View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10670_low_8 (Length: 375)

Name: NF10670_low_8
Description: NF10670
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10670_low_8
NF10670_low_8
[»] chr1 (21 HSPs)
chr1 (6-359)||(8861270-8861623)
chr1 (56-357)||(9124895-9125199)
chr1 (101-335)||(9069469-9069709)
chr1 (101-357)||(9085768-9086027)
chr1 (246-357)||(8978910-8979021)
chr1 (5-198)||(8978690-8978883)
chr1 (253-359)||(8927236-8927342)
chr1 (253-359)||(9337823-9337929)
chr1 (253-359)||(9364682-9364788)
chr1 (101-189)||(8962768-8962856)
chr1 (253-351)||(9378011-9378109)
chr1 (253-359)||(8939662-8939768)
chr1 (253-359)||(9242256-9242362)
chr1 (105-212)||(9097887-9097994)
chr1 (101-159)||(8939871-8939929)
chr1 (107-173)||(9235972-9236038)
chr1 (253-351)||(9236124-9236222)
chr1 (103-173)||(9378195-9378265)
chr1 (101-148)||(8927459-8927506)
chr1 (253-359)||(9300379-9300485)
chr1 (101-150)||(9495781-9495830)
[»] scaffold0690 (1 HSPs)
scaffold0690 (253-359)||(1891-1997)
[»] chr6 (4 HSPs)
chr6 (253-359)||(15910109-15910215)
chr6 (260-302)||(31145374-31145416)
chr6 (260-302)||(31171687-31171729)
chr6 (260-312)||(31201239-31201291)


Alignment Details
Target: chr1 (Bit Score: 326; Significance: 0; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 6 - 359
Target Start/End: Original strand, 8861270 - 8861623
Alignment:
Q  6 tcgagtgagaagaattaggaggcacaattaactcgatatcctctccggcttccaacatttgcacaacattttttattgatggacgatttgtcggttgcca 105  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8861270 tcgagtgaaaaggattaggaggcacaattaactcgatatcctctccggtttccaacatttgcacaacattttttattgatggacgatttatcggttgcca 8861369  T
Q  106 ttgaatgcaccaaagtccaacaattgcaagtttctttgcaattttaagatctccttcatcctcaatatggatacgtatatctccttccaataagttatgg 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8861370 ttgaatgcaccaaagtccaacaattgcaagtttctttgcaattttaagatctccttcatcctcaatatggatacttatatctccttccaataagttatgg 8861469  T
Q  206 atccattctgggtatagcacatgaaaagtttctgcaaacgtgtctacattctttctccctccaaccatttctagcaacaacattccgtaactgtaaatat 305  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8861470 atccattctgggtatagcacatgaaaagtttctgcagacgtgtctacattctttctccctccaaccatttctagcaacaacattccgtaactgtaaatat 8861569  T
Q  306 ctgacttaagagaaacattcccaaaatttcttgatagaacttcaggcgccatgt 359  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8861570 ctgacttaagagacacattcccaaaatttcttgatagaacttcaggcgccatgt 8861623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 56 - 357
Target Start/End: Original strand, 9124895 - 9125199
Alignment:
Q  56 tccaacatttgcacaacattttttattgatggacgatttgtcggttgccattgaatgcaccaaagtccaacaattgcaagtttctttgcaattttaagat 155  Q
    ||||||||||| |  |||  |||||| || ||||||||| | || ||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||    
T  9124895 tccaacatttgtatcacagcttttatggagggacgatttattggctgccattgaatacaccaaagtccaacaattgcgagtttctttgcaattttaatat 9124994  T
Q  156 ctccttcatcctcaatatggatacgtatatctccttccaataagttatggatccattctgggtatagcacatgaaaagtttctgca---aacgtgtctac 252  Q
    |  | ||||| |||||||  ||| || ||||||||||||||| |||||| ||||||||||| ||||  ||||| ||| ||||  ||   || |  |||||    
T  9124995 catcctcatcttcaatatttatatgtgtatctccttccaataggttatgaatccattctggatataaaacatggaaattttcatcagacaaggaatctac 9125094  T
Q  253 attctttctccctccaaccatttctagcaacaacattccgtaactgtaaatatctgacttaagagaaacattcccaaaatttcttgatagaacttcaggc 352  Q
    |||||| |  |||||||||| ||| ||||||||||| || ||||| |||||||| |||||| |||||||||| |||||||||| ||| | |||||||||     
T  9125095 attcttgcgtcctccaaccaattccagcaacaacatcccataactataaatatcagacttacgagaaacatttccaaaatttcgtgacaaaacttcaggt 9125194  T
Q  353 gccat 357  Q
    |||||    
T  9125195 gccat 9125199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 101 - 335
Target Start/End: Original strand, 9069469 - 9069709
Alignment:
Q  101 tgccattgaatgcaccaaagtccaacaattgcaagtttctttgcaattttaagatctcc---ttcatcctcaatatggatacgtatatctccttccaata 197  Q
    ||||| ||||| ||||||||||| ||||||||||||||| |||||||||||  ||  ||   |||||| |||| ||  ||| |||| |||||||||||||    
T  9069469 tgccactgaatacaccaaagtccgacaattgcaagtttccttgcaattttagcattgccaacttcatcttcaacatttatatgtatgtctccttccaata 9069568  T
Q  198 agttatggatccattctgggtatagcacatgaaaagtttctgcaaa---cgtgtctacattctttctccctccaaccatttctagcaacaacattccgta 294  Q
    ||||||| |||||||| |||||||  ||||| |||  ||||||| |   ||  |||||||||||||| ||||||||||||||||||||||||||||| ||    
T  9069569 agttatgaatccattccgggtataaaacatgcaaatcttctgcagatgacgaatctacattctttcttcctccaaccatttctagcaacaacattccata 9069668  T
Q  295 actgtaaatatctgacttaagagaaacattcccaaaatttc 335  Q
    |||||| ||||| ||||||||||||||||| ||||||||||    
T  9069669 actgtatatatcagacttaagagaaacatttccaaaatttc 9069709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 101 - 357
Target Start/End: Original strand, 9085768 - 9086027
Alignment:
Q  101 tgccattgaatgcaccaaagtccaacaattgcaagtttctttgcaattttaagatctccttcatcctcaatatggatacgtatatctccttccaataagt 200  Q
    ||||| ||||||||||||||||| |||||||| |||||||||||||  ||   ||| ||||| || |||||||  |||  ||| |||||||||||||| |    
T  9085768 tgccactgaatgcaccaaagtccgacaattgcgagtttctttgcaaacttcgcatcaccttcgtcttcaatattcatatatatgtctccttccaataaat 9085867  T
Q  201 tatggatccattctgggtatagcacatgaaaagtttctgcaaacgt---gtctacattctttctccctccaaccatttctagcaacaacattccgtaact 297  Q
    |||  ||||||||| ||||||    ||| |||||||||||| | |    |||||||||||| || || |||||||| |||||||||||||| || |||||    
T  9085868 tataaatccattctcggtataaactatggaaagtttctgcagatgatgagtctacattcttccttccaccaaccatctctagcaacaacatcccataact 9085967  T
Q  298 gtaaatatctgacttaagagaaacattcccaaaatttcttgatagaacttcaggcgccat 357  Q
     |||||||| |||||||||||||||||||||||||||| ||| | |||||||||||||||    
T  9085968 ataaatatcagacttaagagaaacattcccaaaatttcgtgacaaaacttcaggcgccat 9086027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 246 - 357
Target Start/End: Original strand, 8978910 - 8979021
Alignment:
Q  246 tgtctacattctttctccctccaaccatttctagcaacaacattccgtaactgtaaatatctgacttaagagaaacattcccaaaatttcttgatagaac 345  Q
    |||||| |||||| || ||| ||||||||||||||||||||||||| || || |||||||| || |||||||| ||||| |||||||||||||| |||||    
T  8978910 tgtctatattcttccttcctgcaaccatttctagcaacaacattccatagctataaatatcagatttaagagacacattaccaaaatttcttgacagaac 8979009  T
Q  346 ttcaggcgccat 357  Q
    |||||| |||||    
T  8979010 ttcaggtgccat 8979021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 5 - 198
Target Start/End: Original strand, 8978690 - 8978883
Alignment:
Q  5 gtcgagtgagaagaattaggaggcacaattaactcgatatcctctccggcttccaacatttgcacaacattttttattgatggacgatttgtcggttgcc 104  Q
    |||| |||| ||| ||||||||||||| |||| | | | || ||||| |  ||||||||||| |  |||  ||| || ||||||||||||   || ||||    
T  8978690 gtcgggtgaaaaggattaggaggcacagttaattggttgtcttctccagtctccaacatttggatgacagatttgatggatggacgatttccggggtgcc 8978789  T
Q  105 attgaatgcaccaaagtccaacaattgcaagtttctttgcaattttaagatctccttcatcctcaatatggatacgtatatctccttccaataa 198  Q
    | |||||||||||||||||||||||||||||||| || |||||||||  ||| |  ||||| ||||| |||||| |||| ||||||||||||||    
T  8978790 actgaatgcaccaaagtccaacaattgcaagttttttggcaattttataatcacactcatcgtcaatgtggatatgtatgtctccttccaataa 8978883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 253 - 359
Target Start/End: Complemental strand, 8927342 - 8927236
Alignment:
Q  253 attctttctccctccaaccatttctagcaacaacattccgtaactgtaaatatctgacttaagagaaacattcccaaaatttcttgatagaacttcaggc 352  Q
    ||||||||| ||||||||||| |||||||||||||| ||||| ||||| ||||| ||||||  ||| ||||||||||| ||||  || | |||||||||     
T  8927342 attctttcttcctccaaccatctctagcaacaacataccgtagctgtatatatcagacttataagagacattcccaaagtttcgagaaaaaacttcaggt 8927243  T
Q  353 gccatgt 359  Q
    |||||||    
T  8927242 gccatgt 8927236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 253 - 359
Target Start/End: Complemental strand, 9337929 - 9337823
Alignment:
Q  253 attctttctccctccaaccatttctagcaacaacattccgtaactgtaaatatctgacttaagagaaacattcccaaaatttcttgatagaacttcaggc 352  Q
    ||||||||| |||||||||||||| | ||| ||||| ||||||||||| ||||| ||||||  ||| ||||| ||||| |||||||| | |||||||||     
T  9337929 attctttcttcctccaaccatttccaacaataacataccgtaactgtatatatcagacttataagagacattaccaaagtttcttgaaaaaacttcaggt 9337830  T
Q  353 gccatgt 359  Q
    |||||||    
T  9337829 gccatgt 9337823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 253 - 359
Target Start/End: Complemental strand, 9364788 - 9364682
Alignment:
Q  253 attctttctccctccaaccatttctagcaacaacattccgtaactgtaaatatctgacttaagagaaacattcccaaaatttcttgatagaacttcaggc 352  Q
    ||||||||| |||||||||||||| | ||| ||||| ||||||||||| ||||| ||||||  ||| ||||| ||||| |||||||| | |||||||||     
T  9364788 attctttcttcctccaaccatttccaacaataacataccgtaactgtatatatcagacttataagagacattaccaaagtttcttgaaaaaacttcaggt 9364689  T
Q  353 gccatgt 359  Q
    |||||||    
T  9364688 gccatgt 9364682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 8962856 - 8962768
Alignment:
Q  101 tgccattgaatgcaccaaagtccaacaattgcaagtttctttgcaattttaagatctccttcatcctcaatatggatacgtatatctcc 189  Q
    ||||| ||||||||||||||||| |||||||| ||||||||||||||| ||  |||||| || || |||||| ||||| ||||||||||    
T  8962856 tgccactgaatgcaccaaagtccgacaattgctagtttctttgcaattctataatctccatcttcatcaatagggatatgtatatctcc 8962768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 253 - 351
Target Start/End: Complemental strand, 9378109 - 9378011
Alignment:
Q  253 attctttctccctccaaccatttctagcaacaacattccgtaactgtaaatatctgacttaagagaaacattcccaaaatttcttgatagaacttcagg 351  Q
    ||||||||| ||||||||||| ||||||||||| |||||||| || |||||||| |||||   ||||||||| || || |||||||| | |||||||||    
T  9378109 attctttctacctccaaccatctctagcaacaatattccgtagctataaatatcagacttgtaagaaacatttccgaagtttcttgagaaaacttcagg 9378011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 253 - 359
Target Start/End: Complemental strand, 8939768 - 8939662
Alignment:
Q  253 attctttctccctccaaccatttctagcaacaacattccgtaactgtaaatatctgacttaagagaaacattcccaaaatttcttgatagaacttcaggc 352  Q
    ||||||||| ||||||||||| || |||| |||||| ||||| ||||| ||||| ||||||  ||| ||||||||||| ||||  || | |||||||||     
T  8939768 attctttcttcctccaaccatctccagcagcaacataccgtagctgtatatatcagacttataagagacattcccaaagtttcgagaaaaaacttcaggt 8939669  T
Q  353 gccatgt 359  Q
    |||||||    
T  8939668 gccatgt 8939662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 253 - 359
Target Start/End: Original strand, 9242256 - 9242362
Alignment:
Q  253 attctttctccctccaaccatttctagcaacaacattccgtaactgtaaatatctgacttaagagaaacattcccaaaatttcttgatagaacttcaggc 352  Q
    ||||||||| ||||||||||| || | ||| ||||| ||||||||||| | ||| ||||||  ||| ||||| ||||||||||| || | |||||||||     
T  9242256 attctttcttcctccaaccatctccaacaataacataccgtaactgtatacatcggacttataagagacatttccaaaatttctagaaaaaacttcaggt 9242355  T
Q  353 gccatgt 359  Q
    |||||||    
T  9242356 gccatgt 9242362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 212
Target Start/End: Original strand, 9097887 - 9097994
Alignment:
Q  105 attgaatgcaccaaagtccaacaattgcaagtttctttgcaattttaagatctccttcatcctcaatatggatacgtatatctccttccaataagttatg 204  Q
    ||||||||||||||||| |  ||||||||||||||||||| | ||||| ||| |||||  | |||||||  |||  ||| ||||||||||||||| | ||    
T  9097887 attgaatgcaccaaagttcggcaattgcaagtttctttgccagtttaacatcaccttccccttcaatatttatatatatgtctccttccaataaggtttg 9097986  T
Q  205 gatccatt 212  Q
     |||||||    
T  9097987 aatccatt 9097994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 159
Target Start/End: Complemental strand, 8939929 - 8939871
Alignment:
Q  101 tgccattgaatgcaccaaagtccaacaattgcaagtttctttgcaattttaagatctcc 159  Q
    ||||| ||||||||||||||||| ||||| || ||||||||||||||| ||| ||||||    
T  8939929 tgccactgaatgcaccaaagtccgacaatcgctagtttctttgcaattctaaaatctcc 8939871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 173
Target Start/End: Original strand, 9235972 - 9236038
Alignment:
Q  107 tgaatgcaccaaagtccaacaattgcaagtttctttgcaattttaagatctccttcatcctcaatat 173  Q
    ||||| ||||||||||| || |  |||||||||||||||||| ||| |||||| |||||||||||||    
T  9235972 tgaatacaccaaagtccgaccagcgcaagtttctttgcaattctaacatctccctcatcctcaatat 9236038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 351
Target Start/End: Original strand, 9236124 - 9236222
Alignment:
Q  253 attctttctccctccaaccatttctagcaacaacattccgtaactgtaaatatctgacttaagagaaacattcccaaaatttcttgatagaacttcagg 351  Q
    ||||||||| || |||||||| || ||||||||||| ||||| || |||||||| ||||||  ||||||||| || || ||||| || | |||||||||    
T  9236124 attctttcttccaccaaccatctcaagcaacaacataccgtagctataaatatcagacttataagaaacatttccgaagtttctcgagaaaacttcagg 9236222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 173
Target Start/End: Complemental strand, 9378265 - 9378195
Alignment:
Q  103 ccattgaatgcaccaaagtccaacaattgcaagtttctttgcaattttaagatctccttcatcctcaatat 173  Q
    ||||||||| ||||||||||| || |  |||||||||||||| ||| ||| |||||| |||||||||||||    
T  9378265 ccattgaatacaccaaagtccgaccagcgcaagtttctttgcgattctaacatctccctcatcctcaatat 9378195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 148
Target Start/End: Complemental strand, 8927506 - 8927459
Alignment:
Q  101 tgccattgaatgcaccaaagtccaacaattgcaagtttctttgcaatt 148  Q
    ||||| ||||||||||||||||| |||||||| ||||| |||||||||    
T  8927506 tgccactgaatgcaccaaagtccgacaattgctagtttttttgcaatt 8927459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 359
Target Start/End: Complemental strand, 9300485 - 9300379
Alignment:
Q  253 attctttctccctccaaccatttctagcaacaacattccgtaactgtaaatatctgacttaagagaaacattcccaaaatttcttgatagaacttcaggc 352  Q
    |||||| || || |||||||| || ||||||||||| || ||||| || ||||| ||||||  ||| ||||||||||| ||||| || | |||||| ||     
T  9300485 attcttccttcccccaaccatctccagcaacaacatgccataactatatatatcggacttataagagacattcccaaagtttctagaaaaaacttcgggt 9300386  T
Q  353 gccatgt 359  Q
    |||||||    
T  9300385 gccatgt 9300379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 9495830 - 9495781
Alignment:
Q  101 tgccattgaatgcaccaaagtccaacaattgcaagtttctttgcaatttt 150  Q
    ||||||||||| |||||||||||| |||| ||||||||||| || |||||    
T  9495830 tgccattgaatacaccaaagtccagcaatcgcaagtttcttcgctatttt 9495781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 253 - 359
Target Start/End: Complemental strand, 1997 - 1891
Alignment:
Q  253 attctttctccctccaaccatttctagcaacaacattccgtaactgtaaatatctgacttaagagaaacattcccaaaatttcttgatagaacttcaggc 352  Q
    ||||||||| ||||||||||| || | ||| ||||| ||||||||||| ||||| ||||||  ||| ||||| ||||||||||| || | |||||||||     
T  1997 attctttcttcctccaaccatctccaacaataacataccgtaactgtatatatcggacttataagagacatttccaaaatttctagaaaaaacttcaggt 1898  T
Q  353 gccatgt 359  Q
    |||||||    
T  1897 gccatgt 1891  T

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Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 253 - 359
Target Start/End: Original strand, 15910109 - 15910215
Alignment:
Q  253 attctttctccctccaaccatttctagcaacaacattccgtaactgtaaatatctgacttaagagaaacattcccaaaatttcttgatagaacttcaggc 352  Q
    ||||||||| ||||||||||| || | ||| ||||| ||||||||||| ||||| ||||||  ||| ||||| ||||||||||| || | |||||||||     
T  15910109 attctttcttcctccaaccatctccaacaataacataccgtaactgtatatatcggacttataagagacatttccaaaatttctagaaaaaacttcaggt 15910208  T
Q  353 gccatgt 359  Q
    |||||||    
T  15910209 gccatgt 15910215  T

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Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 302
Target Start/End: Original strand, 31145374 - 31145416
Alignment:
Q  260 ctccctccaaccatttctagcaacaacattccgtaactgtaaa 302  Q
    ||||||||||||||||||||||||| |||||| ||||| ||||    
T  31145374 ctccctccaaccatttctagcaacatcattccataactataaa 31145416  T

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Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 302
Target Start/End: Original strand, 31171687 - 31171729
Alignment:
Q  260 ctccctccaaccatttctagcaacaacattccgtaactgtaaa 302  Q
    ||||||||||||||||||||||||| |||||| ||||| ||||    
T  31171687 ctccctccaaccatttctagcaacatcattccataactataaa 31171729  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 312
Target Start/End: Original strand, 31201239 - 31201291
Alignment:
Q  260 ctccctccaaccatttctagcaacaacattccgtaactgtaaatatctgactt 312  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||| ||| |||||    
T  31201239 ctccctccaaccatttccagcaacatcattccataactataaacatcggactt 31201291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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