View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10669_3 (Length: 329)
Name: NF10669_3
Description: NF10669
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10669_3 |
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Alignment Details
Target: chr4 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 39775727 - 39775429
Alignment:
| Q |
1 |
atcatcagacaagaagattattggtataaatcattttcatgatgatttattcaaaggaactttgttgggttgggtatccaaataatgcagcacaattgca |
100 |
Q |
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| T |
39775727 |
atcatcagacaagaagattattggtataaatcattttcatgatgatttattcaaaggaactttgttgggttgggtatccaaataatgcagcacaattgca |
39775628 |
T |
|
| Q |
101 |
caaacatttcatgtccatcgatccatcaaataaggactaccccacaaaataaaaccattgctattatttttgttttcaatgatcaatccaacaagagaca |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
39775627 |
caaacatttcatgtccatcgatccatcaaataaggactaccccacaaaataaaaccattgctattatttttgttttcaatgatcaatccaacaagggaca |
39775528 |
T |
|
| Q |
201 |
actcaaaatagattgaaaggcattataacgacaagagcatgataccttaaagtagagtacggtcatgcttaattaaacatcgcttgtaagatcaaaatt |
299 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39775527 |
actcaaaatagattgaaaggcattataacgacaagagcatgataccttaaagtagagtacggtcatgcttaattaaacatcgcttgtaagatcaaaatt |
39775429 |
T |
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