment:
Q  68 ttacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatctta 137  Q
    ||||| |||||||| ||  |||||||||||| |||||||||||| | ||| || ||||||||||||||||    
T  36881531 ttactccctccggttctatttataagaaaaatttgactttttagatacattgagtaattaatgtatctta 36881600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 81 - 145
Target Start/End: Complemental strand, 44283670 - 44283605
Alignment:
Q  81 tccttattataagaaaaagttgactttttaggttcatagaataatt-aatgtatcttattgtaaat 145  Q
    |||||||||||||||| | |||||||||||| ||||| |||||||| |||||||||| || |||||    
T  44283670 tccttattataagaaataattgactttttagattcattgaataattaaatgtatcttgttataaat 44283605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 7943589 - 7943521
Alignment:
Q  69 tacttcctccggtccttattataagaaaaag-ttgactttttaggttcatagaataattaatgtatctt 136  Q
    |||| |||||||||||  ||||||||||||  |||||||||||| ||||| |||||||| |||||||||    
T  7943589 tactccctccggtcctatttataagaaaaaaattgactttttagattcattgaataattgatgtatctt 7943521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 41153260 - 41153196
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtat 133  Q
    |||| |||||| ||||  ||||||||||||||||||||||||| ||||| || ||||| ||||||    
T  41153260 tactccctccgatcctatttataagaaaaagttgactttttagattcattgagtaattgatgtat 41153196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 45034397 - 45034460
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgta 132  Q
    |||| |||||||||||  ||||||||||||||| ||||||||| |||||  ||||||| |||||    
T  45034397 tactacctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgta 45034460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 3365274 - 3365340
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatct 135  Q
    |||| |||| |||| ||||||||||||||| || ||||||||||||||| | |||| | ||||||||    
T  3365274 tactacctctggtctttattataagaaaaatttaactttttaggttcattgtataagtgatgtatct 3365340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 29866231 - 29866165
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatct 135  Q
    |||| |||||||||||  ||| |||| |||||||||||||||||| ||| |||||||  ||||||||    
T  29866231 tactccctccggtcctatttacaagataaagttgactttttaggtacattgaataatgtatgtatct 29866165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 38554601 - 38554544
Alignment:
Q  75 ctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgta 132  Q
    ||||||||||  ||||||||||||||| ||||||||  ||||| || |||||||||||    
T  38554601 ctccggtcctatttataagaaaaagttaactttttaaattcattgagtaattaatgta 38554544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 39063768 - 39063801
Alignment:
Q  194 tcttataataaggaccggagggagtactatattt 227  Q
    ||||||||||||||||||||||||||||| ||||    
T  39063768 tcttataataaggaccggagggagtactacattt 39063801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 150
Target Start/End: Complemental strand, 4410901 - 4410845
Alignment:
Q  94 aaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatataga 150  Q
    |||||||||||||||||| ||||| |  ||||||||||||||| ||  |||||||||    
T  4410901 aaaaagttgactttttagattcattgtgtaattaatgtatcttgtttaaaatataga 4410845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 60 - 214
Target Start/End: Complemental strand, 25773 - 25618
Alignment:
Q  60 tttaaatattacttcctccggtccttattataagaaaaagttgacttttt-aggttcatagaataattaatgtatcttattgtaaatatagactagatgc 158  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||| |    
T  25773 tttaaatgatacttcctccggtccttattataagaaaaagttgacttttttacgttcatagaataattaatgtatcttattataaatatagactagatac 25674  T
Q  159 atcccttatacaatgaaccnnnnnnnttaattgtctcttataataaggaccggagg 214  Q
    ||| |||||| ||| ||||       |||||||| | |||||||||||||||||||    
T  25673 atcacttatataataaaccaaaaaagttaattgttttttataataaggaccggagg 25618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 1e-38; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 84 - 214
Target Start/End: Complemental strand, 45977228 - 45977098
Alignment:
Q  84 ttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaaccnnnnnn 183  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||| | |||||||| ||||          
T  45977228 ttattataagaaaaagttgactttttacgtttatagaataattaatgtatcttattgtaaatatagactagatacatcacctatacaataaaccaaaaaa 45977129  T
Q  184 nttaattgtctcttataataaggaccggagg 214  Q
     |||||||| |||||||||||||||||||||    
T  45977128 gttaattgtttcttataataaggaccggagg 45977098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 64 - 219
Target Start/End: Complemental strand, 52279388 - 52279233
Alignment:
Q  64 aatattacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatccc 163  Q
    |||| |||| |||||| ||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||| ||| |||| |    
T  52279388 aatagtactccctccgatccttattataagaaaaagttgactttttagattcatataataattaatatatcttattgtaaatatagacttgatacatcac 52279289  T
Q  164 ttatacaatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    ||| ||||||||||       | |||||  ||| |||||||||||| |||||||||    
T  52279288 ttacacaatgaaccaaaaaaatcaattgcttctaataataaggaccagagggagta 52279233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 69 - 219
Target Start/End: Original strand, 51590429 - 51590579
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| ||||||||||||||||||| ||| | |||||||||| |||||||||||||||||||||||||| || |||||||||||||||| |||| |||| |    
T  51590429 tactccctccggtccttattataaaaaacaattgacttttttggttcatagaataattaatgtatcttgttataaatatagactagatacatcacttaca 51590528  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    ||||||| |       | || | | ||||||||||||||||||||||||||    
T  51590529 caatgaatctaaaaggtcaactttttcttataataaggaccggagggagta 51590579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 74 - 219
Target Start/End: Complemental strand, 13320447 - 13320302
Alignment:
Q  74 cctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatg 173  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||  || || ||||  ||| |||||     
T  13320447 cctccagtctttattataagaaaaagttgactttttagattcatagaataattaatatatcttattgtaaatatagtttaaatacatcatttacacaata 13320348  T
Q  174 aaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    |||        |||||||| |||||||||||| |||||||||||||    
T  13320347 aacaaaaaaaattaattgtttcttataataagaaccggagggagta 13320302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 83 - 219
Target Start/End: Original strand, 44224283 - 44224418
Alignment:
Q  83 cttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaaccnnnnn 182  Q
    |||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||| ||| |||||||||||         
T  44224283 cttattataaaaaaaa-ttgactttttagattcatagaataattaatgtatcttattgtaaatatagtctagatacatcacttgtacaatgaaccaaaaa 44224381  T
Q  183 nnttaattgtctcttataataaggaccggagggagta 219  Q
      |||||| | | ||||||||||| ||||| ||||||    
T  44224382 aattaattattttttataataagggccggacggagta 44224418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 69 - 216
Target Start/End: Original strand, 15699463 - 15699610
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| |||||||||||||||||||||||   |||| ||||||| ||||| || ||||||||||||||| ||||||||||||||||||| |||| ||||||    
T  15699463 tactccctccggtccttattataagaaacttttgattttttagattcattgagtaattaatgtatcttgttgtaaatatagactagatacatcacttata 15699562  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggaggga 216  Q
    |||| ||||       | |||||| || |||||||||||| |||||||    
T  15699563 caataaacctaaaaattcaattgtttcatataataaggacgggaggga 15699610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 27687978 - 27687840
Alignment:
Q  81 tccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaaccnnn 180  Q
    ||||| |||||||||||| || |||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||| |||| | |||||||        
T  27687978 tccttgttataagaaaaaattaactttttaagtttatagaataattaatgtatcttattgtaaatatagactagatacatcacttacataatgaactaaa 27687879  T
Q  181 nnnnttaattgtctcttataataaggaccggagggagta 219  Q
        | |||| | |||||||||||| |||||||||||||    
T  27687878 aaattcaattatttcttataataagaaccggagggagta 27687840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 29438168 - 29438244
Alignment:
Q  100 ttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaac 176  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||| |||||||||    
T  29438168 ttgactttttaggttcatagaataattaatgtatcttattgaaaatatagactagatacatcacttacacaatgaac 29438244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 69 - 212
Target Start/End: Original strand, 19998410 - 19998553
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| |||||||||||||||||||||||   |||||||||||  ||||| || |||||||| |||||| ||||||||||||||||||| |||| |||| |    
T  19998410 tactccctccggtccttattataagaaacttttgactttttatattcattgagtaattaatatatcttgttgtaaatatagactagatacatcacttaca 19998509  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccgga 212  Q
    ||||||| |       | |||||| |||||||||||||||||||    
T  19998510 caatgaatctaaaaattcaattgtttcttataataaggaccgga 19998553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 91 - 156
Target Start/End: Original strand, 32837657 - 32837722
Alignment:
Q  91 aagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagat 156  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  32837657 aagaaaaagttgactttttaggttcatagaataattaatgtattttattgttaatatagactagat 32837722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 62 - 208
Target Start/End: Original strand, 31050242 - 31050388
Alignment:
Q  62 taaatattacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatc 161  Q
    ||||||||||| |||| ||||||||||||||||||   |||||||||||| ||||| |  |||||||||||| || |||||||||||||||| || ||||    
T  31050242 taaatattactccctctggtccttattataagaaacttttgactttttagattcattgtgtaattaatgtattttgttgtaaatatagactaaatacatc 31050341  T
Q  162 ccttatacaatgaaccnnnnnnnttaattgtctcttataataaggac 208  Q
     |||| ||||| ||||       | |||||| |||||||||||||||    
T  31050342 acttacacaataaacctaaaaagtcaattgtttcttataataaggac 31050388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 69 - 219
Target Start/End: Original strand, 48565526 - 48565676
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||||||||  ||| ||||||||||||| | |||| ||||| |||||||||||||||||| ||||||| || ||||||||||||| || |||| | || |    
T  48565526 tacttcctctagtctttattataagaaataattgatttttttggttcatagaataattaaagtatcttgttataaatatagactaaatacatcacctaca 48565625  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    ||||||||        |||| | | ||||||||||||||||||||||||||    
T  48565626 caatgaacttaaaaagttaactttttcttataataaggaccggagggagta 48565676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 13770741 - 13770811
Alignment:
Q  102 gactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaat 172  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||    
T  13770741 gactatttagattcatagaataattaatgtatcttattgtaaatatagactagatacatcacttacacaat 13770811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 25238722 - 25238649
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgta 142  Q
    |||| ||||| ||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||| |||||    
T  25238722 tactccctcctgtccttattataaaaaacaattgactttttaggttcatagaataattaatgtatcttgttgta 25238649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 74 - 219
Target Start/End: Original strand, 13321718 - 13321863
Alignment:
Q  74 cctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatg 173  Q
    |||||| ||||||||| |||||| | || ||||||| |||| ||| ||||||||||||||||| || |||||||||||||||| |||| |||| | ||||    
T  13321718 cctccgatccttattacaagaaacaattaacttttttggtttataaaataattaatgtatcttgttataaatatagactagatacatcacttacataatg 13321817  T
Q  174 aaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    || |       | || ||| |||||||||||||||| |||||||||    
T  13321818 aatctaaaaaatcaaatgtttcttataataaggaccagagggagta 13321863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 74 - 224
Target Start/End: Complemental strand, 22182909 - 22182759
Alignment:
Q  74 cctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatg 173  Q
    |||||||||||||||||||| || | ||||||||||| |||||| | |||||||||| ||||  || ||||||| | |||||| |||| |||| |||||     
T  22182909 cctccggtccttattataagcaacaattgactttttaagttcattggataattaatgcatctcgttataaatatgggctagatacatcacttacacaata 22182810  T
Q  174 aaccnnnnnnnttaattgtctcttataataaggaccggagggagtactata 224  Q
    || |       | ||||||  ||||||||||||||||||||||||| ||||    
T  22182809 aatctaaaaagtcaattgttacttataataaggaccggagggagtaatata 22182759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 29256749 - 29256685
Alignment:
Q  67 attacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgt 131  Q
    ||||||||||||||||||  ||||||||||||||||||||||||| ||||| || ||||||||||    
T  29256749 attacttcctccggtcctatttataagaaaaagttgactttttagattcattgagtaattaatgt 29256685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 50155447 - 50155383
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtat 133  Q
    ||||||||||||||||  ||||||||||||||||||||||||| ||||| || ||||| ||||||    
T  50155447 tacttcctccggtcctatttataagaaaaagttgactttttagattcattgagtaattgatgtat 50155383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 38040425 - 38040358
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatctt 136  Q
    ||||||||||||||||  |||||||||||| |||||||||||| ||||| || ||||| |||||||||    
T  38040425 tacttcctccggtcctatttataagaaaaatttgactttttagattcattgattaattgatgtatctt 38040358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 12175566 - 12175508
Alignment:
Q  103 actttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatc 161  Q
    ||||||||||||||| ||| |||||||||||||| || |||||||||||||||| ||||    
T  12175566 actttttaggttcattgaacaattaatgtatcttgttataaatatagactagatacatc 12175508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 80 - 219
Target Start/End: Original strand, 18038698 - 18038837
Alignment:
Q  80 gtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaaccnn 179  Q
    ||||||||||||||||| | |||||||||||||||||| |  ||| | ||||||||  || ||||| |||| ||||| |||| |||| |||||||| |      
T  18038698 gtccttattataagaaatatttgactttttaggttcattgcttaagtgatgtatctcgttataaatgtagattagatacatcacttaaacaatgaatcta 18038797  T
Q  180 nnnnnttaattgtctcttataataaggaccggagggagta 219  Q
         | || ||| | ||||||||||||||||||||||||    
T  18038798 aaaagtcaaatgttttttataataaggaccggagggagta 18038837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 48565676 - 48565628
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||| |||||||||||||||||||||||||||| |||||||| ||||||    
T  48565676 tactccctccggtccttattataagaaaaagttaactttttaagttcat 48565628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 51590579 - 51590531
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||| ||||||||||||||||||||||||||||||| |||||| |||||    
T  51590579 tactccctccggtccttattataagaaaaagttgaccttttagattcat 51590531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 26545154 - 26545080
Alignment:
Q  61 ttaaatattacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatct 135  Q
    |||||||||||||||||||||| |  ||| |||| |||||||||||||||| | ||| |||||||  ||||||||    
T  26545154 ttaaatattacttcctccggtcttatttacaagagaaagttgactttttagatacattgaataatgtatgtatct 26545080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 640539 - 640626
Alignment:
Q  87 ttataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaa 175  Q
    |||||||||||| |||||||||||| ||||| || ||||| |||||||||||   |||||||||||| || |||   ||||||||||||    
T  640539 ttataagaaaaaattgactttttagattcat-gagtaattgatgtatcttatctaaaatatagactaaatacataatttatacaatgaa 640626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 34768423 - 34768375
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    ||||| ||||||||  ||||||||| |||||||||||||||||||||||    
T  34768423 tactttctccggtcactattataagcaaaagttgactttttaggttcat 34768375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 49944839 - 49944899
Alignment:
Q  76 tccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatctt 136  Q
    |||||||||  |||||||||||| || ||||||||| ||||| |||||||| |||||||||    
T  49944839 tccggtcctatttataagaaaaatttaactttttagattcattgaataattgatgtatctt 49944899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 126
Target Start/End: Original strand, 18744576 - 18744615
Alignment:
Q  87 ttataagaaaaagttgactttttaggttcatagaataatt 126  Q
    ||||||||||||||||||||||||| ||||| ||||||||    
T  18744576 ttataagaaaaagttgactttttagattcattgaataatt 18744615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 26924212 - 26924275
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgta 132  Q
    |||| |||||||||||  ||||||||||||||||||||||||  ||||| || | |||||||||    
T  26924212 tactccctccggtcctatttataagaaaaagttgactttttaaattcattgagtcattaatgta 26924275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 43929494 - 43929431
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgta 132  Q
    |||| |||||||||||  ||||||||||||||| ||||||||| |||||  ||||||| |||||    
T  43929494 tactacctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgta 43929431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 117
Target Start/End: Original strand, 52030872 - 52030915
Alignment:
Q  74 cctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    ||||||||||||||||||||||||| |||| ||||||| |||||    
T  52030872 cctccggtccttattataagaaaaaattgattttttagtttcat 52030915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 22182760 - 22182806
Alignment:
Q  65 atattacttcctccggtccttattataagaaaaagttgactttttag 111  Q
    |||||||| |||||||||||||||||||| || | ||||||||||||    
T  22182760 atattactccctccggtccttattataagtaacaattgactttttag 22182806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 136
Target Start/End: Complemental strand, 7375600 - 7375551
Alignment:
Q  87 ttataagaaaaagttgactttttaggttcatagaataattaatgtatctt 136  Q
    |||||||||||| |||||||||||| ||||| |  |||||||||||||||    
T  7375600 ttataagaaaaaattgactttttagattcattgtgtaattaatgtatctt 7375551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 34174892 - 34174933
Alignment:
Q  76 tccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||| |||||||||||||||| | ||||||||||||||||||    
T  34174892 tccgatccttattataagaaacaattgactttttaggttcat 34174933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 81 - 153
Target Start/End: Original strand, 2543322 - 2543394
Alignment:
Q  81 tccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagacta 153  Q
    ||||||| ||| |||| | ||||||||| | |||||| ||||||||||| |||||  || |||||||||||||    
T  2543322 tccttataataggaaacaattgacttttcaagttcattgaataattaatttatctcgttataaatatagacta 2543394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 5966873 - 5966921
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||| |||||| ||||||||| |||||| ||||| ||||||||||||||    
T  5966873 tactccctccgatccttattacaagaaacagttggctttttaggttcat 5966921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 9675961 - 9676025
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtat 133  Q
    |||| |||||||||  ||||||||| |||| || |||||||||||||||  ||||| ||||||||    
T  9675961 tactccctccggtcactattataagtaaaaattaactttttaggttcatttaataaataatgtat 9676025  T

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Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 18038837 - 18038789
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||| ||||||||||||||||||| ||| | |||||||||||| |||||    
T  18038837 tactccctccggtccttattataaaaaacatttgactttttagattcat 18038789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 19998560 - 19998512
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||||| ||||||||||||||||||||| | |||| ||||||| |||||    
T  19998560 tacttcatccggtccttattataagaaacaattgaatttttagattcat 19998512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 156
Target Start/End: Original strand, 20486667 - 20486743
Alignment:
Q  80 gtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagat 156  Q
    |||||||||||||||||   |||  ||||||| ||||| | |||||||| ||| ||| |||||||||||| ||||||    
T  20486667 gtccttattataagaaattattgtttttttagattcattgtataattaacgtaacttcttgtaaatataggctagat 20486743  T

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Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 75 - 135
Target Start/End: Complemental strand, 33325476 - 33325416
Alignment:
Q  75 ctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatct 135  Q
    ||||||||||  ||| ||||||||||||||||||||| | ||| |||||||  ||||||||    
T  33325476 ctccggtcctatttacaagaaaaagttgactttttagatacattgaataatgtatgtatct 33325416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 117
Target Start/End: Complemental strand, 52113004 - 52112972
Alignment:
Q  85 tattataagaaaaagttgactttttaggttcat 117  Q
    ||||||||| |||||||||||||||||||||||    
T  52113004 tattataagtaaaagttgactttttaggttcat 52112972  T

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Target: scaffold0059 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 69 - 219
Target Start/End: Complemental strand, 26735 - 26585
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| |||||||||||||||||||||||   |||| ||||||| ||||| || ||||||||||||||| ||||||||||||||||||| |||| |||| |    
T  26735 tactccctccggtccttattataagaaacttttgattttttagattcattgagtaattaatgtatcttgttgtaaatatagactagatacatcacttaca 26636  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
     ||||||||       | |||  | ||||||||||||||||||||||||||    
T  26635 taatgaacctaaaaagtcaatcctttcttataataaggaccggagggagta 26585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 26585 - 26633
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||| |||||||||||||||||||||||   ||||||||||||||||||    
T  26585 tactccctccggtccttattataagaaaggattgactttttaggttcat 26633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 69 - 177
Target Start/End: Complemental strand, 40340 - 40232
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| |||||||||||||||||||||||   |||||||||||| ||||| || |||||||| |||||| ||||||||||||||||||| |||| |||| |    
T  40340 tactccctccggtccttattataagaaacttttgactttttagattcattgagtaattaatatatcttgttgtaaatatagactagatacatcacttaca 40241  T
Q  169 caatgaacc 177  Q
    |||||||||    
T  40240 caatgaacc 40232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 69 - 219
Target Start/End: Complemental strand, 112972 - 112822
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| |||||||||||||  |||||||| | |||||||||||| || || |||||||||||||||||| || |||||||||| ||||| ||||  || ||    
T  112972 tactccctccggtccttaacataagaaacaattgactttttagatttattgaataattaatgtatcttgttataaatatagattagatacatcatttgta 112873  T
Q  169 caatgaaccnnnnnnnttaattgtctcttataataaggaccggagggagta 219  Q
    |||||||||       | |||||| |||||||||||||||| |||||||||    
T  112872 caatgaacctaaaacgtcaattgtttcttataataaggacccgagggagta 112822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 112822 - 112870
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    |||| |||| |||||||||||||||||| | ||||| ||||||||||||    
T  112822 tactccctcgggtccttattataagaaacaattgacgttttaggttcat 112870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 69 - 177
Target Start/End: Original strand, 3808 - 3916
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| ||||||||||||||||||||||| | |||||||||| | ||||| ||||| |||||| ||||  || |||||||||||||||| |||| |||| |    
T  3808 tactccctccggtccttattataagaaacaattgacttttttgattcattgaatacttaatgcatctcgttataaatatagactagatacatcacttaca 3907  T
Q  169 caatgaacc 177  Q
    |||||||||    
T  3908 caatgaacc 3916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 219
Target Start/End: Complemental strand, 3840 - 3808
Alignment:
Q  187 aattgtctcttataataaggaccggagggagta 219  Q
    |||||| ||||||||||||||||||||||||||    
T  3840 aattgtttcttataataaggaccggagggagta 3808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 81 - 153
Target Start/End: Original strand, 19308 - 19377
Alignment:
Q  81 tccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagacta 153  Q
    ||||||||||||||||||||||||||||||| |||||||   ||||||| |||||||||||||||||||||||    
T  19308 tccttattataagaaaaagttgactttttagattcatag---aattaatatatcttattgtaaatatagacta 19377  T

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Target: scaffold0015 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 69 - 168
Target Start/End: Original strand, 17384 - 17483
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttata 168  Q
    |||| ||||||||| |||||||||||||   |||| ||||||| ||||| || ||||||||||||||| | ||||||||||||||||  |||| ||||||    
T  17384 tactccctccggtctttattataagaaacttttgattttttagattcattgagtaattaatgtatcttgtagtaaatatagactagacacatcacttata 17483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 79 - 212
Target Start/End: Original strand, 12755 - 12888
Alignment:
Q  79 ggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaaccn 178  Q
    |||||||||||||||||| | |||||||||||||||||| |  ||| | ||||||||  || ||||| |||||||||| |||| |||| | ||||||||     
T  12755 ggtccttattataagaaatatttgactttttaggttcattgtttaagtgatgtatctcgttataaatgtagactagatacatcacttaaataatgaacct 12854  T
Q  179 nnnnnnttaattgtctcttataataaggaccgga 212  Q
          | || ||| |||||||||||||||||||    
T  12855 aaaaagtcaaatgtttcttataataaggaccgga 12888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 76 - 117
Target Start/End: Complemental strand, 12888 - 12847
Alignment:
Q  76 tccggtccttattataagaaaaagttgactttttaggttcat 117  Q
    ||||||||||||||||||||| | ||||||||||||||||||    
T  12888 tccggtccttattataagaaacatttgactttttaggttcat 12847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 77 - 176
Target Start/End: Complemental strand, 3381 - 3282
Alignment:
Q  77 ccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaac 176  Q
    |||||||||||||||||||| | || |||||||| ||| || ||||||| ||||||| |   | |||||||||||||||| |||| |||| |||||||||    
T  3381 ccggtccttattataagaaacaattaactttttaagttaattgaataatcaatgtatttcgatataaatatagactagatacatcacttacacaatgaac 3282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 175
Target Start/End: Complemental strand, 5549 - 5457
Alignment:
Q  83 cttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatcccttatacaatgaa 175  Q
    |||||||||||||| | |||||||||||| ||||| |||||||||||||||  | |  |||||||||||| ||| | || |||| ||||||||    
T  5549 cttattataagaaataattgactttttagattcattgaataattaatgtatactgtaataaatatagactcgatacttcacttacacaatgaa 5457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 161
Target Start/End: Original strand, 12223 - 12304
Alignment:
Q  80 gtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatgcatc 161  Q
    |||||||||||||||||   |||  ||||||| || || | |||||||| ||||||| |||||||||||| |||||| ||||    
T  12223 gtccttattataagaaattattgtttttttagatttattgtataattaacgtatcttcttgtaaatataggctagatacatc 12304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 156
Target Start/End: Original strand, 7656 - 7732
Alignment:
Q  80 gtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagat 156  Q
    |||||||||||||||||   |||  ||||||| ||||| | |||||||| ||| ||| |||||||||||| ||||||    
T  7656 gtccttattataagaaattattgtttttttagattcattgtataattaacgtaacttcttgtaaatataggctagat 7732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 77344 - 77408
Alignment:
Q  69 tacttcctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtat 133  Q
    |||| |||||||||||  |||||||| ||||||||||||| || | ||| |||||||| ||||||    
T  77344 tactccctccggtcctatttataagagaaagttgacttttcagatacattgaataatttatgtat 77408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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