View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10668_7 (Length: 313)

Name: NF10668_7
Description: NF10668
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10668_7
NF10668_7
[»] chr6 (6 HSPs)
chr6 (18-285)||(32821615-32821881)
chr6 (18-98)||(34913449-34913528)
chr6 (18-107)||(14270663-14270751)
chr6 (18-100)||(5989084-5989166)
chr6 (46-108)||(1454786-1454847)
chr6 (46-108)||(1466478-1466539)
[»] chr1 (3 HSPs)
chr1 (18-98)||(8996344-8996423)
chr1 (46-127)||(15161074-15161154)
chr1 (64-111)||(36080207-36080254)
[»] chr7 (4 HSPs)
chr7 (18-100)||(2477656-2477738)
chr7 (18-110)||(22909108-22909197)
chr7 (18-109)||(3544962-3545055)
chr7 (18-98)||(19063514-19063593)
[»] chr3 (4 HSPs)
chr3 (18-100)||(33247986-33248068)
chr3 (37-106)||(49434089-49434157)
chr3 (46-107)||(2357152-2357212)
chr3 (223-252)||(2356973-2357002)
[»] scaffold0298 (2 HSPs)
scaffold0298 (18-110)||(12284-12373)
scaffold0298 (18-110)||(16054-16143)
[»] scaffold0124 (1 HSPs)
scaffold0124 (18-110)||(12185-12274)
[»] chr2 (4 HSPs)
chr2 (46-111)||(492726-492790)
chr2 (18-109)||(28457959-28458052)
chr2 (18-100)||(36557604-36557686)
chr2 (46-105)||(8687783-8687842)
[»] chr5 (1 HSPs)
chr5 (18-98)||(32226833-32226912)
[»] scaffold0160 (1 HSPs)
scaffold0160 (37-111)||(35384-35456)
[»] chr8 (7 HSPs)
chr8 (18-110)||(13509954-13510043)
chr8 (18-110)||(13599484-13599573)
chr8 (18-98)||(22222749-22222828)
chr8 (18-98)||(22229091-22229170)
chr8 (18-98)||(22233933-22234012)
chr8 (18-98)||(22243326-22243406)
chr8 (46-105)||(11309097-11309156)
[»] scaffold1832 (1 HSPs)
scaffold1832 (18-109)||(52-145)
[»] chr4 (1 HSPs)
chr4 (26-107)||(33110793-33110874)
[»] scaffold0505 (1 HSPs)
scaffold0505 (46-107)||(1094-1154)
[»] scaffold0091 (1 HSPs)
scaffold0091 (46-109)||(14176-14236)


Alignment Details
Target: chr6 (Bit Score: 199; Significance: 1e-108; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 18 - 285
Target Start/End: Complemental strand, 32821881 - 32821615
Alignment:
Q  18 aagattcaatgcctaaatccataatttgtcaacaaatcttgggtttgaatctattcctaacaccttgctttatatttctctctagaaatgccatttctaa 117  Q
    |||||||||||| || |||||| |||| ||||||||||||||||| |||||||||||||| |||||||||||||||||| ||| ||||||||||||||||    
T  32821881 aagattcaatgcatagatccatgatttatcaacaaatcttgggtt-gaatctattcctaataccttgctttatatttctatcttgaaatgccatttctaa 32821783  T
Q  118 aaagtgtgctactctttcttattccaaaacctcatggatctcctttctgccgaaacagtgatactgctctttattccaaaacgtgttatacctcctccnn 217  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||      
T  32821782 aaagtgtgctactctttcttattccaaaacctcatagatctcctttctgccgaaacagtgatactgctctttattccaaaacctgttataccacctcctt 32821683  T
Q  218 nnnnngcaagacctccttctttgtaactctcgggttaaccaatacccaattgggtcaaaggcccattt 285  Q
         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32821682 tttttgcaagacctccttctttgtaactctcgggttaaccaatacccaattgggtcaaaggcccattt 32821615  T

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Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 34913528 - 34913449
Alignment:
Q  18 aagattcaatgcctaaatccataatttgtcaacaaatcttgggtttgaatctattcctaacaccttgctttatatttctct 98  Q
    ||||||||||||||||||||||||| | ||||||||||||||| ||||||||| ||||||||||||||||| | |||||||    
T  34913528 aagattcaatgcctaaatccataatgtctcaacaaatcttggg-ttgaatctactcctaacaccttgctttgtgtttctct 34913449  T

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Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 14270751 - 14270663
Alignment:
Q  18 aagattcaatgcctaaatccataatttgtcaacaaatcttgggtttgaatctattcctaacaccttgctttatatttctctctagaaatg 107  Q
    |||||||| |||||| ||| || || | ||||||||||||||||| ||||||| ||||||||||||||||| | ||||||||||||||||    
T  14270751 aagattcactgcctagatctatgatgtctcaacaaatcttgggtt-gaatctactcctaacaccttgctttgtgtttctctctagaaatg 14270663  T

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Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 5989084 - 5989166
Alignment:
Q  18 aagattcaatgcctaaatccataatttgtcaacaaatcttgggtttgaatctattcctaac-accttgctttatatttctctct 100  Q
    ||||||||||||||| |||||| || | ||||||||||||||| ||||||||| ||||||| |||||||||| | |||||||||    
T  5989084 aagattcaatgcctagatccatgatgtctcaacaaatcttggg-ttgaatctactcctaactaccttgctttgtgtttctctct 5989166  T

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Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 108
Target Start/End: Complemental strand, 1454847 - 1454786
Alignment:
Q  46 tcaacaaatcttgggtttgaatctattcctaacaccttgctttatatttctctctagaaatgc 108  Q
    ||||||||||||||||  ||||||| ||||||||||||||||| | ||||||| |||||||||    
T  1454847 tcaacaaatcttgggta-gaatctactcctaacaccttgctttgtgtttctctatagaaatgc 1454786  T

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Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 108
Target Start/End: Complemental strand, 1466539 - 1466478
Alignment:
Q  46 tcaacaaatcttgggtttgaatctattcctaacaccttgctttatatttctctctagaaatgc 108  Q
    ||||||||||||||||  ||||||| ||||||||||||||||| | ||||||| |||||||||    
T  1466539 tcaacaaatcttgggta-gaatctactcctaacaccttgctttgtgtttctctatagaaatgc 1466478  T

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Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 8996344 - 8996423
Alignment:
Q  18 aagattcaatgcctaaatccataatttgtcaacaaatcttgggtttgaatctattcctaacaccttgctttatatttctct 98  Q
    ||||||||||||||| |||||| || |  |||||||||||||| ||||||||| ||||||||||||||||| | |||||||    
T  8996344 aagattcaatgcctagatccatgatgtcgcaacaaatcttggg-ttgaatctactcctaacaccttgctttgtgtttctct 8996423  T

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Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 15161154 - 15161074
Alignment:
Q  46 tcaacaaatcttgggtttgaatctattcctaacaccttgctttatatttctctctagaaatgccatttctaaaaagtgtgct 127  Q
    |||||||||||||||   ||||||| |||||| | |||||||| | |||||||||||||||||||| || ||||||||||||    
T  15161154 tcaacaaatcttgggaa-gaatctactcctaatatcttgctttgtgtttctctctagaaatgccatctccaaaaagtgtgct 15161074  T

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Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 111
Target Start/End: Complemental strand, 36080254 - 36080207
Alignment:
Q  64 gaatctattcctaacaccttgctttatatttctctctagaaatgccat 111  Q
    ||||||| ||||||||||||||||| | ||||||||||||||||||||    
T  36080254 gaatctactcctaacaccttgctttgtgtttctctctagaaatgccat 36080207  T

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Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 2477738 - 2477656
Alignment:
Q  18 aagattcaatgcctaaatccataatttgtcaacaaatcttgggtttgaatctattcctaac-accttgctttatatttctctct 100  Q
    ||||||||||||||| |||||| || | ||||||||||||||| ||||||||| ||||||| |||||||||| | |||||||||    
T  2477738 aagattcaatgcctagatccatgatgtctcaacaaatcttggg-ttgaatctactcctaactaccttgctttgtgtttctctct 2477656  T

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Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 22909197 - 22909108
Alignment:
Q  18 aagattcaatgcctaaatccataatttgtcaacaaatcttgggtttgaatctattcctaacaccttgctttatatttctctctagaaatgcca 110  Q
    ||||||||||| ||| |||||| || | |||||||||||| | || ||||||| ||||||||||||||||| | ||  |||||||||||||||    
T  22909197 aagattcaatgactagatccatgatgtctcaacaaatcttagatt-gaatctactcctaacaccttgctttgtgtt--tctctagaaatgcca 22909108  T

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Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 3544962 - 3545055
Alignment:
Q  18 aagattcaatgcctaaatccataatttgtcaacaaatcttgggtttgaatctattcctaac-accttgctttatatttctc--tctagaaatgcc 109  Q
    |||||| |||||||| |||||| || | ||||||||||||||||| ||||||| ||||||| ||||| |||| | ||||||  ||||||||||||    
T  3544962 aagatttaatgcctagatccatgatgtctcaacaaatcttgggtt-gaatctactcctaactacctttctttttgtttctctctctagaaatgcc 3545055  T

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Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 19063593 - 19063514
Alignment:
Q  18 aagattcaatgcctaaatccataatttgtcaacaaatcttgggtttgaatctattcctaacaccttgctttatatttctct 98  Q
    |||||||||||| || |||||| || | ||||||||| || |||| ||||||| |||||||||||| |||| | |||||||    
T  19063593 aagattcaatgcttagatccatgatgtctcaacaaattttaggtt-gaatctactcctaacaccttactttgtgtttctct 19063514  T

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Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 33248068 - 33247986
Alignment:
Q  18 aagattcaatgcctaaatccataatttgtcaacaaatcttgggtttgaatctattcctaac-accttgctttatatttctctct 100  Q
    |||||||||||||||||| ||| || | ||||||||||||||| ||||||||| ||||||| |||||||||| | |||||||||    
T  33248068 aagattcaatgcctaaattcatgatgtctcaacaaatcttggg-ttgaatctactcctaactaccttgctttgtgtttctctct 33247986  T

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Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 106
Target Start/End: Complemental strand, 49434157 - 49434089
Alignment:
Q  37 cataatttgtcaacaaatcttgggtttgaatctattcctaacaccttgctttatatttctctctagaaat 106  Q
    |||||| | ||||||||||||||||  ||||||| ||||||||||||||||| | |||||||||||||||    
T  49434157 cataatatctcaacaaatcttgggta-gaatctactcctaacaccttgctttgtgtttctctctagaaat 49434089  T

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Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 107
Target Start/End: Complemental strand, 2357212 - 2357152
Alignment:
Q  46 tcaacaaatcttgggtttgaatctattcctaacaccttgctttatatttctctctagaaatg 107  Q
    ||||||||||||||| ||||||||| |||||||| |||||||| | ||||||| ||||||||    
T  2357212 tcaacaaatcttggg-ttgaatctactcctaacatcttgctttgtgtttctctatagaaatg 2357152  T

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Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 2357002 - 2356973
Alignment:
Q  223 gcaagacctccttctttgtaactctcgggt 252  Q
    ||||||||||||||||||||||||||||||    
T  2357002 gcaagacctccttctttgtaactctcgggt 2356973  T

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Target: scaffold0298 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 12284 - 12373
Alignment:
Q  18 aagattcaatgcctaaatccataatttgtcaacaaatcttgggtttgaatctattcctaacaccttgctttatatttctctctagaaatgcca 110  Q
    ||||||||||||||| || ||| || | |||| |||||||||||| ||||||| ||||||||||||||||| | ||  |||||||||||||||    
T  12284 aagattcaatgcctagattcatgatgtctcaataaatcttgggtt-gaatctactcctaacaccttgctttgtgtt--tctctagaaatgcca 12373  T

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Target: scaffold0298; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 16054 - 16143
Alignment:
Q  18 aagattcaatgcctaaatccataatttgtcaacaaatcttgggtttgaatctattcctaacaccttgctttatatttctctctagaaatgcca 110  Q
    ||||||||||||||| || ||| || | |||| |||||||||||| ||||||| ||||||||||||||||| | ||  |||||||||||||||    
T  16054 aagattcaatgcctagattcatgatgtctcaataaatcttgggtt-gaatctactcctaacaccttgctttgtgtt--tctctagaaatgcca 16143  T

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Target: scaffold0124 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 12274 - 12185
Alignment:
Q  18 aagattcaatgcctaaatccataatttgtcaacaaatcttgggtttgaatctattcctaacaccttgctttatatttctctctagaaatgcca 110  Q
    ||||||||||||||| || ||| || | |||| |||||||||||| ||||||| ||||||||||||||||| | ||  |||||||||||||||    
T  12274 aagattcaatgcctagattcatgatgtctcaataaatcttgggtt-gaatctactcctaacaccttgctttgtgtt--tctctagaaatgcca 12185  T

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Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 111
Target Start/End: Complemental strand, 492790 - 492726
Alignment:
Q  46 tcaacaaatcttgggtttgaatctattcctaacaccttgctttatatttctctctagaaatgccat 111  Q
    ||||||||||||||||  ||||||| ||||||||||||| ||| | ||||||||||||||||||||    
T  492790 tcaacaaatcttgggta-gaatctactcctaacaccttgatttgtgtttctctctagaaatgccat 492726  T

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Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 28457959 - 28458052
Alignment:
Q  18 aagattcaatgcctaaatccataatttgtcaacaaatcttgggtttgaatctattcctaac-accttgctttatatttctc--tctagaaatgcc 109  Q
    ||||||||||||||| |||||| || | | ||||||||||| ||| ||||||| ||||||| |||||||||| | ||||||  ||||||||||||    
T  28457959 aagattcaatgcctagatccatgatgtcttaacaaatcttgagtt-gaatctactcctaactaccttgctttgtgtttctctctctagaaatgcc 28458052  T

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Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 36557604 - 36557686
Alignment:
Q  18 aagattcaatgcctaaatccataatttgtcaacaaatcttgggtttgaatctattcctaac-accttgctttatatttctctct 100  Q
    |||||| |||||||| |||||| || | ||||||||||||||| ||||||||| ||||||| |||||||| | | |||||||||    
T  36557604 aagattaaatgcctagatccatgatgtctcaacaaatcttggg-ttgaatctactcctaactaccttgctatgtgtttctctct 36557686  T

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Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 105
Target Start/End: Original strand, 8687783 - 8687842
Alignment:
Q  46 tcaacaaatcttgggtttgaatctattcctaac-accttgctttatatttctctctagaaa 105  Q
    |||||||||||||| || ||||||| ||||||| |||||||||| | ||||||||||||||    
T  8687783 tcaacaaatcttggctt-gaatctactcctaactaccttgctttgtgtttctctctagaaa 8687842  T

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Target: chr5 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 32226912 - 32226833
Alignment:
Q  18 aagattcaatgcctaaatccataatttgtcaacaaatcttgggtttgaatctattcctaacaccttgctttatatttctct 98  Q
    ||||||||||||||| |||||| || | ||||||||| || |||| ||||||| ||||||||||||||||| | |||||||    
T  32226912 aagattcaatgcctagatccatgatgtctcaacaaattttaggtt-gaatctactcctaacaccttgctttgtgtttctct 32226833  T

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Target: scaffold0160 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 111
Target Start/End: Original strand, 35384 - 35456
Alignment:
Q  37 cataatttgtcaacaaatcttgggtttgaatctattcctaacaccttgctttatatttctctctagaaatgccat 111  Q
    |||||| | ||||||||||||||||  ||||||| ||||||||||||||||| | |||||| |||||||||||||    
T  35384 cataatgtctcaacaaatcttgggta-gaatctactcctaacaccttgctttgtgtttctc-ctagaaatgccat 35456  T

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Target: chr8 (Bit Score: 34; Significance: 0.0000000004; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 13510043 - 13509954
Alignment:
Q  18 aagattcaatgcctaaatccataatttgtcaacaaatcttgggtttgaatctattcctaacaccttgctttatatttctctctagaaatgcca 110  Q
    ||||||||||||||| |||||| || | |||||||||||| || ||||||||| | |||||| |||||||| | ||  |||||||||||||||    
T  13510043 aagattcaatgcctagatccatgatgtctcaacaaatcttagg-ttgaatctacttctaacatcttgctttgtgtt--tctctagaaatgcca 13509954  T

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Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 13599573 - 13599484
Alignment:
Q  18 aagattcaatgcctaaatccataatttgtcaacaaatcttgggtttgaatctattcctaacaccttgctttatatttctctctagaaatgcca 110  Q
    ||||||||||||||| |||||| || | |||||||||||| || ||||||||| | |||||| |||||||| | ||  |||||||||||||||    
T  13599573 aagattcaatgcctagatccatgatgtctcaacaaatcttagg-ttgaatctacttctaacatcttgctttgtgtt--tctctagaaatgcca 13599484  T

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Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 22222749 - 22222828
Alignment:
Q  18 aagattcaatgcctaaatccataatttgtcaacaaatcttgggtttgaatctattcctaacaccttgctttatatttctct 98  Q
    ||||||| ||||||| || ||| || | ||||||||||||||||  ||||||| ||||||||||||||||| | |||||||    
T  22222749 aagattccatgcctagattcatgatgtctcaacaaatcttgggta-gaatctactcctaacaccttgctttgtgtttctct 22222828  T

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Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 22229091 - 22229170
Alignment:
Q  18 aagattcaatgcctaaatccataatttgtcaacaaatcttgggtttgaatctattcctaacaccttgctttatatttctct 98  Q
    ||||||| ||||||| || ||| || | ||||||||||||||||  ||||||| ||||||||||||||||| | |||||||    
T  22229091 aagattccatgcctagattcatgatgtctcaacaaatcttgggta-gaatctactcctaacaccttgctttgtgtttctct 22229170  T

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Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 22233933 - 22234012
Alignment:
Q  18 aagattcaatgcctaaatccataatttgtcaacaaatcttgggtttgaatctattcctaacaccttgctttatatttctct 98  Q
    ||||||| ||||||| || ||| || | ||||||||||||||||  ||||||| ||||||||||||||||| | |||||||    
T  22233933 aagattccatgcctagattcatgatgtctcaacaaatcttgggta-gaatctactcctaacaccttgctttgtgtttctct 22234012  T

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Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 22243326 - 22243406
Alignment:
Q  18 aagattcaatgcctaaatccataatttgtcaacaaatcttgggtttgaatctattcctaac-accttgctttatatttctct 98  Q
    ||||||||||||||| |||||| || | ||||||||||||||| ||||||||| | ||||| |||||| ||| | |||||||    
T  22243326 aagattcaatgcctagatccatgatgtctcaacaaatcttggg-ttgaatctacttctaactaccttgttttgtgtttctct 22243406  T

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Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 105
Target Start/End: Original strand, 11309097 - 11309156
Alignment:
Q  46 tcaacaaatcttgggtttgaatctattcctaac-accttgctttatatttctctctagaaa 105  Q
    |||||||||||||| || ||||||| ||||||| |||||||||| | ||||||||||||||    
T  11309097 tcaacaaatcttggctt-gaatctactcctaactaccttgctttgtgtttctctctagaaa 11309156  T

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Target: scaffold1832 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1832
Description:

Target: scaffold1832; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 52 - 145
Alignment:
Q  18 aagattcaatgcctaaatccataatttgtcaacaaatcttgggtttgaatctattcctaac-accttgctttatatttctc--tctagaaatgcc 109  Q
    ||||||||||||||| |||||| || | ||||||||||||| ||| ||||||| ||| ||| |||||||||| | ||||||  ||||||||||||    
T  52 aagattcaatgcctagatccatgatgtctcaacaaatcttgtgtt-gaatctactcccaactaccttgctttgtctttctctctctagaaatgcc 145  T

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Target: chr4 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 33110793 - 33110874
Alignment:
Q  26 atgcctaaatccataatttgtcaacaaatcttgggtttgaatctattcctaac-accttgctttatatttctctctagaaatg 107  Q
    |||||||||| ||| || | ||||||||||||||| ||||||||| || |||| ||||||| || | ||||||||||||||||    
T  33110793 atgcctaaattcatgatgtctcaacaaatcttggg-ttgaatctactcttaactaccttgccttgtgtttctctctagaaatg 33110874  T

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Target: scaffold0505 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 107
Target Start/End: Original strand, 1094 - 1154
Alignment:
Q  46 tcaacaaatcttgggtttgaatctattcctaacaccttgctttatatttctctctagaaatg 107  Q
    |||||||||||||| |  ||||||| |||||||||||| |||| | ||||||||||||||||    
T  1094 tcaacaaatcttggata-gaatctactcctaacaccttactttgtgtttctctctagaaatg 1154  T

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Target: scaffold0091 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 109
Target Start/End: Complemental strand, 14236 - 14176
Alignment:
Q  46 tcaacaaatcttgggtttgaatctattcctaacaccttgctttatatttctctctagaaatgcc 109  Q
    ||||||||||||| ||| ||||||| ||||||||||||||||  | | ||||||||||||||||    
T  14236 tcaacaaatcttgagtt-gaatctactcctaacaccttgctt--tgtgtctctctagaaatgcc 14176  T

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